View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19897_low_29 (Length: 304)
Name: NF19897_low_29
Description: NF19897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19897_low_29 |
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Alignment Details
Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 38 - 288
Target Start/End: Original strand, 1657902 - 1658152
Alignment:
| Q |
38 |
gtcctaaatgttattgatatcaagacagtccttaggttgacatgtaccatatatagaatgtaaagcattcttttgtgtgcagaatatatcacgttattct |
137 |
Q |
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| T |
1657902 |
gtcctaaatgttattgatatcaagacagtccttaggttgacatgtaccatatatagaatgtaaagcattcttttgtgtgcagaatatatcacgttattct |
1658001 |
T |
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| Q |
138 |
ctgaataattaaacttattatcaattcactccatgcattaccaaacttaatatcaattcagtctgtatgacctggatatagtaaatggttcaccggtaga |
237 |
Q |
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| T |
1658002 |
ctgaataattaaacttattatcaattcactccatgcattaccaaacttaatatcaattcagtctgtatgacctggatatagtaaatggttcaccggtaga |
1658101 |
T |
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| Q |
238 |
atgataatgtaccaaacattatggagtaaatggttcaagtacataacatat |
288 |
Q |
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| T |
1658102 |
atgataatgtaccaaacattatagagtaaatggttcaagtacataacatat |
1658152 |
T |
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