View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19897_low_26 (Length: 318)

Name: NF19897_low_26
Description: NF19897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19897_low_26
NF19897_low_26
[»] chr2 (39 HSPs)
chr2 (13-318)||(35329860-35330165)
chr2 (213-294)||(37053518-37053599)
chr2 (211-291)||(14209199-14209279)
chr2 (221-293)||(37474688-37474760)
chr2 (213-298)||(9478223-9478308)
chr2 (213-290)||(28803575-28803652)
chr2 (236-293)||(33192140-33192197)
chr2 (209-293)||(18962104-18962188)
chr2 (206-298)||(29430673-29430764)
chr2 (221-275)||(5045241-5045295)
chr2 (207-292)||(29429824-29429910)
chr2 (213-267)||(44606180-44606234)
chr2 (213-298)||(1493574-1493659)
chr2 (213-294)||(4550701-4550782)
chr2 (216-269)||(13864577-13864630)
chr2 (213-290)||(17952770-17952847)
chr2 (213-298)||(26964937-26965022)
chr2 (214-271)||(31461363-31461420)
chr2 (206-271)||(35459827-35459892)
chr2 (212-252)||(35713146-35713186)
chr2 (215-271)||(38239639-38239695)
chr2 (220-271)||(4090280-4090331)
chr2 (210-265)||(32837232-32837287)
chr2 (213-272)||(33197326-33197385)
chr2 (213-298)||(7103544-7103627)
chr2 (220-294)||(10143103-10143177)
chr2 (208-266)||(10190198-10190256)
chr2 (205-294)||(3673723-3673812)
chr2 (208-289)||(33267586-33267667)
chr2 (213-270)||(34339047-34339104)
chr2 (210-299)||(37845412-37845501)
chr2 (234-271)||(40758968-40759005)
chr2 (206-287)||(42817448-42817529)
chr2 (207-271)||(11393454-11393518)
chr2 (207-271)||(11410115-11410179)
chr2 (228-296)||(13866828-13866896)
chr2 (203-287)||(29729839-29729923)
chr2 (220-268)||(36114614-36114662)
chr2 (213-269)||(43431534-43431590)
[»] chr1 (36 HSPs)
chr1 (213-318)||(30259528-30259633)
chr1 (187-293)||(45999354-45999460)
chr1 (216-292)||(18434545-18434621)
chr1 (213-298)||(4276697-4276783)
chr1 (211-293)||(44032065-44032147)
chr1 (222-299)||(15360827-15360904)
chr1 (213-292)||(4200153-4200232)
chr1 (213-268)||(16982027-16982082)
chr1 (213-271)||(870969-871027)
chr1 (203-281)||(4202207-4202285)
chr1 (219-268)||(47002965-47003014)
chr1 (206-298)||(49516986-49517079)
chr1 (201-281)||(23373368-23373448)
chr1 (206-280)||(4338565-4338640)
chr1 (228-294)||(17423003-17423070)
chr1 (215-254)||(24857619-24857658)
chr1 (239-306)||(31517793-31517860)
chr1 (218-293)||(44928222-44928297)
chr1 (213-263)||(6659627-6659677)
chr1 (213-271)||(7200930-7200988)
chr1 (213-271)||(23895260-23895318)
chr1 (228-298)||(33527208-33527278)
chr1 (238-292)||(39777612-39777666)
chr1 (206-292)||(50998469-50998555)
chr1 (214-263)||(1662499-1662548)
chr1 (228-265)||(2773698-2773735)
chr1 (234-318)||(28689494-28689579)
chr1 (258-307)||(37272638-37272687)
chr1 (228-281)||(50319231-50319284)
chr1 (234-294)||(7218139-7218199)
chr1 (212-288)||(23370369-23370445)
chr1 (227-271)||(36151593-36151637)
chr1 (209-269)||(38651499-38651559)
chr1 (206-298)||(40304115-40304207)
chr1 (203-271)||(40357974-40358042)
chr1 (203-271)||(42550155-42550223)
[»] chr4 (41 HSPs)
chr4 (213-296)||(54325100-54325183)
chr4 (214-294)||(18630605-18630685)
chr4 (213-307)||(24929417-24929511)
chr4 (211-293)||(30024622-30024704)
chr4 (213-294)||(8469442-8469523)
chr4 (211-281)||(4191661-4191732)
chr4 (213-296)||(44319874-44319956)
chr4 (205-271)||(3662265-3662330)
chr4 (212-294)||(4071806-4071887)
chr4 (213-267)||(4471095-4471149)
chr4 (228-298)||(30338653-30338723)
chr4 (221-271)||(51044547-51044597)
chr4 (220-265)||(42641727-42641772)
chr4 (206-271)||(46796935-46797000)
chr4 (221-293)||(21593078-21593149)
chr4 (216-268)||(41088311-41088363)
chr4 (207-294)||(21157686-21157773)
chr4 (221-268)||(21683570-21683617)
chr4 (220-271)||(21952506-21952557)
chr4 (212-271)||(36734816-36734875)
chr4 (213-268)||(41050620-41050675)
chr4 (212-271)||(41606109-41606168)
chr4 (216-271)||(47970245-47970300)
chr4 (247-294)||(55870406-55870453)
chr4 (206-252)||(2980578-2980624)
chr4 (214-271)||(32920488-32920543)
chr4 (220-294)||(46013365-46013439)
chr4 (212-270)||(51555956-51556014)
chr4 (213-271)||(54277402-54277460)
chr4 (213-269)||(3891501-3891555)
chr4 (212-293)||(23819013-23819093)
chr4 (218-267)||(27405980-27406029)
chr4 (201-266)||(41603484-41603549)
chr4 (212-293)||(43372035-43372116)
chr4 (206-266)||(7749175-7749235)
chr4 (214-266)||(11264226-11264278)
chr4 (203-267)||(14011148-14011212)
chr4 (203-271)||(19422332-19422400)
chr4 (227-271)||(35958593-35958637)
chr4 (239-271)||(39438624-39438656)
chr4 (242-298)||(53626729-53626785)
[»] chr5 (36 HSPs)
chr5 (206-294)||(19177396-19177484)
chr5 (206-294)||(35135727-35135815)
chr5 (213-271)||(35960338-35960396)
chr5 (214-298)||(28586827-28586911)
chr5 (240-291)||(985584-985635)
chr5 (239-298)||(14295456-14295515)
chr5 (206-268)||(6733983-6734045)
chr5 (206-271)||(20982223-20982288)
chr5 (213-298)||(32059650-32059734)
chr5 (213-298)||(32172577-32172662)
chr5 (215-280)||(36646166-36646231)
chr5 (228-292)||(11667102-11667166)
chr5 (203-271)||(35095871-35095939)
chr5 (216-271)||(37063162-37063217)
chr5 (234-280)||(28578837-28578883)
chr5 (206-271)||(912737-912802)
chr5 (215-280)||(1019523-1019588)
chr5 (213-294)||(36539670-36539751)
chr5 (215-271)||(7096215-7096271)
chr5 (206-242)||(11790900-11790936)
chr5 (247-294)||(583838-583885)
chr5 (206-265)||(19113211-19113270)
chr5 (217-271)||(11095557-11095611)
chr5 (228-298)||(16889674-16889744)
chr5 (221-271)||(18857488-18857538)
chr5 (228-280)||(3970759-3970812)
chr5 (214-259)||(8985583-8985628)
chr5 (213-294)||(12407726-12407806)
chr5 (213-266)||(13224353-13224406)
chr5 (213-266)||(26516222-26516275)
chr5 (213-281)||(32194159-32194228)
chr5 (213-262)||(36638670-36638719)
chr5 (207-298)||(9202809-9202901)
chr5 (235-271)||(10303747-10303783)
chr5 (220-268)||(11835208-11835256)
chr5 (203-291)||(29116998-29117086)
[»] chr8 (26 HSPs)
chr8 (208-271)||(14482121-14482184)
chr8 (220-298)||(4763849-4763927)
chr8 (206-271)||(39392749-39392814)
chr8 (206-294)||(10727114-10727202)
chr8 (209-267)||(39551301-39551359)
chr8 (213-271)||(40728506-40728564)
chr8 (212-269)||(5226525-5226582)
chr8 (210-298)||(787167-787255)
chr8 (214-294)||(34770817-34770897)
chr8 (212-294)||(12972779-12972861)
chr8 (234-298)||(1470917-1470981)
chr8 (205-293)||(6918245-6918333)
chr8 (212-296)||(7026654-7026738)
chr8 (234-294)||(11000626-11000686)
chr8 (211-298)||(4558720-4558807)
chr8 (212-267)||(35298570-35298625)
chr8 (206-296)||(25872469-25872559)
chr8 (222-295)||(1112786-1112859)
chr8 (206-271)||(2364561-2364626)
chr8 (206-291)||(3645884-3645969)
chr8 (206-271)||(8062232-8062297)
chr8 (213-294)||(11056732-11056813)
chr8 (221-294)||(29973013-29973086)
chr8 (213-298)||(30988053-30988138)
chr8 (206-298)||(28769400-28769492)
chr8 (212-296)||(33209283-33209367)
[»] chr3 (28 HSPs)
chr3 (213-291)||(41028919-41028997)
chr3 (213-298)||(38462205-38462290)
chr3 (214-298)||(25183049-25183134)
chr3 (215-275)||(34958254-34958314)
chr3 (206-289)||(27792789-27792872)
chr3 (220-294)||(36139809-36139883)
chr3 (221-298)||(20192667-20192744)
chr3 (212-293)||(32703061-32703142)
chr3 (237-286)||(34954031-34954080)
chr3 (213-294)||(36101492-36101573)
chr3 (234-291)||(49586984-49587041)
chr3 (207-288)||(52450123-52450204)
chr3 (203-271)||(25185907-25185974)
chr3 (210-294)||(43116493-43116577)
chr3 (211-294)||(40122818-40122900)
chr3 (203-261)||(28283675-28283733)
chr3 (207-261)||(32663560-32663614)
chr3 (213-271)||(44374732-44374790)
chr3 (213-271)||(53457301-53457359)
chr3 (214-271)||(905058-905115)
chr3 (206-271)||(24268243-24268308)
chr3 (220-268)||(2128342-2128390)
chr3 (254-298)||(2201093-2201137)
chr3 (254-294)||(12923390-12923430)
chr3 (206-266)||(16790181-16790241)
chr3 (205-269)||(20349566-20349630)
chr3 (234-298)||(24887344-24887408)
chr3 (236-316)||(33405211-33405290)
[»] chr6 (30 HSPs)
chr6 (221-281)||(2456884-2456943)
chr6 (213-281)||(31672546-31672614)
chr6 (212-293)||(21959651-21959732)
chr6 (213-292)||(3169312-3169391)
chr6 (214-289)||(7713950-7714025)
chr6 (213-268)||(8349755-8349810)
chr6 (203-281)||(8010271-8010348)
chr6 (213-271)||(29269820-29269878)
chr6 (214-307)||(10452412-10452505)
chr6 (213-298)||(29274290-29274375)
chr6 (213-298)||(34671139-34671224)
chr6 (234-298)||(281909-281973)
chr6 (214-266)||(1810393-1810445)
chr6 (214-290)||(3204611-3204687)
chr6 (213-273)||(13360659-13360719)
chr6 (216-271)||(4248885-4248940)
chr6 (213-300)||(10032495-10032582)
chr6 (207-270)||(30523855-30523918)
chr6 (227-298)||(33787806-33787877)
chr6 (213-271)||(2514626-2514684)
chr6 (220-294)||(4006645-4006719)
chr6 (208-262)||(4247731-4247785)
chr6 (216-298)||(5550059-5550141)
chr6 (213-271)||(24774682-24774740)
chr6 (210-292)||(32386630-32386712)
chr6 (206-271)||(32513741-32513806)
chr6 (206-268)||(33911372-33911434)
chr6 (218-271)||(24836287-24836340)
chr6 (203-306)||(10400183-10400286)
chr6 (211-271)||(35095015-35095075)
[»] chr7 (35 HSPs)
chr7 (213-296)||(35536031-35536114)
chr7 (214-271)||(30496629-30496686)
chr7 (210-294)||(27481359-27481443)
chr7 (202-269)||(5373138-5373205)
chr7 (204-271)||(30751432-30751499)
chr7 (212-318)||(27548186-27548291)
chr7 (219-269)||(46223162-46223212)
chr7 (213-271)||(49060464-49060522)
chr7 (206-271)||(1431396-1431461)
chr7 (212-281)||(7244625-7244694)
chr7 (221-298)||(31002693-31002770)
chr7 (206-287)||(45593791-45593872)
chr7 (210-271)||(47004008-47004069)
chr7 (226-294)||(1417201-1417269)
chr7 (203-271)||(27626212-27626280)
chr7 (213-293)||(39551614-39551694)
chr7 (210-289)||(33894544-33894622)
chr7 (213-271)||(2223072-2223130)
chr7 (213-271)||(11721314-11721372)
chr7 (218-268)||(15328535-15328585)
chr7 (213-271)||(25511551-25511609)
chr7 (206-272)||(36598408-36598474)
chr7 (225-298)||(5272881-5272954)
chr7 (212-297)||(22759109-22759194)
chr7 (203-272)||(29574688-29574757)
chr7 (220-297)||(30133980-30134057)
chr7 (222-271)||(35808992-35809041)
chr7 (213-266)||(47006972-47007025)
chr7 (254-306)||(2048094-2048146)
chr7 (229-293)||(5006575-5006639)
chr7 (228-316)||(12110299-12110386)
chr7 (215-271)||(24973870-24973926)
chr7 (206-250)||(27389300-27389344)
chr7 (203-271)||(42281587-42281655)
chr7 (198-266)||(46091505-46091573)
[»] scaffold0590 (1 HSPs)
scaffold0590 (214-271)||(1162-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (214-271)||(2756-2813)
[»] scaffold0091 (1 HSPs)
scaffold0091 (212-269)||(5942-5999)
[»] scaffold0024 (1 HSPs)
scaffold0024 (213-317)||(27500-27603)
[»] scaffold0654 (1 HSPs)
scaffold0654 (213-271)||(6725-6783)
[»] scaffold0022 (1 HSPs)
scaffold0022 (213-279)||(143141-143207)
[»] scaffold0014 (1 HSPs)
scaffold0014 (213-271)||(116644-116702)
[»] scaffold0110 (1 HSPs)
scaffold0110 (206-298)||(4284-4377)


Alignment Details
Target: chr2 (Bit Score: 306; Significance: 1e-172; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 13 - 318
Target Start/End: Complemental strand, 35330165 - 35329860
Alignment:
Q  13 aaaatcagatgtgtatagttatggtgttgtacttttggagcttctcactggtcgagtgccggttgatatgaagagacctcctggcgaaggtgtactcgtt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35330165 aaaatcagatgtgtatagttatggtgttgtacttttggagcttctcactggtcgagtgccggttgatatgaagagacctcctggcgaaggtgtactcgtt 35330066  T
Q  113 acttgggtatgttaattcttttcacccatcttgactctttattaatcggtgaaagttattatggccctgcttggataaacaatttaattaaattaagtgt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35330065 acttgggtatgttaattcttttcacccatcttgactctttattaatcggtgaaagttattatggccctgcttggataaacaatttaattaaattaagtgt 35329966  T
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35329965 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 35329866  T
Q  313 cttgga 318  Q
    ||||||    
T  35329865 cttgga 35329860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 37053518 - 37053599
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||||||||| ||||| ||| |||||||| |||||| || ||||||||||||||| ||| ||||| ||||| ||||||    
T  37053518 ttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataag 37053599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 14209199 - 14209279
Alignment:
Q  211 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 291  Q
    ||||||||||||||||||| ||  ||| ||||||| |||||| ||||||||||||| |||| ||| ||||| |||||||||    
T  14209199 gtttatcatataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 37474688 - 37474760
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||| | ||| ||||| |||| ||||||    
T  37474688 taagtgtttatgcataaactatttcgataacaaaaaataaaataaagtcgatctgttttcatataaactataa 37474760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 9478223 - 9478308
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||||||||||||||| |||| ||||||| ||||||  |||||||||||| ||||  |  ||||| |||||||||| |||||    
T  9478223 ttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctatatgctgt 9478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 28803652 - 28803575
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagcta 290  Q
    |||||||||||||| ||||  ||||  |||||| |||||| |||||||||||||||||| ||| ||||| ||||||||    
T  28803652 ttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagcta 28803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 33192140 - 33192197
Alignment:
Q  236 aaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||| ||||| |||||    
T  33192140 aaactatttctataacataagataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 18962188 - 18962104
Alignment:
Q  209 gtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    ||||||||||| |||||| ||||| || | ||||||  |||||| ||||||||||||||| || ||| ||||| |||||||||||    
T  18962188 gtgtttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 29430673 - 29430764
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||| |||||||||| ||| ||||||| |||| ||||||| |||||| ||| |||| ||||||||| ||| ||||  ||||||||||||||||    
T  29430673 taagcgtttatcatacaagggtttatgtataagctatttctataacaaaagttaaa-taaagtcaaactgttttcttataagctataagctgt 29430764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 5045295 - 5045241
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctg 275  Q
    |||||||||||| |||| ||||||  |||||| ||||||||||||||||||||||    
T  5045295 taagtgtttatgtataagctatttttataacaaaagataaaataaagtcaagctg 5045241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 29429910 - 29429824
Alignment:
Q  207 aagtgtttatcatataagtgtttatgcataaacta-tttccataacataagataaaataaagtcaagctgctttcacataagctata 292  Q
    |||| ||||||||||||| | ||| | |||||||| |||  || ||| |||||||||||||||||| ||| ||||||||||||||||    
T  29429910 aagtttttatcatataagagcttacgtataaactacttttaatgacaaaagataaaataaagtcaaactgttttcacataagctata 29429824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 44606234 - 44606180
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaag 267  Q
    |||| ||||||||||||||| |||| |||||| ||||||| ||||||||||||||    
T  44606234 ttattatataagtgtttatgtataagctattttcataacaaaagataaaataaag 44606180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 1493659 - 1493574
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||||| || ||||  ||||||| |||| ||||||  ||||||||||||||| || || ||||| |||||||||| |||||    
T  1493659 ttatcatataattgcttatttataaactctttctataacaatagataaaataaagtctagttgttttcatataagctatatgctgt 1493574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 4550701 - 4550782
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||| ||||||| ||||| ||||  | ||||||||| | |||||||||||| ||||||||| ||||| |||| |||||||    
T  4550701 ttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataag 4550782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 13864577 - 13864630
Alignment:
Q  216 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    ||||||||||||||||| |||| ||||||| |||||| ||| ||||||||||||    
T  13864577 tcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 17952847 - 17952770
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagcta 290  Q
    |||||||||||| | ||||  |||| ||||||| |||||| |||||||||||||||||| ||  ||||| ||||||||    
T  17952847 ttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagcta 17952770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 26965022 - 26964937
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||| |||||||||||| | |||| ||||||| |||||| ||||| |||| |||||||||| | ||  ||||| |||||||||||    
T  26965022 ttatcgtataagtgtttacgaataagctatttctataacacaagattaaattaagtcaagcttcgtttgcataatctataagctgt 26964937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 31461363 - 31461420
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||| ||||  |||| ||||||| |||||| ||||||||||||||||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaa 31461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 35459827 - 35459892
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||||||||| || || |||| ||||||  ||| || ||||||||||||||||||    
T  35459827 taagtgtttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaa 35459892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 35713146 - 35713186
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataaca 252  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  35713146 tttatcatataagtgtttatgtataaactatttccgtaaca 35713186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 38239695 - 38239639
Alignment:
Q  215 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||| |||||||||||| |||| ||||||| |||||| |||||||||| |||||||    
T  38239695 atcatgtaagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaa 38239639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 4090280 - 4090331
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||| || |||| |||| |||||||||||||| ||||||||||||||||||    
T  4090280 ataagggtgtatgaataagctatttccataacacaagataaaataaagtcaa 4090331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 32837232 - 32837287
Alignment:
Q  210 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataa 265  Q
    |||||||||||||||   |||||||||| ||||||| |||||| ||||||||||||    
T  32837232 tgtttatcatataagcacttatgcataatctatttctataacaaaagataaaataa 32837287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 33197385 - 33197326
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaag 272  Q
    |||||||||||||| ||||  |||| ||||||| |||||| |||||| ||||||||||||    
T  33197385 ttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaag 33197326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 7103627 - 7103544
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||||| ||| ||||| | ||||||| |  ||||||  ||||||||||||||||| ||| ||| | ||||||||||||||||    
T  7103627 ttatcatatatgtgcttatgtagaaactatatttataaca--agataaaataaagtcaaactgttttaatataagctataagctgt 7103544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 10143103 - 10143177
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||| ||||| ||||  |||||| |||||| |||||||||| ||||||| ||| ||| | ||||||||||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataag 10143177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 10190198 - 10190256
Alignment:
Q  208 agtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    |||| |||||||||||||| ||||| |||||||||||  |||||| | |||||||||||    
T  10190198 agtggttatcatataagtgcttatgtataaactatttttataacaaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 3673723 - 3673812
Alignment:
Q  205 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||||| ||||||||||| ||||| || |  |||||| |||||| || |||||||||||| ||  || ||||| ||||| ||||||    
T  3673723 ttaagtgtttgtcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataag 3673812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 33267667 - 33267586
Alignment:
Q  208 agtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagct 289  Q
    |||| |||||||||||||| ||||| |||| ||||||| |||||| |   ||||||||||| || ||| ||||| |||||||    
T  33267667 agtggttatcatataagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataagct 33267586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 34339047 - 34339104
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtca 270  Q
    |||||||||||||| ||||| ||||||| |||| ||| |  |||||||||||||||||    
T  34339047 ttatcatataagtgcttatgtataaactttttctatagctaaagataaaataaagtca 34339104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 299
Target Start/End: Complemental strand, 37845501 - 37845412
Alignment:
Q  210 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtc 299  Q
    ||||||||||||||||  ||||  |||  ||||||  |||| | || ||||||||||||| ||||  |||||| ||||||||||||||||    
T  37845501 tgtttatcatataagttcttatttatatgctatttttataataaaatataaaataaagtcgagcttgtttcacgtaagctataagctgtc 37845412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 40758968 - 40759005
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaa 271  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  40758968 ataagctatttccataacaaaagataaaataaagtcaa 40759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 42817529 - 42817448
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataag 287  Q
    |||| |||||||||||||||||| ||  |||   |||||| ||| || |||||||||| ||||||||||| ||||| |||||    
T  42817529 taagcgtttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcatataag 42817448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 11393518 - 11393454
Alignment:
Q  207 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||||||||| ||||  |||| ||||||| ||| || |||||| |||||| ||||    
T  11393518 aagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaa 11393454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 11410179 - 11410115
Alignment:
Q  207 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||||||||| ||||  |||| ||||||| ||| || |||||| |||||| ||||    
T  11410179 aagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaa 11410115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 13866828 - 13866896
Alignment:
Q  228 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 296  Q
    ||||| |||||||||||| ||| || |||||||||| ||||||| ||| ||| | |||| |||||||||    
T  13866828 ttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataagct 13866896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 29729839 - 29729923
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataag 287  Q
    ||||||||| ||||| |||||||| ||| | |||  ||||||  |||||| |||||||| |||||| || ||| |||||||||||    
T  29729839 aattaagtgattatcgtataagtgcttacgtatatgctatttttataacaaaagataaattaaagtgaaactgttttcacataag 29729923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 36114662 - 36114614
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    ||||||| |||||||||| ||| ||| |||||| |||||||||||||||    
T  36114662 ataagtgcttatgcataacctagttctataacaaaagataaaataaagt 36114614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 43431590 - 43431534
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    |||||||||||||||| ||| ||||  |||||| |||||| |||||||| |||||||    
T  43431590 ttatcatataagtgttaatgtataagttatttcaataacaaaagataaagtaaagtc 43431534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 30259633 - 30259528
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 312  Q
    |||||||| ||||| ||||||| || ||||||| |||||| || ||||||||||||||| ||||||| | |||||||||||||||| | |||||||||||    
T  30259633 ttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctat 30259534  T
Q  313 cttgga 318  Q
    | ||||    
T  30259533 catgga 30259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 45999460 - 45999354
Alignment:
Q  187 ataaacaatttaattaaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataa 286  Q
    |||||||| ||||||||||||| |  ||||   ||||||| | ||| |||| ||||||| |||||| ||||||| |||||||||| ||||||||| ||||    
T  45999460 ataaacaacttaattaaattaaattcttatagcataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataa 45999361  T
Q  287 gctataa 293  Q
    |||||||    
T  45999360 gctataa 45999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 18434621 - 18434545
Alignment:
Q  216 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 292  Q
    ||||||||||| || || || | |||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||    
T  18434621 tcatataagtgcttctgtattacctatttccataacaaaagataaaataaagtcaaactgctctcatataagctata 18434545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 4276783 - 4276697
Alignment:
Q  213 ttatcatataagtgttt-atgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||||| ||||| | | |||||||||||| |||||| ||||||| |||||||||  ||| ||||||||||||||||| ||||    
T  4276783 ttatcatataaatgttttaagtataaactatttctataacaaaagataatataaagtcatactgttttcacataagctataacctgt 4276697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 44032147 - 44032065
Alignment:
Q  211 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    |||||||||||||||||||||| |||| |  |||| |||||| ||| ||||||||||||||  || ||||| |||||||||||    
T  44032147 gtttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 15360827 - 15360904
Alignment:
Q  222 aagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtc 299  Q
    ||||||||||| || |  |||||| |||||| |||||||||||||||||| ||| ||||| |||||||||||| ||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgtc 15360904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 4200153 - 4200232
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 292  Q
    ||||||| |||||||||||  ||||  |||||  |||||| ||||||||||||||||||| || ||||| ||||||||||    
T  4200153 ttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctata 4200232  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 16982082 - 16982027
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    |||||||||||||||||||| ||||  |||||| |||||| |||||||||||||||    
T  16982082 ttatcatataagtgtttatgtataacttatttcgataacaaaagataaaataaagt 16982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 870969 - 871027
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||| ||||| |||||||||||  |||||| |||||||||| |||||||    
T  870969 ttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaa 871027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 4202285 - 4202207
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 281  Q
    ||||||| |||||||||||||||| ||| | ||||  |||||| |||||| ||||||||  |||||||||||| |||||    
T  4202285 aattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaagctgttttca 4202207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 47003014 - 47002965
Alignment:
Q  219 tataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    |||||||||||||||||||| |||||| |||| | |||||||||||||||    
T  47003014 tataagtgtttatgcataaattatttcgataataaaagataaaataaagt 47002965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 49516986 - 49517079
Alignment:
Q  206 taagtgtttatcatataagt-gtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||| ||||||||||||| | |||| || ||||  |||||| |||||| ||||||||||||||||||  || |||||  |||||||||||||||    
T  49516986 taagcgtttatcatataaattgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgt 49517079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 23373448 - 23373368
Alignment:
Q  201 taaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 281  Q
    ||||||||||| ||||||||||| || ||| | || | ||||||| ||| || |||||||||||||||||| ||| |||||    
T  23373448 taaattaagtgcttatcatataactgcttacgtattagctatttctatatcaaaagataaaataaagtcaatctgttttca 23373368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 4338565 - 4338640
Alignment:
Q  206 taagtgtttatcatataagtg-tttatgcataaactatttccataacataagataaaataaagtcaagctgctttc 280  Q
    ||||||||||||||||||||| |||||| ||||  ||| || | |||| |||||||||||||||||| ||| ||||    
T  4338565 taagtgtttatcatataagtgctttatgtataagttatgtctagaacagaagataaaataaagtcaaactgttttc 4338640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 17423070 - 17423003
Alignment:
Q  228 ttatgcataaactatttccataacataa-gataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||| |||| || |||| |||||| || |||||||||||||||||||| ||||| ||||||||||||    
T  17423070 ttatgtataagctttttctataacaaaacgataaaataaagtcaagctgatttcatataagctataag 17423003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 24857658 - 24857619
Alignment:
Q  215 atcatataagtgtttatgcataaactatttccataacata 254  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  24857658 atcatataagtgtttatgtataaactatttctataacata 24857619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 31517860 - 31517793
Alignment:
Q  239 ctatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataa 306  Q
    ||||||| | |||| ||||||||||||||| ||  || ||||| |||||||||||||||||| |||||    
T  31517860 ctatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataa 31517793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 44928297 - 44928222
Alignment:
Q  218 atataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    ||||||||| ||||| |||| |||||||  |  || ||||||| |||||||||||||| ||||| |||||||||||    
T  44928297 atataagtgcttatgtataagctatttcagttgcaaaagataagataaagtcaagctgttttcatataagctataa 44928222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 6659627 - 6659677
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaat 263  Q
    |||||||||||||| ||||| |||||||||||| ||| || ||||||||||    
T  6659627 ttatcatataagtgcttatgtataaactatttctatagcaaaagataaaat 6659677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 7200988 - 7200930
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||| ||||||||||   |||| |||||||||||| | ||||||||||||||||||    
T  7200988 ttatcatgtaagtgtttacttataagctatttccataataaaagataaaataaagtcaa 7200930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 23895260 - 23895318
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||  ||||| |||| ||||||| |||||| ||||||||||||| ||||    
T  23895260 ttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaa 23895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 33527278 - 33527208
Alignment:
Q  228 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||| |||| ||||||| | |||| ||||||||||| |||||| ||| ||||| |||| |||||||||||    
T  33527278 ttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgt 33527208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 39777612 - 39777666
Alignment:
Q  238 actatttccataacataagataaaataaagtcaagctgctttcacataagctata 292  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||| | ||||||||    
T  39777612 actatttctataacaaaagatagaataaagtcaaactgctttcatacaagctata 39777666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 50998469 - 50998555
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 292  Q
    |||| |||||||||||| | | ||||| |||| |||||||  ||||| ||||||||| ||| |||| || |||||| ||||||||||    
T  50998469 taagcgtttatcatataggcgcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctata 50998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 1662499 - 1662548
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaat 263  Q
    ||||||||||||||||||| |||||||| ||| |||||  ||||||||||    
T  1662499 tatcatataagtgtttatgtataaactacttctataacgaaagataaaat 1662548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 2773735 - 2773698
Alignment:
Q  228 ttatgcataaactatttccataacataagataaaataa 265  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  2773735 ttatgcataagctatttccataacagaagataaaataa 2773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 28689579 - 28689494
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacata-aagctatcttgga 318  Q
    |||||||||||| ||| || |||||||||||||  ||||  | ||||| |||||||||||| ||| | |||| |||||||||||||    
T  28689579 ataaactatttctatatcaaaagataaaataaatgcaagtggttttcatataagctataagttgttttcatataagctatcttgga 28689494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 37272687 - 37272638
Alignment:
Q  258 taaaataaagtcaagctgctttcacataagctataagctgtctacataaa 307  Q
    |||||||||||||| ||| ||||| |||||||||||||||| | ||||||    
T  37272687 taaaataaagtcaatctgttttcatataagctataagctgttttcataaa 37272638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 50319231 - 50319284
Alignment:
Q  228 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 281  Q
    ||||| |||| ||||||| |||||| ||||||||||||||||||| || |||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttca 50319284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 7218199 - 7218139
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||| |||||||||||| | ||| ||||||||||||||  || ||||| ||||||||||||    
T  7218199 ataatctatttccataataaaaggtaaaataaagtcaaattgttttcatataagctataag 7218139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 23370445 - 23370369
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagc 288  Q
    ||||||||||||||  ||| | |||| ||||||| || ||| ||||||||| ||||| |||||| ||||| ||||||    
T  23370445 tttatcatataagtacttacgtataagctatttctattacaaaagataaaacaaagtgaagctggtttcatataagc 23370369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 36151637 - 36151593
Alignment:
Q  227 tttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| |||| ||||||| |||||| ||||||||||||||||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaagtcaa 36151593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 38651559 - 38651499
Alignment:
Q  209 gtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    ||||||||||| |||||| ||||| |||| ||| ||| |||||| |||||||| |||||||    
T  38651559 gtgtttatcatgtaagtgcttatgtataagctaattctataacaaaagataaactaaagtc 38651499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 298
Target Start/End: Complemental strand, 40304207 - 40304115
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||||||||||| | || ||| | |||| ||||||  |||||| ||||||||||||| |||   || ||||| ||||| ||||||||||    
T  40304207 taagtgtttatcatattattgcttaggtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgt 40304115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 40358042 - 40357974
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||| |||| |||||||||  |||| |||| ||||||| ||||||   ||||||||||||||||    
T  40358042 aattaagtgcttattatataagtgactatgtataagctatttctataacaatggataaaataaagtcaa 40357974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 42550155 - 42550223
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||||||| ||||| ||||| |||| ||| ||| |  | | ||||||||||||||||||    
T  42550155 aattaagtgtttatcatacaagtgcttatgtataagctagttctacgataaaagataaaataaagtcaa 42550223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 54325183 - 54325100
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 296  Q
    |||||||||||||| || || |||||||||||| || ||| |||||||||||||||||| ||| ||||| ||||||||||||||    
T  54325183 ttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagct 54325100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 18630605 - 18630685
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||   | ||||| ||||||||||||    
T  18630605 tatcatataagcgcttatgcataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataag 18630685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 24929417 - 24929511
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaa 307  Q
    ||||||||||| ||||| || || ||||||||| |||||| |||||||||||||||| | ||| ||||| | |||||||||| ||| | ||||||    
T  24929417 ttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaa 24929511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 30024622 - 30024704
Alignment:
Q  211 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    |||||||||||||||  ||||||||||  |||||| |||||| ||||||||||||||| ||  || ||||| |||||||||||    
T  30024622 gtttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 8469523 - 8469442
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||||||||| ||||||| ||||||| || |||||| |||||||||||| |||||  |||||||| ||| ||| ||||    
T  8469523 ttatcatataagtgcttatgcagaaactatatcaataacagaagataaaataatgtcaaagtgctttcatataggctgtaag 8469442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 4191661 - 4191732
Alignment:
Q  211 gtttatcatataagtgtttatgcataaactatttccataacataagat-aaaataaagtcaagctgctttca 281  Q
    |||||||||||||||| ||||| |||| ||||||| |||||| ||||| ||||||||||||| ||| |||||    
T  4191661 gtttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttca 4191732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 44319874 - 44319956
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 296  Q
    |||||||||||||| | ||| |||||||||||| |||| | |||||||||||||||| | ||| ||||| |||||||| |||||    
T  44319874 ttatcatataagtgctcatgtataaactatttctataaaa-aagataaaataaagtcgaactgttttcatataagctacaagct 44319956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 3662265 - 3662330
Alignment:
Q  205 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||| | |||| ||||| |||||||||| | |||||| ||||||||||||||||||    
T  3662265 ttaagtgtttatcatgttagtgcttatg-ataaactattcctataacaaaagataaaataaagtcaa 3662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 4071806 - 4071887
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||| |||||||||||||||  |||| ||||||| |||||| ||||||||||||||||||  |  ||||| ||||||||||||    
T  4071806 tttaccatataagtgtttatatataa-ctatttctataacaaaagataaaataaagtcaaattattttcatataagctataag 4071887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 4471095 - 4471149
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaag 267  Q
    |||| ||||||||| |||||||||||||||||  |||||| ||||||||||||||    
T  4471095 ttattatataagtgcttatgcataaactatttttataacaaaagataaaataaag 4471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 30338723 - 30338653
Alignment:
Q  228 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||| |||||||||||| |||||| |||||| |||||||| || ||| ||||| ||||||||||| ||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgt 30338653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 51044597 - 51044547
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||| |||| ||||||| |||||| ||||||||||||||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaa 51044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 42641772 - 42641727
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataa 265  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||    
T  42641772 ataagtgtttatgtataagctatttccataacaaaagataaaataa 42641727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 46796935 - 46797000
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| |||||||||||||  |||||||||| |||||| ||||||| | ||||||||||| ||||    
T  46796935 taagtgcttatcatataagttcttatgcataagctattttcataacaaacgataaaataaattcaa 46797000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 21593149 - 21593078
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    |||||| ||||| |||||||||||| |||||  |||||||||||||||||| ||  ||||| |||||||||||    
T  21593149 taagtgcttatgtataaactatttctataactaaagataaaataaagtcaa-ctattttcatataagctataa 21593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 41088311 - 41088363
Alignment:
Q  216 tcatataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    ||||||||||| ||||| ||||||||||| || |||| |||||||||||||||    
T  41088311 tcatataagtgcttatgtataaactattttcacaacaaaagataaaataaagt 41088363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 21157686 - 21157773
Alignment:
Q  207 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||||||||||||||| ||||| || | ||||||  |||||| |  ||||| ||||||||| ||| |||||  |||||||||||    
T  21157686 aagtgtttatcatataagtgcttatgtatcagctattttgataacaaagtataaactaaagtcaaactgttttcatgtaagctataag 21157773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 21683617 - 21683570
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    |||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  21683617 taagtgtttatgtataaactatttctataacaaaagataagataaagt 21683570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 21952506 - 21952557
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||||||| ||||||| |||||| ||| |||||| |||||||    
T  21952506 ataagtgtttatgcataagctatttctataacaaaaggtaaaatcaagtcaa 21952557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 36734816 - 36734875
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||| ||||| |||| || |||| |||||| ||| ||||||||||||||    
T  36734816 tttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaa 36734875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 41050620 - 41050675
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    |||||||||||||||| ||| |||||||||||| |||||| ||||| |||| ||||    
T  41050620 ttatcatataagtgttaatgtataaactatttctataacaaaagatgaaatgaagt 41050675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 41606109 - 41606168
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||| ||||||||||| | |||||||||  |||||| | ||||||||||||||||    
T  41606109 tttatcatacaagtgtttatgtaaaaactattttgataacaaaggataaaataaagtcaa 41606168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 47970245 - 47970300
Alignment:
Q  216 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||| ||||| |||| ||||||| |||||| |||||||||| |||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaa 47970300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 55870453 - 55870406
Alignment:
Q  247 ataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||| ||||| |||||||||||| ||| ||||||||||||||||||    
T  55870453 ataacaaaagatcaaataaagtcaaactgttttcacataagctataag 55870406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 2980624 - 2980578
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataaca 252  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||||||    
T  2980624 taagtgtttatcatataagtgcttatgtataagctatttctataaca 2980578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 32920543 - 32920488
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||||||| |||| ||||||  |||||  ||||||||||||||||||    
T  32920543 tatcatataagtgtttatggataagctatttttataac--aagataaaataaagtcaa 32920488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 46013439 - 46013365
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||||||||  |||||||||||   |||| |||||||||||||||||| ||| ||| | ||||| ||||||    
T  46013439 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 46013365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 51556014 - 51555956
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtca 270  Q
    ||||||||||||||| ||||| |||| |||||   |||||| |||||||||||||||||    
T  51556014 tttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 54277460 - 54277402
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| |||||| ||| || |||||||| ||| |||||| ||||||||||||||||||    
T  54277460 ttatcagataagtatttgtgtataaactacttctataacaaaagataaaataaagtcaa 54277402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 3891501 - 3891555
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    |||||||||||||| ||||| |||||||||||| |||||  | ||||||||||||||    
T  3891501 ttatcatataagtgcttatgaataaactatttctataac--aggataaaataaagtc 3891555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 23819013 - 23819093
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    ||||||||| ||||||||||| ||||  ||||||||||||| || |||||||  |||||| ||| ||||| ||||| |||||    
T  23819013 tttatcatacaagtgtttatgtataagttatttccataaca-aatataaaatgtagtcaaactgttttcatataagttataa 23819093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 27405980 - 27406029
Alignment:
Q  218 atataagtgtttatgcataaactatttccataacataagataaaataaag 267  Q
    |||||||||||||| ||||||||||||| |||  | ||||||||||||||    
T  27405980 atataagtgtttattcataaactatttctatagtaaaagataaaataaag 27406029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 41603549 - 41603484
Alignment:
Q  201 taaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    |||| ||| ||||| ||||||||||| ||||| |||| ||||||  ||||||||||| ||||||||    
T  41603549 taaaataaatgtttgtcatataagtgcttatgtataagctatttatataacataagaaaaaataaa 41603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 43372116 - 43372035
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    |||| ||||||||||||||  |||||  |||||  |||||| ||||||||||| |||||| ||| ||| | |||||||||||    
T  43372116 tttaccatataagtgtttaaacataaggtatttttataacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 7749235 - 7749175
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    |||||||||| |||||||||||||||| |||  ||||||| |||| | |||| ||||||||    
T  7749235 taagtgtttaccatataagtgtttatgtatacgctatttctataataaaagagaaaataaa 7749175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 11264226 - 11264278
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    ||||||||||||| ||||| ||||||||||||  ||| | |||||||||||||    
T  11264226 tatcatataagtgattatgtataaactatttcactaataaaagataaaataaa 11264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 14011148 - 14011212
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaag 267  Q
    ||||||||||||||||||||| || || || |||| ||| ||  |||||| ||||||||||||||    
T  14011148 aattaagtgtttatcatataaatgattgtgtataagctagttttataacaaaagataaaataaag 14011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 19422332 - 19422400
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||| | ||||||||||| || ||||| ||||  |||||| |||||| |||||| |||||||||||    
T  19422332 aattaagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaa 19422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 35958593 - 35958637
Alignment:
Q  227 tttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| |||| ||||||| |||||||||| ||||||||||||||    
T  35958593 tttatgtataagctatttctataacataagttaaaataaagtcaa 35958637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 39438656 - 39438624
Alignment:
Q  239 ctatttccataacataagataaaataaagtcaa 271  Q
    ||||||| |||||||||||||||||||||||||    
T  39438656 ctatttctataacataagataaaataaagtcaa 39438624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 53626729 - 53626785
Alignment:
Q  242 tttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||| |||||| ||||||||||||| ||||  || ||||| ||||||||||||||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgt 53626785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 19177396 - 19177484
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||| |||||||||||||| ||||| |||||||||||| | |||| |||||||||| ||||| | ||| ||||| ||||||||||||    
T  19177396 taagtgattatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataag 19177484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 35135815 - 35135727
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||| ||| |||||||||||||||| ||||  |||||| |||||| |||||||||||||||||| ||  ||||| ||||||||||||    
T  35135815 taagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataag 35135727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 35960338 - 35960396
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaataaagtcaa 35960396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 28586911 - 28586827
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||| ||| ||||| ||| |||||||| |||||| |||||||||||||||||| ||| ||||| ||||  ||||||||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgt 28586827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 985584 - 985635
Alignment:
Q  240 tatttccataacataagataaaataaagtcaagctgctttcacataagctat 291  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  985584 tatttccataacaaaagataaaataaagtcaaactgttttcacataagctat 985635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 14295456 - 14295515
Alignment:
Q  239 ctatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||| |||||| |||||||||||||||||| ||| ||||| ||||||||||||||||    
T  14295456 ctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgt 14295515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 6734045 - 6733983
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    |||||| ||||||||||||||||||||||||| ||||||  |||||  |||||||||||||||    
T  6734045 taagtgattatcatataagtgtttatgcataatctatttttataacgaaagataaaataaagt 6733983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 20982288 - 20982223
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| |||||||||||||| ||||| |||| ||||||| |||||| | ||||||||||||||||    
T  20982288 taagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 32059734 - 32059650
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||||||||| ||||| |||| || |||   |||| ||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  32059734 ttatcatataagtgcttatgtataagctgtttttgtaac-taagataaaataaagtcaaactgttttcatataagctataagctgt 32059650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 32172577 - 32172662
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||| ||| | ||||| |||||||||||| | |||| |||||||||| |||||||| || || || ||||||||||||||||    
T  32172577 ttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgt 32172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 36646166 - 36646231
Alignment:
Q  215 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttc 280  Q
    ||||||||| || |||||||||||||||||  ||||||||||||||| ||||||||| ||| ||||    
T  36646166 atcatataaatgcttatgcataaactatttttataacataagataaactaaagtcaaactgttttc 36646231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 11667102 - 11667166
Alignment:
Q  228 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 292  Q
    |||||||||||||||||| |||||| | ||||||||||||||||| || ||||| || |||||||    
T  11667102 ttatgcataaactatttcaataacaaaggataaaataaagtcaagttgttttcatatgagctata 11667166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 35095939 - 35095871
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||| | |||||||||||||| ||||   ||||||||||| |||||| ||||||||||||||||||    
T  35095939 aattaagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaa 35095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 37063217 - 37063162
Alignment:
Q  216 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||| || ||||| |||||||||||| |||||| ||||||||||||||||||    
T  37063217 tcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaa 37063162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 28578837 - 28578883
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaagctgctttc 280  Q
    |||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  28578837 ataagctatttctataacataagataaaataaagtcaagctgttttc 28578883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 912802 - 912737
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| |||||||||||| ||||||| ||||  |||||| |||||| || |||||||||||||||    
T  912802 taagtgcttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaa 912737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 1019588 - 1019523
Alignment:
Q  215 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttc 280  Q
    ||||||||| || |||||||||||||||||  |||||| |||||||| ||||||||| ||| ||||    
T  1019588 atcatataaatgcttatgcataaactattttaataacaaaagataaactaaagtcaaactgttttc 1019523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 36539670 - 36539751
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||||||||| |||||  ||| ||||||   || || |||||||||||||||||| ||| ||||| ||||||||||||    
T  36539670 ttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataag 36539751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 7096271 - 7096215
Alignment:
Q  215 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| ||||| ||||| |||| ||||||| |||||| ||||||||||||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 7096215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 11790900 - 11790936
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactat 242  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11790900 taagtgtttatcatataagtgcttatgcataaactat 11790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 583885 - 583838
Alignment:
Q  247 ataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||| |||||||||||||||||| ||| ||||| ||||||||||||    
T  583885 ataacagaagataaaataaagtcaaactgttttcatataagctataag 583838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 19113270 - 19113211
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataa 265  Q
    |||||||||||||||||| || ||||| |||||||||||  |||||| || |||||||||    
T  19113270 taagtgtttatcatataattgcttatgtataaactatttttataacaaaaaataaaataa 19113211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 11095611 - 11095557
Alignment:
Q  217 catataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||| ||||| |||||||||||| |||||| | |||| |||||||||||    
T  11095611 catataagtgattatgtataaactatttctataacaaatgatacaataaagtcaa 11095557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 16889674 - 16889744
Alignment:
Q  228 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||| |||| |||||||||||||| |||||||| | ||||||| ||| ||| | | ||||||||||||||    
T  16889674 ttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgt 16889744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 18857538 - 18857488
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||| |||| ||||||| |||||| | ||||||||||||||||    
T  18857538 taagtgtttatgaataagctatttcaataacacacgataaaataaagtcaa 18857488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 3970812 - 3970759
Alignment:
Q  228 ttatgcataaactatttccataacataa-gataaaataaagtcaagctgctttc 280  Q
    ||||| |||||||||||| |||||| || |||||||||||||||| ||||||||    
T  3970812 ttatggataaactatttctataacacaaagataaaataaagtcaatctgctttc 3970759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 8985583 - 8985628
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagata 259  Q
    ||||||||||||||||||||||| |||||||| |||| | ||||||    
T  8985583 tatcatataagtgtttatgcatacactatttctataataaaagata 8985628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 12407806 - 12407726
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||| ||||||| ||| |||| ||||||| |||||| ||||||||||||||| || ||| |||||  |||| ||||||    
T  12407806 ttatcatacaagtgtt-atgtataagctatttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataag 12407726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 13224353 - 13224406
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    |||||||| ||||| ||||| |||| ||||||| |||||| |||||||||||||    
T  13224353 ttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 26516222 - 26516275
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    |||||||||||||| ||||| |||| ||||||| | |||| |||||||||||||    
T  26516222 ttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 32194228 - 32194159
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttc-cataacataagataaaataaagtcaagctgctttca 281  Q
    |||||||||||||| ||||||||| |||| |||  |||||| || |||||||||||||||| || |||||    
T  32194228 ttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttca 32194159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 36638670 - 36638719
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaa 262  Q
    |||||||||| ||||| ||| |||||||||||| |||||| |||||||||    
T  36638670 ttatcatataggtgttaatgtataaactatttctataacaaaagataaaa 36638719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 298
Target Start/End: Complemental strand, 9202901 - 9202809
Alignment:
Q  207 aagtgtttatcat-ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||||||| ||||||| ||||  |||| |||||||  || || ||||||||||||||| ||  || ||||| |||||| |||||||||    
T  9202901 aagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgt 9202809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 10303747 - 10303783
Alignment:
Q  235 taaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  10303747 taaactatttctataacaaaagataaaataaagtcaa 10303783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 11835208 - 11835256
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    ||||||||||||| |||||| ||||  |||||| |||||||||||||||    
T  11835208 ataagtgtttatgtataaaccatttttataacaaaagataaaataaagt 11835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 29117086 - 29116998
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 291  Q
    ||||||| | ||||||||||  || ||||| |||   |||||| |||||| |||||||||||||||||| ||| ||||  |||||||||    
T  29117086 aattaagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 14482121 - 14482184
Alignment:
Q  208 agtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||| |||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||    
T  14482121 agtgcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaa 14482184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 4763849 - 4763927
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||||||||||||  |||||| | |||| ||||||||||||| |||| | | ||||||||||||||||||||||    
T  4763849 ataagtgtttatgcataagttatttcgacaacaaaagataaaataaattcaaaccgttttcacataagctataagctgt 4763927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 39392814 - 39392749
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| ||||||||||||||  |||| |||||||||||| |||||| ||||||||||||||||||    
T  39392814 taagtgcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaa 39392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 10727114 - 10727202
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||| |||||||||||| |||||||||| ||||||| ||| || ||||| ||||||| ||||  || ||||||||||| ||||||    
T  10727114 taagtgttcatcatataagtgcttatgcataagctatttctatagcaaaagatgaaataaattcaaagtgttttcacataagttataag 10727202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 39551359 - 39551301
Alignment:
Q  209 gtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaag 267  Q
    |||||||||||||||||||||||| |||| ||| |||||||| | ||||||||||||||    
T  39551359 gtgtttatcatataagtgtttatgtataacctacttccataataaaagataaaataaag 39551301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 40728564 - 40728506
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||||| ||||||||  |||||| |||||| ||||||||||||||||||    
T  40728564 ttatcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaa 40728506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 5226525 - 5226582
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    ||||||||||||||||||||| |||||| ||||| |||||| |||||||||| |||||    
T  5226525 tttatcatataagtgtttatgtataaacaatttcaataacaaaagataaaatcaagtc 5226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 298
Target Start/End: Complemental strand, 787255 - 787167
Alignment:
Q  210 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||||| |||||| |||||  ||| || ||||| ||||||||||||||||||||||||  || | ||| ||||||||||| ||||    
T  787255 tgtttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataaactgt 787167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 34770817 - 34770897
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||| |||||| ||||| | ||||||||||||| ||| ||||||||||||||||||  || |||||  |||||||||||    
T  34770817 tatcatgtaagtgcttatgtaaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataag 34770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 12972779 - 12972861
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||||||||||| ||||| |||| ||||||| |||||| ||||| ||||||| | || ||| |||||  |||||||||||    
T  12972779 tttatcatataagtgcttatgtataagctatttcaataacagaagatgaaataaaattaaactggtttcatgtaagctataag 12972861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 1470981 - 1470917
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||| ||||||| |||| | ||||||||||||||||||  | |||||| ||||||||||||||||    
T  1470981 ataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgt 1470917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 293
Target Start/End: Complemental strand, 6918333 - 6918245
Alignment:
Q  205 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    ||||||| |||| |||||||||||| |  |||| ||||||  |||| | |||||||||||||||||| ||| ||||  |||||||||||    
T  6918333 ttaagtgcttataatataagtgtttgtatataagctatttatataataaaagataaaataaagtcaaactgttttctaataagctataa 6918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 7026654 - 7026738
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 296  Q
    ||||||||||||||| |||||||||| ||| |   |||||| ||||||||||||||| ||  || ||||| ||||| ||||||||    
T  7026654 tttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataaggtataagct 7026738  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 11000686 - 11000626
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||| |||||||||||||| ||||||||||||||||||  || ||||  ||||||||||||    
T  11000686 ataagctatttccataacaaaagataaaataaagtcaaattgttttcgaataagctataag 11000626  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 298
Target Start/End: Original strand, 4558720 - 4558807
Alignment:
Q  211 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||| || |||||||||||| |||| ||||||| |||| | ||||||||||||||| ||  |  ||||| ||| ||||||||||||    
T  4558720 gtttattatgtaagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgt 4558807  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 35298625 - 35298570
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaag 267  Q
    ||||||||||||||| ||||| |||| |||||||  ||||| ||||||||||||||    
T  35298625 tttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaag 35298570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 25872559 - 25872469
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 296  Q
    |||||||||||| |||||||| ||| | |||| |||||| ||| ||| ||||| | ||||||| || ||| ||||| ||||| ||||||||    
T  25872559 taagtgtttatcgtataagtgcttacgtataagctattttcattacaaaagatgatataaagtaaaactgttttcatataagttataagct 25872469  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 1112786 - 1112859
Alignment:
Q  222 aagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagc 295  Q
    ||||| ||||| |||  ||||||| |||||| |||||||||||| || ||  || |||||||||||||||||||    
T  1112786 aagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataagc 1112859  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 2364626 - 2364561
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||||||| | |||||| |||  ||||||  ||| || ||||||||||||||||||    
T  2364626 taagtgtttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaagtcaa 2364561  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 3645969 - 3645884
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 291  Q
    ||||||||||||||||||||| || || |||| ||||||| |||| | || |||||| ||| |||| ||  ||||| |||||||||    
T  3645969 taagtgtttatcatataagtgcttgtgtataagctatttctataagaaaatataaaacaaaatcaaactattttcatataagctat 3645884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 8062232 - 8062297
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||| |||||||||| ||||||||||| ||| ||  |||| |||||| | ||||||||||||||||    
T  8062232 taagcgtttatcatagaagtgtttatgtatacaccctttctataacaaatgataaaataaagtcaa 8062297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 11056813 - 11056732
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||||||||||| |||||| | ||||||| |||||| |||  ||||||||||  | ||  ||||| ||||||||||||    
T  11056813 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataag 11056732  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 29973013 - 29973086
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||| ||||  |||| |||||||  ||||| ||| |||||||||||||| ||  ||||||||||||||||||    
T  29973013 taagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataag 29973086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 30988138 - 30988053
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||||||| ||| || ||||  |||||| ||||||  | |||||||||| |||| ||||||| | ||||| ||||||||||    
T  30988138 ttatcatataagtttttttgtataatttatttcaataacaagatataaaataaaatcaaactgcttttaaataagttataagctgt 30988053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 298
Target Start/End: Complemental strand, 28769492 - 28769400
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||| ||||||||||| || ||||| |||| ||||| | |||||| |  ||||||| ||||||| ||  ||||  ||||||||||||||||    
T  28769492 taagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgt 28769400  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 33209367 - 33209283
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 296  Q
    ||||||||| |||||| |||  |||| ||||||| ||||   |||||||||||||||| | ||| ||||| |||| |||||||||    
T  33209367 tttatcatacaagtgtctataaataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataagct 33209283  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 41028997 - 41028919
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 291  Q
    |||||||||||||| ||||| |||| ||||||| |||||| |||| ||||||||||||| ||| ||||| |||||||||    
T  41028997 ttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataagctat 41028919  T

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Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 38462205 - 38462290
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||||||||||||||  |||| ||||||| ||| || |||||||||||||||||| ||| ||||| ||| ||||||| ||||    
T  38462205 ttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgt 38462290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 25183134 - 25183049
Alignment:
Q  214 tatcatataagtgttta-tgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||||||||||| || |||||||||||  |||||| ||||| ||||||||| |||||  ||||| || |||||||||||||    
T  25183134 tatcatataagtgtttaatgtataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctataagctgt 25183049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 34958254 - 34958314
Alignment:
Q  215 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctg 275  Q
    ||||||||||   ||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  34958254 atcatataagcacttatgaataaactatttctataacacaagataaaataaagtcaagctg 34958314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 27792789 - 27792872
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagct 289  Q
    |||| |||||||||||||||| ||||| |||| ||||||| | |||| |||||||||||| ||||| ||  ||||| |||||||    
T  27792789 taagagtttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagct 27792872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 36139809 - 36139883
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||| ||||| |||| |||||||  ||| |||||||||||||||||||| ||| ||||  ||||||||||||    
T  36139809 ataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataag 36139883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 20192744 - 20192667
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||| ||||| |||| ||||||  |||||| |||||||||||||||||| | | ||||| |||| |||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgt 20192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 32703061 - 32703142
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    |||||||||||| |||||||| |||| ||||||| || | | ||||||||||||| ||||  || ||||| |||||||||||    
T  32703061 tttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 34954031 - 34954080
Alignment:
Q  237 aactatttccataacataagataaaataaagtcaagctgctttcacataa 286  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||| ||||    
T  34954031 aactatttctataacacaagataaaataaagtcaagctgttttcatataa 34954080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 36101492 - 36101573
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||| ||||||| ||||| |||| |||||||  ||| |||||||||||||||||||| ||| ||||  |||| |||||||    
T  36101492 ttatcaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataag 36101573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 49587041 - 49586984
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctat 291  Q
    |||| ||||||| |||||| |||||||||||||||||| ||| ||||| |||||||||    
T  49587041 ataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 288
Target Start/End: Complemental strand, 52450204 - 52450123
Alignment:
Q  207 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagc 288  Q
    |||||||||||||| ||||  |||||||||| | ||||| |||||| ||||| |||||||||||| | | ||||| ||||||    
T  52450204 aagtgtttatcatacaagtacttatgcataagcaatttctataacaaaagatgaaataaagtcaaacagttttcaaataagc 52450123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 25185907 - 25185974
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||||||||||||| ||||| ||||  |||||  |||||| ||||| ||||||||||||    
T  25185907 aattaagtgtttatcatataagtgcttatgaataagatatttatataacaaaagat-aaataaagtcaa 25185974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 43116577 - 43116493
Alignment:
Q  210 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||||||| |||||||||||  ||| ||||||| |||||| |||||||||| || |||| |   ||||| ||||||||||||    
T  43116577 tgtttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataag 43116493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 40122900 - 40122818
Alignment:
Q  211 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||| ||| |||  ||||| |||| ||||||| |||||| |||||||||||||||||| ||| ||||| | ||||||||||    
T  40122900 gtttatcgtatcagtacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataag 40122818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 28283733 - 28283675
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaa 261  Q
    ||||||| |||||||||||||||| ||||||||||  || ||| |||||| ||||||||    
T  28283733 aattaagcgtttatcatataagtgcttatgcataagttacttctataacaaaagataaa 28283675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 32663560 - 32663614
Alignment:
Q  207 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaa 261  Q
    |||||||||||||| || |||||||||||||  |||||| |||||| ||||||||    
T  32663560 aagtgtttatcatacaattgtttatgcataagttatttctataacaaaagataaa 32663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 44374790 - 44374732
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||| ||||| |||| |||| ||  ||||| ||||||||||||||||||    
T  44374790 ttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaa 44374732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 53457301 - 53457359
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||| |||||||||| | |||| ||| ||| |||||| ||||||||||||||||||    
T  53457301 ttatcatttaagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaa 53457359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 905115 - 905058
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||| | ||| | |||| ||||||| |||||| ||||||||||||||||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaa 905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 24268308 - 24268243
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||| |||||||||| ||||| ||||| |||||||||||| ||| || ||| |||||| |||||||    
T  24268308 taagcgtttatcatacaagtgcttatgtataaactatttctatagcaaaagttaaaatcaagtcaa 24268243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 2128390 - 2128342
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    ||||| ||||||| |||| ||||||| |||||| |||||||||||||||    
T  2128390 ataagcgtttatgtataagctatttctataacaaaagataaaataaagt 2128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 2201093 - 2201137
Alignment:
Q  254 aagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||| |||||||| ||| ||||| ||||||||||||||||    
T  2201093 aagataaaacaaagtcaaactgttttcatataagctataagctgt 2201137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 12923430 - 12923390
Alignment:
Q  254 aagataaaataaagtcaagctgctttcacataagctataag 294  Q
    |||||||||||||||||| ||||||||  ||||||||||||    
T  12923430 aagataaaataaagtcaaactgctttcttataagctataag 12923390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 16790241 - 16790181
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    |||| |||||||||||||||| ||||  ||||  |||||| |||||| |||||||||||||    
T  16790241 taagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 20349630 - 20349566
Alignment:
Q  205 ttaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    ||||||| ||||||||||||||||| || |||| |||||||  ||||| | |||||||| |||||    
T  20349630 ttaagtgcttatcatataagtgtttgtgtataagctatttcagtaacaaaggataaaatgaagtc 20349566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 24887408 - 24887344
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||| ||||||| ||||||  ||||||||||||||||| |||  |||| |||||||| |||||||    
T  24887408 ataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgt 24887344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 33405290 - 33405211
Alignment:
Q  236 aaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttg 316  Q
    |||||||||| ||| || ||| ||||||||||| ||  || ||||| |||||||||||||||| | ||| |||||||||||    
T  33405290 aaactatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcat-aagctatcttg 33405211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 2456884 - 2456943
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 281  Q
    |||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  2456884 taagtgcttatgtataaactatttcgataaca-aagataaaataaagtcaagctgctttca 2456943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 31672614 - 31672546
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 281  Q
    |||||||| ||||||||||| ||||||||||||||| ||| || ||||||||||||||| ||| |||||    
T  31672614 ttatcatacaagtgtttatgtataaactatttccatgacaaaaaataaaataaagtcaaactgttttca 31672546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 21959651 - 21959732
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    ||||||||| ||||| ||| | |||| |||||||||||||| ||||||||||||||||||  || || || |||||||||||    
T  21959651 tttatcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctataa 21959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 3169391 - 3169312
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 292  Q
    |||||||||||||| |||||  ||| ||||||| |||||| ||||| ||||||| || | ||| ||||||||||||||||    
T  3169391 ttatcatataagtgcttatgtgtaacctatttctataacaaaagatgaaataaattcgaactgttttcacataagctata 3169312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 7713950 - 7714025
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagct 289  Q
    ||||||||||| | ||||| |||||||| || ||||||| ||||||||||||||||||  || ||||| |||||||    
T  7713950 tatcatataagagcttatgtataaactactttcataacaaaagataaaataaagtcaaattgttttcatataagct 7714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 8349810 - 8349755
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||||||||||||||    
T  8349810 ttatcatataagtgtttgtgtataaactatttctctaacaaaagataaaataaagt 8349755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 8010271 - 8010348
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 281  Q
    |||||||||||||||||||||||| ||| | |||| ||||||| |||||| |  ||||||||||||||| || ||||||    
T  8010271 aattaagtgtttatcatataagtgcttaggtataagctatttctataaca-acaataaaataaagtcaatctactttca 8010348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 29269820 - 29269878
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||| || || || |||||||||||| |||||| ||||||||||||||||||    
T  29269820 ttatcatataaatgcttgtgtataaactatttctataacagaagataaaataaagtcaa 29269878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 10452505 - 10452412
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaa 307  Q
    |||||||| |||| ||||| |||| ||||||| |||||| || |||||||||| |||| ||  ||||| |||||||||||| ||| | ||||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgtttccataaa 10452412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 29274375 - 29274290
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||| || || ||||| |||| ||||||| ||| || ||||||||||||||||||  || ||||| ||||||||||| ||||    
T  29274375 ttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgt 29274290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 34671224 - 34671139
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||| |||||||||||| | |||| ||||||| |||||| ||||| |||| |||||||||| | ||  ||||| |||||||||||    
T  34671224 ttatcgtataagtgtttacgaataagctatttctataacacaagattaaattaagtcaagcttcgtttgcataatctataagctgt 34671139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 281973 - 281909
Alignment:
Q  234 ataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||| ||||| | |||||| ||||||||||||||||||  || ||||| ||||||||||||||||    
T  281973 ataagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgt 281909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 1810445 - 1810393
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    ||||||||||||| ||||||| || ||||||| |||||| |||||||||||||    
T  1810445 tatcatataagtgcttatgcaaaagctatttctataacaaaagataaaataaa 1810393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 3204687 - 3204611
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagcta 290  Q
    ||||||||||||| ||| | |||||||| ||| |||| | |||||||||||||||| | ||| ||||| ||||||||    
T  3204687 tatcatataagtgcttacgaataaactacttctataataaaagataaaataaagtcgaactgttttcatataagcta 3204611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 13360659 - 13360719
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagc 273  Q
    |||||||||||||| |||||   |||||||||| |||||| || |||||||||||||||||    
T  13360659 ttatcatataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtcaagc 13360719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 4248885 - 4248940
Alignment:
Q  216 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||| ||||  |||| ||||||| |||||| ||||||||||||||||||    
T  4248885 tcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaa 4248940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 10032495 - 10032582
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtct 300  Q
    ||||||||||| |||||||| |||| ||||||  ||||||  || | |||||||| ||| ||  ||||| ||||||||||||||||||    
T  10032495 ttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataagctgtct 10032582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 30523855 - 30523918
Alignment:
Q  207 aagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtca 270  Q
    |||||||||||||||||||| || || | ||  |||||||| |||| |||||||||||||||||    
T  30523855 aagtgtttatcatataagtgcttttgtacaagttatttccacaacagaagataaaataaagtca 30523918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 298
Target Start/End: Complemental strand, 33787877 - 33787806
Alignment:
Q  227 tttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||| |||||||||||| |||||| || |||||| ||||||||  || ||||| ||||| ||||||||||    
T  33787877 tttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgt 33787806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 2514626 - 2514684
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||| |||||| ||||| |||| ||||||| |||| | ||||||||||||||||||    
T  2514626 ttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaa 2514684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 4006645 - 4006719
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||| ||||||||||  |||||| |||||| | ||||||||||||||||  || ||| | ||||||||||||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataag 4006719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 4247785 - 4247731
Alignment:
Q  208 agtgtttatcatataagtgtttatgcataaactatttccataacataagataaaa 262  Q
    |||||||||||| |||||| ||||| |||| ||||||| |||||| |||||||||    
T  4247785 agtgtttatcatgtaagtgcttatgtataagctatttctataacaaaagataaaa 4247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 5550059 - 5550141
Alignment:
Q  216 tcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||||| ||||| ||| | |||||| |||| |  |||||| ||||||||||  || ||||| ||||||||||||||||    
T  5550059 tcatataagtgcttatgtatatagtatttcgataataagagataacataaagtcaaattgttttcatataagctataagctgt 5550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 24774682 - 24774740
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||| |||||| ||||  |||||||||||| |||||| || |||||||||||||||    
T  24774682 ttatcatgtaagtgcttatatataaactatttctataacaaaatataaaataaagtcaa 24774740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 292
Target Start/End: Complemental strand, 32386712 - 32386630
Alignment:
Q  210 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctata 292  Q
    ||||||||||||||||| ||||| ||| ||||||||  ||| | |||||||||||| |||||  || ||||| ||||| ||||    
T  32386712 tgtttatcatataagtgcttatgtatagactatttcactaagaaaagataaaataaggtcaaattgttttcatataaggtata 32386630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 32513741 - 32513806
Alignment:
Q  206 taagtgtttat-catataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||| ||||| |||||||||||||||  |||||| |||||| || |||||||||||||||    
T  32513741 taagtgtttattcatattagtgtttatgcataagttatttctataaca-aaaataaaataaagtcaa 32513806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 33911434 - 33911372
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    |||||| |||| ||||||||||||||| |||| ||||||  |||||| ||||| |||||||||    
T  33911434 taagtgattataatataagtgtttatgtataatctatttttataacaaaagatcaaataaagt 33911372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 24836340 - 24836287
Alignment:
Q  218 atataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||| |||||| ||||  |||||| |||||| ||||||||||||||||||    
T  24836340 atataagtatttatgtataagttatttctataacaaaagataaaataaagtcaa 24836287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 10400183 - 10400286
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagat-aaaataaagtcaagctgctttcacataagctataagctgtcta 301  Q
    ||||||| | ||||||||||| |||||||| |||| ||||||  |||| | ||||| |||||||||||||  || | ||| |||||||||||| |||||     
T  10400183 aattaagggcttatcatataaatgtttatgtataagctattt-tataataaaagataaaaataaagtcaaattgttatcatataagctataagatgtctt 10400281  T
Q  302 cataa 306  Q
    |||||    
T  10400282 cataa 10400286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 35095075 - 35095015
Alignment:
Q  211 gtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||||  ||||| |||||| ||||| |||||| || ||||||||| |||||    
T  35095075 gtttatcatataagtaattatgtataaaccatttctataacaaaatataaaataatgtcaa 35095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 35536031 - 35536114
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagct 296  Q
    |||||||||||  | ||||| |||| ||||||| |||||||||||||||||||||||||  || ||||| ||||| ||||||||    
T  35536031 ttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataagct 35536114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 30496629 - 30496686
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||| ||||||||||||| |||||||||||| |||||| || |||||||||||||||    
T  30496629 tatcacataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaa 30496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 27481443 - 27481359
Alignment:
Q  210 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| | |||||||  ||||||| ||| || || ||||||||||||    
T  27481443 tgtttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataag 27481359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 5373138 - 5373205
Alignment:
Q  202 aaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    |||||||||| ||||||| |||||| ||||| |||  ||||||| |||||| ||||||||||||||||    
T  5373138 aaattaagtgcttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 30751432 - 30751499
Alignment:
Q  204 attaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||||||||||| || || |||||||||||   ||||| || |||||||||||||||    
T  30751432 attaagtgtttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaa 30751499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 27548186 - 27548291
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagcta 311  Q
    |||||| |||||||| ||||  |||| |||||||| || || |||||||||||||||| |  || |||||  ||||||||||||||| | ||| ||||||    
T  27548186 tttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcat-aagcta 27548284  T
Q  312 tcttgga 318  Q
    |||||||    
T  27548285 tcttgga 27548291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 46223212 - 46223162
Alignment:
Q  219 tataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    |||||||||||||| |||| |||||||||||||| |||||||| |||||||    
T  46223212 tataagtgtttatgtataagctatttccataacaaaagataaattaaagtc 46223162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 49060464 - 49060522
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||    
T  49060464 ttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaa 49060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 1431461 - 1431396
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||| |||||||||||||||||||| ||||  |||||||||||   || |||||||||||||||    
T  1431461 taagtgcttatcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaa 1431396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 7244625 - 7244694
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttca 281  Q
    ||||||||||||||| ||||| |||| ||||||| ||| || ||||||||| |||||||| ||| |||||    
T  7244625 tttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttca 7244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 31002693 - 31002770
Alignment:
Q  221 taagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||| ||||| |||||||||||| |  ||| ||||||||||||||||||  |  ||||| ||||||||||||||||    
T  31002693 taagtgcttatgtataaactatttcaaccacaaaagataaaataaagtcaaaatattttcatataagctataagctgt 31002770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 45593872 - 45593791
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataag 287  Q
    |||| ||||||||||||| || ||||| |||| |||||||  ||||| || ||||||||||||||| ||| ||||| |||||    
T  45593872 taagagtttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataag 45593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 47004008 - 47004069
Alignment:
Q  210 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||||||||||   ||| ||||||| ||||||  |||||||||||||||||    
T  47004008 tgtttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaa 47004069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 294
Target Start/End: Original strand, 1417201 - 1417269
Alignment:
Q  226 gtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 294  Q
    ||||||| |||||||||||  |||||| ||||||||||||||||||  || ||||| |||||| |||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataag 1417269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 27626280 - 27626212
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||  ||||| |||||||| |||| ||||||| ||| || ||| ||||||||||||||    
T  27626280 aattaagtgtttatgctataattgtttatgtataagctatttctatatcaaaagctaaaataaagtcaa 27626212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 39551694 - 39551614
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    ||||||||||||| |||| | |||| ||||||| |||||| |||||| | |||||| || ||| ||||| |||||||||||    
T  39551694 ttatcatataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataa 39551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 33894544 - 33894622
Alignment:
Q  210 tgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagct 289  Q
    |||| ||||| |||||| ||||| |||| ||||||| |||||| |||||||||| ||||||| ||| ||||| |||||||    
T  33894544 tgttcatcatgtaagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagct 33894622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 2223072 - 2223130
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||| |||||||||||||| |||| ||||||| |||||| ||||||||  ||||||||    
T  2223072 ttatcgtataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaa 2223130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 11721372 - 11721314
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||||| |  |||||||||||| |||||| ||| ||||| ||||||||    
T  11721372 ttatcatataagtgtttctttataaactatttctataacaaaagttaaaagaaagtcaa 11721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 15328535 - 15328585
Alignment:
Q  218 atataagtgtttatgcataaactatttccataacataagataaaataaagt 268  Q
    ||||||||| |||||||||| ||||||| |||| | |||||||||||||||    
T  15328535 atataagtgcttatgcataatctatttctataataaaagataaaataaagt 15328585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 25511551 - 25511609
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||||  || ||||| |||||| |||||| ||||| ||||||||||||    
T  25511551 ttatcatataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaa 25511609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 36598474 - 36598408
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaag 272  Q
    |||||||||||||||| |||||||||| |||| ||||||| || |||| || | ||| |||||||||    
T  36598474 taagtgtttatcatattagtgtttatgtataagctatttctatgacatgaggttaaagaaagtcaag 36598408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 5272954 - 5272881
Alignment:
Q  225 tgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    |||||||| |||||||||||  |||||| |||||||||| ||||||   || ||||| |||||||| |||||||    
T  5272954 tgtttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataagctagaagctgt 5272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 297
Target Start/End: Original strand, 22759109 - 22759194
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctg 297  Q
    ||||||||||||| |||||||  ||| ||||||  |||||| ||||||||||||||  ||  || ||||| |||||||| ||||||    
T  22759109 tttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctg 22759194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 29574757 - 29574688
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaag 272  Q
    ||||||| ||||||||||||| || ||||| |||| ||||||  || ||| ||||| |||||||||||||    
T  29574757 aattaagcgtttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataaagtcaag 29574688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 30133980 - 30134057
Alignment:
Q  220 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctg 297  Q
    ||||||||||||| |||| ||||||  | |||| ||||||||||||||||||  || ||||  ||||||| |||||||    
T  30133980 ataagtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagctttaagctg 30134057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 35809041 - 35808992
Alignment:
Q  222 aagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||| |||| ||||||| |||||| ||||||||||| ||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaa 35808992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 47006972 - 47007025
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    |||||||||||||| ||||| ||||||| |||| |||||| ||||| |||||||    
T  47006972 ttatcatataagtgcttatgtataaactttttctataacaaaagatcaaataaa 47007025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 2048146 - 2048094
Alignment:
Q  254 aagataaaataaagtcaagctgctttcacataagctataagctgtctacataa 306  Q
    |||||||| ||||||||| ||| ||||| |||||||||||||| | |||||||    
T  2048146 aagataaattaaagtcaaactgatttcagataagctataagctttttacataa 2048094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 5006639 - 5006575
Alignment:
Q  229 tatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataa 293  Q
    |||| |||| ||||| | |||||| |||||||||||||||||| ||| ||||| ||||| |||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataa 5006575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 12110299 - 12110386
Alignment:
Q  228 ttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctatcttg 316  Q
    ||||| |||| ||||||| || ||| ||||||||||||||||||  || |||   |||||||||||||||| | ||| |||||||||||    
T  12110299 ttatgaataacctatttctattacacaagataaaataaagtcaaattgttttggtataagctataagctgttttcat-aagctatcttg 12110386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 24973870 - 24973926
Alignment:
Q  215 atcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||| ||||| | || ||||||| |||||| ||||||||||||| ||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaa 24973926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 27389300 - 27389344
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataa 250  Q
    |||||| |||||||||||||||||||| |||| ||||||| ||||    
T  27389300 taagtgcttatcatataagtgtttatgtataagctatttctataa 27389344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 42281655 - 42281587
Alignment:
Q  203 aattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||||||||| |||||| ||| |||| ||||||| || ||| |  ||||||| |||||||    
T  42281655 aattaagtgtttatcatatgagtgttaatgtataagctatttctatgacaaacaataaaatgaagtcaa 42281587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 46091505 - 46091573
Alignment:
Q  198 aattaaattaagtgtttatcatataagtgtttatgcataaactatttccataacataagataaaataaa 266  Q
    |||| ||| |||||||||||| || |||| |||||||||| ||||| | |||||  |||||||||||||    
T  46091505 aatttaatgaagtgtttatcacatgagtgcttatgcataagctattcctataacgaaagataaaataaa 46091573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 1219 - 1162
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||| ||||| |||| ||||||| |||||| ||||||||||||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 1162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 2756 - 2813
Alignment:
Q  214 tatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    ||||||||||||| ||||| |||| ||||||| |||||| ||||||||||||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 2813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 5942 - 5999
Alignment:
Q  212 tttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtc 269  Q
    ||||||||||||||||||||| |||||| ||||| |||||| |||||||||| |||||    
T  5942 tttatcatataagtgtttatgtataaacaatttcaataacaaaagataaaatcaagtc 5999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 27500 - 27603
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataagctgtctacataaagctat 312  Q
    ||||||| |||||| ||||| ||||  |||||| |||||| ||||||||||||||||||  || ||||| |||| ||||||| ||| | |||||| ||||    
T  27500 ttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaa-ctat 27598  T
Q  313 cttgg 317  Q
    |||||    
T  27599 cttgg 27603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 6783 - 6725
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||| ||||| |||||||||||| |||||| || ||||| | |||||||    
T  6783 ttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 6725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 143207 - 143141
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgcttt 279  Q
    |||||||||||| | ||||| || | ||||||| |||||| |||||||||||| ||||| |||||||    
T  143207 ttatcatataagcgcttatgaattagctatttctataacacaagataaaataatgtcaaactgcttt 143141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 116702 - 116644
Alignment:
Q  213 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 271  Q
    |||||||||||||| ||||| |||||||||||| |||||| || ||||| | |||||||    
T  116702 ttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 116644  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 298
Target Start/End: Complemental strand, 4377 - 4284
Alignment:
Q  206 taagtgtttatcatataagtgtttatgcataaactatttccataacata-agataaaataaagtcaagctgctttcacataagctataagctgt 298  Q
    ||||||||| ||||||| ||| ||||  |||| ||||||| |||| | | ||||||||||||||||| | | ||||| |||| |||||||||||    
T  4377 taagtgtttctcatatatgtgcttatatataatctatttctataaaaaagagataaaataaagtcaaaccgttttcatataaactataagctgt 4284  T

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