View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19896_high_3 (Length: 550)

Name: NF19896_high_3
Description: NF19896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19896_high_3
NF19896_high_3
[»] chr3 (62 HSPs)
chr3 (309-535)||(52823820-52824046)
chr3 (1-123)||(52824040-52824162)
chr3 (212-309)||(53982008-53982105)
chr3 (212-307)||(33644199-33644294)
chr3 (212-306)||(54868901-54868995)
chr3 (212-306)||(17470405-17470499)
chr3 (212-306)||(49607414-49607508)
chr3 (212-301)||(52629305-52629394)
chr3 (212-306)||(8076393-8076487)
chr3 (212-306)||(27714897-27714991)
chr3 (212-305)||(31456690-31456783)
chr3 (230-306)||(11095377-11095453)
chr3 (212-311)||(26141538-26141637)
chr3 (216-302)||(48587101-48587187)
chr3 (227-306)||(33118872-33118951)
chr3 (224-306)||(24699972-24700054)
chr3 (212-301)||(26754700-26754789)
chr3 (221-306)||(36707439-36707524)
chr3 (212-306)||(47531865-47531959)
chr3 (212-306)||(51419366-51419460)
chr3 (121-182)||(33644324-33644385)
chr3 (212-307)||(30801739-30801834)
chr3 (212-306)||(9562999-9563093)
chr3 (212-306)||(14623845-14623939)
chr3 (212-306)||(35536626-35536720)
chr3 (212-306)||(41189770-41189864)
chr3 (128-182)||(53982135-53982189)
chr3 (121-182)||(48587016-48587077)
chr3 (122-182)||(11095283-11095343)
chr3 (212-307)||(20764921-20765016)
chr3 (212-306)||(11347928-11348022)
chr3 (128-182)||(31456813-31456867)
chr3 (128-182)||(49607538-49607592)
chr3 (212-305)||(13898061-13898154)
chr3 (121-182)||(52629424-52629485)
chr3 (121-182)||(54868810-54868871)
chr3 (212-306)||(8956762-8956856)
chr3 (128-182)||(11347844-11347898)
chr3 (212-306)||(11907371-11907465)
chr3 (216-307)||(45058563-45058653)
chr3 (128-182)||(9563123-9563177)
chr3 (128-182)||(20764837-20764891)
chr3 (128-182)||(26141452-26141506)
chr3 (128-178)||(33118772-33118822)
chr3 (244-306)||(36331416-36331478)
chr3 (128-182)||(36707350-36707404)
chr3 (224-306)||(41080709-41080790)
chr3 (128-176)||(30801655-30801703)
chr3 (128-178)||(35536754-35536804)
chr3 (128-182)||(41189686-41189740)
chr3 (212-306)||(48375712-48375806)
chr3 (128-182)||(51419282-51419336)
chr3 (128-181)||(35965704-35965757)
chr3 (128-176)||(27714825-27714873)
chr3 (238-306)||(35965806-35965874)
chr3 (216-284)||(36331339-36331407)
chr3 (123-182)||(17470529-17470588)
chr3 (128-178)||(8076521-8076571)
chr3 (128-182)||(47531989-47532043)
chr3 (220-301)||(42823116-42823197)
chr3 (128-172)||(26754829-26754873)
chr3 (128-172)||(48375628-48375672)
[»] chr8 (54 HSPs)
chr8 (212-308)||(504127-504223)
chr8 (212-309)||(23122603-23122700)
chr8 (212-308)||(15197331-15197427)
chr8 (212-306)||(12831047-12831141)
chr8 (212-306)||(14547922-14548016)
chr8 (212-316)||(34012302-34012406)
chr8 (212-307)||(40423949-40424044)
chr8 (212-306)||(37038479-37038573)
chr8 (212-306)||(1179946-1180040)
chr8 (212-305)||(5957831-5957924)
chr8 (214-306)||(44507095-44507187)
chr8 (212-306)||(10284637-10284731)
chr8 (212-308)||(43414587-43414683)
chr8 (212-307)||(15048188-15048282)
chr8 (212-287)||(8841438-8841513)
chr8 (212-301)||(10621093-10621182)
chr8 (121-182)||(14548046-14548107)
chr8 (113-182)||(34012203-34012272)
chr8 (128-182)||(504043-504097)
chr8 (216-306)||(16383377-16383467)
chr8 (128-182)||(23122519-23122573)
chr8 (238-311)||(20074966-20075039)
chr8 (122-182)||(42710210-42710270)
chr8 (212-311)||(15258935-15259034)
chr8 (212-306)||(4854869-4854963)
chr8 (212-305)||(9122196-9122279)
chr8 (128-182)||(12831171-12831225)
chr8 (216-306)||(34307216-34307306)
chr8 (217-306)||(17443825-17443914)
chr8 (223-306)||(14055609-14055692)
chr8 (216-311)||(24307803-24307898)
chr8 (128-182)||(9122309-9122363)
chr8 (128-182)||(40423865-40423919)
chr8 (128-182)||(43414503-43414557)
chr8 (119-180)||(15197459-15197520)
chr8 (241-306)||(30479509-30479574)
chr8 (243-306)||(24307629-24307692)
chr8 (128-182)||(1179862-1179916)
chr8 (212-306)||(42221515-42221609)
chr8 (128-178)||(5957958-5958008)
chr8 (128-178)||(8841354-8841404)
chr8 (136-182)||(15048111-15048157)
chr8 (216-306)||(16056411-16056501)
chr8 (128-178)||(37038607-37038657)
chr8 (128-178)||(42354510-42354560)
chr8 (128-182)||(44507010-44507063)
chr8 (241-306)||(32032725-32032789)
chr8 (227-308)||(38229427-38229507)
chr8 (128-182)||(4854785-4854839)
chr8 (128-178)||(10284553-10284603)
chr8 (128-182)||(16056323-16056377)
chr8 (128-182)||(24307715-24307769)
chr8 (217-279)||(29705466-29705527)
chr8 (128-182)||(32707925-32707979)
[»] chr6 (34 HSPs)
chr6 (212-311)||(32869673-32869772)
chr6 (212-308)||(17598552-17598648)
chr6 (212-303)||(22880664-22880755)
chr6 (212-306)||(29857827-29857921)
chr6 (212-306)||(6209471-6209565)
chr6 (212-306)||(11427616-11427712)
chr6 (220-307)||(31109414-31109501)
chr6 (212-306)||(31976248-31976342)
chr6 (112-182)||(29857951-29858021)
chr6 (116-182)||(32869802-32869868)
chr6 (217-306)||(15832577-15832666)
chr6 (123-182)||(11427742-11427801)
chr6 (216-307)||(15508034-15508125)
chr6 (212-303)||(23128133-23128224)
chr6 (216-306)||(15990052-15990142)
chr6 (120-182)||(17598678-17598740)
chr6 (216-306)||(30341370-30341460)
chr6 (212-302)||(28536494-28536582)
chr6 (212-306)||(31110767-31110859)
chr6 (128-182)||(15832701-15832755)
chr6 (122-182)||(22880574-22880634)
chr6 (212-308)||(31953036-31953132)
chr6 (230-305)||(946377-946452)
chr6 (216-307)||(4231547-4231638)
chr6 (128-182)||(31976372-31976426)
chr6 (238-301)||(9379744-9379807)
chr6 (128-182)||(31110683-31110737)
chr6 (241-306)||(22422053-22422118)
chr6 (238-306)||(12732482-12732550)
chr6 (123-182)||(23128043-23128103)
chr6 (123-182)||(6209383-6209441)
chr6 (128-182)||(4231672-4231726)
chr6 (128-170)||(22422001-22422043)
chr6 (128-178)||(31952952-31953002)
[»] chr7 (63 HSPs)
chr7 (212-306)||(4999520-4999614)
chr7 (212-308)||(19329840-19329936)
chr7 (212-311)||(7389384-7389483)
chr7 (212-303)||(3783998-3784089)
chr7 (212-307)||(38267039-38267134)
chr7 (212-306)||(8080389-8080483)
chr7 (212-306)||(36361919-36362013)
chr7 (212-308)||(35137531-35137627)
chr7 (212-306)||(3434562-3434656)
chr7 (212-306)||(19436193-19436287)
chr7 (212-306)||(36362026-36362120)
chr7 (212-306)||(38837217-38837311)
chr7 (212-306)||(40957707-40957801)
chr7 (212-305)||(32951499-32951592)
chr7 (212-308)||(3694365-3694461)
chr7 (212-306)||(46374808-46374902)
chr7 (216-308)||(8238210-8238303)
chr7 (121-182)||(19329966-19330027)
chr7 (212-308)||(21234399-21234495)
chr7 (123-178)||(8080300-8080355)
chr7 (128-182)||(3434676-3434730)
chr7 (240-306)||(10343597-10343663)
chr7 (212-306)||(18207180-18207273)
chr7 (212-306)||(36208173-36208267)
chr7 (216-306)||(38044197-38044287)
chr7 (212-301)||(35522881-35522970)
chr7 (121-182)||(38837341-38837402)
chr7 (123-182)||(4999431-4999490)
chr7 (216-306)||(22343361-22343451)
chr7 (216-306)||(41915741-41915831)
chr7 (245-306)||(35468894-35468955)
chr7 (214-307)||(41423681-41423774)
chr7 (122-182)||(36362138-36362198)
chr7 (122-182)||(40957831-40957891)
chr7 (214-306)||(46033809-46033901)
chr7 (216-306)||(11044188-11044268)
chr7 (123-182)||(32951410-32951469)
chr7 (216-307)||(39255934-39256024)
chr7 (216-306)||(7727906-7727996)
chr7 (128-182)||(46374746-46374800)
chr7 (133-182)||(19436114-19436163)
chr7 (217-306)||(40846124-40846213)
chr7 (122-182)||(7389513-7389572)
chr7 (123-182)||(36361842-36361901)
chr7 (241-307)||(32564461-32564527)
chr7 (128-182)||(35523000-35523054)
chr7 (128-182)||(46033723-46033777)
chr7 (224-301)||(2318261-2318338)
chr7 (123-182)||(11044302-11044361)
chr7 (215-306)||(26296644-26296735)
chr7 (128-182)||(2318163-2318217)
chr7 (128-182)||(16374746-16374800)
chr7 (128-182)||(21234525-21234579)
chr7 (250-308)||(31735882-31735940)
chr7 (136-182)||(31736001-31736047)
chr7 (128-178)||(41423810-41423860)
chr7 (212-265)||(16374830-16374883)
chr7 (123-182)||(35137657-35137716)
chr7 (217-279)||(26898337-26898398)
chr7 (128-182)||(38044321-38044375)
chr7 (128-169)||(12311041-12311082)
chr7 (128-169)||(39255846-39255887)
chr7 (212-272)||(27744315-27744375)
[»] chr4 (55 HSPs)
chr4 (212-306)||(41236347-41236441)
chr4 (212-307)||(11511468-11511563)
chr4 (212-306)||(48183055-48183149)
chr4 (212-306)||(50052434-50052528)
chr4 (212-307)||(6034043-6034138)
chr4 (212-307)||(54473539-54473634)
chr4 (212-306)||(480453-480547)
chr4 (212-306)||(29234251-29234345)
chr4 (212-306)||(24995113-24995207)
chr4 (212-306)||(29239886-29239980)
chr4 (212-306)||(42044373-42044467)
chr4 (212-308)||(3481652-3481748)
chr4 (212-306)||(23608235-23608329)
chr4 (213-307)||(50526178-50526272)
chr4 (212-307)||(31910191-31910286)
chr4 (123-182)||(41236471-41236530)
chr4 (123-181)||(24995024-24995082)
chr4 (212-306)||(29977885-29977979)
chr4 (239-308)||(40574777-40574846)
chr4 (121-182)||(42044282-42044343)
chr4 (128-181)||(48182971-48183024)
chr4 (214-301)||(53352574-53352660)
chr4 (128-182)||(6034168-6034222)
chr4 (216-306)||(19670726-19670816)
chr4 (212-262)||(41823926-41823976)
chr4 (241-306)||(55079749-55079814)
chr4 (241-306)||(55475191-55475256)
chr4 (212-298)||(28480274-28480360)
chr4 (212-298)||(28481149-28481235)
chr4 (212-298)||(28482024-28482110)
chr4 (128-178)||(29240014-29240064)
chr4 (216-306)||(47986208-47986298)
chr4 (212-306)||(48647732-48647826)
chr4 (216-306)||(50813902-50813992)
chr4 (216-288)||(17983753-17983825)
chr4 (122-182)||(23608359-23608419)
chr4 (241-311)||(29547994-29548064)
chr4 (216-306)||(32766958-32767048)
chr4 (128-182)||(54473455-54473509)
chr4 (238-306)||(47104544-47104612)
chr4 (128-171)||(50052350-50052393)
chr4 (128-171)||(53352496-53352539)
chr4 (220-306)||(8343177-8343263)
chr4 (123-181)||(11511380-11511437)
chr4 (241-315)||(18924530-18924604)
chr4 (128-182)||(31910316-31910370)
chr4 (128-182)||(41824006-41824060)
chr4 (128-178)||(50526093-50526143)
chr4 (243-298)||(29589777-29589831)
chr4 (136-175)||(40574910-40574949)
chr4 (128-182)||(19670638-19670692)
chr4 (128-182)||(29547881-29547935)
chr4 (128-182)||(55475315-55475369)
chr4 (141-182)||(480382-480423)
chr4 (241-306)||(44536781-44536845)
[»] chr2 (57 HSPs)
chr2 (212-306)||(7465741-7465835)
chr2 (212-306)||(10249388-10249482)
chr2 (212-306)||(17473020-17473114)
chr2 (212-306)||(32505654-32505748)
chr2 (212-311)||(28381661-28381760)
chr2 (212-303)||(28863458-28863549)
chr2 (212-307)||(40701477-40701572)
chr2 (212-306)||(9058480-9058574)
chr2 (212-306)||(33436106-33436200)
chr2 (212-308)||(13438341-13438437)
chr2 (212-306)||(5574494-5574588)
chr2 (212-306)||(30915463-30915557)
chr2 (212-308)||(19930826-19930922)
chr2 (212-308)||(27864702-27864798)
chr2 (212-307)||(4060684-4060779)
chr2 (212-308)||(40613908-40614004)
chr2 (212-306)||(20700815-20700909)
chr2 (223-306)||(38882831-38882913)
chr2 (212-306)||(38273148-38273242)
chr2 (238-306)||(33436211-33436279)
chr2 (120-182)||(7465649-7465711)
chr2 (212-306)||(26891510-26891604)
chr2 (212-306)||(42257193-42257287)
chr2 (212-306)||(2533124-2533217)
chr2 (128-182)||(5574422-5574476)
chr2 (128-182)||(10249304-10249358)
chr2 (128-182)||(13438467-13438521)
chr2 (128-182)||(17473144-17473198)
chr2 (128-182)||(28863579-28863633)
chr2 (121-182)||(19930735-19930796)
chr2 (214-306)||(36168836-36168928)
chr2 (216-308)||(43490119-43490211)
chr2 (212-307)||(17820010-17820105)
chr2 (128-178)||(20700943-20700993)
chr2 (128-182)||(38882733-38882787)
chr2 (223-305)||(41575138-41575220)
chr2 (128-181)||(32505570-32505623)
chr2 (128-181)||(40613824-40613877)
chr2 (212-300)||(3439985-3440073)
chr2 (123-175)||(28381572-28381624)
chr2 (123-182)||(40701602-40701661)
chr2 (216-306)||(38732354-38732444)
chr2 (216-288)||(2997497-2997569)
chr2 (212-263)||(3737986-3738037)
chr2 (123-182)||(4060809-4060868)
chr2 (123-182)||(27864815-27864874)
chr2 (128-182)||(9058604-9058658)
chr2 (216-290)||(13365369-13365443)
chr2 (128-182)||(30915587-30915641)
chr2 (128-182)||(33436022-33436076)
chr2 (216-306)||(45097745-45097835)
chr2 (140-180)||(2533249-2533289)
chr2 (128-182)||(36168960-36169014)
chr2 (133-182)||(42257317-42257366)
chr2 (128-172)||(3440113-3440157)
chr2 (128-175)||(17823919-17823966)
chr2 (283-311)||(28863614-28863642)
[»] chr1 (54 HSPs)
chr1 (212-306)||(2581915-2582009)
chr1 (212-309)||(27564741-27564838)
chr1 (212-307)||(9474882-9474977)
chr1 (212-307)||(48716288-48716383)
chr1 (212-306)||(38632327-38632421)
chr1 (212-306)||(3000319-3000413)
chr1 (212-308)||(47452326-47452422)
chr1 (212-306)||(8346394-8346488)
chr1 (212-306)||(38595154-38595248)
chr1 (212-306)||(51898689-51898783)
chr1 (212-303)||(44548382-44548473)
chr1 (212-306)||(41758805-41758899)
chr1 (212-306)||(50630458-50630552)
chr1 (212-306)||(32813247-32813341)
chr1 (212-306)||(43132-43226)
chr1 (212-308)||(37649196-37649292)
chr1 (213-305)||(11152385-11152476)
chr1 (123-182)||(27564652-27564711)
chr1 (216-306)||(5959010-5959100)
chr1 (128-182)||(37649322-37649376)
chr1 (128-182)||(48716204-48716258)
chr1 (212-276)||(13414791-13414855)
chr1 (216-303)||(26274435-26274522)
chr1 (216-307)||(50591010-50591101)
chr1 (128-182)||(41758929-41758983)
chr1 (212-308)||(26440732-26440828)
chr1 (212-316)||(45044566-45044670)
chr1 (212-306)||(49811533-49811627)
chr1 (212-301)||(44453984-44454073)
chr1 (122-182)||(9474792-9474852)
chr1 (138-182)||(38632253-38632297)
chr1 (123-182)||(26274553-26274612)
chr1 (212-306)||(23597097-23597191)
chr1 (128-182)||(32813371-32813425)
chr1 (128-178)||(47452242-47452292)
chr1 (123-182)||(43256-43315)
chr1 (212-311)||(3302539-3302638)
chr1 (216-307)||(41608503-41608594)
chr1 (216-306)||(37926448-37926538)
chr1 (128-182)||(50630582-50630636)
chr1 (212-308)||(6260868-6260964)
chr1 (123-175)||(38595285-38595337)
chr1 (123-182)||(2582039-2582098)
chr1 (128-175)||(3000450-3000497)
chr1 (212-263)||(48489343-48489394)
chr1 (128-182)||(49811449-49811503)
chr1 (128-178)||(51898605-51898655)
chr1 (212-265)||(44334176-44334229)
chr1 (216-308)||(47748441-47748532)
chr1 (238-301)||(34340071-34340133)
chr1 (217-279)||(750240-750301)
chr1 (128-182)||(8346309-8346363)
chr1 (136-182)||(37926368-37926414)
chr1 (128-182)||(45044482-45044536)
[»] chr5 (43 HSPs)
chr5 (212-303)||(18520890-18520981)
chr5 (212-309)||(40145404-40145501)
chr5 (212-316)||(33149644-33149748)
chr5 (212-307)||(35785198-35785293)
chr5 (212-306)||(2740274-2740368)
chr5 (212-306)||(13811652-13811746)
chr5 (212-306)||(36732948-36733042)
chr5 (212-308)||(14831812-14831908)
chr5 (212-308)||(42414308-42414404)
chr5 (212-308)||(28177773-28177869)
chr5 (212-306)||(6679698-6679792)
chr5 (212-306)||(35943898-35943992)
chr5 (212-306)||(15409616-15409710)
chr5 (114-182)||(2740398-2740467)
chr5 (113-182)||(33149545-33149614)
chr5 (119-182)||(14831938-14832001)
chr5 (212-307)||(26720515-26720610)
chr5 (212-307)||(26990264-26990359)
chr5 (216-306)||(3921275-3921365)
chr5 (212-306)||(31008988-31009082)
chr5 (247-305)||(36875644-36875702)
chr5 (215-306)||(41470425-41470516)
chr5 (216-306)||(2252178-2252268)
chr5 (128-182)||(35785323-35785377)
chr5 (122-182)||(18520800-18520860)
chr5 (212-306)||(20073522-20073616)
chr5 (136-182)||(36732872-36732918)
chr5 (121-182)||(40145531-40145592)
chr5 (214-258)||(31132392-31132436)
chr5 (132-182)||(13811776-13811826)
chr5 (128-182)||(15409532-15409586)
chr5 (128-178)||(31009116-31009166)
chr5 (128-182)||(31132458-31132512)
chr5 (121-170)||(16115247-16115296)
chr5 (238-306)||(33825356-33825424)
chr5 (243-311)||(39688934-39689002)
chr5 (212-307)||(6260007-6260102)
chr5 (243-301)||(10356639-10356698)
chr5 (212-262)||(21370048-21370098)
chr5 (128-178)||(35943814-35943864)
chr5 (212-306)||(38296203-38296297)
chr5 (212-305)||(16327902-16327995)
chr5 (223-275)||(39557534-39557586)
[»] scaffold0237 (2 HSPs)
scaffold0237 (212-306)||(4029-4123)
scaffold0237 (121-182)||(4153-4214)
[»] scaffold1268 (2 HSPs)
scaffold1268 (212-308)||(935-1031)
scaffold1268 (128-178)||(851-901)
[»] scaffold1267 (2 HSPs)
scaffold1267 (212-308)||(935-1031)
scaffold1267 (128-178)||(851-901)
[»] scaffold0321 (2 HSPs)
scaffold0321 (212-306)||(10115-10209)
scaffold0321 (122-182)||(10025-10085)
[»] scaffold0110 (2 HSPs)
scaffold0110 (216-307)||(8873-8964)
scaffold0110 (128-175)||(8785-8832)
[»] scaffold0018 (1 HSPs)
scaffold0018 (217-290)||(152514-152587)
[»] scaffold0316 (2 HSPs)
scaffold0316 (212-263)||(17097-17148)
scaffold0316 (128-171)||(17238-17281)


Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 309 - 535
Target Start/End: Complemental strand, 52824046 - 52823820
Alignment:
Q  309 aaacaaaacctcttctttcctacaaacaaagaaacaaatccaatgtatcattattataataaattcatgagttgatatagttaaatgaaattaatactat 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824046 aaacaaaacctcttctttcctacaaacaaagaaacaaatccaatgtatcattattataataaattcatgagttgatatagttaaatgaaattaatactat 52823947  T
Q  409 atagtctctttctatatataacaagtttagtatgcataaatattggagagaattacgaggcaaatatcgcagagagggaaatggttgggagaattagggt 508  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52823946 atagtctctttctatatataacaagattagtatacataaatattggagagaattacgaggcaaatatcgcagagagggaaatggttgggagaattagggt 52823847  T
Q  509 ggtcgagagagaagcgacggtgtttgg 535  Q
    |||||||||||||||||||||||||||    
T  52823846 ggtcgagagagaagcgacggtgtttgg 52823820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 52824162 - 52824040
Alignment:
Q  1 agagtgcagcttgatcccacttagaagaaacctattatgcttcttggtgtgttcgttgacaccatgaaccttcaaatcacactctttgcacacaatcgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52824162 agagtgcagcttgatcccacttagaagaaacctattatgcttcttggtgtgttcgttgacaccgtgaaccttcaaatcacactctttgcacacaatcgct 52824063  T
Q  101 ctatcttcctgacaataaacaaa 123  Q
    ||||||||||||||| |||||||    
T  52824062 ctatcttcctgacaaaaaacaaa 52824040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 53982105 - 53982008
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcata 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  53982105 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcata 53982008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 33644294 - 33644199
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||    
T  33644294 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 54868901 - 54868995
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54868901 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 17470499 - 17470405
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  17470499 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 49607508 - 49607414
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  49607508 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 52629394 - 52629305
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  52629394 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 8076487 - 8076393
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||||||    
T  8076487 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 27714897 - 27714991
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||| |||||||||||||||||||||    
T  27714897 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 31456783 - 31456690
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||||    
T  31456783 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 11095377 - 11095453
Alignment:
Q  230 acgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 26141538 - 26141637
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| |||||||||    
T  26141538 tgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactcataaa 26141637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 48587101 - 48587187
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatt 302  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||| |||||||||||||    
T  48587101 cttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 33118872 - 33118951
Alignment:
Q  227 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||||    
T  33118872 tccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 24699972 - 24700054
Alignment:
Q  224 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||| | ||||| ||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  24699972 gggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 26754789 - 26754700
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||| |||| || |||||||||||| ||||||||||||||| |||||    
T  26754789 tgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 36707439 - 36707524
Alignment:
Q  221 gcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||| || |||||||| |||||||||||||||||    
T  36707439 gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 47531959 - 47531865
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||| ||  || | |||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  47531959 tgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 51419366 - 51419460
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||||||| ||| | ||||||| ||||||||| |||||||||||||| ||||    
T  51419366 tgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 33644385 - 33644324
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33644385 aaagagtaatgatacatagacaccctttattcccatacacccttatacaccccatgcattag 33644324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 30801739 - 30801834
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||| ||||||||  ||||||| ||||| |||||||||||||| ||||| ||||||||  || |||||||||||||||||||||| ||||    
T  30801739 tgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcattgctca 30801834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 9563093 - 9562999
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||| |||||| || |||||||||||||||||||||||||| | ||| ||||||| | ||||||| ||||||| ||||| |||||||||||||||    
T  9563093 tgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 14623845 - 14623939
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| | ||||||| |||  || |||||||||||| ||||||||||||  |||||||||||| |||||| |||||||||||||||||||    
T  14623845 tgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 35536720 - 35536626
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||   ||||||| |||| |||||||| |||||| ||||||||||||| ||||||||||||  ||||| |||||||||||||||||||    
T  35536720 tgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 41189770 - 41189864
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||| ||| | |||||||| |||||| ||||||||||||| | |||||||||| |||||| ||| |||||||||| ||||    
T  41189770 tgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 53982189 - 53982135
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattag 53982135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 48587016 - 48587077
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  48587016 aaagagtaatgatacatagacaccctttattcccatatacccttgtacatcccatgcattag 48587077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 11095283 - 11095343
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  11095283 aagagtaatgatacatagacaccctttattctcatacacccttgtacacccgatgcattag 11095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 20764921 - 20765016
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||| ||||||||| ||| | ||||||||||||||||||||||||| |||  ||||||| ||| |||||| ||||||||| |||| |||||    
T  20764921 tgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactca 20765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 11347928 - 11348022
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||| ||| ||||||| ||| | ||||||||||||||||||||| ||||||| | ||||||| || |||||| |||||||||||||| ||||    
T  11347928 tgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 31456867 - 31456813
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattag 31456813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 49607592 - 49607538
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattag 49607538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 13898061 - 13898154
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    |||||||||| | ||||||| |||  ||||||||||||||| ||||||||||||  |||||||||||| |||||| ||| ||| ||||||||||    
T  13898061 tgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 52629485 - 52629424
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  52629485 aaagagtaatgatacatagacacccattatttccatacacccttgtacatcccatgcattag 52629424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 54868810 - 54868871
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  54868810 aaagagtaatgatacatagacaccttttatttccatacacccttgtacaccctatgcattag 54868871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 8956856 - 8956762
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||   ||||||| |||  |||||||| |||||| ||||||||||||| | ||||||||||  ||||| |||||||||||||||||||    
T  8956856 tgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 11347844 - 11347898
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11347844 aatggtacatagacaccctttattcccatacacccttatacaccccatacattag 11347898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 11907465 - 11907371
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||  |||| || ||||||||||||||||| ||||  |   |||||||| || ||||||||||||||||||||| ||||    
T  11907465 tgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 307
Target Start/End: Original strand, 45058563 - 45058653
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||||  ||   || |||||||||||| ||||||||||||  |||||||||||| |||||||||| |||||||||| |||||    
T  45058563 cttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaag-ggtgtattgccacctaagggtgtttatgtatcataactca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 9563177 - 9563123
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||| |||||||||||||||||||| ||||||| | ||||||||||    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattag 9563123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 20764837 - 20764891
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  20764837 aatgttacatagacaccatttattctcatacacccttgtacaccccatacattag 20764891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 26141452 - 26141506
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  26141452 aatgttacatagacaccctttatttccatacactcttgtacaccccatacattag 26141506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 33118772 - 33118822
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  33118772 aatgttacgtagacaccctttatttccatacacccttgtacaccccatgca 33118822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 36331416 - 36331478
Alignment:
Q  244 cagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||||| |||||||||| ||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactc 36331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 36707350 - 36707404
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattag 36707404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 41080790 - 41080709
Alignment:
Q  224 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||| |||| || | ||||||||||| |||||||||||| ||||| |||| | |||||| |||||||||||||||||||    
T  41080790 gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 30801655 - 30801703
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatg 176  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  30801655 aatgttacatagacaccttttattctcatacacccttgtacaccccatg 30801703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 35536804 - 35536754
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  35536804 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 35536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 41189686 - 41189740
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||||| |||||||| ||||||||| |||| ||||||    
T  41189686 aatgttacatagacaccctttatttccatacactcttgtacactccatacattag 41189740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 48375712 - 48375806
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||| ||||| ||  ||||||||||||| ||| | |  |  ||||||||| || ||||||||||||||| ||||| ||||    
T  48375712 tgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 51419282 - 51419336
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||| ||||||    
T  51419282 aatgttacataaacaccttttatttccatacacccttgtacaccccatacattag 51419336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 35965704 - 35965757
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 181  Q
    |||| |||||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  35965704 aatgttacatagacaccttttattctcatacacccttgtacacctcatgaatta 35965757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 27714825 - 27714873
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatg 176  Q
    ||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  27714825 aatgatacatatacactctttattctcgtacacccttgtacaccccatg 27714873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 35965806 - 35965874
Alignment:
Q  238 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||| ||||||||||||| | ||||||  ||  ||||| ||| |||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 36331339 - 36331407
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaa 284  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||| ||||||| ||||    
T  36331339 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 17470588 - 17470529
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||| ||||||| ||||||   ||||||| ||||||||||||    
T  17470588 agagtaatgatacatagacaccatttattctcatacatatttgtacatcccatgcattag 17470529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 8076571 - 8076521
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||| ||||||| |||||||  ||||||||||||||||    
T  8076571 aatgttacatagacaccatttattctcatacacttttgtacaccccatgca 8076521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 47532043 - 47531989
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||| ||||||||||||||||||||| ||||||||  |||| ||||||    
T  47532043 aatgttacataaacaccctttattcccatacacacttgtacattccatacattag 47531989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 42823197 - 42823116
Alignment:
Q  220 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    |||||||||||  |||| || ||||| |||||| ||||||||||||  |||||||| |||  ||| ||||| ||||||||||    
T  42823197 tgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 26754873 - 26754829
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccc 172  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  26754873 aatgttacatagacactctttatttccatacacctttgtacaccc 26754829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 48375628 - 48375672
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccc 172  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||||    
T  48375628 aatgttacatagacaccctttatttccatacatctttgtacaccc 48375672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 504127 - 504223
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  504127 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcat 504223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 23122603 - 23122700
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcata 309  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  23122603 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactcata 23122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 15197427 - 15197331
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  15197427 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 12831141 - 12831047
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  12831141 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 14548016 - 14547922
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  14548016 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 34012302 - 34012406
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  34012302 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcataaa 34012401  T
Q  312 caaaa 316  Q
     ||||    
T  34012402 aaaaa 34012406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 40423949 - 40424044
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  40423949 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 37038573 - 37038479
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||    
T  37038573 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 1179946 - 1180040
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  1179946 tgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 5957924 - 5957831
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||  ||||||||||||||||||    
T  5957924 tgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 44507095 - 44507187
Alignment:
Q  214 tgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||| ||||||||||||||||||||||||||    
T  44507095 tgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 10284637 - 10284731
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||  |||||||||||||||||||| ||||    
T  10284637 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 43414587 - 43414683
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||| |||| ||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||    
T  43414587 tgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactcat 43414683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 15048188 - 15048282
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||||||||| |||||    
T  15048188 tgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 8841438 - 8841513
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaaggg 287  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||    
T  8841438 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 10621093 - 10621182
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    |||||||||||||| || | ||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||    
T  10621093 tgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 14548107 - 14548046
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14548107 aaagagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 14548046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 34012203 - 34012272
Alignment:
Q  113 caataaacaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  34012203 caataaaaaaagagtaatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattag 34012272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 504043 - 504097
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 504097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 16383467 - 16383377
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  16383467 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 23122519 - 23122573
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 23122573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 20074966 - 20075039
Alignment:
Q  238 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||| |||||| |||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactcataaa 20075039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 42710210 - 42710270
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  42710210 aagagtaatgatacacagacaccctttattcccatacacccttgtacaccccatacattag 42710270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 15258935 - 15259034
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    ||||||||||| ||||||||||||| || |||||||||||| ||||| |||| |  | |||||||||||||||| || |||||||||||| |||| ||||    
T  15258935 tgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactcttaaa 15259034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 4854869 - 4854963
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||| ||||||| ||| | || | |||||||||| ||| ||||| ||| |||||||||||| |||||| |||||||||||||||||||    
T  4854869 tgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 9122279 - 9122196
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||          ||||||||||| |||||||||||||||||||||||||    
T  9122279 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgg----------gtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 12831225 - 12831171
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattag 12831171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 34307306 - 34307216
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||| ||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  34307306 cttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 17443914 - 17443825
Alignment:
Q  217 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| |||| || | |||||||| || |||||| |||||||||||||| ||||    
T  17443914 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 14055609 - 14055692
Alignment:
Q  223 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||   |||||||| || ||||||||||| ||||||||| ||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 24307803 - 24307898
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||||||||||  || | || | |||||||||||||||||||||||  | |||||||||| |||||||||| |||||||||| |||| ||||    
T  24307803 cttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactcttaaa 24307898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 9122363 - 9122309
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattag 9122309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 40423865 - 40423919
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  40423865 aatgatacatagacaccttttattcccatacacccttgtacacctcatgtattag 40423919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 43414503 - 43414557
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  43414503 aatgttacatagacaccctttattgccatacacccttgtacaccccatacattag 43414557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 15197520 - 15197459
Alignment:
Q  119 acaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcatt 180  Q
    |||| ||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  15197520 acaacgagtaatgatacatagacactttttattcccatacacccttgtacacctcatgcatt 15197459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 30479509 - 30479574
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||| ||||| ||||||| |||||||||||| |||||||||| |||||||||| ||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 24307692 - 24307629
Alignment:
Q  243 tcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||  | |||||||||| |||||||||| |||||||||| ||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 1179862 - 1179916
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||| ||||||| |||||||||||||| | ||||||||||||||||||||||    
T  1179862 aatgatagatagacatcctttattcccatatatccttgtacaccccatgcattag 1179916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 42221609 - 42221515
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||  ||||||||  ||| ||||||||||||||||||||||||||| |    ||||||| || |||||| ||| |||||||||||||||    
T  42221609 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 5958008 - 5957958
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| ||||||    
T  5958008 aatgttacataaacaccctttattctcatacacccttgtacacctcatgca 5957958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 8841354 - 8841404
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||||||||    
T  8841354 aatgttacatagacaccatttattctcatacactcttgtacaccccatgca 8841404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 15048111 - 15048157
Alignment:
Q  136 atagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  15048111 atagacaccctttattccgatacacccttgtacatcccatacattag 15048157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 16056411 - 16056501
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  | ||||||| ||  ||||| ||| |||||||||| ||||    
T  16056411 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 37038657 - 37038607
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||| |||||||||||| | ||||||||||||||||||||||||    
T  37038657 aatgttacataaacaccctttatttctatacacccttgtacaccccatgca 37038607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 42354510 - 42354560
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  42354510 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 42354560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 44507010 - 44507063
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||   ||||||| |||||||||||||||||||||||||||||    
T  44507010 aatgatacatagacata-tttattctcatacacccttgtacaccccatgcattag 44507063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 32032789 - 32032725
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||| |||| || | |||||||||| |||||||||| |||||||||| ||||    
T  32032789 tgtcagatttttgtgtggatgtc-aaggatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 38229507 - 38229427
Alignment:
Q  227 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||| || ||||||||||||||||||||||||  | | ||||||||| ||||| ||||  ||||||||| ||||||    
T  38229507 tccacgtgaccacatgtcagatttttgtgtgggtgtcagga-gcgtattgccacctaagagtgttcatgtatcataactcat 38229427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 4854785 - 4854839
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||| ||||||    
T  4854785 aatgttacatagacactctttattctcatatacccttgtacatcccatacattag 4854839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 10284553 - 10284603
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||| |||||||  ||||| ||||||||||||||||||    
T  10284553 aatgttacatagacaccttttattcttatacaaccttgtacaccccatgca 10284603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 16056323 - 16056377
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  16056323 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 16056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 24307715 - 24307769
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 24307769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 279
Target Start/End: Original strand, 29705466 - 29705527
Alignment:
Q  217 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 279  Q
    |||||||||||||| ||  | |||||||||| |||||||||||||| ||| ||||||||||||    
T  29705466 ttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 29705527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 32707925 - 32707979
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  32707925 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 32707979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 5e-42; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 32869772 - 32869673
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  32869772 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactcataaa 32869673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 17598648 - 17598552
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  17598648 tgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactcat 17598552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 22880664 - 22880755
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 303  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  22880664 tgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 29857921 - 29857827
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  29857921 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 6209471 - 6209565
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||| |||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  6209471 tgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 11427712 - 11427616
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatcta--agggtgtctatgtatcattactc 306  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| |||  |||||||||||||||||||||||    
T  11427712 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 31109414 - 31109501
Alignment:
Q  220 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||  |||||||||||    
T  31109414 tgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactca 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 31976342 - 31976248
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||||||| ||| ||| |||||||| |||||| |||||||||||||| ||||    
T  31976342 tgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 29858021 - 29857951
Alignment:
Q  112 acaataaacaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29858021 acaaaaaaaaaagagtaatgatacatagacaccatttattcccatacacccttgtacaccccatgcattag 29857951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 32869868 - 32869802
Alignment:
Q  116 taaacaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32869868 taaaaaaagagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 32869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 15832666 - 15832577
Alignment:
Q  217 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||| | | ||||| || |||| |||||||||||||||||||||    
T  15832666 ttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 11427801 - 11427742
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11427801 agagtaatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 11427742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 307
Target Start/End: Original strand, 15508034 - 15508125
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||| |||||    
T  15508034 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 23128133 - 23128224
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 303  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | ||||||  ||  ||| ||||||||| ||||||||    
T  23128133 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 15990052 - 15990142
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  15990052 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 17598740 - 17598678
Alignment:
Q  120 caaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  17598740 caaagagtaatgatacatagacaccttttatttccatacacccttgtacaccccatgcattag 17598678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 30341370 - 30341460
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  30341370 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 212 - 302
Target Start/End: Original strand, 28536494 - 28536582
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatt 302  Q
    |||||||||| ||||||||| ||||  |||||||||||||||||||||||||||  | |||||||||| |||||| ||| |||||||||||    
T  28536494 tgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 31110767 - 31110859
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||| ||||||| |||  ||||||||||||||||||| |  ||||||| |||||||||||| |||||| |||||||||||||| ||||    
T  31110767 tgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 15832755 - 15832701
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  15832755 aatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattag 15832701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 22880574 - 22880634
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  22880574 aagagtaatgatacatatacaccatttattcccatacacccttgtacaccccatgtattag 22880634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 31953036 - 31953132
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||| ||||| | ||||||| |||  || |||||||||||| ||||||||||||  |||||||||||| |||||| ||||||| |||||||||||||    
T  31953036 tgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactcat 31953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 946452 - 946377
Alignment:
Q  230 acgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    ||||||||| |||||||||||||| || ||||||||| ||||||||  || |||||| |||||||||||| |||||    
T  946452 acgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 307
Target Start/End: Complemental strand, 4231638 - 4231547
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||||  || | |||||||||||||||||||||||| |||  |||||||||||| |||| | ||| |||| ||||| |||||    
T  4231638 cttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 31976426 - 31976372
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  31976426 aatgttacatagacaccatttattctcatacacccttgtacaccccatacattag 31976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 9379744 - 9379807
Alignment:
Q  238 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    |||||||| |||||||| ||||||||||  | ||||||| ||||||||| ||||||||||||||    
T  9379744 acgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 31110683 - 31110737
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  31110683 aatgttacatagacatcctttatttccatacacctttgtacaccccatacattag 31110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 22422053 - 22422118
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||| |||||| || ||||||| || | |||||||| |||||| |||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactc 22422118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 12732550 - 12732482
Alignment:
Q  238 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||    | ||||||||  ||||  |||||||||||||||||||    
T  12732550 acgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 23128043 - 23128103
Alignment:
Q  123 agaggaatgatacatagacacccttt-attcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||| | ||||| ||| ||||||||||||||||| ||||||||||||    
T  23128043 agagtaatgatacatagagaaccttttatttccatacacccttgtacatcccatgcattag 23128103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 6209383 - 6209441
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||| ||||||||||||| |||| | ||||||| ||||||||||||    
T  6209383 agagtaatgatacatagataccctttattccc-tacatctttgtacatcccatgcattag 6209441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 4231726 - 4231672
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  4231726 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 4231672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 22422001 - 22422043
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacac 170  Q
    |||| |||||||||||| ||||||| |||||||||||||||||    
T  22422001 aatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 31952952 - 31953002
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||    
T  31952952 aatgttacatagacaccatttattctcatacatccttctacaccccatgca 31953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 4999520 - 4999614
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4999520 tgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 19329936 - 19329840
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  19329936 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcat 19329840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 7389483 - 7389384
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||    
T  7389483 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactcttaaa 7389384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 3784089 - 3783998
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 303  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  3784089 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 38267134 - 38267039
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||    
T  38267134 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 8080389 - 8080483
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  8080389 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 36361919 - 36362013
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  36361919 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 35137627 - 35137531
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||    
T  35137627 tgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactcat 35137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 3434656 - 3434562
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  3434656 tgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 19436193 - 19436287
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||    
T  19436193 tgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 36362120 - 36362026
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||||||||||||    
T  36362120 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 38837311 - 38837217
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||| ||||||||||||||||||||||||||    
T  38837311 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 40957801 - 40957707
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||| ||||||||||||||||||||    
T  40957801 tgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 32951499 - 32951592
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| | ||||||| |||||||| |||||||||||||||||||    
T  32951499 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 3694461 - 3694365
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||| |||||||| ||||    
T  3694461 tgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcattattcat 3694365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||||| ||| ||||| |||||| |||||| |||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 216 - 308
Target Start/End: Complemental strand, 8238303 - 8238210
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatcta-agggtgtctatgtatcattactcat 308  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||| |||||||||| ||||||    
T  8238303 cttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactcat 8238210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 19330027 - 19329966
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19330027 aaagagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 19329966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 21234495 - 21234399
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||||| || ||| |||||||||| ||||||||||| |||||||| ||||||||| || |||||| |||||||||||||| ||||||    
T  21234495 tgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactcat 21234399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 8080300 - 8080355
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8080300 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgca 8080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 3434730 - 3434676
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattag 3434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 10343597 - 10343663
Alignment:
Q  240 gtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||| | ||||||| ||| ||||||||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 18207273 - 18207180
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| ||||| |||||| | |||||| |||||||||| |||||||||| ||||||||||||| |||||| |||||||||||||| ||||    
T  18207273 tgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 36208267 - 36208173
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||| ||||||||||||| || |||||| ||||||||||||||||||    |||||| ||| ||||||||||||||||||||| ||||    
T  36208267 tgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 38044287 - 38044197
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || |||| |||||||||||||||||| ||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  38044287 cttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 35522970 - 35522881
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    |||||||||||||| ||||  || | ||||||||||||||||||||||||| ||| ||||||||||||  ||||| ||||||||||||||    
T  35522970 tgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 38837402 - 38837341
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  38837402 aaagagtaatgatacatagacaccctttatttccatacacccttgtacatcccatgcattag 38837341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 4999431 - 4999490
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  4999431 agagtaatgatacatagacaccttttattctcatacacccttgtacaccccatgcattag 4999490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 22343451 - 22343361
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  ||   || |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  22343451 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 41915831 - 41915741
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||||| ||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  41915831 cttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 35468894 - 35468955
Alignment:
Q  245 agatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 41423774 - 41423681
Alignment:
Q  214 tgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||| |||| || ||||||| || ||||||||||||||||  ||||||| ||||||||| |||||||| | |||||||||||||| |||||    
T  41423774 tgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactca 41423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 36362198 - 36362138
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||    
T  36362198 aagagtaatgatacatagacaccctttattctcatacacccttgtacatcccatgtattag 36362138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 40957891 - 40957831
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  40957891 aagagtaatgatacatagacacccattattttcatacacccttgtacaccccatgcattag 40957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 46033809 - 46033901
Alignment:
Q  214 tgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||| || || ||||| ||||||||||||||| ||||||||| ||| |||||||||||| |||||  | |||||||||||| ||||    
T  46033809 tgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 11044268 - 11044188
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||          |||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  11044268 cttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 32951410 - 32951469
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  32951410 agagtaatgatacatagacaccccttattctcatacacccttgtacaccccatgtattag 32951469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 216 - 307
Target Start/End: Original strand, 39255934 - 39256024
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||| || ||||||||| | ||||||||||||||||| ||||| ||||  |||||||||||| |||||| |||||||||||||| |||||    
T  39255934 cttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 7727996 - 7727906
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  |||| || |||||||||||| ||||  |||||| ||||||||| ||| |||||||||| |||||||||| ||||    
T  7727996 cttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 46374746 - 46374800
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  46374746 aatgttacatagacaccatttattcccatacacccttgtacaccccatacattag 46374800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 19436114 - 19436163
Alignment:
Q  133 tacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattag 19436163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 40846124 - 40846213
Alignment:
Q  217 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||  | ||||| ||| |||||||||||||| ||||||  |||||||||||| |||||| ||| |||||||||| ||||    
T  40846124 ttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 7389572 - 7389513
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  7389572 aagagtaatgatacatagacatcctttattcccatacaccc-tgtacaccccatgtattag 7389513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 36361842 - 36361901
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||    
T  36361842 agagtaatgatacatagacaccctttattctcatacacccttgtacattccatgtattag 36361901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 32564461 - 32564527
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||||||||||||||  |||||||||||| |||||  ||| |||||||||| |||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 35523054 - 35523000
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  35523054 aatgttacataaacaccatttattcccatacacccttgtacaccccatacattag 35523000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 46033723 - 46033777
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  46033723 aatgttacatagacaccatttattctcatacacccttgtacaccccatacattag 46033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 2318261 - 2318338
Alignment:
Q  224 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    ||||||||||||| ||  |||||||||||||||||||||||| |||||| |||||| ||| || |||  |||||||||    
T  2318261 gggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 11044361 - 11044302
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||||||| |||||||  |||||||| ||||||||| ||||||||||    
T  11044361 agagtaatgatacatagacactctttattttcatacacctttgtacacctcatgcattag 11044302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 26296735 - 26296644
Alignment:
Q  215 gcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||  || | |||| |||||||||| ||||| ||| ||| ||| ||||| || |||||| |||||||||||||| ||||    
T  26296735 gcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 2318163 - 2318217
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||| ||||||| ||||||||| |||||||| |||||||||||    
T  2318163 aatgttacatagacacactttatttccatacacctttgtacactccatgcattag 2318217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 16374746 - 16374800
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||||||||||| |||||||| |||||||| |||| ||||||    
T  16374746 aatgttacatagacaccctttattctcatacacctttgtacactccatacattag 16374800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 21234579 - 21234525
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||||||| ||||||    
T  21234579 aatgttacatagacaccttttattctcatacaccattgtacaccccatacattag 21234525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 31735940 - 31735882
Alignment:
Q  250 tttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    ||||||||||||| |||  ||||||||||| |||||| |||||||||||||| ||||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactcat 31735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 31736047 - 31736001
Alignment:
Q  136 atagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  31736047 atagataccttttattcccatacacccttgtacaccccatacattag 31736001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 41423860 - 41423810
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  41423860 aatgttacataaacaccctttattctcatacacctttgtacaccccatgca 41423810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 16374830 - 16374883
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 265  Q
    |||||||||| | | |||||||||| ||||||||||||||||||||| ||||||    
T  16374830 tgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaa 16374883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 35137716 - 35137657
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||| |||||| ||| ||| ||| |||||||||||||||| ||||||||||||    
T  35137716 agagtaatgatccatagataccatttgttctcatacacccttgtacatcccatgcattag 35137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 26898398 - 26898337
Alignment:
Q  217 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 279  Q
    ||||| |||||||| || || |||||||||| |||| ||||||||| ||||||||||||||||    
T  26898398 ttgtgtggggtccaggttaccacgtgtcagaattttatgtgggtgt-aaaaggtgtattgcca 26898337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 38044375 - 38044321
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  38044375 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 38044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 12311082 - 12311041
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtaca 169  Q
    |||| ||||||||||||||||||| ||||||||| |||||||    
T  12311082 aatgttacatagacaccctttatttccatacacctttgtaca 12311041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 39255846 - 39255887
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtaca 169  Q
    |||| |||||||||||||||||||  ||||||||||||||||    
T  39255846 aatgttacatagacaccctttattatcatacacccttgtaca 39255887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 27744315 - 27744375
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgt 272  Q
    ||||||| || ||| |||||||| | || |||||||||||||||||||| ||||| |||||    
T  27744315 tgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 41236441 - 41236347
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  41236441 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 11511468 - 11511563
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  11511468 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 48183055 - 48183149
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  48183055 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 50052434 - 50052528
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  50052434 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 6034138 - 6034043
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  6034138 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 54473539 - 54473634
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  54473539 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 480453 - 480547
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  480453 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 29234251 - 29234345
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  29234251 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 24995113 - 24995207
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  24995113 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 29239980 - 29239886
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  29239980 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 42044373 - 42044467
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  || | |||||||||| ||||||||||||||||||||||||||    
T  42044373 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 3481748 - 3481652
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| |||| |||||||||||||||||||||||    
T  3481748 tgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactcat 3481652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 23608329 - 23608235
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  23608329 tgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 50526178 - 50526272
Alignment:
Q  213 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||||||||    
T  50526178 gtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 31910286 - 31910191
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||  |||||||| || |||||| |||||||||||||| |||||    
T  31910286 tgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 41236530 - 41236471
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41236530 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 41236471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 24995024 - 24995082
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 181  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24995024 agagtaatgatacatagacaccctttattcccatacaccattgtacaccccatgcatta 24995082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 29977979 - 29977885
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||| ||  |||||||||||| ||| || | | |||||||||||||||    
T  29977979 tgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 40574846 - 40574777
Alignment:
Q  239 cgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||| ||||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactcat 40574777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 42044282 - 42044343
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  42044282 aaagagtaatgatacatagacaccctttatttccatacacccttgtacatcccatgcattag 42044343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 48182971 - 48183024
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 181  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcatta 48183024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 53352574 - 53352660
Alignment:
Q  214 tgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||| |||   ||||||| || |||||||||||||||||||||    
T  53352574 tgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 6034222 - 6034168
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattag 6034168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 19670726 - 19670816
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || ||||||||||||||||| |||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  19670726 cttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 41823976 - 41823926
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgt 262  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41823976 tgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 55475256 - 55475191
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||||| ||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 28480274 - 28480360
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtat 298  Q
    |||| ||||| ||||||||| ||||||| ||||||||||||||||| |||| || | |||||||| || |||||| |||||||||||    
T  28480274 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 28481149 - 28481235
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtat 298  Q
    |||| ||||| ||||||||| ||||||| ||||||||||||||||| |||| || | |||||||| || |||||| |||||||||||    
T  28481149 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 28482024 - 28482110
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtat 298  Q
    |||| ||||| ||||||||| ||||||| ||||||||||||||||| |||| || | |||||||| || |||||| |||||||||||    
T  28482024 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 29240064 - 29240014
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  29240064 aatgttacatagacaccctttattcccatacactcttgtacaccccatgca 29240014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 47986298 - 47986208
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||||||| ||||||  | |||||||||| |||||||||| |||||||||| ||||    
T  47986298 cttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 48647732 - 48647826
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||| ||||||||||| |||||| |||||||| ||||||||| || ||||||||||  | |||||| ||| ||||| |||| ||||    
T  48647732 tgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 50813902 - 50813992
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||| ||  |||| || |||||||||||||||||||||||||  |||||||| ||| ||||| |||| |||||||||| ||||    
T  50813902 cttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 17983753 - 17983825
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggt 288  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| ||||||||    
T  17983753 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 23608419 - 23608359
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||||||||||||||| |||||||||||||||| || |||||||| ||||||||||    
T  23608419 aagagtaatgatacatagacatcctttattcccatacatccctgtacacctcatgcattag 23608359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 241 - 311
Target Start/End: Original strand, 29547994 - 29548064
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||||||||||||||||||||  | |||||||||| |||||| ||| |||||||||| |||| ||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactcttaaa 29548064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 32767048 - 32766958
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||| |||||||  || | || |||||||||||||| ||||||||||  |||||||||||| ||||| |||| |||||||||| ||||    
T  32767048 cttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 54473455 - 54473509
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||| |||||    
T  54473455 aatgatacatgaacaccctttattcccatacacccttgtacactccatgtattag 54473509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 47104612 - 47104544
Alignment:
Q  238 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||| |||||||||||||||||| |  |||||||| ||||||||  ||||||| |||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 50052350 - 50052393
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacacc 171  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  50052350 aatgttacatagacaccctttattcccatacacctttgtacacc 50052393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 53352496 - 53352539
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacacc 171  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacacc 53352539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 306
Target Start/End: Original strand, 8343177 - 8343263
Alignment:
Q  220 tgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||  || | || |||||||||||| ||| ||||||||| | |||||||||| |||||| ||| |||||||||| ||||    
T  8343177 tgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 11511380 - 11511437
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 181  Q
    |||| ||||||||||||||||  |||||| ||||||||||||||||||| |||||||||    
T  11511380 agagtaatgatacatagacaca-tttatttccatacacccttgtacacctcatgcatta 11511437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 18924530 - 18924604
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaacaaa 315  Q
    |||||||||||||||||| | ||||  |||||||||||| |||||||| | |||| ||||| |||||||| ||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactcataatcaaa 18924604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 31910370 - 31910316
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||| ||||||    
T  31910370 aatgttacatagacaccatttattcccatacactcttgtacatcccatacattag 31910316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 41824060 - 41824006
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||| ||||||||||    
T  41824060 aatgttacatagacaccatttattctcatacacctttgtacacctcatgcattag 41824006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 50526093 - 50526143
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||| |||||||||||| | ||||||||||||||||||||||||    
T  50526093 aatgttacataaacaccctttatttctatacacccttgtacaccccatgca 50526143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 29589777 - 29589831
Alignment:
Q  243 tcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtat 298  Q
    |||||||||||||||||||||||  ||||||||| || |||||||||| |||||||    
T  29589777 tcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 40574949 - 40574910
Alignment:
Q  136 atagacaccctttattcccatacacccttgtacaccccat 175  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  40574949 atagacaccttttattctcatacacccttgtacaccccat 40574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 19670638 - 19670692
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  19670638 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 19670692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 29547881 - 29547935
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  29547881 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 29547935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 55475369 - 55475315
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  55475369 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 55475315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 480382 - 480423
Alignment:
Q  141 caccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||    
T  480382 cacccattatttccatacacctttgtacaccccatgcattag 480423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 44536781 - 44536845
Alignment:
Q  241 tgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||| |||| || |||||||||||| ||||  |||| |||||||||| ||||    
T  44536781 tgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 7465741 - 7465835
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7465741 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 10249388 - 10249482
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  10249388 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 17473114 - 17473020
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17473114 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 32505654 - 32505748
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  32505654 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 28381661 - 28381760
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  28381661 tgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcataaa 28381760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 28863549 - 28863458
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  28863549 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 40701572 - 40701477
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40701572 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 9058574 - 9058480
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9058574 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 33436106 - 33436200
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  33436106 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 13438437 - 13438341
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||||||||    
T  13438437 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactcat 13438341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 5574494 - 5574588
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  5574494 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 30915557 - 30915463
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||||||    
T  30915557 tgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 19930826 - 19930922
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  19930826 tgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcattattcat 19930922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 27864798 - 27864702
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||    
T  27864798 tgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactcat 27864702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 4060779 - 4060684
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  4060779 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 40613908 - 40614004
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| ||||||    
T  40613908 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcat 40614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 20700909 - 20700815
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||  ||||| |||||||||||||||||||    
T  20700909 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 38882831 - 38882913
Alignment:
Q  223 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  38882831 ggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 38273148 - 38273242
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||| ||||    
T  38273148 tgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 33436279 - 33436211
Alignment:
Q  238 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 7465649 - 7465711
Alignment:
Q  120 caaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7465649 caaagagtaatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 7465711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 26891510 - 26891604
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||| || |||||||||||| || ||||||||||||||||||||||| |  |||||||||||| ||||||||| ||||||||||| ||||    
T  26891510 tgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 42257287 - 42257193
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||| | |||||||||| |||| | |||||||||||||| ||||    
T  42257287 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 2533217 - 2533124
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||| | ||||||||||  ||||| |||||||||||||| ||||    
T  2533217 tgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 5574422 - 5574476
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5574422 aatgatacatagacaccctttattcccatacacccttgtacacgccatgcattag 5574476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 10249304 - 10249358
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 10249358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 13438521 - 13438467
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 13438467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 17473198 - 17473144
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 17473144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 28863633 - 28863579
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 28863579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 19930735 - 19930796
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  19930735 aaagagtaatgatacatagacaccttttattcccatacacccttgtacacctcatgcattag 19930796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 36168928 - 36168836
Alignment:
Q  214 tgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||| ||| | |||||||| ||||||||||||| || ||| | ||||||| ||||||||| |||||||||||||| ||||    
T  36168928 tgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 216 - 308
Target Start/End: Complemental strand, 43490211 - 43490119
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||| || |||||||||| |||||||||| ||||||    
T  43490211 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactcat 43490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 17820010 - 17820105
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||| ||||| ||||||||||| || || |||||||||||||||||||||||||  |||||||||||| |||  | |||||||||||||| |||||    
T  17820010 tgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactca 17820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 20700993 - 20700943
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20700993 aatgttacatagacaccctttattcccatacacccttgtacaccccatgca 20700943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 38882733 - 38882787
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgcattag 38882787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 41575220 - 41575138
Alignment:
Q  223 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    ||||||||| |||| || ||||| |||||||||||  ||||||| |||||||| |||||||||| ||||||||||||||||||    
T  41575220 ggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 32505570 - 32505623
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 181  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcatta 32505623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 40613824 - 40613877
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 181  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40613824 aatgttacatagacaccctttattcccatacacccttgtacaccccatacatta 40613877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 3440073 - 3439985
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatca 300  Q
    |||||||||||||||||||||| |  || ||| ||||||||||||||||||| |   ||||||||||| ||||||||||||| ||||||    
T  3440073 tgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 28381572 - 28381624
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccat 175  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  28381572 agagtaatgatacatagacaccctttattcccatacatccttgtacaccccat 28381624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 40701661 - 40701602
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  40701661 agagtaatgatacatagacaccttttatttccatacacccttgtacacccgatgcattag 40701602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 38732444 - 38732354
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  |||| || |||||||||||||||||||||||||  | ||||||| ||  ||||||||| |||||||||| ||||    
T  38732444 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 2997497 - 2997569
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggt 288  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| ||||||||    
T  2997497 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 3738037 - 3737986
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtc 263  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||||||    
T  3738037 tgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 4060868 - 4060809
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||    
T  4060868 agagtaatgatacataaacatcttttatttccatacacccttgtacaccccatgcattag 4060809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 27864874 - 27864815
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||| |||||| |||||    
T  27864874 agagtaatgatacattgacaccctttattctcatacacccttgtacatcccatgtattag 27864815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 9058658 - 9058604
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||| ||| | ||||||||||||||||||| |||||||||||||||||||||    
T  9058658 aatgatatataaataccctttattcccatacactcttgtacaccccatgcattag 9058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 13365443 - 13365369
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgt 290  Q
    |||||||||||||||  ||   || |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  13365443 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgt 13365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 30915641 - 30915587
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||||| |||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattag 30915587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 33436022 - 33436076
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  33436022 aatgatgcatagacaccttttattctcatacacccttgtacacctcatgcattag 33436076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 45097745 - 45097835
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||| ||||||||||  | |||||||||| |||||| ||| |||||||||| ||||    
T  45097745 cttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 2533289 - 2533249
Alignment:
Q  140 acaccctttattcccatacacccttgtacaccccatgcatt 180  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  2533289 acaccctttattcccatacacccttgtacaccccatacatt 2533249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 36169014 - 36168960
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||| ||||||||||||| ||||||| |||||||||||||| ||||||    
T  36169014 aatgttacataaacaccctttattctcatacactcttgtacaccccatacattag 36168960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 42257366 - 42257317
Alignment:
Q  133 tacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||||| | |||||| |||||||||||||| ||||||    
T  42257366 tacatagacaccctttatttctatacactcttgtacaccccatacattag 42257317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 3440157 - 3440113
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccc 172  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||    
T  3440157 aatgttacatagacaccctttatttccatacacctttgtacaccc 3440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 17823966 - 17823919
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccat 175  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||||||    
T  17823966 aatgttacatagacatcctttatttacatacacccttgtacaccccat 17823919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 283 - 311
Target Start/End: Original strand, 28863614 - 28863642
Alignment:
Q  283 aagggtgtctatgtatcattactcataaa 311  Q
    |||||||||||||||||||||||||||||    
T  28863614 aagggtgtctatgtatcattactcataaa 28863642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 2582009 - 2581915
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  2582009 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 27564741 - 27564838
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcata 309  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  27564741 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcata 27564838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 9474882 - 9474977
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  9474882 tgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 48716288 - 48716383
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  48716288 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 38632327 - 38632421
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  38632327 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 3000413 - 3000319
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  3000413 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 47452326 - 47452422
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  47452326 tgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 47452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 8346394 - 8346488
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||    
T  8346394 tgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 38595248 - 38595154
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||||||||||||    
T  38595248 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 51898689 - 51898783
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||||||    
T  51898689 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 44548382 - 44548473
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| | ||||||||||||||||    
T  44548382 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 41758899 - 41758805
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  41758899 tgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 50630552 - 50630458
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| | |||||||||| |||||||| |||||||||||||||||    
T  50630552 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 32813341 - 32813247
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  32813341 tgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 43226 - 43132
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| |  |||||  |||||||||||||||||||    
T  43226 tgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 37649292 - 37649196
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||  | |||||||| |||||||||||||||||||||||||||||  ||||||||||| |||| | |||||||||||||||||||||    
T  37649292 tgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactcat 37649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 11152385 - 11152476
Alignment:
Q  213 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    |||||||||||||||| || |||||||||||||||||||||||||| |||| || |||||||||||| |||| ||||||||||| ||||||||    
T  11152385 gtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 27564652 - 27564711
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27564652 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 27564711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 5959010 - 5959100
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  |||| || ||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||| ||||    
T  5959010 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 37649376 - 37649322
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 37649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 48716204 - 48716258
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 48716258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 13414855 - 13414791
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattg 276  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  13414855 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 303
Target Start/End: Complemental strand, 26274522 - 26274435
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 303  Q
    ||||||| || |||||||||||| ||||||||||||| ||||| ||||||| | ||||||||||  ||||||||||||||||||||||    
T  26274522 cttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatta 26274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 307
Target Start/End: Original strand, 50591010 - 50591101
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||| |||||    
T  50591010 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 41758983 - 41758929
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 41758929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 26440828 - 26440732
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    ||||||| |||||| |||| ||| | ||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||| |||| | ||||||    
T  26440828 tgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcctaactcat 26440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 45044566 - 45044670
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||| |||||||||||||| ||| |||| |||||||||||||| ||||||||||| |||||||||||| ||||||   | |||||||||| |||| ||||    
T  45044566 tgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactcttaaa 45044665  T
Q  312 caaaa 316  Q
     ||||    
T  45044666 aaaaa 45044670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 49811533 - 49811627
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||| ||| |  || ||||||||||||||||||||||| ||||||| ||||||||| || |||||| ||||||| |||||| ||||    
T  49811533 tgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 44454073 - 44453984
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    |||||||||| ||| ||||||| || || |||||||||||||||||||| |||| || ||||||||||  ||| ||||||||||||||||    
T  44454073 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 9474792 - 9474852
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  9474792 aagagtaatgatacatagacactctttattctcatacacccttgtacatcccatgcattag 9474852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 38632253 - 38632297
Alignment:
Q  138 agacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38632253 agacaccctttattcccatacacccttgtacaccccatgcattag 38632297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 26274612 - 26274553
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  26274612 agagtaatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattag 26274553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 23597097 - 23597191
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||| ||||||  |||| ||||| | ||||||||||||||| ||||||| |||||  ||||||||||| |||| | |||||||||||||||||||    
T  23597097 tgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 32813425 - 32813371
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  32813425 aatgttacatagacaccatttattcccatacacccttgtacaccccatacattag 32813371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 47452242 - 47452292
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgca 47452292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 43315 - 43256
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||||| |||||||||||  |||||| |||||||||||||||||||||    
T  43315 agagtaatgatacatagataccctttattcttatacactcttgtacaccccatgcattag 43256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 3302539 - 3302638
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||||  ||||||||  ||| ||||||||||||||||||||||||||| |    | ||||| || |||||| ||| ||||||||||||||||||||    
T  3302539 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactcataaa 3302638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 307
Target Start/End: Original strand, 41608503 - 41608594
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||| |||||||||  || | || ||||||||||||||||| |||||||  |||||||||||| |||||| ||| |||||||||| |||||    
T  41608503 cttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 37926448 - 37926538
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||| |||| |||| ||| | ||||||||||||||| ||||||||| ||||| |||||||||| |||| | | |||||||||||| ||||    
T  37926448 cttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 50630636 - 50630582
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  50630636 aatgatgcatagacaccatttattctcatacacccttgtacaccctatgcattag 50630582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 6260964 - 6260868
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    ||||||| ||||||||||||||||| || ||| |||||||| |||||||||  |  |||||||| ||| |||||| | ||||| |||||| ||||||    
T  6260964 tgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactcat 6260868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 38595337 - 38595285
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccat 175  Q
    |||| ||||||||||||||| || ||||| |||||||||||||||||||||||    
T  38595337 agagtaatgatacatagacatccattatttccatacacccttgtacaccccat 38595285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 2582098 - 2582039
Alignment:
Q  123 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||||||||||| |||||||||||||  ||||||||||||||||| |||| |||||    
T  2582098 agagtaatgatacataaacaccctttattctaatacacccttgtacacctcatgtattag 2582039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 3000497 - 3000450
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccat 175  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||||    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccat 3000450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 48489394 - 48489343
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtc 263  Q
    |||||||||||||| |||||||||| || |||||||||||||||||| ||||    
T  48489394 tgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 49811449 - 49811503
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||||||||||||||||| ||||||||||||| |||| ||| ||||||    
T  49811449 aatgttacatagacaccctttattctcatacacccttgtgcaccacatacattag 49811503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 51898605 - 51898655
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||| |||||||||||| | ||||||||||||||||||||||||    
T  51898605 aatgttacataaacaccctttatttctatacacccttgtacaccccatgca 51898655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 44334176 - 44334229
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 265  Q
    |||| |||||| ||||||| ||||||||||||||| ||||||||||| ||||||    
T  44334176 tgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaa 44334229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 308
Target Start/End: Complemental strand, 47748532 - 47748441
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||| ||||  || | || |||||||||||| | ||||||||||  |||||||||||| |||||||| | |||||||||| ||||||    
T  47748532 cttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaag-ggtgtattgccacctaagggtatttatgtatcataactcat 47748441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 34340071 - 34340133
Alignment:
Q  238 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 301  Q
    |||||||||||||||||||||   |||| ||||||||| ||| ||||| |||||||||||||||    
T  34340071 acgtgtcagatttttgtgtggca-tcaacaggtgtattaccacctaagagtgtctatgtatcat 34340133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 750301 - 750240
Alignment:
Q  217 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgcca 279  Q
    ||||| |||||||| || || |||||||||| |||||||||||||| ||| ||||||||||||    
T  750301 ttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgcca 750240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 8346309 - 8346363
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||| | ||| ||||||| |||||||| |||||||| |||||||||||    
T  8346309 aatgatacataaataccatttattctcatacacctttgtacactccatgcattag 8346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 37926368 - 37926414
Alignment:
Q  136 atagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||| ||||||| |||||| ||||||||||||||| ||||||    
T  37926368 atagacaccatttattcacatacatccttgtacaccccatacattag 37926414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 45044482 - 45044536
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||| |||||| | ||||||| |||||||||||||||||||||| ||||||    
T  45044482 aatgttacgtagacatcatttattctcatacacccttgtacaccccatacattag 45044536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 18520890 - 18520981
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatta 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  18520890 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 40145501 - 40145404
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcata 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||    
T  40145501 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactcata 40145404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 33149644 - 33149748
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  33149644 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcataaa 33149743  T
Q  312 caaaa 316  Q
     ||||    
T  33149744 aaaaa 33149748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 35785293 - 35785198
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35785293 tgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 2740368 - 2740274
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  2740368 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 13811746 - 13811652
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||| ||||||    
T  13811746 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 36732948 - 36733042
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  36732948 tgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 14831908 - 14831812
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  14831908 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 14831812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 42414308 - 42414404
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||||||    
T  42414308 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactcat 42414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 28177869 - 28177773
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| ||||||    
T  28177869 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcat 28177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 6679792 - 6679698
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||    
T  6679792 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 35943898 - 35943992
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||    
T  35943898 tgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 15409616 - 15409710
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||   ||||||| || |||||| |||||||||||||| ||||    
T  15409616 tgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 2740467 - 2740398
Alignment:
Q  114 aataaaca-aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2740467 aataaacagaagagtaatgatacatagacaccctttattcccatacacccttgtacatcccatgcattag 2740398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 33149545 - 33149614
Alignment:
Q  113 caataaacaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  33149545 caataaaaaaagagtaatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattag 33149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 14832001 - 14831938
Alignment:
Q  119 acaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14832001 acaacgagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 14831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 26720610 - 26720515
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||| |||| ||| | ||||||||||||||| ||| ||||| ||| |||||||||||| |||||| |||||||||||||| |||||    
T  26720610 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 26990359 - 26990264
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||||||||||| |||| ||| | ||||||||||||||| ||| ||||| ||| |||||||||||| |||||| |||||||||||||| |||||    
T  26990359 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 3921275 - 3921365
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||| ||||    
T  3921275 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 31009082 - 31008988
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||   ||||||| || |||||| ||| |||||||||| ||||    
T  31009082 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 247 - 305
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  247 atttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 41470425 - 41470516
Alignment:
Q  215 gcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||||||||||||||||||||||||| | ||  | | ||| | |||||||||| |||| ||||||||||||| |||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactc 41470516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 2252178 - 2252268
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||| ||| |||||||||| ||||    
T  2252178 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 35785377 - 35785323
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattag 35785323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 18520800 - 18520860
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  18520800 aagagtaatgatacatagacaccctttattttcatacacccttgtacacctcatgcattag 18520860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 20073522 - 20073616
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||| |||||||||||   |||||  |||||||| |||| |||||||| ||||||||| ||||||| | ||||||| |||||||||||    
T  20073522 tgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 36732872 - 36732918
Alignment:
Q  136 atagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36732872 atagacaccctttattcccatacacccttgtacacctcatgcattag 36732918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 40145592 - 40145531
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||| | ||||||||    
T  40145592 aaagagtaatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattag 40145531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 31132436 - 31132392
Alignment:
Q  214 tgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 258  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  31132436 tgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 13811826 - 13811776
Alignment:
Q  132 atacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  13811826 atacatagacaccatttattcccatacatccttgtacatcccatgcattag 13811776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 15409532 - 15409586
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  15409532 aatgttacataaacaccctttattcgcatacacccttgtacaccccatacattag 15409586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 31009166 - 31009116
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  31009166 aatgttacatagacaccctttattctcatacacctttgtacaccccatgca 31009116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 31132512 - 31132458
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| ||||||||||    
T  31132512 aatgatacataaacaccctttattttcatacacccttgtacacctcatgcattag 31132458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 16115247 - 16115296
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacac 170  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  16115247 aaagagtaatgatacatagacaccctttattctcatacactcttgtacac 16115296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 33825356 - 33825424
Alignment:
Q  238 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||||||| ||||||||||||   ||||||||||| |||||  |||||||| ||||||||||    
T  33825356 acgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 39688934 - 39689002
Alignment:
Q  243 tcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcataaa 311  Q
    |||||||||||||||||||||||  | ||||||||||  ||||||||| |||||||||| |||| ||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactcttaaa 39689002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 6260007 - 6260102
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    ||||||| || | |||||| ||||| | |||| ||||||||| |||||||| ||| ||||||||| || ||| || ||| ||||||||||||||||    
T  6260007 tgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactca 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  243 tcagatttttgtgtgggtgtcaaaagg-tgtattgccatctaagggtgtctatgtatcat 301  Q
    |||||||||||||||||||||||  || |||||||||| |||||| ||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 21370098 - 21370048
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgt 262  Q
    |||| |||||||||||||||||||| || ||||||||||||| ||||||||    
T  21370098 tgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 35943814 - 35943864
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||||||||  |||||| ||||||||||||||||||||||||||    
T  35943814 aatgttacatagacacattttatttccatacacccttgtacaccccatgca 35943864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 38296297 - 38296203
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||||  || |||||||  ||||||||| ||||||||||||||| | || |||||||||| || |||||   ||||||||||||| ||||    
T  38296297 tgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataactc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 16327995 - 16327902
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattact 305  Q
    |||||||||| | ||| ||| |||  ||||||||||||||| ||||||||||||  | |||||||||| |||||| | | ||| ||||||||||    
T  16327995 tgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 39557534 - 39557586
Alignment:
Q  223 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtatt 275  Q
    |||||||| ||||  ||||||||||||||||||||| ||| || |||||||||    
T  39557534 ggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtatt 39557586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 4123 - 4029
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  4123 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

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Target: scaffold0237; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 4214 - 4153
Alignment:
Q  121 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4214 aaagagtaatgatacatagacaccatttattcccatacacccttgtacaccccatgcattag 4153  T

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Target: scaffold1268 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 935 - 1031
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||| ||| ||| |||||||||||| |||| | |||||||||||||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

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Target: scaffold1268; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 851 - 901
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  851 aatgttacataaacaccctttattcccatacactcttgtacaccccatgca 901  T

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Target: scaffold1267 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 935 - 1031
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactcat 308  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||| ||| ||| |||||||||||| |||| | |||||||||||||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

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Target: scaffold1267; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 851 - 901
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 178  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  851 aatgttacataaacaccctttattcccatacactcttgtacaccccatgca 901  T

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Target: scaffold0321 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 10115 - 10209
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 306  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||| ||||||| | |||||||||| |||| |||||||||||||||| ||||    
T  10115 tgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

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Target: scaffold0321; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 10025 - 10085
Alignment:
Q  122 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 182  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  10025 aagagtaatgatacatagacacccattatttccatacacccttgtacaccctatgcattag 10085  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 307
Target Start/End: Original strand, 8873 - 8964
Alignment:
Q  216 cttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactca 307  Q
    |||||| |||||||||||||||| |||||| |||||||||| | |||||||  |||||||| ||  ||||| ||||||| |||||| |||||    
T  8873 cttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactca 8964  T

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Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 8785 - 8832
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacaccccat 175  Q
    |||| |||||||||||| |||||||  |||||||||||||||||||||    
T  8785 aatgttacatagacaccttttattcttatacacccttgtacaccccat 8832  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 152587 - 152514
Alignment:
Q  217 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgt 290  Q
    ||||||||| ||||  |||| || |||||||||||||||||||||||||  |||||||||||| | ||||||||    
T  152587 ttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgt 152514  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 17148 - 17097
Alignment:
Q  212 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtc 263  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||| ||||    
T  17148 tgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtc 17097  T

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Target: scaffold0316; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 17281 - 17238
Alignment:
Q  128 aatgatacatagacaccctttattcccatacacccttgtacacc 171  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||    
T  17281 aatgttacatagacaccctttatttccatacacctttgtacacc 17238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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