View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19897_low_3 (Length: 560)

Name: NF19897_low_3
Description: NF19897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19897_low_3
NF19897_low_3
[»] chr4 (83 HSPs)
chr4 (1-318)||(28034526-28034838)
chr4 (382-545)||(28034200-28034363)
chr4 (382-511)||(760194-760322)
chr4 (377-523)||(4955334-4955480)
chr4 (390-523)||(2740693-2740826)
chr4 (384-513)||(36629240-36629369)
chr4 (391-524)||(3244482-3244615)
chr4 (382-515)||(34544105-34544241)
chr4 (384-523)||(22183288-22183427)
chr4 (382-521)||(23556888-23557027)
chr4 (377-502)||(15841385-15841510)
chr4 (384-513)||(50002429-50002558)
chr4 (384-509)||(50630779-50630904)
chr4 (409-513)||(16888865-16888969)
chr4 (409-524)||(20826209-20826324)
chr4 (394-513)||(41707499-41707617)
chr4 (379-518)||(44620658-44620796)
chr4 (403-524)||(2741063-2741184)
chr4 (384-513)||(39792884-39793013)
chr4 (391-510)||(15841016-15841134)
chr4 (384-523)||(25483329-25483468)
chr4 (398-513)||(34646687-34646802)
chr4 (391-513)||(55933155-55933277)
chr4 (384-513)||(32941147-32941276)
chr4 (384-513)||(39404021-39404150)
chr4 (409-518)||(54017644-54017753)
chr4 (384-501)||(54108928-54109044)
chr4 (384-523)||(52884688-52884828)
chr4 (395-523)||(54741213-54741341)
chr4 (398-513)||(41370360-41370475)
chr4 (397-523)||(52884880-52885007)
chr4 (409-523)||(3341121-3341235)
chr4 (384-513)||(36572022-36572151)
chr4 (388-518)||(49302902-49303034)
chr4 (384-523)||(22027985-22028124)
chr4 (384-523)||(36608685-36608824)
chr4 (398-513)||(49880163-49880278)
chr4 (384-518)||(34004609-34004741)
chr4 (409-507)||(44620362-44620460)
chr4 (377-498)||(18932766-18932887)
chr4 (384-523)||(1731671-1731810)
chr4 (428-523)||(11348396-11348491)
chr4 (398-501)||(45496820-45496923)
chr4 (394-497)||(54936215-54936318)
chr4 (384-518)||(3340805-3340939)
chr4 (409-523)||(10245913-10246026)
chr4 (385-507)||(44621011-44621133)
chr4 (384-514)||(50459723-50459853)
chr4 (384-513)||(39404401-39404530)
chr4 (391-528)||(6876131-6876265)
chr4 (384-510)||(20825842-20825968)
chr4 (384-523)||(22028393-22028534)
chr4 (409-503)||(54017751-54017845)
chr4 (397-462)||(31691206-31691271)
chr4 (398-510)||(6975494-6975606)
chr4 (427-523)||(49076515-49076611)
chr4 (384-523)||(4390125-4390264)
chr4 (398-513)||(16889574-16889689)
chr4 (384-518)||(49076855-49076988)
chr4 (398-506)||(54343046-54343147)
chr4 (421-513)||(7147703-7147794)
chr4 (447-523)||(12197371-12197447)
chr4 (409-462)||(3271841-3271894)
chr4 (455-523)||(3700358-3700426)
chr4 (398-462)||(23817719-23817783)
chr4 (439-483)||(41603270-41603314)
chr4 (398-513)||(43174509-43174625)
chr4 (409-513)||(45489381-45489484)
chr4 (415-523)||(51768115-51768223)
chr4 (384-471)||(43827485-43827571)
chr4 (449-508)||(44620304-44620363)
chr4 (384-513)||(54108541-54108669)
chr4 (463-513)||(50788086-50788136)
chr4 (409-482)||(23630338-23630411)
chr4 (439-488)||(31249937-31249986)
chr4 (449-518)||(44621424-44621493)
chr4 (409-461)||(1868106-1868158)
chr4 (440-472)||(6875857-6875889)
chr4 (397-461)||(10396186-10396250)
chr4 (400-444)||(11706584-11706628)
chr4 (421-481)||(29802576-29802636)
chr4 (421-461)||(45484774-45484814)
chr4 (395-495)||(48111733-48111833)
[»] chr2 (70 HSPs)
chr2 (382-523)||(30313171-30313311)
chr2 (382-513)||(29874047-29874178)
chr2 (384-524)||(40679655-40679795)
chr2 (377-524)||(28531333-28531480)
chr2 (409-523)||(33561502-33561616)
chr2 (382-523)||(29873561-29873702)
chr2 (384-513)||(42514652-42514781)
chr2 (399-523)||(30323457-30323581)
chr2 (398-513)||(41283515-41283630)
chr2 (384-513)||(15880266-15880395)
chr2 (409-513)||(962601-962705)
chr2 (397-512)||(28254276-28254391)
chr2 (384-513)||(6421388-6421517)
chr2 (384-513)||(36178631-36178760)
chr2 (384-513)||(37105927-37106056)
chr2 (391-523)||(16542442-16542574)
chr2 (391-524)||(41678401-41678535)
chr2 (398-513)||(14745707-14745822)
chr2 (409-524)||(33953822-33953937)
chr2 (384-513)||(36005906-36006034)
chr2 (384-513)||(5542651-5542780)
chr2 (384-513)||(5543024-5543153)
chr2 (388-513)||(37106191-37106316)
chr2 (384-518)||(7598226-7598360)
chr2 (384-509)||(15511521-15511646)
chr2 (377-498)||(36178190-36178311)
chr2 (398-518)||(35580764-35580883)
chr2 (409-518)||(3594229-3594338)
chr2 (421-485)||(2336655-2336719)
chr2 (384-500)||(6422126-6422242)
chr2 (428-523)||(31899496-31899591)
chr2 (393-523)||(33954297-33954426)
chr2 (384-518)||(7598607-7598733)
chr2 (409-523)||(31468801-31468911)
chr2 (407-523)||(12910221-12910337)
chr2 (398-510)||(14745334-14745446)
chr2 (385-513)||(31385740-31385868)
chr2 (411-523)||(38796673-38796785)
chr2 (429-508)||(29676543-29676622)
chr2 (382-515)||(30312790-30312924)
chr2 (409-508)||(37895112-37895211)
chr2 (390-513)||(40733520-40733643)
chr2 (384-511)||(29676908-29677040)
chr2 (409-513)||(36178320-36178424)
chr2 (384-511)||(33731653-33731780)
chr2 (409-523)||(37632648-37632762)
chr2 (409-513)||(6712979-6713084)
chr2 (384-513)||(12529054-12529183)
chr2 (427-500)||(28254181-28254254)
chr2 (439-523)||(38796299-38796383)
chr2 (435-518)||(1769890-1769973)
chr2 (384-503)||(23346250-23346368)
chr2 (410-513)||(34481269-34481372)
chr2 (385-523)||(9231242-9231380)
chr2 (390-524)||(18204416-18204550)
chr2 (455-505)||(40163470-40163520)
chr2 (384-513)||(5367458-5367587)
chr2 (384-523)||(16590881-16591015)
chr2 (417-485)||(2323647-2323714)
chr2 (459-523)||(36785664-36785728)
chr2 (384-453)||(6421794-6421863)
chr2 (428-485)||(13154451-13154508)
chr2 (421-510)||(37894755-37894844)
chr2 (384-444)||(3672773-3672833)
chr2 (397-458)||(35580477-35580540)
chr2 (384-463)||(3673121-3673200)
chr2 (409-523)||(31259667-31259784)
chr2 (455-501)||(42515031-42515077)
chr2 (421-518)||(7784619-7784716)
chr2 (479-523)||(43443103-43443147)
[»] chr1 (68 HSPs)
chr1 (377-524)||(19283474-19283621)
chr1 (384-524)||(22077521-22077661)
chr1 (382-523)||(1188612-1188753)
chr1 (384-513)||(26661548-26661677)
chr1 (398-513)||(5320005-5320120)
chr1 (377-513)||(17294580-17294717)
chr1 (384-523)||(66498-66637)
chr1 (391-494)||(10351182-10351285)
chr1 (384-513)||(22793281-22793411)
chr1 (397-523)||(24600353-24600479)
chr1 (377-523)||(37850619-37850765)
chr1 (393-518)||(1187399-1187524)
chr1 (389-513)||(32594747-32594871)
chr1 (384-523)||(41142365-41142505)
chr1 (384-513)||(44290850-44290980)
chr1 (382-523)||(34364918-34365059)
chr1 (384-516)||(3537625-3537757)
chr1 (384-524)||(30630664-30630804)
chr1 (384-523)||(3875357-3875496)
chr1 (398-513)||(34649441-34649556)
chr1 (377-523)||(34364500-34364646)
chr1 (411-513)||(44290511-44290613)
chr1 (384-513)||(38804381-38804510)
chr1 (426-523)||(41184493-41184590)
chr1 (384-513)||(48588514-48588643)
chr1 (377-523)||(9955900-9956048)
chr1 (398-513)||(3550723-3550838)
chr1 (384-523)||(39066226-39066365)
chr1 (400-523)||(41156984-41157107)
chr1 (384-513)||(26661924-26662053)
chr1 (393-513)||(47379813-47379940)
chr1 (384-524)||(24448269-24448409)
chr1 (384-491)||(22077136-22077243)
chr1 (384-523)||(41157368-41157507)
chr1 (384-518)||(22077855-22077988)
chr1 (384-513)||(37556114-37556243)
chr1 (427-524)||(44685448-44685546)
chr1 (388-513)||(40082410-40082534)
chr1 (384-508)||(14318875-14318999)
chr1 (426-510)||(24132053-24132137)
chr1 (398-514)||(50052063-50052179)
chr1 (399-524)||(66128-66255)
chr1 (398-513)||(29798202-29798317)
chr1 (384-523)||(31767187-31767326)
chr1 (398-513)||(41759486-41759601)
chr1 (439-513)||(3537228-3537302)
chr1 (397-510)||(5575110-5575223)
chr1 (409-513)||(11977283-11977387)
chr1 (391-501)||(44091909-44092019)
chr1 (441-528)||(45084368-45084457)
chr1 (384-513)||(37555733-37555861)
chr1 (447-523)||(4878796-4878872)
chr1 (417-485)||(12772903-12772971)
chr1 (398-472)||(44043812-44043886)
chr1 (439-513)||(50556454-50556528)
chr1 (479-524)||(22077243-22077288)
chr1 (384-453)||(32168724-32168793)
chr1 (398-506)||(5528794-5528902)
chr1 (439-523)||(21378122-21378206)
chr1 (457-524)||(50469180-50469247)
chr1 (377-523)||(5996891-5997036)
chr1 (409-489)||(4956218-4956298)
chr1 (390-482)||(30576615-30576707)
chr1 (382-445)||(47380191-47380254)
chr1 (479-513)||(45839630-45839664)
chr1 (440-470)||(48000099-48000129)
chr1 (458-523)||(35530414-35530479)
chr1 (484-513)||(50051777-50051806)
[»] chr6 (45 HSPs)
chr6 (382-523)||(6071125-6071266)
chr6 (382-524)||(12092506-12092648)
chr6 (384-524)||(10074389-10074529)
chr6 (384-513)||(3409262-3409391)
chr6 (398-523)||(8481920-8482044)
chr6 (375-524)||(10073633-10073780)
chr6 (384-513)||(29518506-29518635)
chr6 (384-513)||(29518923-29519052)
chr6 (384-513)||(32741182-32741311)
chr6 (377-513)||(16107681-16107817)
chr6 (398-513)||(2378129-2378244)
chr6 (384-523)||(2579898-2580037)
chr6 (397-524)||(10074030-10074157)
chr6 (384-513)||(2578469-2578597)
chr6 (384-513)||(16454578-16454707)
chr6 (409-513)||(2377757-2377861)
chr6 (384-512)||(3415462-3415590)
chr6 (409-513)||(14748389-14748493)
chr6 (377-513)||(35210207-35210343)
chr6 (384-523)||(12085060-12085198)
chr6 (384-518)||(12071717-12071851)
chr6 (384-510)||(16454913-16455039)
chr6 (382-510)||(1127366-1127494)
chr6 (398-514)||(6999836-6999952)
chr6 (398-513)||(3058229-3058344)
chr6 (392-511)||(32460614-32460733)
chr6 (384-514)||(1950211-1950341)
chr6 (388-513)||(26544052-26544177)
chr6 (404-521)||(31714666-31714781)
chr6 (384-513)||(1846751-1846880)
chr6 (384-513)||(3409663-3409792)
chr6 (451-523)||(33605647-33605719)
chr6 (384-511)||(2579518-2579645)
chr6 (391-510)||(9062383-9062501)
chr6 (384-513)||(5832053-5832181)
chr6 (457-506)||(33605985-33606034)
chr6 (409-513)||(593760-593864)
chr6 (427-513)||(10911568-10911655)
chr6 (426-513)||(16108066-16108153)
chr6 (409-510)||(2843560-2843662)
chr6 (400-513)||(2578877-2578989)
chr6 (427-510)||(5958672-5958755)
chr6 (442-485)||(34661693-34661736)
chr6 (436-483)||(5034899-5034946)
chr6 (456-513)||(2579203-2579260)
[»] chr8 (76 HSPs)
chr8 (399-526)||(4154707-4154834)
chr8 (382-523)||(4154305-4154445)
chr8 (382-523)||(9620702-9620841)
chr8 (400-519)||(45121952-45122071)
chr8 (384-518)||(45122083-45122217)
chr8 (384-513)||(3038316-3038445)
chr8 (384-513)||(3669690-3669819)
chr8 (373-517)||(147450-147594)
chr8 (398-523)||(9608738-9608863)
chr8 (431-523)||(41972151-41972243)
chr8 (396-523)||(9309348-9309475)
chr8 (398-513)||(33113407-33113522)
chr8 (384-513)||(3670063-3670192)
chr8 (384-513)||(5420654-5420783)
chr8 (377-513)||(25561834-25561971)
chr8 (384-513)||(34834879-34835008)
chr8 (384-513)||(40518585-40518714)
chr8 (409-509)||(34835216-34835316)
chr8 (409-523)||(8918815-8918929)
chr8 (384-509)||(70300-70425)
chr8 (377-506)||(18372013-18372142)
chr8 (384-513)||(30359612-30359741)
chr8 (384-513)||(30441084-30441217)
chr8 (398-513)||(30359274-30359389)
chr8 (384-523)||(5915865-5915999)
chr8 (384-502)||(45122638-45122756)
chr8 (384-509)||(9482630-9482755)
chr8 (384-513)||(37544516-37544645)
chr8 (384-513)||(40518072-40518203)
chr8 (421-513)||(40991756-40991848)
chr8 (377-511)||(2467507-2467639)
chr8 (409-523)||(6876913-6877028)
chr8 (384-513)||(1014271-1014400)
chr8 (409-518)||(5274773-5274882)
chr8 (400-513)||(40579548-40579661)
chr8 (384-513)||(20870599-20870730)
chr8 (459-523)||(20995502-20995566)
chr8 (384-513)||(1013897-1014026)
chr8 (384-513)||(6731907-6732027)
chr8 (433-494)||(34219208-34219269)
chr8 (409-509)||(34835481-34835582)
chr8 (409-509)||(34835747-34835848)
chr8 (409-513)||(1513966-1514070)
chr8 (400-491)||(9483229-9483320)
chr8 (398-493)||(9609108-9609203)
chr8 (377-509)||(18371680-18371807)
chr8 (398-513)||(32640572-32640682)
chr8 (382-512)||(43398092-43398225)
chr8 (444-518)||(18372785-18372859)
chr8 (439-509)||(41416252-41416322)
chr8 (388-453)||(6651557-6651622)
chr8 (454-523)||(9620384-9620453)
chr8 (431-512)||(18373004-18373085)
chr8 (411-524)||(9308969-9309084)
chr8 (410-494)||(15836450-15836528)
chr8 (439-523)||(33831971-33832055)
chr8 (384-523)||(147822-147952)
chr8 (421-484)||(4715308-4715371)
chr8 (455-518)||(18372353-18372416)
chr8 (443-506)||(25561729-25561792)
chr8 (400-474)||(9507824-9507898)
chr8 (409-523)||(43274830-43274944)
chr8 (390-483)||(27856164-27856257)
chr8 (402-474)||(32305519-32305591)
chr8 (409-512)||(18380068-18380171)
chr8 (382-437)||(20995440-20995495)
chr8 (412-518)||(45123004-45123108)
chr8 (484-518)||(18372497-18372531)
chr8 (439-485)||(40417600-40417646)
chr8 (390-488)||(40417748-40417846)
chr8 (386-419)||(34629729-34629762)
chr8 (384-437)||(40579295-40579348)
chr8 (115-165)||(1357158-1357205)
chr8 (483-523)||(18645712-18645752)
chr8 (393-513)||(30486257-30486377)
chr8 (409-513)||(45121707-45121810)
[»] chr3 (75 HSPs)
chr3 (382-524)||(47964542-47964684)
chr3 (384-513)||(43346817-43346946)
chr3 (384-523)||(12114588-12114727)
chr3 (398-524)||(21832385-21832509)
chr3 (399-518)||(39336270-39336389)
chr3 (384-518)||(29644607-29644741)
chr3 (409-523)||(46546376-46546490)
chr3 (393-523)||(47964950-47965080)
chr3 (382-513)||(25317161-25317292)
chr3 (384-513)||(22304572-22304701)
chr3 (384-523)||(29644928-29645067)
chr3 (384-513)||(52634679-52634807)
chr3 (389-513)||(35946525-35946649)
chr3 (390-513)||(33175691-33175819)
chr3 (384-523)||(33803278-33803417)
chr3 (398-513)||(37990679-37990794)
chr3 (384-523)||(39914245-39914384)
chr3 (384-523)||(42342414-42342553)
chr3 (384-518)||(15772852-15772986)
chr3 (395-513)||(53118012-53118129)
chr3 (386-523)||(25739453-25739590)
chr3 (395-523)||(8327897-8328025)
chr3 (398-513)||(37991017-37991132)
chr3 (384-523)||(54017842-54017981)
chr3 (384-513)||(32462926-32463056)
chr3 (384-523)||(41359791-41359926)
chr3 (377-523)||(45395672-45395818)
chr3 (410-518)||(1634366-1634475)
chr3 (384-509)||(3135099-3135224)
chr3 (409-513)||(4823658-4823762)
chr3 (426-518)||(7767382-7767474)
chr3 (385-524)||(9240141-9240280)
chr3 (384-523)||(42342116-42342255)
chr3 (400-513)||(39389073-39389186)
chr3 (393-513)||(45901716-45901837)
chr3 (447-511)||(36986037-36986101)
chr3 (447-511)||(37011476-37011540)
chr3 (399-523)||(54018239-54018363)
chr3 (398-513)||(49336727-49336842)
chr3 (409-523)||(15773185-15773299)
chr3 (410-523)||(32589697-32589809)
chr3 (384-507)||(39934981-39935104)
chr3 (390-476)||(39336002-39336088)
chr3 (400-506)||(42584864-42584970)
chr3 (409-518)||(3384317-3384426)
chr3 (442-523)||(31190010-31190091)
chr3 (421-510)||(54451239-54451328)
chr3 (409-461)||(16871010-16871062)
chr3 (476-523)||(12747870-12747917)
chr3 (421-523)||(33809071-33809173)
chr3 (396-516)||(11661951-11662072)
chr3 (409-478)||(12749207-12749276)
chr3 (384-513)||(25755397-25755526)
chr3 (440-513)||(50612534-50612607)
chr3 (432-513)||(51886564-51886645)
chr3 (409-462)||(52634994-52635047)
chr3 (398-523)||(53577357-53577482)
chr3 (421-485)||(2417348-2417412)
chr3 (396-448)||(53596543-53596595)
chr3 (388-458)||(22303689-22303759)
chr3 (397-474)||(33362334-33362409)
chr3 (466-523)||(2299969-2300026)
chr3 (464-513)||(22304249-22304298)
chr3 (421-513)||(25991406-25991498)
chr3 (384-447)||(3135480-3135543)
chr3 (410-461)||(17735043-17735094)
chr3 (410-461)||(19036312-19036363)
chr3 (420-483)||(33153589-33153652)
chr3 (464-523)||(43346643-43346702)
chr3 (392-474)||(44160579-44160660)
chr3 (452-510)||(54769708-54769766)
chr3 (484-513)||(11661538-11661567)
chr3 (409-446)||(16868434-16868471)
chr3 (398-513)||(22303995-22304103)
chr3 (400-461)||(54017590-54017651)
[»] chr7 (57 HSPs)
chr7 (384-523)||(1085642-1085781)
chr7 (384-523)||(7517573-7517712)
chr7 (384-513)||(30244273-30244402)
chr7 (390-523)||(7554018-7554151)
chr7 (384-523)||(24177428-24177567)
chr7 (398-513)||(30245080-30245195)
chr7 (390-513)||(45434639-45434762)
chr7 (384-513)||(22567065-22567193)
chr7 (388-513)||(37533041-37533165)
chr7 (384-513)||(45433244-45433373)
chr7 (409-513)||(22566713-22566817)
chr7 (384-523)||(23403-23542)
chr7 (410-513)||(16569199-16569302)
chr7 (410-513)||(16596360-16596463)
chr7 (391-510)||(34218067-34218186)
chr7 (421-523)||(41910657-41910759)
chr7 (398-513)||(29157568-29157683)
chr7 (384-523)||(40094800-40094939)
chr7 (397-523)||(118340-118466)
chr7 (399-513)||(6054563-6054677)
chr7 (428-526)||(28301613-28301711)
chr7 (445-506)||(10341842-10341903)
chr7 (384-509)||(11845198-11845323)
chr7 (382-524)||(37345908-37346052)
chr7 (375-523)||(8128458-8128606)
chr7 (384-516)||(37533390-37533522)
chr7 (393-523)||(4124123-4124253)
chr7 (398-475)||(30253533-30253610)
chr7 (399-523)||(36534825-36534949)
chr7 (415-523)||(43241488-43241596)
chr7 (409-523)||(1085299-1085414)
chr7 (384-523)||(36939759-36939898)
chr7 (384-514)||(9901647-9901775)
chr7 (399-513)||(14681513-14681627)
chr7 (412-514)||(20599316-20599418)
chr7 (395-513)||(47129098-47129216)
chr7 (398-470)||(28300293-28300366)
chr7 (384-513)||(45754719-45754847)
chr7 (390-518)||(15902298-15902426)
chr7 (384-508)||(19122740-19122863)
chr7 (390-518)||(36622958-36623086)
chr7 (384-511)||(30032572-30032699)
chr7 (384-523)||(24838727-24838867)
chr7 (398-518)||(40230331-40230451)
chr7 (450-523)||(30245487-30245560)
chr7 (450-523)||(30255332-30255405)
chr7 (434-495)||(10342275-10342338)
chr7 (441-485)||(42282101-42282145)
chr7 (457-523)||(30244694-30244760)
chr7 (384-518)||(41854633-41854766)
chr7 (450-523)||(36109009-36109082)
chr7 (470-518)||(37345559-37345607)
chr7 (382-445)||(37345652-37345715)
chr7 (439-498)||(45335547-45335605)
chr7 (477-513)||(36967348-36967384)
chr7 (429-513)||(42730319-42730403)
chr7 (434-482)||(46899401-46899448)
[»] chr5 (62 HSPs)
chr5 (384-513)||(1028543-1028672)
chr5 (397-523)||(31509616-31509743)
chr5 (397-523)||(36568606-36568732)
chr5 (384-524)||(41632774-41632914)
chr5 (382-513)||(36521920-36522051)
chr5 (382-513)||(36522261-36522392)
chr5 (384-523)||(13415786-13415925)
chr5 (382-513)||(26074615-26074746)
chr5 (382-524)||(26074170-26074312)
chr5 (384-518)||(40296341-40296475)
chr5 (398-510)||(9498694-9498806)
chr5 (383-502)||(31509745-31509865)
chr5 (398-513)||(18603160-18603275)
chr5 (375-513)||(299492-299630)
chr5 (384-513)||(24489232-24489359)
chr5 (384-506)||(34753051-34753173)
chr5 (409-513)||(6224199-6224303)
chr5 (385-513)||(6500826-6500953)
chr5 (384-511)||(38427553-38427679)
chr5 (409-516)||(41170634-41170741)
chr5 (409-523)||(12662703-12662817)
chr5 (384-518)||(35150005-35150138)
chr5 (384-513)||(624199-624328)
chr5 (384-513)||(6500454-6500582)
chr5 (384-513)||(27502062-27502191)
chr5 (409-513)||(32487397-32487500)
chr5 (384-504)||(33747783-33747903)
chr5 (384-513)||(623821-623950)
chr5 (382-523)||(9510544-9510685)
chr5 (398-523)||(25327928-25328053)
chr5 (384-513)||(36492243-36492372)
chr5 (398-513)||(26075201-26075317)
chr5 (407-514)||(2411009-2411116)
chr5 (384-513)||(5723817-5723946)
chr5 (398-523)||(15370092-15370217)
chr5 (384-513)||(26590936-26591065)
chr5 (398-518)||(3295055-3295174)
chr5 (409-509)||(11417028-11417128)
chr5 (398-513)||(26074821-26074937)
chr5 (384-523)||(3295371-3295508)
chr5 (383-515)||(3622914-3623037)
chr5 (439-513)||(26074321-26074395)
chr5 (390-513)||(36527127-36527238)
chr5 (400-513)||(42405638-42405751)
chr5 (391-487)||(19275558-19275653)
chr5 (421-513)||(42508615-42508707)
chr5 (398-513)||(29549295-29549410)
chr5 (398-513)||(300962-301069)
chr5 (382-523)||(41635215-41635356)
chr5 (394-494)||(13786037-13786136)
chr5 (382-466)||(32445935-32446019)
chr5 (455-523)||(35914842-35914910)
chr5 (427-513)||(10351242-10351328)
chr5 (384-429)||(38427306-38427351)
chr5 (384-432)||(795258-795306)
chr5 (453-485)||(2828085-2828117)
chr5 (441-513)||(7768853-7768925)
chr5 (484-524)||(13785735-13785775)
chr5 (421-461)||(34103609-34103649)
chr5 (409-461)||(41340334-41340386)
chr5 (413-461)||(41341510-41341558)
chr5 (477-513)||(42524720-42524756)
[»] scaffold0078 (2 HSPs)
scaffold0078 (398-523)||(5350-5475)
scaffold0078 (377-523)||(4975-5121)
[»] scaffold0702 (2 HSPs)
scaffold0702 (409-513)||(565-669)
scaffold0702 (450-513)||(234-297)
[»] scaffold0734 (2 HSPs)
scaffold0734 (423-523)||(5770-5870)
scaffold0734 (384-523)||(5389-5529)
[»] scaffold0113 (2 HSPs)
scaffold0113 (451-513)||(39841-39903)
scaffold0113 (384-513)||(39460-39588)
[»] scaffold0391 (3 HSPs)
scaffold0391 (398-513)||(1146-1261)
scaffold0391 (397-469)||(1730-1802)
scaffold0391 (465-511)||(3092-3138)
[»] scaffold0171 (1 HSPs)
scaffold0171 (421-523)||(17519-17621)
[»] scaffold0807 (1 HSPs)
scaffold0807 (426-485)||(3109-3168)
[»] scaffold0027 (1 HSPs)
scaffold0027 (384-518)||(47358-47492)
[»] scaffold0504 (1 HSPs)
scaffold0504 (439-513)||(10192-10266)
[»] scaffold0088 (1 HSPs)
scaffold0088 (426-485)||(10196-10255)


Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 28034838 - 28034526
Alignment:
Q  1 aagtaaacgtagtgataaaatattgtggggcattttttgttaatgtgggagttatatcaggcaccaaacccatcttcccatgttagaattcatagcattt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||  ||||||||||||||||||||| |||||||||    
T  28034838 aagtaaacgtagtgttaaaatattgtggggcattttttgttaatgtgggaattatatcag-caccaagtccatcttcccatgttagaattgatagcattt 28034740  T
Q  101 ttggctaagcagcctaatcaaattatcttgtaacgctttattattgcaatcaataaatgatacaagttggccttcctccataaaactttgctgcttttat 200  Q
    ||||||||||||||||||||||||||||||||| ||||    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28034739 ttggctaagcagcctaatcaaattatcttgtaatgctt----attgcaatcaataaatgatacaagttgaccttcctccataaaactttgctgcttttat 28034644  T
Q  201 agataacttcttctctatatttcacaaatactttcgatgtgcgacatttgtttgcaagcactatggactatggtatactataggaagcgtatgtctaccg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28034643 agataacttcttctctatatttcacaaatactttcgatgtgcgacatttgtttgcaagcactatggactatggtatactataggcagcgtatgtctaccg 28034544  T
Q  301 agaagactcattcttata 318  Q
    ||||||||||||||||||    
T  28034543 agaagactcattcttata 28034526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 382 - 545
Target Start/End: Complemental strand, 28034363 - 28034200
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28034363 agcaaccgcataagtgagagagacgccacactcttacctaaaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaacctccacttt 28034264  T
Q  482 tctatccgatgtgggacatataactcacacttacacataacacaacattccaggatatgttttc 545  Q
    ||||||||||| ||||||||||| |||||||| |||| |||||||||||||||  |||||||||    
T  28034263 tctatccgatgcgggacatataattcacacttgcacacaacacaacattccagtgtatgttttc 28034200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 760322 - 760194
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||||| |||||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||| || |||    
T  760322 agcaaccacacaaatgagagagacaccacacttttacc-aaaatcttaaggcaatgagtttatgggtcctctcacttataaagttctcaaccttcatttt 760224  T
Q  482 tctatccgatgtgggacatataactcacac 511  Q
    ||||| ||||||||||||||||||||||||    
T  760223 tctattcgatgtgggacatataactcacac 760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 4955334 - 4955480
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| ||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||| ||||||| || |||| |||||||| |||||||||||      
T  4955334 gctagagcaaccgcacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctta 4955433  T
Q  477 acttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||| || |||||||| || |||||||||||||||||| |||| ||||    
T  4955434 actattttatccgatatgagacatataactcacacttgcacacaaca 4955480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 390 - 523
Target Start/End: Complemental strand, 2740826 - 2740693
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||  || |||||| ||| |||| |||||||| |||||||||||  ||| |||||||||    
T  2740826 cacaagtgagagagacgccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaacctttactgttctatccg 2740727  T
Q  490 atgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||| |||| ||||    
T  2740726 atgtgggacatataactcacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 36629369 - 36629240
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| ||||| ||| |  |||||||    
T  36629369 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttc 36629270  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  36629269 tatccgatgtgggacatataactcacactt 36629240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 391 - 524
Target Start/End: Original strand, 3244482 - 3244615
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    ||||||||||||||||  ||| ||||||| ||||  ||||| |||||||||||||||| |||| ||||||||  ||||||||||  ||||||||||||||    
T  3244482 acaagtgagagagacgacacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccga 3244581  T
Q  491 tgtgggacatataactcacacttacacataacac 524  Q
    |||| |||||||||||||||||| |||| |||||    
T  3244582 tgtgagacatataactcacacttgcacacaacac 3244615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 382 - 515
Target Start/End: Complemental strand, 34544241 - 34544105
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatc-ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactt 480  Q
    |||||||| ||||||||||||||  | ||||||||||| |||| | |||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  34544241 agcaaccgtacaagtgagagagataccacactcttacccaaaaaccttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacctccactt 34544142  T
Q  481 ttctatccgatgtggg--acatataactcacacttac 515  Q
    |||||| ||||||| |  | |||||||||||||||||    
T  34544141 ttctattcgatgtgagatatatataactcacacttac 34544105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 22183288 - 22183427
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||| ||||||||||||||||| ||||||||| | |||| |||||||||||| |||||||||| || | ||||||||| |||||||| |  ||| ||     
T  22183288 caaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttt 22183387  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||| ||||||||||||||| |||| ||||    
T  22183388 tatccgatgtgggatatataactcacacttgcacacaaca 22183427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 382 - 521
Target Start/End: Original strand, 23556888 - 23557027
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||||||| |||||||||  ||||||||| | ||||  |||||||||||| ||||||| |||||| | ||||||| |||||||||||||||||    
T  23556888 agcaaccacacaagtaagagagacgtcacactcttatccaaaactttaaggcaatgattttatggattctcttatttataaaatgttcaacctccacttt 23556987  T
Q  482 tctatccgatgtgggacatataactcacacttacacataa 521  Q
    ||||||||||||   |||| |||||||||||| |||||||    
T  23556988 tctatccgatgtaaaacatttaactcacacttgcacataa 23557027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 377 - 502
Target Start/End: Original strand, 15841385 - 15841510
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| ||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| |||||||  | |||||||||| ||||||||||||||||    
T  15841385 gctagagcaaccacacaagtgagagagacatcacactcttacccaaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacctcc 15841484  T
Q  477 acttttctatccgatgtgggacatat 502  Q
    ||||||||||  |||||| |||||||    
T  15841485 acttttctatttgatgtgagacatat 15841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 50002558 - 50002429
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||| |||||||| | ||||||||||| |||| |||||| |||||  ||||||||| |||| ||||| ||||||||||||||  ||| ||     
T  50002558 caaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttt 50002459  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||| ||||||||||||||||||    
T  50002458 tatccgatgtgagacatataactcacactt 50002429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 384 - 509
Target Start/End: Original strand, 50630779 - 50630904
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  50630779 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattt 50630878  T
Q  484 tatccgatgtgggacatataactcac 509  Q
    |||||||||| |||||||||||||||    
T  50630879 tatccgatgtaggacatataactcac 50630904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 16888865 - 16888969
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| | |||| |||||||||||| |||||||| |||||||| || ||||||||  ||||||||||||||||||||||||||||||||    
T  16888865 acactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactca 16888964  T
Q  509 cactt 513  Q
    |||||    
T  16888965 cactt 16888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 20826324 - 20826209
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||| ||||||||| |  ||| || |||||||||||||||||||||||||    
T  20826324 acactcttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactca 20826225  T
Q  509 cacttacacataacac 524  Q
    || ||  |||||||||    
T  20826224 catttctacataacac 20826209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 394 - 513
Target Start/End: Original strand, 41707499 - 41707617
Alignment:
Q  394 agtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 493  Q
    |||||||||||| | ||||||||||| |||| |||||| ||||||||||||||||||| | |||||||  |||||||||||  ||| || ||||||||||    
T  41707499 agtgagagagacaccacactcttacc-aaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgt 41707597  T
Q  494 gggacatataactcacactt 513  Q
    ||||||||||||||||||||    
T  41707598 gggacatataactcacactt 41707617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 379 - 518
Target Start/End: Complemental strand, 44620796 - 44620658
Alignment:
Q  379 tatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac 478  Q
    |||| ||||||||||||  |||||||  | ||||||||||| |||| |||||||  ||| |||||||||| |||| ||||||||||||||||||||| ||    
T  44620796 tataacaaccgcacaagcaagagagaaaccacactcttacccaaaaccttaaggttatg-gtttatgggtcctcttacttataaagtgttcaacctctac 44620698  T
Q  479 ttttctatccgatgtgggacatataactcacacttacaca 518  Q
    | ||  ||||||||||||||||||||||||||||| ||||    
T  44620697 tatttcatccgatgtgggacatataactcacacttgcaca 44620658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 403 - 524
Target Start/End: Complemental strand, 2741184 - 2741063
Alignment:
Q  403 gacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 502  Q
    ||||| ||||||||||| |||| ||||||||||||   |||||||| |||| |||||||| || ||||||||  ||| ||||||| ||||||||||||||    
T  2741184 gacgccacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatat 2741085  T
Q  503 aactcacacttacacataacac 524  Q
    ||||||||||| ||||||||||    
T  2741084 aactcacacttgcacataacac 2741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 39792884 - 39793013
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||||||||| || | ||||  ||||||| ||||||||| |  |||||||    
T  39792884 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttc 39792983  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||||||||||||||||    
T  39792984 tatctgatgtgggacatataactcacactt 39793013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 391 - 510
Target Start/End: Original strand, 15841016 - 15841134
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    |||||||||||||||  |||||||||||| |||| ||||| |||||| |||||| | | |||||||||||||| |||||| |||||||||||||||| ||    
T  15841016 acaagtgagagagacaatacactcttacccaaaa-cttaaagcaatgggtttatagatcctctcacttataaaatgttcagcctccacttttctatctga 15841114  T
Q  491 tgtgggacatataactcaca 510  Q
    | |||||||||||| |||||    
T  15841115 tatgggacatataattcaca 15841134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 25483468 - 25483329
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||| | |||| ||||||||  ||||||||||  ||| ||     
T  25483468 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattt 25483369  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||| |||||||||||||||||| |||| ||||    
T  25483368 tatccgatgtgagacatataactcacacttgcacacaaca 25483329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 34646687 - 34646802
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||| || |||| | |||||| ||||||||| |  ||| || ||||||||||||||    
T  34646687 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtggga 34646786  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  34646787 catataactcacactt 34646802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 391 - 513
Target Start/End: Original strand, 55933155 - 55933277
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    |||||| |||||||| | ||||||||||| ||||  ||||||||||| |||||||||| |||| |||||||| ||||||||||   ||| || |||||||    
T  55933155 acaagtaagagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccga 55933254  T
Q  491 tgtgggacatataactcacactt 513  Q
    ||| |||||||||||||||||||    
T  55933255 tgtaggacatataactcacactt 55933277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 32941147 - 32941276
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||  ||||||||||| |||| |||||||||||||||||||| |  |||| | |||||| |||||||||||  ||| |||    
T  32941147 caaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttc 32941246  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    | ||||||||  ||||||||||||||||||    
T  32941247 tttccgatgtaagacatataactcacactt 32941276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 39404150 - 39404021
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||||| ||||||||||| |||| ||||| || ||||||||||| || |||| ||||||||||||||||||||  ||| ||     
T  39404150 caaccacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttactcttt 39404051  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||| | |||| |||||||||||||||||||    
T  39404050 tattcaatgtaggacatataactcacactt 39404021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 409 - 518
Target Start/End: Original strand, 54017644 - 54017753
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    |||||||||||||||| |||||||||||| |||||||||| |||| ||||||||  ||||||||||  ||| || |||| || |||||||||||||||||    
T  54017644 acactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactca 54017743  T
Q  509 cacttacaca 518  Q
    ||||| ||||    
T  54017744 cacttgcaca 54017753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 501
Target Start/End: Complemental strand, 54109044 - 54108928
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  54109044 caaccgcacaagcaagagagacaccacactcttacccaaaa-cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 54108946  T
Q  484 tatccgatgtgggacata 501  Q
    ||||||||||||||||||    
T  54108945 tatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 52884828 - 52884688
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacct-aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||||||||||  |||||||| | |||||||||||  |||| |||||||||||| |||||| | |  ||| |||||||| |||||||||||  ||| ||    
T  52884828 caaccgcacaagcaagagagacaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactatt 52884729  T
Q  483 ctatccgatgtgggacatataactcacacttacacataaca 523  Q
     |||||||||||||||||||||||||||||| |||| ||||    
T  52884728 ttatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 523
Target Start/End: Original strand, 54741213 - 54741341
Alignment:
Q  395 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 494  Q
    ||||||||||  ||||||||||| | |||| |||||| ||||  || ||||||| |||| |||||||| |||||||||||  ||||||||||||||||||    
T  54741213 gtgagagagagactacactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtg 54741312  T
Q  495 ggacatataactcacacttacacataaca 523  Q
     ||||||||| |||||||| |||| ||||    
T  54741313 agacatataattcacacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 41370475 - 41370360
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| ||||||||||||| ||||  ||||||||||| |||||||||| |||| |||||||| || |||||| |  ||| || |||||||| |||||    
T  41370475 agagagacactacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttggga 41370376  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  41370375 catataactcacactt 41370360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 52885007 - 52884880
Alignment:
Q  397 gagagagacgctacactcttacct-aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgg 495  Q
    ||||||||| | ||| |||||||  |||| |||||||||||| |||||||| | |||| |||||||| |||||||||||  ||| || ||||||||||||    
T  52885007 gagagagacaccacattcttaccccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgg 52884908  T
Q  496 gacatataactcacacttacacataaca 523  Q
    |||||||||||||||||| |||| ||||    
T  52884907 gacatataactcacacttgcacacaaca 52884880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 409 - 523
Target Start/End: Complemental strand, 3341235 - 3341121
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| ||||||||||  ||||||  |||||||| |||| |||||||||||||| |||||  ||| || ||||| |||||||||||||||||||    
T  3341235 acactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactca 3341136  T
Q  509 cacttacacataaca 523  Q
    ||||| |||| ||||    
T  3341135 cacttgcacacaaca 3341121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 36572151 - 36572022
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||||| ||||||||| | | ||||| ||| |||| ||||||||||||  |||||||||  ||| |||||||| ||||||||| |  ||| ||     
T  36572151 caaccgcacaagcgagagagacaccatactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttt 36572052  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||| ||||||||||||||||||||||||||    
T  36572051 tattcgatgtgggacatataactcacactt 36572022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 518
Target Start/End: Complemental strand, 49303034 - 49302902
Alignment:
Q  388 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcactt--ataaagtgttcaacctccacttttcta 485  Q
    |||| |||| ||||| || | ||||||||||| |||| |||||||||||| |||||||||| |||| ||||  ||||  ||||||||||  |||||| ||    
T  49303034 cgcataagtaagagatacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttactttttta 49302935  T
Q  486 tccgatgtgggacatataactcacacttacaca 518  Q
    |  ||||||||||||||||||||||||||||||    
T  49302934 tttgatgtgggacatataactcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 22027985 - 22028124
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| || ||| ||||||||| | ||| ||||||| |||| |||||||||||  |||||||||| |||| |||||||| |||||||||||    | ||     
T  22027985 caaccacataagcgagagagacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattt 22028084  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||||||||||||| |||||||| |||| ||||    
T  22028085 tatccgatgtgggacatataagtcacacttgcacacaaca 22028124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 36608685 - 36608824
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||| |||||||||||| | ||||||||||| |||| |||||| |||||  ||||||| | |||| |||||| | ||||||||| |  ||| ||     
T  36608685 caaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttt 36608784  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||| ||||||||||||||||||| |||| ||||    
T  36608785 tatccgatgttggacatataactcacacttgcacacaaca 36608824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 49880278 - 49880163
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | || |||||||| |||| ||||||||| || |||||||||| |||| |||||||| |||||||||||  ||| || ||| | ||||||||    
T  49880278 agagagacaccacgctcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtggga 49880179  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  49880178 catataactcacactt 49880163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 518
Target Start/End: Original strand, 34004609 - 34004741
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||||| ||||||||||  ||||||||| | |||| ||||||| ||||||||||||||| |||| ||||||||  ||||||||||  | ||||     
T  34004609 caaccgcacaagggagagagacggcacactcttatcgaaaaccttaagg-aatgagtttatgggtcctcttacttataagttgttcaacctttagtttt- 34004706  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    ||||  ||||| |||||||||||||||||| ||||    
T  34004707 tatcatatgtgtgacatataactcacacttgcaca 34004741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 409 - 507
Target Start/End: Complemental strand, 44620460 - 44620362
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactc 507  Q
    ||||||||||| |||| |||||||||||| ||||||||| ||||| | |||||| |||||||||||  ||| || |||||||||||| |||||||||||    
T  44620460 acactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 377 - 498
Target Start/End: Original strand, 18932766 - 18932887
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||||| ||||| | ||||| |||||||| | |||||||||||||||| |||||||||||| |||||||||| |||| | |||||| || ||||||||      
T  18932766 gctataacaaccactcaagtaagagagacaccacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaaccttt 18932865  T
Q  477 acttttctatccgatgtgggac 498  Q
    ||| || |||||||||| ||||    
T  18932866 actattttatccgatgtaggac 18932887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 1731671 - 1731810
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||||| || | ||||||||||| |||| |||||||||||  |||||||||| |||| | ||||||  ||||||||||  ||| ||     
T  1731671 caaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttt 1731770  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| |||||||||||||||||||||| || |||| ||||    
T  1731771 tatctgatgtgggacatataactcacatttgcacacaaca 1731810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 428 - 523
Target Start/End: Original strand, 11348396 - 11348491
Alignment:
Q  428 taaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||| | ||||| | |||||||||||||||||||||||||||||| || |||| ||||| | |||||||||||||| || |||| ||||    
T  11348396 taaggcaatgaatatatggatcctctcacttataaagtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaaca 11348491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 501
Target Start/End: Complemental strand, 45496923 - 45496820
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| |||||| |||||||||||| ||| |||| |||||||| |||||||||||  ||  || ||||||||||||||    
T  45496923 agagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgtggga 45496824  T
Q  498 cata 501  Q
    ||||    
T  45496823 cata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 54936318 - 54936215
Alignment:
Q  394 agtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 493  Q
    |||||||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| ||||| || |||||||||||  ||| || |||| |||||    
T  54936318 agtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgt 54936219  T
Q  494 ggga 497  Q
    ||||    
T  54936218 ggga 54936215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 518
Target Start/End: Complemental strand, 3340939 - 3340805
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||| |||| | ||||||||||| |||| ||||||||| || |||||||||| |||| |||||||| ||| |||||||  ||| ||     
T  3340939 caaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactcttt 3340840  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
     ||| |||| |||||||||||||||||||| ||||    
T  3340839 catctgatgcgggacatataactcacacttgcaca 3340805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 523
Target Start/End: Complemental strand, 10246026 - 10245913
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| ||||||||  || |||||||| | |||| |||||||| |||||||||||  ||| || ||||||||||||| |||||||||||    
T  10246026 acactcttacccaaaaccttaaggctttgggtttatgg-tcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactca 10245928  T
Q  509 cacttacacataaca 523  Q
    ||||| |||| ||||    
T  10245927 cacttgcacacaaca 10245913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 507
Target Start/End: Complemental strand, 44621133 - 44621011
Alignment:
Q  385 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 484  Q
    |||||||||||  ||||| || | ||||||||||| |||| |||||| ||||||||||||| |  |||| |||||||| |||||||||||  ||| || |    
T  44621133 aaccgcacaagcaagagaaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgtttt 44621034  T
Q  485 atccgatgtgggacatataactc 507  Q
    |||||||||||| |||| |||||    
T  44621033 atccgatgtgggtcatacaactc 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 514
Target Start/End: Complemental strand, 50459853 - 50459723
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | || ||||||||||||| ||||||  |||| ||||||| || |||| ||||||||  ||||||||||  ||| ||     
T  50459853 caaccacacaagcaagagagacaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttataagatgttcaacctttactcttt 50459754  T
Q  484 tatccgatgtgggacatataactcacactta 514  Q
    || ||||||||| ||||||||||||||||||    
T  50459753 taaccgatgtggaacatataactcacactta 50459723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 39404530 - 39404401
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||| |||| || |||| |||||||| ||  |||||||||| |||| |||||||| |||||| ||||  ||| ||     
T  39404530 caaccacacaagcaagagagacaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttt 39404431  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||||||||||||||||    
T  39404430 tatctgatgtgggacatataactcacactt 39404401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 391 - 528
Target Start/End: Original strand, 6876131 - 6876265
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    ||||||||||||||||  ||||| ||| | |||| |||||| | ||| |||||| ||||||||  |||||||||||||| ||||||| |||| |||||||    
T  6876131 acaagtgagagagacgtcacacttttatccaaaaccttaagtcgatgcgtttattggttctct--cttataaagtgttcgacctccagtttt-tatccga 6876227  T
Q  491 tgtgggacatataactcacacttacacataacacaaca 528  Q
    |||  || |||||| |||||||| |||| |||| ||||    
T  6876228 tgtaagatatataaatcacacttgcacacaacaaaaca 6876265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 510
Target Start/End: Complemental strand, 20825968 - 20825842
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||  ||||| || | ||||||||||| |||| |||||||| |   |||||||||| |||| | |||||| |||||||||||  ||| ||     
T  20825968 caaccgcataaggaagagaaacaccacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaacctttactcttt 20825869  T
Q  484 tatccgatgtgggacatataactcaca 510  Q
    |||||||||||| ||||||||||||||    
T  20825868 tatccgatgtggaacatataactcaca 20825842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 22028393 - 22028534
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcca--cttt 481  Q
    ||||| ||||||  |||||||| | ||||||||||| ||||  ||||| |||||||||||||||| |||| ||| |||| |||||||||||  |   |||    
T  22028393 caacctcacaagcaagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttatttttt 22028492  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    | |||||||||| |||||||||| | |||||| |||| ||||    
T  22028493 tttatccgatgtaggacatataagtaacacttgcacacaaca 22028534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 409 - 503
Target Start/End: Original strand, 54017751 - 54017845
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatata 503  Q
    |||||||||||||||| |||||| ||||| |  ||||||| |||| |||||||| |||||||||||  ||| || |||||||||||||| |||||    
T  54017751 acactcttacctaaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggatatata 54017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 31691271 - 31691206
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 462  Q
    |||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||    
T  31691271 gagatagacgccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataa 31691206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 6975494 - 6975606
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| ||||||||||| |||||||||||  ||||  |||||| || |||| ||||||||  | ||||||||  ||| || |||| |||||| ||    
T  6975494 agagagacgccacactcttacccaaaatcttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgaga 6975593  T
Q  498 catataactcaca 510  Q
    |||||||||||||    
T  6975594 catataactcaca 6975606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 427 - 523
Target Start/End: Original strand, 49076515 - 49076611
Alignment:
Q  427 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||| ||||| |||||| ||| |||| |||||||| |||||||||||  ||| || |||||||| ||| ||||||||||||||||| |||| ||||    
T  49076515 ttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaaca 49076611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 4390125 - 4390264
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||| |||||||  |||||||||  ||||||||||| |||| ||||| |||||| | | | || | |||| |||||||| |||||||||||  ||| ||     
T  4390125 caactgcacaagcaagagagacgtcacactcttacccaaaaccttaacgcaatgtgctaaaggatcctcttacttataaggtgttcaacctttactcttt 4390224  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| ||||||||| || |||||||||||| |||| ||||    
T  4390225 tatctgatgtgggatatgtaactcacacttgcacacaaca 4390264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 16889574 - 16889689
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | | ||||||||| ||||  |||||||| |  |||||||  | |||| |||||||| || ||||||||  ||||||||||||||| || ||    
T  16889574 agagagacaccatactcttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgaga 16889673  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  16889674 catataactcacactt 16889689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 518
Target Start/End: Original strand, 49076855 - 49076988
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  ||| |||| | ||||||| ||| |||| |||||||  ||| ||||||||||||||| || ||||| |||||||||||  ||| ||     
T  49076855 caaccgcacaagcaagaaagacaccacactctaacccaaaaccttaaggttatgggtttatgggttctcttac-tataaggtgttcaacctttactattt 49076953  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    || || || ||| ||||||||||||||||| ||||    
T  49076954 tagccaatatggaacatataactcacacttgcaca 49076988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 506
Target Start/End: Original strand, 54343046 - 54343147
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| ||||||||||||       |||| |||| |||||||| |||||||||||  ||| || ||||||||||||||    
T  54343046 agagagacaccacactcttacccaaaaccttaaggcaatg-------gggtcctcttacttataaggtgttcaacctttactattttatccgatgtggga 54343138  T
Q  498 catataact 506  Q
    |||||||||    
T  54343139 catataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 513
Target Start/End: Original strand, 7147703 - 7147794
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||| |||||| || || ||||| |||| |||||||||| |||||||||||||||||||||||||  | ||||| ||| | ||||||||||||    
T  7147703 aaaaccttaagacattgggtttacgggtcctctcactta-aaagtgttcaacctccacttttctaagcaatgtgagacttctaactcacactt 7147794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 12197447 - 12197371
Alignment:
Q  447 gttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||| || |||||||||| || ||||| |||||||||||  |||||||||| |||||||||||||| |||| ||||    
T  12197447 gttctttcgcttataaagtattgaaccttcacttttctatttgatgtgggacctataactcacacttgcacacaaca 12197371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 462
Target Start/End: Complemental strand, 3271894 - 3271841
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 462  Q
    ||||||||||| |||| |||||||||||  ||||||||||||||| ||||||||    
T  3271894 acactcttacccaaaaccttaaggcaataggtttatgggttctcttacttataa 3271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 523
Target Start/End: Complemental strand, 3700426 - 3700358
Alignment:
Q  455 acttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||| ||||||||| |  ||| || |||||||||| ||||||||||||||||||| |||| ||||    
T  3700426 acttataaggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaaca 3700358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 462
Target Start/End: Original strand, 23817719 - 23817783
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 462  Q
    |||||||| | ||||||||||| |||| ||||||||||||||||||||  | |||| ||||||||    
T  23817719 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 483
Target Start/End: Original strand, 41603270 - 41603314
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||    
T  41603270 gtttatgggtcttctcacttataaagtgctcaacctccacttttc 41603314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 43174625 - 43174509
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccact-tttctatccgatgtggg 496  Q
    |||||||||| ||||||||||| || |  ||||||  ||  ||||||| || |||| |||||||| |||||||||||  ||| ||| |||| |||||| |    
T  43174625 agagagacgccacactcttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtg 43174526  T
Q  497 acatataactcacactt 513  Q
     ||||||||||||||||    
T  43174525 gcatataactcacactt 43174509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 45489381 - 45489484
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| ||||||||||  || |  ||||| | ||||||| |||||||  |||||||||||  ||| || ||||||||||| ||||||||| |||    
T  45489381 acactcttaccaaaaatcttaaa-cagtaggtttaagagttctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataattca 45489479  T
Q  509 cactt 513  Q
    |||||    
T  45489480 cactt 45489484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 51768115 - 51768223
Alignment:
Q  415 ttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactta 514  Q
    ||||| |||| |||||| ||||||||||||| || |||| | |||||| ||||||||| |  ||| || ||| |||| | |||||||||||||||| ||     
T  51768115 ttacccaaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatataggacatataactcacatttg 51768214  T
Q  515 cacataaca 523  Q
    |||| ||||    
T  51768215 cacacaaca 51768223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 471
Target Start/End: Complemental strand, 43827571 - 43827485
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaa 471  Q
    ||||||||||||| |||||||| | ||||||||| | |||  ||||||||||||| ||||||||| |||| | |||||| | ||||||    
T  43827571 caaccgcacaagtaagagagacaccacactcttatccaaac-cttaaggcaatgaatttatgggtcctcttatttataaggagttcaa 43827485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 508
Target Start/End: Complemental strand, 44620363 - 44620304
Alignment:
Q  449 tctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||| |||||||| |||||||||||  ||| || ||||| |||||||||||||||||||    
T  44620363 tctcttacttataaggtgttcaacctttactattttatcccatgtgggacatataactca 44620304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 54108669 - 54108541
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagttt-atgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||| ||||||  ||| |||| | ||||||||| | |||| ||||||||||||| ||| |||||| || | |||||||| |||||||||||  ||| ||    
T  54108669 caaccacacaagcaagatagacaccacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaacctttactatt 54108570  T
Q  483 ctatccgatgtgggacatataactcacactt 513  Q
     ||||| || ||||||  |||||||||||||    
T  54108569 ttatcctatatgggac--ataactcacactt 54108541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 513
Target Start/End: Original strand, 50788086 - 50788136
Alignment:
Q  463 agtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||  ||| || ||||||||||||||||||||||| ||||||    
T  50788086 agtgttcaacctttactattttatccgatgtgggacatataacttacactt 50788136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 482
Target Start/End: Complemental strand, 23630411 - 23630338
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||| ||||| ||| ||||||| |  |||||||||| ||  |||||||||||||||||||||| | |||||||    
T  23630411 acacttttacccaaagtcttaagacgttgagtttatgagtcgtctcacttataaagtgttcaactttcactttt 23630338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 488
Target Start/End: Original strand, 31249937 - 31249986
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatcc 488  Q
    |||||||||| |||| |||||||||||||||||| | ||| |||||||||    
T  31249937 gtttatgggtcctctaacttataaagtgttcaacattcacctttctatcc 31249986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 518
Target Start/End: Complemental strand, 44621493 - 44621424
Alignment:
Q  449 tctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacaca 518  Q
    ||||| |||||||| ||||| |||||  ||| || ||||| |||| ||||||||||||||||||| ||||    
T  44621493 tctcttacttataaggtgtttaacctttactgttttatcccatgttggacatataactcacacttgcaca 44621424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 1868158 - 1868106
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    ||||||||||| ||||  ||||||||||| |||||||||||| ||| ||||||    
T  1868158 acactcttacccaaaactttaaggcaatgggtttatgggttccctctcttata 1868106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 440 - 472
Target Start/End: Original strand, 6875857 - 6875889
Alignment:
Q  440 tttatgggttctctcacttataaagtgttcaac 472  Q
    |||||||||||||||||||||||| ||||||||    
T  6875857 tttatgggttctctcacttataaaatgttcaac 6875889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 461
Target Start/End: Complemental strand, 10396250 - 10396186
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    ||||||||| | || ||||||||||||| | |||||||||| ||||||||||  |||| ||||||    
T  10396250 gagagagacaccaccctcttacctaaaaccctaaggcaatgggtttatgggtcttctctcttata 10396186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 11706584 - 11706628
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttat 444  Q
    |||||||| ||||||||||| |||| ||||| |||||||||||||    
T  11706584 agagacgccacactcttacccaaaaccttaaagcaatgagtttat 11706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 481
Target Start/End: Complemental strand, 29802636 - 29802576
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||| ||||||||| || |||||||||| |||||| || | ||||| ||||||||||||||    
T  29802636 aaaaccttaaggcattgggtttatgggtcctctcagttgtcaagtgctcaacctccacttt 29802576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 45484814 - 45484774
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    |||| ||||||||| || |||||||||||||||||||||||    
T  45484814 aaaaccttaaggcattgggtttatgggttctctcacttata 45484774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 48111733 - 48111833
Alignment:
Q  395 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 494  Q
    ||||||||||| | |||||| ||||||||| ||||||| ||||  |||||  || || | |||||||| |||||||||||  ||| || ||||||| |||    
T  48111733 gtgagagagacaccacactcatacctaaaaccttaaggtaatggatttataagtccttttacttataatgtgttcaacctttactcttttatccgaggtg 48111832  T
Q  495 g 495  Q
    |    
T  48111833 g 48111833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 382 - 523
Target Start/End: Complemental strand, 30313311 - 30313171
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  30313311 agcaaccacacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttat-aagtgttcaacctccacttt 30313213  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||||| |||||||||| ||| ||| |||| ||||    
T  30313212 tctatccgatgtgagacatataacacacgcttgcacacaaca 30313171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 29874047 - 29874178
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||||||||||||||| || |||||| ||||||||| | |||| |||||||||||| |||||||||| ||| || |||||||||||||||||||||||||    
T  29874047 agcaaccgcacaagtgggatagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttt 29874146  T
Q  482 tctatccgatgtgggacatataactcacactt 513  Q
    |||||| ||||||||||||||||| |||||||    
T  29874147 tctatctgatgtgggacatataacacacactt 29874178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 384 - 524
Target Start/End: Original strand, 40679655 - 40679795
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||   |||||||    
T  40679655 caaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttc 40679754  T
Q  484 tatccgatgtgggacatataactcacacttacacataacac 524  Q
    |||||||| |||||||||||||||||| || |||| |||||    
T  40679755 tatccgatatgggacatataactcacatttgcacacaacac 40679795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 377 - 524
Target Start/End: Original strand, 28531333 - 28531480
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| |||||| ||| || |||||||| | | ||||||||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||||      
T  28531333 gctagagcaactgcataactgagagagtcaccacactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaaccttt 28531432  T
Q  477 acttttctatccgatgtgggacatataactcacacttacacataacac 524  Q
     |||||||||||||||||||||||||||||||||||| |||| |||||    
T  28531433 gcttttctatccgatgtgggacatataactcacacttgcacacaacac 28531480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 33561502 - 33561616
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  33561502 acactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactca 33561601  T
Q  509 cacttacacataaca 523  Q
    ||||| |||| ||||    
T  33561602 cacttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 382 - 523
Target Start/End: Original strand, 29873561 - 29873702
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| |||||||||||||||||  ||||||||||  |||| |||||||||||||||||||| || ||| |||||||||| |||||||||||||||||    
T  29873561 agcaaccacacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccacttt 29873660  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||| |||||||||||| |||| ||| ||| |||| ||||    
T  29873661 tctatctgatgtgggacatgtaacacacccttgcacacaaca 29873702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 42514781 - 42514652
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||||||||| |||| |||||||| |||||||||||  |||||||    
T  42514781 caaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttc 42514682  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| ||||| |||||||||||||||||||    
T  42514681 tatctgatgtaggacatataactcacactt 42514652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 30323581 - 30323457
Alignment:
Q  399 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 498  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||||| ||| ||||||    
T  30323581 gagagacgccacactcttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttctatctgatttgggac 30323482  T
Q  499 atataactcacacttacacataaca 523  Q
    ||||||| ||||||| |||| ||||    
T  30323481 atataacacacacttgcacacaaca 30323457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 41283515 - 41283630
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  ||| || |||||||| |||||    
T  41283515 agagagacgccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatggga 41283614  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  41283615 catataactcacactt 41283630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 15880395 - 15880266
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  15880395 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttt 15880296  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||||||| |||||||||||||||||    
T  15880295 tatccgatgtggaacatataactcacactt 15880266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 409 - 513
Target Start/End: Complemental strand, 962705 - 962601
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||| ||||| |||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  962705 acactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactca 962606  T
Q  509 cactt 513  Q
    |||||    
T  962605 cactt 962601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 512
Target Start/End: Original strand, 28254276 - 28254391
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 496  Q
    ||||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||  ||||||||||  ||||||||||||||||||||    
T  28254276 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtggg 28254375  T
Q  497 acatataactcacact 512  Q
    |||||||| |||||||    
T  28254376 acatataagtcacact 28254391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 6421517 - 6421388
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| || ||||||||||||||||| || |||| |||||||| |||||||||||  ||| ||     
T  6421517 caaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttt 6421418  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  6421417 tatccgatgtgggacatataactcacactt 6421388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 36178631 - 36178760
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  36178631 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 36178730  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  36178731 tatccgatgtgggacatataactcacactt 36178760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 37106056 - 37105927
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||| |||||  |||||||| | ||||||||||| |||||||||||||||||||||||||||| | || |||||||| |||||||||||  ||| ||     
T  37106056 caaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattt 37105957  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||| ||||||||||||||||||||||||||    
T  37105956 tattcgatgtgggacatataactcacactt 37105927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 523
Target Start/End: Complemental strand, 16542574 - 16542442
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||  || |||| | |||||| |||||||||||  ||| || |||||||    
T  16542574 acaagtgagagagatgctacactcttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccga 16542475  T
Q  491 tgtgggacatataactcacacttacacataaca 523  Q
    |||||||| |||||||||||||| |||| ||||    
T  16542474 tgtgggacttataactcacacttgcacacaaca 16542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 524
Target Start/End: Original strand, 41678401 - 41678535
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    |||||||||||||||| |||||||||||  |||| |||||||||| | |||||||||| ||||||||||||||||||| ||||||| |||||||||| ||    
T  41678401 acaagtgagagagacgttacactcttactcaaaaccttaaggcaaag-gtttatgggtcctctcacttataaagtgtttaacctccccttttctatctga 41678499  T
Q  491 tgtgggac--atataactcacacttacacataacac 524  Q
    |||| |||  ||||||||||||||| |||| |||||    
T  41678500 tgtgagacatatataactcacacttgcacacaacac 41678535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 14745707 - 14745822
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||| ||||||||    
T  14745707 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtggga 14745806  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  14745807 catataactcacactt 14745822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 409 - 524
Target Start/End: Original strand, 33953822 - 33953937
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| ||||| |||||||||   |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||    
T  33953822 acactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggacttataactca 33953921  T
Q  509 cacttacacataacac 524  Q
    || || |||| |||||    
T  33953922 catttgcacacaacac 33953937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 36005906 - 36006034
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||||| ||||| ||||| |||| ||||||||||||||||||||||| |||| |||||||| ||||||||| |  || ||||    
T  36005906 caaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttac-tttc 36006004  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||| ||||||||||||||||||||||||||    
T  36006005 tattcgatgtgggacatataactcacactt 36006034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 5542651 - 5542780
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||  |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  5542651 caaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattt 5542750  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||| |||| |||||||||||||||||||||    
T  5542751 tattcgatatgggacatataactcacactt 5542780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 5543024 - 5543153
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  | |||||| | ||||||||||| ||||||||||||||||  |||||||| | |||| |||||||| |||||||||||  ||| ||     
T  5543024 caaccgcacaagcaatagagacaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattt 5543123  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||||||||||||||||    
T  5543124 tatcggatgtgggacatataactcacactt 5543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 388 - 513
Target Start/End: Complemental strand, 37106316 - 37106191
Alignment:
Q  388 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 487  Q
    ||||||||  ||||| || | ||||||||||| |||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||    
T  37106316 cgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatc 37106217  T
Q  488 cgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||    
T  37106216 cgatgtgggacatataactcacactt 37106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 518
Target Start/End: Complemental strand, 7598360 - 7598226
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||||||||||||||| | | | ||||||| |||| |||||||| |||||||||||||| |||| | |||||| ||||| |||||  |||||||    
T  7598360 caaccgcacaagtgagagagacaccatattcttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttc 7598261  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    ||| |||||| | |||||||| |||||||| ||||    
T  7598260 tattcgatgtagaacatataattcacacttgcaca 7598226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 509
Target Start/End: Original strand, 15511521 - 15511646
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| ||||||||||| ||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  15511521 caaccacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttt 15511620  T
Q  484 tatccgatgtgggacatataactcac 509  Q
    |||||| |||| ||||||||||||||    
T  15511621 tatccgttgtgtgacatataactcac 15511646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 377 - 498
Target Start/End: Original strand, 36178190 - 36178311
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||||| ||||| ||||||  |||||| | | ||||||||||| ||||||||||||||||| |||||||||||| || |||||||| |||||||||||      
T  36178190 gctataacaaccacacaagcaagagaggcaccacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaaccttt 36178289  T
Q  477 acttttctatccgatgtgggac 498  Q
    ||| || |||||||||||||||    
T  36178290 actattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 518
Target Start/End: Original strand, 35580764 - 35580883
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    ||||||||||  |||||||||| |||| |||||||||||| |||||||| | ||||||||||||| ||||||||| |  | | || ||||||||||||||    
T  35580764 agagagacgccgcactcttacccaaaaccttaaggcaatgggtttatgg-tcctctcacttataaggtgttcaacatttattgttttatccgatgtggga 35580862  T
Q  498 catataactcacacttacaca 518  Q
    |||||||||||||||| ||||    
T  35580863 catataactcacacttgcaca 35580883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 518
Target Start/End: Original strand, 3594229 - 3594338
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||  |||||||||| |||||| |||||||| | || ||||||||||||||||| |||||||||||||||| || ||||  ||||| ||||||    
T  3594229 acactcttactcaaaatcttaaagcaatgtgtttatggatcctatcacttataaagtgttcgacctccacttttctattcgttgtgaaacatacaactca 3594328  T
Q  509 cacttacaca 518  Q
    ||||| ||||    
T  3594329 cactttcaca 3594338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 2336719 - 2336655
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  2336719 aaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 2336655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 384 - 500
Target Start/End: Complemental strand, 6422242 - 6422126
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | |||||||||||||||| |||||||| ||| |||||||||| |||| | |||||| |||||||||||  ||||||     
T  6422242 caaccacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttt 6422143  T
Q  484 tatccgatgtgggacat 500  Q
    |||| ||||||||||||    
T  6422142 tatctgatgtgggacat 6422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 428 - 523
Target Start/End: Original strand, 31899496 - 31899591
Alignment:
Q  428 taaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||| |  ||| || |||||||||||| ||||||||||||||||| |||| ||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaaca 31899591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 393 - 523
Target Start/End: Original strand, 33954297 - 33954426
Alignment:
Q  393 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 492  Q
    ||||||||||||||| ||||||||||| |||||| |||||||  || |||||| ||  | | | ||||| | |||| |||||| ||||||||||| ||||    
T  33954297 aagtgagagagacgccacactcttacccaaaatcgtaaggcataga-tttatgagtcatttaagttatataatgtttaacctcaacttttctatctgatg 33954395  T
Q  493 tgggacatataactcacacttacacataaca 523  Q
    ||||||||||||||||||||| |||| ||||    
T  33954396 tgggacatataactcacacttgcacacaaca 33954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 518
Target Start/End: Complemental strand, 7598733 - 7598607
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||||||||||||| | ||||||||||| ||||  ||||||        |||||||| |||| |||||||| |||||||||||  ||||||     
T  7598733 caaccacacaagtgagagagacaccacactcttaccaaaaacgttaagg--------ttatgggtcctcttacttataaggtgttcaacctttacttttt 7598642  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    |||| ||||||||||||||||||||||||| ||||    
T  7598641 tatctgatgtgggacatataactcacacttgcaca 7598607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 31468801 - 31468911
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||    |||||  | ||||||||  ||| || |||||||||||||||||||||||||    
T  31468801 acactcttacccaaaaccttaaggcaatgagtttatgggtcctct----tataagatattcaacctttactattttatccgatgtgggacatataactca 31468896  T
Q  509 cacttacacataaca 523  Q
    ||||| |||| ||||    
T  31468897 cacttgcacacaaca 31468911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 407 - 523
Target Start/End: Complemental strand, 12910337 - 12910221
Alignment:
Q  407 ctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataact 506  Q
    ||||||||||||| |||| |||||| |||||| |||||  ||  | |||||||||| | |||||||||  ||||||| ||||||||||| ||||||||||    
T  12910337 ctacactcttacccaaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaacctgtacttttccatccgatgtggaacatataact 12910238  T
Q  507 cacacttacacataaca 523  Q
    || ||||||||| ||||    
T  12910237 caaacttacacacaaca 12910221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 14745334 - 14745446
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||  ||||| ||  |||||||||   ||| || ||| ||||||||||    
T  14745334 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtggga 14745433  T
Q  498 catataactcaca 510  Q
    |||||||||||||    
T  14745434 catataactcaca 14745446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 385 - 513
Target Start/End: Complemental strand, 31385868 - 31385740
Alignment:
Q  385 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 484  Q
    |||| ||||||||| |||||| | |||||  | || |||| |||||||||||| |||||||||| || |||||||||| ||| |||||||||| ||||||    
T  31385868 aaccacacaagtgaaagagacaccacacttattcccaaaaccttaaggcaatgggtttatgggtcctttcacttataaggtgctcaacctccatttttct 31385769  T
Q  485 atccgatgtgggacatataactcacactt 513  Q
    | |||||||  ||| | ||||||||||||    
T  31385768 aaccgatgtcagacttctaactcacactt 31385740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 411 - 523
Target Start/End: Original strand, 38796673 - 38796785
Alignment:
Q  411 actcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcaca 510  Q
    ||||||||| |||| ||||||||| |  |||||||||| |||| |||||||| |||||||||||  | | || |||| ||||||||||||||||||||||    
T  38796673 actcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcaca 38796772  T
Q  511 cttacacataaca 523  Q
    ||| |||| ||||    
T  38796773 cttgcacacaaca 38796785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 429 - 508
Target Start/End: Complemental strand, 29676622 - 29676543
Alignment:
Q  429 aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||  ||| || ||||| ||||| |||||||||||||    
T  29676622 aaggcaatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatccaatgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 515
Target Start/End: Complemental strand, 30312924 - 30312790
Alignment:
Q  382 agcaaccgcacaagt-gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac-t 479  Q
    ||||||||||||| | |||||||||   ||||| ||||| |||| ||||||| ||| |||||||||||  ||| | |||||||||||||||||||||| |    
T  30312924 agcaaccgcacaaattgagagagactacacacttttacccaaaaccttaaggaaataagtttatgggtcatctaagttataaagtgttcaacctccactt 30312825  T
Q  480 tttctatccgatgtgggacatataactcacacttac 515  Q
    |||||||  |||||||| |||||||| |||||||||    
T  30312824 tttctat-tgatgtggggcatataacacacacttac 30312790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 409 - 508
Target Start/End: Original strand, 37895112 - 37895211
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||||||||| ||||||| ||||| | |||| ||| || |||||| |  | ||||||||||||||||||||||||||||||    
T  37895112 acactcttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacatataactca 37895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 390 - 513
Target Start/End: Complemental strand, 40733643 - 40733520
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    |||||| ||||||||| | ||||||||||| ||||  ||||||   |  |||||||||| |||| |||||||| ||||||||| |  |||||| |||| |    
T  40733643 cacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttacttttttatctg 40733544  T
Q  490 atgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||    
T  40733543 atgtgggacatataactcacactt 40733520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 511
Target Start/End: Complemental strand, 29677040 - 29676908
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggtt-----ctctcacttataaagtgttcaacctccac 478  Q
    ||||| ||||| | |||||||| | |||||||||| ||||  |||||||||||| ||||||||||      ||||||| ||||| ||||| |||||  ||    
T  29677040 caaccccacaattaagagagacaccacactcttacttaaagccttaaggcaatgggtttatgggtcttctcctctcacctataaggtgttaaacctttac 29676941  T
Q  479 ttttctatccgatgtgggacatataactcacac 511  Q
    | || ||||||||||||||||||||||||||||    
T  29676940 tcttttatccgatgtgggacatataactcacac 29676908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 36178320 - 36178424
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||| ||||| ||||||| || | || |||||||| |||||| ||||  ||| || ||||||| |||||||||||||||||    
T  36178320 acactcttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataactca 36178419  T
Q  509 cactt 513  Q
    |||||    
T  36178420 cactt 36178424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 384 - 511
Target Start/End: Complemental strand, 33731780 - 33731653
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||  |||||||| | | ||||||||| |||| |||||||||||  |||||||| | |||| |||||||| ||| |||||||  ||| ||     
T  33731780 caaccgcataagcaagagagacaccatactcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttt 33731681  T
Q  484 tatccgatgtgggacatataactcacac 511  Q
    ||||||||||| || |||||||||||||    
T  33731680 tatccgatgtgagatatataactcacac 33731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 37632648 - 37632762
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| ||||| |  ||| |||||||||| |||| ||||||||| |||  |||||  ||| || |||||||||| ||||||||||||||    
T  37632648 acactcttacccaaaaccttaaagttatgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactca 37632747  T
Q  509 cacttacacataaca 523  Q
    ||||| |||| ||||    
T  37632748 cacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 513
Target Start/End: Complemental strand, 6713084 - 6712979
Alignment:
Q  409 acactcttacctaaaatc-ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactc 507  Q
    ||||||||||| |||| | |||| |||||  |||||||||| |||| |||||||| ||||||||| |  ||| || ||||||||||| ||||||||||||    
T  6713084 acactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactc 6712985  T
Q  508 acactt 513  Q
    ||||||    
T  6712984 acactt 6712979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 12529054 - 12529183
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||||   |||||||| ||||  ||||| ||||||  ||||||||||||||||||| || |||| |||||||  |||||||| ||  ||| ||     
T  12529054 caaccgcacaaacaagagagacactacgttcttatctaaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttactgttt 12529153  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||  ||||| |||||||||||||||||||    
T  12529154 tatttgatgtaggacatataactcacactt 12529183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 427 - 500
Target Start/End: Original strand, 28254181 - 28254254
Alignment:
Q  427 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacat 500  Q
    ||||||||| | ||||||| || |||| ||||||||||||||||||||  |||||||||||||||||| |||||    
T  28254181 ttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 439 - 523
Target Start/End: Original strand, 38796299 - 38796383
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||| ||| |||| |||||||| ||||||||| |  ||| || |||||||||||||||||||||||||||||| |||| ||||    
T  38796299 gtttataggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaaca 38796383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 518
Target Start/End: Complemental strand, 1769973 - 1769890
Alignment:
Q  435 atgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacaca 518  Q
    ||||||||||| || |||| |||||||| ||||||||| |  ||| || ||||||||||| |||||||||||||||||| ||||    
T  1769973 atgagtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcaca 1769890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 503
Target Start/End: Complemental strand, 23346368 - 23346250
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  ||||||||   ||||||||||| |||| |||||||| ||| |||||||||  |||| | |||||| ||||| |||||  |||||||    
T  23346368 caaccgcacaagcaagagagacatcacactcttaccgaaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaacctttacttttc 23346270  T
Q  484 tatccgatgtgggacatata 503  Q
    ||| ||||||| ||||||||    
T  23346269 tatacgatgtgagacatata 23346250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 513
Target Start/End: Complemental strand, 34481372 - 34481269
Alignment:
Q  410 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcac 509  Q
    |||||||||| |||| ||||| ||||| | ||||| | |||| ||| ||||||| | |||||||||||||||| ||||||| ||| || ||||||||||     
T  34481372 cactcttacccaaaaccttaaagcaataaatttatagattctatcatttataaaatattcaacctccacttttatatccgacgtgagaaatataactcat 34481273  T
Q  510 actt 513  Q
    ||||    
T  34481272 actt 34481269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 9231380 - 9231242
Alignment:
Q  385 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 484  Q
    ||||||| |||| |||||||  ||||||||||| | ||||  |||||||  || ||| |||| | |||| | ||||||  ||||||||||  ||||||||    
T  9231380 aaccgcataagttagagagatactacactcttaaccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaacctttacttttct 9231281  T
Q  485 atccgatgtgggacatataactcacacttacacataaca 523  Q
    ||| ||| || ||||||||||||| ||||||||| ||||    
T  9231280 atctgatatgagacatataactcatacttacacacaaca 9231242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 390 - 524
Target Start/End: Original strand, 18204416 - 18204550
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    ||||| |||||||||| | ||| | ||||||||||  ||||  |||||||||||||||| || ||| |||| || || |||| |||| |||||||| |||    
T  18204416 cacaaatgagagagacaccacatttttacctaaaacattaaaacaatgagtttatgggtcctttcatttattaaatgctcaatctccgcttttctaaccg 18204515  T
Q  490 atgtgggacatataactcacacttacacataacac 524  Q
    |  |||||| | |||||||||||| |||| |||||    
T  18204516 acttgggacttctaactcacacttgcacacaacac 18204550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 505
Target Start/End: Original strand, 40163470 - 40163520
Alignment:
Q  455 acttataaagtgttcaacctccacttttctatccgatgtgggacatataac 505  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  40163470 acttataaggtgttcaacctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 5367587 - 5367458
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||| |||||||  |||||||||| ||||||||||| |||| |||||||  ||| ||| |||| |  ||| |||||||| |||||||||||   || ||     
T  5367587 caactgcacaagcaagagagacgccacactcttacccaaaaccttaaggttatgtgttcatggatcatcttacttataaggtgttcaacctttgctcttt 5367488  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||| |||||||||||  ||||||||    
T  5367487 tatccgatctgggacatatatatcacactt 5367458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 16591015 - 16590881
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac-tttt 482  Q
    ||||| ||||||| ||||||||  || | |||||| ||||| |||||||||||| |||||||||| |||| ||||      ||||||||||  || ||||    
T  16591015 caaccccacaagtaagagagacattagattcttacttaaaaccttaaggcaatgtgtttatgggtcctcttactt------tgttcaacctttacttttt 16590922  T
Q  483 ctatccgatgtgggacatataactcacacttacacataaca 523  Q
     |||  ||||||||||||||||||||||||| |||| ||||    
T  16590921 ttatttgatgtgggacatataactcacacttgcacacaaca 16590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 485
Target Start/End: Complemental strand, 2323714 - 2323647
Alignment:
Q  417 acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    |||||||| ||||||||| || |||||||| | |||||||||||||||||| ||||||||| |||||||    
T  2323714 acctaaaaccttaaggcattg-gtttatggatcctctcacttataaagtgtccaacctccatttttcta 2323647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 523
Target Start/End: Original strand, 36785664 - 36785728
Alignment:
Q  459 ataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| |||||||||||  ||| || |||||||||||||||||||||||||||||| |||| ||||    
T  36785664 ataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 36785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 453
Target Start/End: Complemental strand, 6421863 - 6421794
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctct 453  Q
    ||||| ||||||| |||||||| | ||||||||||| |||| |||||||||||  |||||||||| ||||    
T  6421863 caaccacacaagttagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctct 6421794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 428 - 485
Target Start/End: Original strand, 13154451 - 13154508
Alignment:
Q  428 taaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    |||| |||||||||||| |||| | |  ||||||||||||||||||||||||||||||    
T  13154451 taagacaatgagtttattggttattttccttataaagtgttcaacctccacttttcta 13154508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 510
Target Start/End: Original strand, 37894755 - 37894844
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcaca 510  Q
    |||||||||||||||||  |||||| ||  ||| |||||||| || || | |||  |||||||||| | |||||||||||||||||||||    
T  37894755 aaaatcttaaggcaatggatttatgagtcttcttacttataaggtttttagcctttacttttctattcaatgtgggacatataactcaca 37894844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 3672833 - 3672773
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttat 444  Q
    ||||| ||||| | |||||||| | ||||||||||| ||||||||||||||||| ||||||    
T  3672833 caaccacacaattaagagagacaccacactcttacccaaaatcttaaggcaatgggtttat 3672773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 35580477 - 35580540
Alignment:
Q  397 gagagagacgctacactct--tacctaaaatcttaaggcaatgagtttatgggttctctcactt 458  Q
    ||||||||||| |||||||  |||| |||| ||||||||||||||||||||||| ||| |||||    
T  35580477 gagagagacgccacactctcttacccaaaaccttaaggcaatgagtttatgggtcctcacactt 35580540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 463
Target Start/End: Complemental strand, 3673200 - 3673121
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaa 463  Q
    ||||| ||| ||| ||||||||   ||||||||| | |||||||||| ||||||||||||||| | |||| |||||||||    
T  3673200 caaccacactagtaagagagacatcacactcttagccaaaatcttaaagcaatgagtttatggatcctcttacttataaa 3673121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 31259667 - 31259784
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatcc---gatgtgggacatataac 505  Q
    ||||||||||| |||| |||||||  ||  ||||||||||  ||| |||||||| ||||| |||||  ||| || |||||   |||||| ||||||||||    
T  31259667 acactcttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatgatgtgagacatataac 31259766  T
Q  506 tcacacttacacataaca 523  Q
    || |||||||||| ||||    
T  31259767 tcgcacttacacacaaca 31259784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 42515077 - 42515031
Alignment:
Q  455 acttataaagtgttcaacctccacttttctatccgatgtgggacata 501  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||    
T  42515077 acttataaggtgtttaacctttacttttctatccgatgtgggacata 42515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 7784716 - 7784619
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacaca 518  Q
    ||||| |||||||||||  |||||  ||| ||||| ||||||| ||||||||||||| || |||| | ||||||  || | ||||||| |||||||||    
T  7784716 aaaattttaaggcaatgtatttataagttatctcagttataaaatgttcaacctccatttatctaactgatgtgacacttctaactcatacttacaca 7784619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 523
Target Start/End: Original strand, 43443103 - 43443147
Alignment:
Q  479 ttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||| |||||||||||||||||| |||||| |||| ||||    
T  43443103 ttttctatctgatgtgggacatataacttacacttgcacacaaca 43443147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 377 - 524
Target Start/End: Original strand, 19283474 - 19283621
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| |||||||||||||||||||||||||| ||||||||| | |||| |||||||| ||||||||||| || |||||| ||| |||||| |||||||||    
T  19283474 gctagagcaaccgcacaagtgagagagacgccacactcttatccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaacctcc 19283573  T
Q  477 acttttctatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||||    
T  19283574 acttttctatccggtgtgggacatataactcacacttgcacacaacac 19283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 384 - 524
Target Start/End: Original strand, 22077521 - 22077661
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| ||||||||||||||| ||||||||||| |||| |||||||| | |||||||||||| |||| |||||||| |||||||||||  |||||||    
T  22077521 caaccgcataagtgagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttc 22077620  T
Q  484 tatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||| |||||||||||||||||| |||| |||||    
T  22077621 tatccgatgtgagacatataactcacacttgcacacaacac 22077661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 382 - 523
Target Start/End: Original strand, 1188612 - 1188753
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| || ||||||||||||||| ||||| ||||| |||| ||||| |||||||||||||| ||  ||||||||||||| | |||||||||||||||    
T  1188612 agcaaccacataagtgagagagacgccacacttttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaacctccacttt 1188711  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||| ||| ||||||||||||||||| |||| ||||    
T  1188712 tctatccgatatggaacatataactcacacttgcacacaaca 1188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 26661548 - 26661677
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||| ||||||||| | ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||     
T  26661548 caaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttt 26661647  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    || |||||||||||||||||||||||||||    
T  26661648 tacccgatgtgggacatataactcacactt 26661677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 5320005 - 5320120
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| ||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||| ||||||||| |  ||||||||||||||||||| |    
T  5320005 agagagacactacactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaa 5320104  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  5320105 catataactcacactt 5320120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 377 - 513
Target Start/End: Complemental strand, 17294717 - 17294580
Alignment:
Q  377 gctatagcaacc-gcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctc 475  Q
    |||| ||||||| ||| ||| ||||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| ||||||||||||||||||||     
T  17294717 gctagagcaacctgcataagcgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctt 17294618  T
Q  476 cacttttctatccgatgtgggacatataactcacactt 513  Q
     ||| || ||||||||||||||||||||||||||||||    
T  17294617 tactcttttatccgatgtgggacatataactcacactt 17294580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 66498 - 66637
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||||| ||||||||||||| ||||||||| |||| |||||||| ||  |||||||| | |||| |||||||| |||||||||||  |||||||    
T  66498 caaccgcacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttc 66597  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||| ||| ||||||||||||||||| |||| ||||    
T  66598 tatccgatatggaacatataactcacacttgcacacaaca 66637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 391 - 494
Target Start/End: Complemental strand, 10351285 - 10351182
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    ||||||||||||||||| ||||||||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  10351285 acaagtgagagagacgccacactcttacccaaaatcttaaagtaatgtgtttatgggttctctcacttataaagtgttcaacctctatttttctatctga 10351186  T
Q  491 tgtg 494  Q
    ||||    
T  10351185 tgtg 10351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 22793411 - 22793281
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaa-tgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||| ||||||| |||||||||  ||||||||||  |||| | |||||||| || |||||||| | |||||||||||||||| ||||||||| ||||||    
T  22793411 caaccacacaagtaagagagacgtcacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaagttttcaacctctactttt 22793312  T
Q  483 ctatccgatgtgggacatataactcacactt 513  Q
    |||| ||||||||||||||||||||||||||    
T  22793311 ctatacgatgtgggacatataactcacactt 22793281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 24600353 - 24600479
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 496  Q
    ||||||||| | ||||||||||  |||| |||||| ||||||||||||| ||||||| ||||||||  ||||||||||  ||||||||||||||| ||||    
T  24600353 gagagagacaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatggg 24600452  T
Q  497 acatataactcacacttacacataaca 523  Q
    ||||||||||||||||| |||| ||||    
T  24600453 acatataactcacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 37850619 - 37850765
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| |||||||||||||||||||||||| | ||||||||| |  ||| |||||  || |  ||||||||||||||| |||||||| ||||||||||||     
T  37850619 gctagagcaaccgcacaagtgagagagacaccacactcttatccgaaaccttaaaacattaggtttatgggttctcttacttataaggtgttcaacctct 37850718  T
Q  477 acttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||| || ||| |||||||||||||||||||||||||| |||| ||||    
T  37850719 actgttttatgcgatgtgggacatataactcacacttgcacacaaca 37850765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 393 - 518
Target Start/End: Original strand, 1187399 - 1187524
Alignment:
Q  393 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 492  Q
    ||||||||||||||  ||||| ||||  |||||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||| ||| |||||    
T  1187399 aagtgagagagacgtcacacttttactcaaaatcttaaggtaatgagtttatgggtcttctcacttataaaatgtttaacctccacttttatattcgatg 1187498  T
Q  493 tgggacatataactcacacttacaca 518  Q
    || ||||||||| |||||||| ||||    
T  1187499 tgagacatataattcacacttgcaca 1187524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 389 - 513
Target Start/End: Original strand, 32594747 - 32594871
Alignment:
Q  389 gcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatcc 488  Q
    |||||||| |||||||| | ||||||||||| |||| |||||| |||||||||||||||| |||| |||||||| |||||||||||  ||| || ||||     
T  32594747 gcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatct 32594846  T
Q  489 gatgtgggacatataactcacactt 513  Q
    ||||| |||||||||||||||||||    
T  32594847 gatgtaggacatataactcacactt 32594871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 41142505 - 41142365
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactctt-acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||| ||||||  |||||||||| |||||||| ||| |||| |||||||||||| |||||||||| || | |||||||| |||||||||||  ||| ||    
T  41142505 caaccacacaagcaagagagacgccacactctttaccaaaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgtt 41142406  T
Q  483 ctatccgatgtgggacatataactcacacttacacataaca 523  Q
     |||||||||||||||||||||||||||||| |||| ||||    
T  41142405 ttatccgatgtgggacatataactcacacttgcacagaaca 41142365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 44290850 - 44290980
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactctt-acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||||||||||  ||||| || | |||||||| ||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||    
T  44290850 caaccgcacaagcaagagatacaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactatt 44290949  T
Q  483 ctatccgatgtgggacatataactcacactt 513  Q
     ||||||||||||||||||||||||||||||    
T  44290950 ttatccgatgtgggacatataactcacactt 44290980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 382 - 523
Target Start/End: Complemental strand, 34365059 - 34364918
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||||| ||| ||| ||||||||| | ||||||||||| |||| |||||||| ||| |||||||||| |||| |||||||| |||||||||||  | | |    
T  34365059 agcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattat 34364960  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    | ||||||||||| |||||||||||||||||| |||| ||||    
T  34364959 tttatccgatgtgtgacatataactcacacttgcacacaaca 34364918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 384 - 516
Target Start/End: Original strand, 3537625 - 3537757
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||| ||||| |||||| ||| |||| ||| |||| |||||||||||  ||| ||     
T  3537625 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattt 3537724  T
Q  484 tatccgatgtgggacatataactcacacttaca 516  Q
    ||||||||||||||||||||||| |||| ||||    
T  3537725 tatccgatgtgggacatataactaacacgtaca 3537757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 384 - 524
Target Start/End: Original strand, 30630664 - 30630804
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| || |||||| || |||||  |||||||||| ||||  ||||||||||| ||||||||||||||| |||||||||||||  |||||  | ||||     
T  30630664 caaccacataagtgatagggacgccccactcttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttt 30630763  T
Q  484 tatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  30630764 tatccgatgtgagacatataaatcacacttgcacataacac 30630804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 3875357 - 3875496
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||| |||||||||||| | ||| |||||||||||| |||||||||||| ||||||| || |||| |||||||| |||| ||||||  ||||||     
T  3875357 caaccacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttt 3875456  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||| ||||||||||| || ||| |||| ||||    
T  3875457 tatccgatgtgtgacatataactgactcttgcacacaaca 3875496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 34649556 - 34649441
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    ||||||||||  |||||||||| |||| ||||||||| |  |||||||||||||  ||||||||| |||||||||||  ||| || ||||||||||||||    
T  34649556 agagagacgcctcactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatccgatgtggga 34649457  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  34649456 catataactcacactt 34649441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 523
Target Start/End: Complemental strand, 34364646 - 34364500
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| |||||||||| ||| |||||||||   ||||||||||| |||| |||||||| ||| ||||| || | |||| |||||||| |||||||||||      
T  34364646 gctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaaccttt 34364547  T
Q  477 acttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||| || ||||||||||| |||||||||||||||||| |||| ||||    
T  34364546 actattttatccgatgtgagacatataactcacacttgcacacaaca 34364500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 411 - 513
Target Start/End: Original strand, 44290511 - 44290613
Alignment:
Q  411 actcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcaca 510  Q
    ||||||||| |||| |||||||||||| |||||||||| |||| ||||||||  ||||||||||  ||| || |||||||||||||||||||||||||||    
T  44290511 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcaca 44290610  T
Q  511 ctt 513  Q
    |||    
T  44290611 ctt 44290613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 38804381 - 38804510
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| ||||||||||||| |||| |||||||  ||| |||||||| | |||| |||||||| |||||||||||  ||| ||     
T  38804381 caaccgcacaagcaagagagacactacactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttt 38804480  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||| ||||||||||| ||||||||||||||    
T  38804481 tattcgatgtgggacgtataactcacactt 38804510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 426 - 523
Target Start/End: Original strand, 41184493 - 41184590
Alignment:
Q  426 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||  ||| || ||||||||||| |||||||||||||||||| |||| ||||    
T  41184493 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaaca 41184590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 48588514 - 48588643
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||| |||||||| |  |||||||||| |||| ||||||||||||| |||| ||||  ||| |||||||| |||||||||||  ||| ||     
T  48588514 caaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattt 48588613  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||||| ||||||| |||||||||||    
T  48588614 tatccgatgtcggacatagaactcacactt 48588643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 377 - 523
Target Start/End: Complemental strand, 9956048 - 9955900
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagttta-tgggttctctcacttataaagtgttcaacctc 475  Q
    |||| ||||||||||||||  ||||||||   ||||||||||| |||| |||||||||||  ||||| ||||| |||| |||||||| |||||||||||     
T  9956048 gctagagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctt 9955949  T
Q  476 cacttttct-atccgatgtgggacatataactcacacttacacataaca 523  Q
     |||||| | ||| |||||||||||||||||||||||| ||||| ||||    
T  9955948 tactttttttatctgatgtgggacatataactcacactaacacacaaca 9955900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 3550838 - 3550723
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| ||||  ||||||||||| ||||||| || |||| |||||||| |||||||||||  ||| || |||| |||||||||    
T  3550838 agagagacaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtggga 3550739  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  3550738 catataactcacactt 3550723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 39066226 - 39066365
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| || |||| |||||||| | ||||||||| | |||| |||||| |||||| |||||||||  ||| | |||||| |||||||||||  |||||||    
T  39066226 caaccacataagtaagagagacaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttc 39066325  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||| | ||||||||||||||| |||| ||||    
T  39066326 tatccgatgtggaatatataactcacacttgcacacaaca 39066365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 400 - 523
Target Start/End: Complemental strand, 41157107 - 41156984
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 499  Q
    |||||| | ||||||||||| |||| ||||| ||||||||||||||||| |||| |||||||| |||||||||||  ||| || |||||| | |||||||    
T  41157107 agagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgttatgggaca 41157008  T
Q  500 tataactcacacttacacataaca 523  Q
    ||||| |||||||| |||| ||||    
T  41157007 tataattcacacttgcacacaaca 41156984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 26661924 - 26662053
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||  ||||||||||  |||||||||||| |||||||||||  ||| ||     
T  26661924 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttt 26662023  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| ||| ||||| |||||||||||||||    
T  26662024 tatctgatatgggatatataactcacactt 26662053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 393 - 513
Target Start/End: Original strand, 47379813 - 47379940
Alignment:
Q  393 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaa-------gtgttcaacctccacttttcta 485  Q
    ||||||||||||||| ||||||||| | ||||| |||||| |||||| || |||||| | | |||||| ||       ||||||||||||||||||||||    
T  47379813 aagtgagagagacgccacactcttatccaaaattttaaggtaatgagcttgtgggttatttaacttattaaatattaagtgttcaacctccacttttcta 47379912  T
Q  486 tccgatgtgggacatataactcacactt 513  Q
    |||||||||||| |||||||||||||||    
T  47379913 tccgatgtgggatatataactcacactt 47379940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 384 - 524
Target Start/End: Complemental strand, 24448409 - 24448269
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| || |||||||||| |||| ||||| ||| | ||||||||||| ||||||||||||| |  |||||||||||||| |||||||| ||||||||||    
T  24448409 caacctcataagtgagagacacgccacacttttatccaaaatcttaagacaatgagtttatgagccctctcacttataaaatgttcaacttccacttttc 24448310  T
Q  484 tatccgatgtgggacatataactcacacttacacataacac 524  Q
    | |  |||||   |||||||||| |||||| |||| |||||    
T  24448309 tttgagatgtctaacatataacttacacttgcacacaacac 24448269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 491
Target Start/End: Original strand, 22077136 - 22077243
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| ||||||| ||||||  ||||||||| | |||| |||| |||||||||||||||||| |||| |||||||| || ||||||||  |||||||    
T  22077136 caaccgcataagtgagggagacgtcacactcttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttc 22077235  T
Q  484 tatccgat 491  Q
    ||||||||    
T  22077236 tatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 41157507 - 41157368
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||| |||| | ||||||||||  |||| || ||||||||| |||||||||| |||| |||||||| ||||||||| |  ||| ||     
T  41157507 caaccacacaagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttt 41157408  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| ||||||||||||||||||||||||| |||| ||||    
T  41157407 tatctgatgtgggacatataactcacacttgcacacaaca 41157368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 518
Target Start/End: Original strand, 22077855 - 22077988
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||||| |||||||| |||||||||||  ||| |||| ||| |||||||||||||| |||| ||||||||  ||||||||||  | |||||    
T  22077855 caaccgcataagtgaaagagacgccacactcttaccccaaacctta-ggctatgagtttatgggtcctcttacttataagatgttcaacctttatttttc 22077953  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    |||||||| |   ||||||||||||||||| ||||    
T  22077954 tatccgatttaaaacatataactcacacttgcaca 22077988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 37556243 - 37556114
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccact-ttt 482  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||| ||| |||||||| | |||| ||||||||  ||||||||||  ||| |||    
T  37556243 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgg-tcctcttacttataagatgttcaacctttactattt 37556145  T
Q  483 ctatccgatgtgggacatataactcacactt 513  Q
     ||||||||||||||||||||||||||||||    
T  37556144 ttatccgatgtgggacatataactcacactt 37556114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 427 - 524
Target Start/End: Complemental strand, 44685546 - 44685448
Alignment:
Q  427 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaa-cctccacttttctatccgatgtgggacatataactcacacttacacataacac 524  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||| |||  ||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  44685546 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 44685448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 513
Target Start/End: Complemental strand, 40082534 - 40082410
Alignment:
Q  388 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 487  Q
    ||||||||  |||||||  | ||||||||||| |||| ||||||||||||| ||||||  | |||| |||||||| |||||||||||  ||| || ||||    
T  40082534 cgcacaagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatc 40082436  T
Q  488 cgatgtgggacatataactcacactt 513  Q
    |||||| |||||||||||||||||||    
T  40082435 cgatgtaggacatataactcacactt 40082410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 384 - 508
Target Start/End: Complemental strand, 14318999 - 14318875
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||| | |||||||| | ||||||||||| |||| |||||||||||   |||||||||  ||| |||||||| |||||||||||  ||| ||     
T  14318999 caaccgcacaaataagagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattt 14318900  T
Q  484 tatccgatgtgggacatataactca 508  Q
    ||||||| |||| ||||||||||||    
T  14318899 tatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 426 - 510
Target Start/End: Original strand, 24132053 - 24132137
Alignment:
Q  426 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcaca 510  Q
    ||||||||||||||||||||| | | || | |||||| |||||||||||  |||||||||||||||| |||||||||||||||||    
T  24132053 cttaaggcaatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatgagggacatataactcaca 24132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 398 - 514
Target Start/End: Original strand, 50052063 - 50052179
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| ||||  |||||  |||  |||||||||| |||| ||||||||  ||||||||||  ||| || ||||||||||||||    
T  50052063 agagagacaccacactcttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtggga 50052162  T
Q  498 catataactcacactta 514  Q
    |||||||||||||||||    
T  50052163 catataactcacactta 50052179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 524
Target Start/End: Original strand, 66128 - 66255
Alignment:
Q  399 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttc-aacctccacttttctatccgatgtggga 497  Q
    ||||| ||| ||||||||||| |||| |||||||| ||  |||||||||| |||| |||||||| |||||| |||||  |||||||||||||||||| ||    
T  66128 gagaggcgccacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgaga 66227  T
Q  498 cat-ataactcacacttacacataacac 524  Q
    ||| || |||||||||| |||| |||||    
T  66228 catgattactcacacttgcacacaacac 66255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 29798317 - 29798202
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||| | || | |||||||||||| ||||||| || |||| |||||||| |||||||||||  ||| || ||||| |||| |||    
T  29798317 agagagacaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtagga 29798218  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  29798217 catataactcacactt 29798202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 31767187 - 31767326
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||| |||||  ||||||||||| |||| ||||||||| |  ||| |||||| |||| |||||||| |||||||||||  ||| ||     
T  31767187 caaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttt 31767286  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||| ||||||||| ||||||| |||| ||||    
T  31767287 tatccgatgtggaacatataacccacacttgcacacaaca 31767326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 41759601 - 41759486
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| ||||||||||||  ||||||| |  ||| |||||||| ||||||||| |  ||| || ||||||||||| ||    
T  41759601 agagagacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtga 41759502  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  41759501 catataactcacactt 41759486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 439 - 513
Target Start/End: Original strand, 3537228 - 3537302
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||||||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 3537302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 510
Target Start/End: Complemental strand, 5575223 - 5575110
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 496  Q
    ||||||||||| ||||||||| | |||| ||||| || |||  ||||| ||| |||| |||||||| |||||||||||  ||| |||||||||| |||||    
T  5575223 gagagagacgccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggtgttcaacctttactcttctatccgacgtggg 5575124  T
Q  497 acatataactcaca 510  Q
    |||||||| |||||    
T  5575123 acatataattcaca 5575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 513
Target Start/End: Complemental strand, 11977387 - 11977283
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| ||||||||| |  ||||||| || |||| |||||||| ||||||||| |  ||| || || ||||||||||||||||||||||    
T  11977387 acactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatataactca 11977288  T
Q  509 cactt 513  Q
    |||||    
T  11977287 cactt 11977283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 391 - 501
Target Start/End: Complemental strand, 44092019 - 44091909
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    |||||||||| |||||| ||||||||||| | ||||||||   | |   |||||||||||||||||||||||||||||||||||  ||||||  ||| ||    
T  44092019 acaagtgagaaagacgccacactcttacccacaatcttaaaatattagatttatgggttctctcacttataaagtgttcaacctttacttttacatctga 44091920  T
Q  491 tgtgggacata 501  Q
    |||| ||||||    
T  44091919 tgtgtgacata 44091909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 528
Target Start/End: Complemental strand, 45084457 - 45084368
Alignment:
Q  441 ttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt--acacataacacaaca 528  Q
    |||||||| |||| |||||||| |||||||||||  ||| || |||||||||||||| |||||||||||||||  |||||| ||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacacatgacacaaca 45084368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 37555861 - 37555733
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||| | |  |||| || | |||| |||||||| || |||||||| |||| ||     
T  37555861 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctaaggatttaagg-tcctcttacttataatgtattcaaccttcactattt 37555763  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||| ||||||||||||||    
T  37555762 tatccgatgtgggacttataactcacactt 37555733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 523
Target Start/End: Complemental strand, 4878872 - 4878796
Alignment:
Q  447 gttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||||||||| ||||||| || |||| || |||||||||||| |||||||||||||| || |||| ||||    
T  4878872 gttctctcacttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaaca 4878796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 485
Target Start/End: Complemental strand, 12772971 - 12772903
Alignment:
Q  417 acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    |||||||| |||||| |||||| ||||||| ||||||||||||||||| |||||||||| | |||||||    
T  12772971 acctaaaaccttaagacaatgaatttatggattctctcacttataaagcgttcaacctcaagttttcta 12772903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 44043812 - 44043886
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaac 472  Q
    |||||||| | ||||||||||| ||||||||||| ||||| ||||||||||  ||| |||||||| |||||||||    
T  44043812 agagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaac 44043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 439 - 513
Target Start/End: Complemental strand, 50556528 - 50556454
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    ||||| || |||||||||||||||| |||||||||||| |||||||||  |||||| || ||||||| |||||||    
T  50556528 gtttacggattctctcacttataaattgttcaacctccgcttttctatatgatgtgtgatatataacccacactt 50556454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 524
Target Start/End: Original strand, 22077243 - 22077288
Alignment:
Q  479 ttttctatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||    
T  22077243 ttttctatccgatgtgggacatataactcacacttgcacacaacac 22077288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 32168724 - 32168793
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctct 453  Q
    ||||||||||||  |||||||||| ||||||||||| |||| || ||||||||| |||||||||| ||||    
T  32168724 caaccgcacaagcaagagagacgccacactcttacccaaaacctcaaggcaatgggtttatgggtcctct 32168793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 506
Target Start/End: Original strand, 5528794 - 5528902
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| ||||  ||||| |||| ||||||  |||||||||||| || |||| | ||||||  ||||||||||  ||| || ||||||||||| ||    
T  5528794 agagagacgccacacatttacccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgaga 5528893  T
Q  498 catataact 506  Q
    |||||||||    
T  5528894 catataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 523
Target Start/End: Original strand, 21378122 - 21378206
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||| |||| ||||||||  | ||||||||  ||| ||||||||||| |||||||||||||| |||||| |||| ||||    
T  21378122 gtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaaca 21378206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 457 - 524
Target Start/End: Original strand, 50469180 - 50469247
Alignment:
Q  457 ttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||||||||||  |||||  |||| ||||| ||||||||||||||||||| |||| |||||    
T  50469180 ttataaagtgttcaacctttactttattatctgatgtaggacatataactcacacttgcacacaacac 50469247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 5996891 - 5997036
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| ||||||| ||||| |||||||||| | ||||||| ||  |||| |||||  |||||  | ||||| | |||||| ||||||| ||||||| | ||    
T  5996891 gctagagcaaccacacaaatgagagagacaccacactctcactcaaaaccttaaa-caatggatatatggatcctctcatttataaaatgttcaagcacc 5996989  T
Q  477 acttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||| |  |||||||||||||||| ||| ||| |||| ||||    
T  5996990 acttttctaacttatgtgggacatataacccacgcttgcacacaaca 5997036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 489
Target Start/End: Complemental strand, 4956298 - 4956218
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    ||||| ||||||||||  |||  ||||||||||||||| | |||| ||||||||  ||||||||||  |||||||||||||    
T  4956298 acacttttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttcaacctttacttttctatccg 4956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 30576615 - 30576707
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||||||||||||||  |||| | ||||| ||||  ||||| || |  || ||||||| |||||||| ||||||||||||||||| ||||||    
T  30576615 cacaagtgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 30576707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 47380191 - 47380254
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatg 445  Q
    |||||||  |||||||||||||| |  ||||||||||| ||||  |||||||||||||||||||    
T  47380191 agcaaccagacaagtgagagagatgtcacactcttacccaaaactttaaggcaatgagtttatg 47380254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 513
Target Start/End: Complemental strand, 45839664 - 45839630
Alignment:
Q  479 ttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||||||||||||||||||||||||| ||||    
T  45839664 ttttctatccgatgtgggacatataactcatactt 45839630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 470
Target Start/End: Complemental strand, 48000129 - 48000099
Alignment:
Q  440 tttatgggttctctcacttataaagtgttca 470  Q
    |||||||||||||||||||||||||||||||    
T  48000129 tttatgggttctctcacttataaagtgttca 48000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 35530414 - 35530479
Alignment:
Q  458 tataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||| ||||||||||  | |||| ||| ||| |||||||||||||| |||| ||||||||||||    
T  35530414 tataaaatgttcaaccttaatttttttattcgacgtgggacatataacacacatttacacataaca 35530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 513
Target Start/End: Original strand, 50051777 - 50051806
Alignment:
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  50051777 tatccgatgtgggacatataactcacactt 50051806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 3e-43; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 382 - 523
Target Start/End: Complemental strand, 6071266 - 6071125
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||||||  ||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  6071266 agcaaccatacaagcgagagagacgccacactcttatccaaaatcttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctccacttt 6071167  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||| | |||||||||||||||||||||||| |||| ||||    
T  6071166 tctattcaatgtgggacatataactcacacttgcacacaaca 6071125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 382 - 524
Target Start/End: Original strand, 12092506 - 12092648
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| |||||||||||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  12092506 agcaacctcacaagtgagagagacaccacagtcttactcaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctccacttt 12092605  T
Q  482 tctatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||||||||||| |||| ||| ||| |||| |||||    
T  12092606 tctatccgatgtgggacatctaacacacccttgcacacaacac 12092648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 384 - 524
Target Start/End: Original strand, 10074389 - 10074529
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||| |||||||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  |||||||    
T  10074389 caaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttc 10074488  T
Q  484 tatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||||||| | |||||||||||| |||| |||||    
T  10074489 tatccgatgtgggacctctaactcacacttgcacacaacac 10074529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 3409391 - 3409262
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  ||| ||     
T  3409391 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattt 3409292  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||||||||||||||||    
T  3409291 tatctgatgtgggacatataactcacactt 3409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 398 - 523
Target Start/End: Complemental strand, 8482044 - 8481920
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||| |||| ||||| |||    
T  8482044 agagagacaccacactcttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgt-gga 8481946  T
Q  498 catataactcacacttacacataaca 523  Q
    |||||||||||||||| |||| ||||    
T  8481945 catataactcacacttgcacacaaca 8481920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 375 - 524
Target Start/End: Original strand, 10073633 - 10073780
Alignment:
Q  375 atgctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 474  Q
    |||||| | ||||| ||| |||||||||||| | ||||||||||| ||||||||||| |||||||||||||| | |||| |||||||| |||||||||||    
T  10073633 atgctagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacct 10073732  T
Q  475 ccacttttctatccgatgtgggacatataactcacacttacacataacac 524  Q
      |||||||  ||||||||||||||||||||| |||||| |||| |||||    
T  10073733 ttacttttc--tccgatgtgggacatataactaacacttgcacacaacac 10073780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 29518635 - 29518506
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  29518635 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 29518536  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  29518535 tatccgatgtgggacatataactcacactt 29518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 29519052 - 29518923
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  29519052 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 29518953  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  29518952 tatccgatgtgggacatataactcacactt 29518923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 32741311 - 32741182
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  32741311 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 32741212  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  32741211 tatccgatgtgggacatataactcacactt 32741182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 513
Target Start/End: Complemental strand, 16107817 - 16107681
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| ||||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| ||||||| || |||| |||||||| ||||| |||||      
T  16107817 gctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaaccttt 16107718  T
Q  477 acttttctatccgatgtgggacatataactcacactt 513  Q
    |||||| |||||||||||  |||||||||||||||||    
T  16107717 acttttttatccgatgtgacacatataactcacactt 16107681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 2378244 - 2378129
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||| |||||||||||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||||||    
T  2378244 agagagacaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggga 2378145  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  2378144 catataactcacactt 2378129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 2579898 - 2580037
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||| ||||||| |||| ||||||||  || |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  2579898 caaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttt 2579997  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  2579998 tatccgatgtgggacatataactcacacttgcacacaaca 2580037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 397 - 524
Target Start/End: Original strand, 10074030 - 10074157
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 496  Q
    ||||||||| | ||||| ||||| |||| |||||||||||| |||||||||| |||| |||||||| ||||||||| |  ||||||||||||||||||||    
T  10074030 gagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtggg 10074129  T
Q  497 acatataactcacacttacacataacac 524  Q
    | ||||||||||| ||| |||| |||||    
T  10074130 atatataactcacccttgcacacaacac 10074157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 2578469 - 2578597
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  | |||||| | ||||||||||| |||| |||||||| ||| |||||||||| |||| ||||||||||||||||||||  ||| ||     
T  2578469 caaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttt 2578568  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||| |||||||||||||||||||||||    
T  2578569 tatccg-tgtgggacatataactcacactt 2578597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 16454707 - 16454578
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||||||| | ||||||||||||||||| |||||||||| |||| |||||||| ||||||||| |  | | ||     
T  16454707 caaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttt 16454608  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| ||||||||||| |||||||||||||    
T  16454607 tatctgatgtgggacacataactcacactt 16454578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 409 - 513
Target Start/End: Complemental strand, 2377861 - 2377757
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || || ||||||||||||||||||||||    
T  2377861 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactca 2377762  T
Q  509 cactt 513  Q
    |||||    
T  2377761 cactt 2377757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 384 - 512
Target Start/End: Complemental strand, 3415590 - 3415462
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||  |||||||||||  ||| ||     
T  3415590 caaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattt 3415491  T
Q  484 tatccgatgtgggacatataactcacact 512  Q
    |||  ||||||||||||||||||||||||    
T  3415490 tatgtgatgtgggacatataactcacact 3415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 14748389 - 14748493
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| ||||| ||||||||||||||||| |||| | |||||| |||||||||||  ||| || |||||||||||||||||||||||||    
T  14748389 acactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataactca 14748488  T
Q  509 cactt 513  Q
    |||||    
T  14748489 cactt 14748493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 377 - 513
Target Start/End: Complemental strand, 35210343 - 35210207
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| ||||||||||||||  | ||| || | ||||||||||| |||| ||||||||||||  ||||||||| |||| |||||||| |||||||||||      
T  35210343 gctagagcaaccgcacaagcaaaagaaacaccacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaaccttt 35210244  T
Q  477 acttttctatccgatgtgggacatataactcacactt 513  Q
    ||| || ||||||||||| ||||||||||||||||||    
T  35210243 actattttatccgatgtgagacatataactcacactt 35210207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 12085060 - 12085198
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||||||||||||||| ||||||||||| |||| |||||||| |||  |||||| || || ||  ||||||||||||||| |||||| ||||    
T  12085060 caaccacacaagtgagagagacgccacactcttacccaaaaccttaaggccatggttttatgagtcctttctattataaagtgttcaaactccac-tttc 12085158  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| ||||  ||||||||||||||||||| |||| ||||    
T  12085159 tatctgatgcaggacatataactcacacttgcacaaaaca 12085198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 518
Target Start/End: Original strand, 12071717 - 12071851
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||||||||||||||| ||||||||||| |||| |||||||  ||  ||||||| || || ||  ||||||||||||||| ||||| |||||    
T  12071717 caaccacacaagtgagagagacgccacactcttacccaaaaccttaaggtcataggtttatgagtcctttctattataaagtgttcaaactccatttttc 12071816  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    |||| |||| | |||||||||||||||||| ||||    
T  12071817 tatctgatgcgagacatataactcacacttgcaca 12071851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 510
Target Start/End: Complemental strand, 16455039 - 16454913
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||||||||  |||||||||| || | |||||||| |||||||||||  ||| ||     
T  16455039 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttt 16454940  T
Q  484 tatccgatgtgggacatataactcaca 510  Q
    |||| ||||||||||| ||||||||||    
T  16454939 tatctgatgtgggacacataactcaca 16454913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 382 - 510
Target Start/End: Complemental strand, 1127494 - 1127366
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| || |||| |||||||||| ||||||||||| |||| ||||||| |||| ||||||| || |||| |||||||| |||||||||||  ||| |    
T  1127494 agcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactat 1127395  T
Q  482 tctatccgatgtgggacatataactcaca 510  Q
    | || ||||||||||| ||||||||||||    
T  1127394 tttacccgatgtgggatatataactcaca 1127366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 514
Target Start/End: Original strand, 6999836 - 6999952
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| ||||||||| | |||| ||||||||| ||||||||||| | |||| || ||||| ||||||||| |  |||||| |||||||||| |||    
T  6999836 agagagacgccacactcttatccaaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatccgatgtagga 6999935  T
Q  498 catataactcacactta 514  Q
    |||||||||||||||||    
T  6999936 catataactcacactta 6999952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 3058344 - 3058229
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| |||||||||||| |||||||| | |||  |||||||| |||||||||||  ||| || ||||||||||||||    
T  3058344 agagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtggga 3058245  T
Q  498 catataactcacactt 513  Q
    ||||||||| ||||||    
T  3058244 catataactaacactt 3058229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 32460614 - 32460733
Alignment:
Q  392 caagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgat 491  Q
    ||||||||| ||| |  ||||||||||| |||| |||||||||||| ||||||| || |||| |||||||| |||||||||||  ||| || ||| ||||    
T  32460614 caagtgagaaagatgtcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgat 32460713  T
Q  492 gtgggacatataactcacac 511  Q
    ||||||||||||||||||||    
T  32460714 gtgggacatataactcacac 32460733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 514
Target Start/End: Original strand, 1950211 - 1950341
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||| |||||||||  ||||||||||  |||| ||||||||| |   ||||||| | |||| |||| ||| |||||||||||  ||| ||     
T  1950211 caaccgcacaagtaagagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaacctttactcttt 1950310  T
Q  484 tatccgatgtgggacatataactcacactta 514  Q
    |||||||||||||||||||||||||||||||    
T  1950311 tatccgatgtgggacatataactcacactta 1950341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 388 - 513
Target Start/End: Complemental strand, 26544177 - 26544052
Alignment:
Q  388 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 487  Q
    ||||||||  ||||||||   ||||||||||  |||| ||||||||  || |||||||||| |||| |||||||| |||||||||||  ||| || ||||    
T  26544177 cgcacaagcaagagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatc 26544078  T
Q  488 cgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||    
T  26544077 cgatgtgggacatataactcacactt 26544052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 404 - 521
Target Start/End: Complemental strand, 31714781 - 31714666
Alignment:
Q  404 acgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatata 503  Q
    |||| ||||||||||  |||| |||||||||||||||| |||||| |||||| ||||| |  |||||||||||||||||||||||||||| ||||||||     
T  31714781 acgccacactcttactcaaaaccttaaggcaatgagttaatgggtcctctca-ttatataacgttcaacctccacttttctatccgatgtaggacatat- 31714684  T
Q  504 actcacacttacacataa 521  Q
    | |||||||| |||||||    
T  31714683 agtcacacttgcacataa 31714666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 1846880 - 1846751
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  | |||||| | ||||||||| | |||| ||||||||||||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  1846880 caaccgcacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattt 1846781  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||| |||||| || ||||||||    
T  1846780 tatccgatgtgagacatagaattcacactt 1846751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 3409792 - 3409663
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| ||||  | ||||||||| |||||||||| |||| ||||||||  |||||||| |  ||| ||     
T  3409792 caaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattt 3409693  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| ||||||| |||||||||||||||||    
T  3409692 tatctgatgtggtacatataactcacactt 3409663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 33605719 - 33605647
Alignment:
Q  451 tctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||| |||| ||||    
T  33605719 tctcaattataaagtgttcaacctccacttttctatctgatgtgagacatatagctcacacttgcacacaaca 33605647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 511
Target Start/End: Original strand, 2579518 - 2579645
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | | ||| ||||| |||| ||||||||||||||||||||||  |||| |||||||| || | | ||||  ||||||     
T  2579518 caaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttt 2579617  T
Q  484 tatccgatgtgggacatataactcacac 511  Q
    | ||||||||||||||||||||||||||    
T  2579618 tgtccgatgtgggacatataactcacac 2579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 510
Target Start/End: Original strand, 9062383 - 9062501
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    |||||| |||||||  | ||||| ||||| |||| |||||| ||||||||||||| || |||| ||||||||  ||||||||||  ||| || |||||||    
T  9062383 acaagtaagagagataccacacttttacccaaaa-cttaagacaatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccga 9062481  T
Q  491 tgtgggacatataactcaca 510  Q
    ||||||||||||||||||||    
T  9062482 tgtgggacatataactcaca 9062501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 5832053 - 5832181
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||| |||||||| | ||||| ||||| ||||||||||||   ||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  5832053 caaccacacaagtaagagagacaccacacttttacccaaaatcttaagggg-tggctttatgggtcctcttacttataaggtgttcaacctttactcttt 5832151  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||| ||||||||||||||||| ||||||    
T  5832152 tatccaatgtgggacatataacttacactt 5832181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 457 - 506
Target Start/End: Complemental strand, 33606034 - 33605985
Alignment:
Q  457 ttataaagtgttcaacctccacttttctatccgatgtgggacatataact 506  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33606034 ttataaagtgttcaacctccacttttctattcgatgtgggacatataact 33605985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 593760 - 593864
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||| ||||| |||| ||||||||| |  ||||||| || |||| |||||||| |||||||||||  ||| || |||||||||||||||||| ||||||    
T  593760 acactattacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactca 593859  T
Q  509 cactt 513  Q
    |||||    
T  593860 cactt 593864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 427 - 513
Target Start/End: Complemental strand, 10911655 - 10911568
Alignment:
Q  427 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac-ttttctatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||| || |||| |||||||| |||||||||||  || |||| |||| ||||| |||||||||||||||||||    
T  10911655 ttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatataactcacactt 10911568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 426 - 513
Target Start/End: Complemental strand, 16108153 - 16108066
Alignment:
Q  426 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||||||| |||||||||| |||| |||||||| ||||||||| |  ||| || |||| ||||||| |||||||||||||||||    
T  16108153 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacactt 16108066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 409 - 510
Target Start/End: Complemental strand, 2843662 - 2843560
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttat-gggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactc 507  Q
    ||||||||||| |||| ||||||||||||||||||| |||| |||| |||||||| ||||||||| |  | | || |||||||||||  |||||||||||    
T  2843662 acactcttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatataactc 2843563  T
Q  508 aca 510  Q
    |||    
T  2843562 aca 2843560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 513
Target Start/End: Original strand, 2578877 - 2578989
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 499  Q
    |||||| | ||||||||||| |||| ||||||| ||||||||||||| | |||| | |||||| || |||||| |  |||||| ||||||||| ||||||    
T  2578877 agagacaccacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttactttt-tatccgatgagggaca 2578975  T
Q  500 tataactcacactt 513  Q
    ||||| ||||||||    
T  2578976 tataaatcacactt 2578989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 510
Target Start/End: Original strand, 5958672 - 5958755
Alignment:
Q  427 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcaca 510  Q
    ||||| ||||||||||||| ||||||| | |||||| |||||||||||  ||| || ||||||||||   ||||||||||||||    
T  5958672 ttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgtaacacatataactcaca 5958755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 485
Target Start/End: Original strand, 34661693 - 34661736
Alignment:
Q  442 tatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  34661693 tatgggttctcttacttataaagtgatcaacctccacttttcta 34661736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 483
Target Start/End: Original strand, 5034899 - 5034946
Alignment:
Q  436 tgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||| ||||||  |||||||||||||||| ||||||||||||||||    
T  5034899 tgagttgatgggtcatctcacttataaagtggtcaacctccacttttc 5034946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 513
Target Start/End: Original strand, 2579203 - 2579260
Alignment:
Q  456 cttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    ||||||| ||||||||| |  ||| || ||||||||||||||||||||||| ||||||    
T  2579203 cttataaggtgttcaacttttactcttttatccgatgtgggacatataactaacactt 2579260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 5e-42; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 399 - 526
Target Start/End: Original strand, 4154707 - 4154834
Alignment:
Q  399 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 498  Q
    ||||||||| ||||||||||| |||| |||  |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  4154707 gagagacgccacactcttacccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggac 4154806  T
Q  499 atataactcacacttacacataacacaa 526  Q
    ||||||||||||||| |||| |||||||    
T  4154807 atataactcacacttgcacacaacacaa 4154834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 382 - 523
Target Start/End: Original strand, 4154305 - 4154445
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||||||  |||| ||||||||||   |||| |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4154305 agcaaccaaacaattgagagagacatcacacacttacccaaaatattaaggcaatgagtttatgggt-ctctcacttataaagtgttcaacctccacttt 4154403  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||| ||||| |||||||||||||||| || |||| ||||    
T  4154404 tctatctgatgtaggacatataactcacatttgcacacaaca 4154445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 382 - 523
Target Start/End: Original strand, 9620702 - 9620841
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||||||||||||||||   | |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||    
T  9620702 agcaaccacacaagtgagagagacatcaaactctta--taaaatcttaaggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttt 9620799  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||| | |||| |||||||||||||||||| |||| ||||    
T  9620800 tctatctgttgtgagacatataactcacacttgcacacaaca 9620841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 519
Target Start/End: Original strand, 45121952 - 45122071
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 499  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||| || |||| ||||||||||||||||||||  ||| || ||| ||||||||||||    
T  45121952 agagacgccacactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggaca 45122051  T
Q  500 tataactcacacttacacat 519  Q
    |||||||||||||| |||||    
T  45122052 tataactcacacttgcacat 45122071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 384 - 518
Target Start/End: Original strand, 45122083 - 45122217
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||| |||||||| | ||||||||||| |||| ||||||  |||||||||||||||||||| |||||||| |||||||||||  ||| ||     
T  45122083 caaccccacaagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattt 45122182  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    ||||||||||| |||||||||||||||||| ||||    
T  45122183 tatccgatgtgagacatataactcacacttgcaca 45122217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 3038316 - 3038445
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||||||| || ||||||||||| |||| |||||||||||| |||||||||| || | ||||||||||||||||||||  ||| ||     
T  3038316 caaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattt 3038415  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  3038416 tatccgatgtgggacatataactcacactt 3038445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 3669819 - 3669690
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||||||||||| || |||| |||||||| |||||||||||  ||| ||     
T  3669819 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattt 3669720  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||||||||||||||||    
T  3669719 tatctgatgtgggacatataactcacactt 3669690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 373 - 517
Target Start/End: Complemental strand, 147594 - 147450
Alignment:
Q  373 caatgctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaac 472  Q
    |||||||| | | ||||||||||  |||||||||| ||||||||||| ||||  ||||||||||  |||||||||| |||| | |||||| |||||||||    
T  147594 caatgctagaactaccgcacaagcaagagagacgccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaac 147495  T
Q  473 ctccacttttctatccgatgtgggacatataactcacacttacac 517  Q
    ||  ||| || ||||||||||||||||||||||||||||||||||    
T  147494 ctttactcttttatccgatgtgggacatataactcacacttacac 147450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 398 - 523
Target Start/End: Complemental strand, 9608863 - 9608738
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| |||||| |||| |||| |||||||  ||| ||||||||||  ||| |||||||| |||||||||||  ||||||||||||||| |||||    
T  9608863 agagagacgccacactcatacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatggga 9608764  T
Q  498 catataactcacacttacacataaca 523  Q
    |||||||||||||||| |||| ||||    
T  9608763 catataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 431 - 523
Target Start/End: Complemental strand, 41972243 - 41972151
Alignment:
Q  431 ggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||| |||||||||| || |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  41972243 ggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 396 - 523
Target Start/End: Complemental strand, 9309475 - 9309348
Alignment:
Q  396 tgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgg 495  Q
    |||||||||| | |||||||||||  | | |||||||||||||||||| |||| |||| |||||||| ||||||||| |  ||| || ||||||||||||    
T  9309475 tgagagagacaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgg 9309376  T
Q  496 gacatataactcacacttacacataaca 523  Q
    |||||||||||||||||| |||| ||||    
T  9309375 gacatataactcacacttgcacacaaca 9309348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 33113407 - 33113522
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||   |||||||||  ||| || |||||||||| |||    
T  33113407 agagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtagga 33113506  T
Q  498 catataactcacactt 513  Q
    ||||||||||| ||||    
T  33113507 catataactcaaactt 33113522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 3670192 - 3670063
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||| |||  |||||||||| |||  |||||||| ||||| |||||  ||| ||     
T  3670192 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattt 3670093  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  3670092 tatccgatgtgggacatataactcacactt 3670063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 5420783 - 5420654
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||||||| ||||||  ||||||||||  |||| |||||||||||| ||||||| || |||| ||||||||  ||||||||||  ||| |||    
T  5420783 caaccacacaagtgagggagacgtcacactcttacaaaaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattc 5420684  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||||||||||||||||  |||||||    
T  5420683 tatccgatgtgggacatataatacacactt 5420654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 377 - 513
Target Start/End: Original strand, 25561834 - 25561971
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacct-aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctc 475  Q
    |||| ||||||| ||||||  ||||||| |  |||||||||||  |||| |||||| |||||||||||||||| |||| |||||||| ||||||||| |     
T  25561834 gctagagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtt 25561933  T
Q  476 cacttttctatccgatgtgggacatataactcacactt 513  Q
     ||| || ||||||||||||||||||||||||||||||    
T  25561934 tactcttttatccgatgtgggacatataactcacactt 25561971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 34835008 - 34834879
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||||||||||| ||  ||| |||||||| ||||| |||||  ||| ||     
T  34835008 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattt 34834909  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||| ||||||||||||||||||||||||    
T  34834908 tatccaatgtgggacatataactcacactt 34834879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 40518714 - 40518585
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||| ||||  ||||||||||| |||| |||||| || || |||||||||| |||| | |||||| |||||||||||  |||||||    
T  40518714 caaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttc 40518615  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||||||||||||||||    
T  40518614 tatctgatgtgggacatataactcacactt 40518585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 409 - 509
Target Start/End: Complemental strand, 34835316 - 34835216
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| ||||  |||||||||||||||||||||| |||| |||||||| |||||||||||  ||| || |||| ||||||||||||||||||||    
T  34835316 acactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactca 34835217  T
Q  509 c 509  Q
    |    
T  34835216 c 34835216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 8918815 - 8918929
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||| ||||  |||||||||| |||| ||||||||||||||||||||  ||| | ||||| |||||||||||| |||||||    
T  8918815 acactcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactca 8918914  T
Q  509 cacttacacataaca 523  Q
    ||||| |||| ||||    
T  8918915 cacttgcacacaaca 8918929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 509
Target Start/End: Original strand, 70300 - 70425
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||| |||||  |||||||||||||||| ||||||||| || |||||||||| |||| ||||||||  |||||||| |  ||| ||     
T  70300 caaccacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttt 70399  T
Q  484 tatccgatgtgggacatataactcac 509  Q
    ||||||||||||||||||||||||||    
T  70400 tatccgatgtgggacatataactcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 377 - 506
Target Start/End: Original strand, 18372013 - 18372142
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| |||||||||||||| |||||| || | ||||||||||| |||| ||||| ||||||||||||||| | |||| |||||||| |||||||||||      
T  18372013 gctagagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaaccttt 18372112  T
Q  477 acttttctatccgatgtgggacatataact 506  Q
    ||| || |||  ||||||| ||||||||||    
T  18372113 actattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 30359741 - 30359612
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||| |||||||| | ||||||||||| ||||||||||||  ||| ||||||| || |||| |||||||| ||||||||| |  ||| ||     
T  30359741 caaccgcataagtaagagagacaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttt 30359642  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||| ||||||||||||||||||    
T  30359641 tatctgatgtgagacatataactcacactt 30359612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 30441217 - 30441084
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaa----gtgttcaacctccact 479  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||  |||| ||||||||     |||||||||||  |||    
T  30441217 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttact 30441118  T
Q  480 tttctatccgatgtgggacatataactcacactt 513  Q
     || || |||||||||||||||||||||||||||    
T  30441117 attttagccgatgtgggacatataactcacactt 30441084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 30359389 - 30359274
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| |||||||| ||| |||||||||| ||||  ||||||| ||||||||| |  ||| || ||||||||||| ||    
T  30359389 agagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgaga 30359290  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  30359289 catataactcacactt 30359274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 5915999 - 5915865
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||||||||||||||||||| ||    ||||||||||||| || ||  || |||     
T  5915999 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcct----cttataaagtgtt-aaactttacatttt 5915905  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||| |||| ||||||||||||||||||| |||| ||||    
T  5915904 tatccaatgtaggacatataactcacacttgcacacaaca 5915865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 502
Target Start/End: Complemental strand, 45122756 - 45122638
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||||| |||||| |||| |||| |||||| |||||||||||||||| |||| |||||||| |||||||||||  ||| ||     
T  45122756 caaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattt 45122657  T
Q  484 tatccgatgtgggacatat 502  Q
    ||||||||| ||| |||||    
T  45122656 tatccgatgcgggccatat 45122638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 509
Target Start/End: Original strand, 9482630 - 9482755
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||  | |||||||||   |||||||| |||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  9482630 caaccgcacaagcaagagagataccacactcttatacaaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttt 9482729  T
Q  484 tatccgatgtgggacatataactcac 509  Q
    ||||| |||||| |||||||||||||    
T  9482730 tatcccatgtggaacatataactcac 9482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 37544516 - 37544645
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||| ||| |||| | ||||||||||| |||| ||||| | ||||  ||||||||| ||||  ||||||| |||||||||||  ||| ||     
T  37544516 caaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttactattt 37544615  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||| ||| ||||||||||||||    
T  37544616 tatccgatgtgcgacttataactcacactt 37544645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 40518203 - 40518072
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac--ttt 481  Q
    ||||| ||||||  |||||||||| ||||||||||| |||| ||||||||| || |||||||||| |  | |||||||| |||||||||||  ||  |||    
T  40518203 caaccacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttacttttt 40518104  T
Q  482 tctatccgatgtgggacatataactcacactt 513  Q
    | ||||| |||||| |||||||||||||||||    
T  40518103 tttatccaatgtggaacatataactcacactt 40518072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 421 - 513
Target Start/End: Complemental strand, 40991848 - 40991756
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||| ||| ||||| || |||||||||| ||||||||||| ||||||||||||||||||||||||  | ||||||||| | ||||||||||||    
T  40991848 aaaaccttgaggcattgggtttatgggtcctctcacttatgaagtgttcaacctccacttttctaagcaatgtgggacttctaactcacactt 40991756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 511
Target Start/End: Complemental strand, 2467639 - 2467507
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| |||||||  ||||||||||||||||  ||||| ||||| ||||  ||||| ||| ||||||||| | |||||||| ||||  ||||||||| ||     
T  2467639 gctaaagcaaccatacaagtgagagagacgtcacacttttaccaaaaactttaagacaacgagtttatgtgctctctcacatata--gtgttcaacttct 2467542  T
Q  477 acttttctatccgatgtgggacatataactcacac 511  Q
    | |||||||||||| ||| ||||||||||||||||    
T  2467541 aattttctatccgacgtgagacatataactcacac 2467507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 6876913 - 6877028
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac-atataactc 507  Q
    ||||||||||| |||| | |||| |||||||| |||||||  ||| | |||||| |||||||||||  |||||| ||||||||||||||| |||||||||    
T  6876913 acactcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactatataactc 6877012  T
Q  508 acacttacacataaca 523  Q
    |||||| |||| ||||    
T  6877013 acacttgcacacaaca 6877028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 1014271 - 1014400
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||   ||||||| | ||||||||||| ||||  |||||| || ||||||| |||| |||| |||||||| |||||||||||  ||| ||     
T  1014271 caaccgcacaagcaggagagacaccacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaacctttactattt 1014370  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||  ||||||||||||||||||    
T  1014371 tatctgatgtatgacatataactcacactt 1014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 409 - 518
Target Start/End: Complemental strand, 5274882 - 5274773
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||  |||||||||||||||||| |||||||||  || || |||||||||||||||||||  ||||| ||| | |||| | ||||||||||||    
T  5274882 acactcttactcaaaatcttaaggcaatgattttatgggtcttcccatttataaagtgttcaacctctccttttttattcaatgtagaacatataactca 5274783  T
Q  509 cacttacaca 518  Q
     |||| ||||    
T  5274782 tacttgcaca 5274773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 400 - 513
Target Start/End: Original strand, 40579548 - 40579661
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 499  Q
    |||||| | |||||||||||||||| ||||| ||||| ||||||||||| |||| |||||||| |||||||||||  ||| || ||||| || ||  |||    
T  40579548 agagacaccacactcttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatatgaaaca 40579647  T
Q  500 tataactcacactt 513  Q
    ||||| ||||||||    
T  40579648 tataattcacactt 40579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 20870599 - 20870730
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||| | |||||||||||||| || |||||||||| |||| ||||||||  ||||||||||  ||| ||     
T  20870599 caaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattt 20870698  T
Q  484 tatccgatgtgggac--atataactcacactt 513  Q
    |||| ||||||| ||  |||||||||||||||    
T  20870699 tatctgatgtggaacatatataactcacactt 20870730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 523
Target Start/End: Original strand, 20995502 - 20995566
Alignment:
Q  459 ataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |||| ||||    
T  20995502 ataaagtgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaaca 20995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 1013897 - 1014026
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||| | ||||||   ||||||||||  ||||   |||||||||| |||||| ||| |||| |||||||  ||||||||| |  ||| ||     
T  1013897 caaccgcacaagtaaaagagacaacacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattt 1013996  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||||||| |||||||||||||||||    
T  1013997 tatccgatgtggaacatataactcacactt 1014026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 6732027 - 6731907
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||  |||||||| | ||||||||||  |||| ||||||||||||| |||||||||||||| |||         ||||||||  ||| ||     
T  6732027 caaccgcataagcaagagagacaccacactcttactcaaaaccttaaggcaatgaatttatgggttctcttact---------ttcaacctttactattt 6731937  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  6731936 tatccgatgtgggacatataactcacactt 6731907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 494
Target Start/End: Original strand, 34219208 - 34219269
Alignment:
Q  433 caatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 494  Q
    |||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||    
T  34219208 caataagtttatggatcctctctcttataaagtgttcaacctccacttttctaaccgatgtg 34219269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 509
Target Start/End: Complemental strand, 34835582 - 34835481
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc-cgatgtgggacatataactc 507  Q
    ||||||||||| ||||  |||||||||||||||||||||| |||| |||||||| ||||| |||||  ||| || ||||  || ||||||||||||||||    
T  34835582 acactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacatataactc 34835483  T
Q  508 ac 509  Q
    ||    
T  34835482 ac 34835481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 509
Target Start/End: Complemental strand, 34835848 - 34835747
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc-cgatgtgggacatataactc 507  Q
    ||||||||||| ||||  |||||||||||||||||||||| |||| |||||||| ||||| |||||  ||| || ||||  || ||||||||||||||||    
T  34835848 acactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacatataactc 34835749  T
Q  508 ac 509  Q
    ||    
T  34835748 ac 34835747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 1513966 - 1514070
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||| ||||| |||| |||||||  ||| ||||| |||| |||| |||||||| |||||||||||  ||| || |||||||||||||| ||||||||||    
T  1513966 acacttttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataactca 1514065  T
Q  509 cactt 513  Q
     ||||    
T  1514066 tactt 1514070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 491
Target Start/End: Original strand, 9483229 - 9483320
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgat 491  Q
    |||||| | ||||||||||| |||| |||||| ||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||    
T  9483229 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 493
Target Start/End: Complemental strand, 9609203 - 9609108
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 493  Q
    |||||||||| ||||||||||| ||||  ||||||| ||| ||||||||||  ||| ||||||||  ||||||||||  ||||||||||| |||||    
T  9609203 agagagacgccacactcttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 509
Target Start/End: Original strand, 18371680 - 18371807
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| ||||||||||||| ||||||| || | ||||||||||| |||| |||||||| ||| ||||||||||  ||| ||||    | ||||||||||      
T  18371680 gctagagcaaccgcacaaatgagagacacaccacactcttacccaaaaccttaaggc-atgggtttatgggtcttcttactt----aatgttcaaccttt 18371774  T
Q  477 acttttctatccgatgtgggacatataactcac 509  Q
    ||| || ||||||||||| ||||||||||||||    
T  18371775 actattttatccgatgtgtgacatataactcac 18371807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 32640572 - 32640682
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||| ||| |||| || ||     ||||||||||  ||| || ||||||||||| ||    
T  32640572 agagagacgcaacactcttacccaaaaccttaaggcaatgggtttatcggtcctcttaccta-----tgttcaacctttactcttttatccgatgtgaga 32640666  T
Q  498 catataactcacactt 513  Q
    || |||||||||||||    
T  32640667 cagataactcacactt 32640682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 512
Target Start/End: Original strand, 43398092 - 43398225
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctc---tcacttataaagtgttcaacctccac 478  Q
    ||||||||||| ||| | ||| |||| ||| ||||| | ||||  |||||||||||| ||||||||| |||   | | |||||| |||||||||||  ||    
T  43398092 agcaaccgcactagtaaaagaaacgccacattcttatccaaaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaacctttac 43398191  T
Q  479 ttttctatccgatgtgggacatataactcacact 512  Q
    ||||||||||||| || || ||||||||||||||    
T  43398192 ttttctatccgatatgagatatataactcacact 43398225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 518
Target Start/End: Original strand, 18372785 - 18372859
Alignment:
Q  444 tgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacaca 518  Q
    ||||| |||| |||||||| |||||||||||  ||| || ||||||||||| |||||||||||||||||| ||||    
T  18372785 tgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactttcaca 18372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 439 - 509
Target Start/End: Original strand, 41416252 - 41416322
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcac 509  Q
    |||||||| | |||| |||||||| |||||||||||  ||| || ||||||||||||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 453
Target Start/End: Complemental strand, 6651622 - 6651557
Alignment:
Q  388 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctct 453  Q
    ||||||||  |||||||| | ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  6651622 cgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgaatttatgggttctct 6651557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 523
Target Start/End: Original strand, 9620384 - 9620453
Alignment:
Q  454 cacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||| |||||||||||||| | | |||||| |||||||| |||||| |||| ||||    
T  9620384 cacttataaagtgttcaaactccacttttctattcaacgtgggatatataactgacacttgcacacaaca 9620453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 431 - 512
Target Start/End: Original strand, 18373004 - 18373085
Alignment:
Q  431 ggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacact 512  Q
    ||||||||||||||| || |||| | |||||| |||||||||||  ||| || ||||||| ||||||||||||| |||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataaatcacact 18373085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 524
Target Start/End: Complemental strand, 9309084 - 9308969
Alignment:
Q  411 actcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg--ggacatataactca 508  Q
    |||||| || |||| ||| |||||||| |||||||||| |||| ||||||||  |||||||| |  ||| || |||| ||||||  ||||||||||||||    
T  9309084 actcttgcccaaaacctttaggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactca 9308985  T
Q  509 cacttacacataacac 524  Q
    ||||| |||| |||||    
T  9308984 cacttgcacacaacac 9308969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 494
Target Start/End: Original strand, 15836450 - 15836528
Alignment:
Q  410 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 494  Q
    |||| ||| |||||||||||||||||||||| |||||    |||||||||  |||||||||||||||||||| ||||| ||||||    
T  15836450 cacttttatctaaaatcttaaggcaatgagtctatgg----tctcactta--aagtgttcaacctccactttactatcggatgtg 15836528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 523
Target Start/End: Complemental strand, 33832055 - 33831971
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||| ||| |||| |||||||||||||||||| || |||||||| | | | ||| |||||||||||||||||| |||| ||||    
T  33832055 gtttataggtcctcttacttataaagtgttcaacttctacttttctcttcaacgtgagacatataactcacacttgcacacaaca 33831971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 147952 - 147822
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||| |||||||| |||||||| | ||||||||||| |||| |||||||||||  |||||||||         |||||   |||||||| |  ||||||     
T  147952 caactgcacaagtaagagagacaccacactcttacccaaaaccttaaggcaataggtttatggg---------ttatatgttgttcaacatttacttttt 147862  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| ||||||||||||||||||||||||| |||| ||||    
T  147861 tatcagatgtgggacatataactcacacttgcacacaaca 147822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 484
Target Start/End: Complemental strand, 4715371 - 4715308
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 484  Q
    |||||||||||  ||||||||||| | |  ||||| ||||||||||||||||||||||||||||    
T  4715371 aaaatcttaagataatgagtttatagatcgtctcatttataaagtgttcaacctccacttttct 4715308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 18372353 - 18372416
Alignment:
Q  455 acttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacaca 518  Q
    |||||||| |||||||||||  ||| || ||||||||||| |||||||||||||||||| ||||    
T  18372353 acttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactttcaca 18372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 506
Target Start/End: Original strand, 25561729 - 25561792
Alignment:
Q  443 atgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataact 506  Q
    |||||| |||| |||||||| |||||||||||  ||| || |||||||||||||||||||||||    
T  25561729 atgggtactcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 474
Target Start/End: Complemental strand, 9507898 - 9507824
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 474  Q
    |||||||| ||||||||||| |||| ||||||| |||| ||||||| || |||| |||||||| || ||||||||    
T  9507898 agagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacct 9507824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 43274830 - 43274944
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||  |||| |||||| ||||  |||||||||| |||| ||||||||  | ||||||||  ||| || |||| ||||||  ||||||||||||    
T  43274830 acactcttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactca 43274929  T
Q  509 cacttacacataaca 523  Q
    |||||| ||| ||||    
T  43274930 cacttatacacaaca 43274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 483
Target Start/End: Complemental strand, 27856257 - 27856164
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||||||||| | ||||| ||| | |||||||||||||| || ||||||| || ||||  ||||||  ||| |||||||| |||||||    
T  27856257 cacaagtgagagagacacaacacttttatccaaaatcttaaggcagtgggtttatgagtcctctatcttatattgtgctcaacctctacttttc 27856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 474
Target Start/End: Complemental strand, 32305591 - 32305519
Alignment:
Q  402 agacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 474  Q
    |||||| ||||||||| | |||||||||||| |||| |||||| |||  ||| |||||||| |||||||||||    
T  32305591 agacgccacactcttatccaaaatcttaaggtaatgggtttataggtcttcttacttataaggtgttcaacct 32305519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 512
Target Start/End: Original strand, 18380068 - 18380171
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||  |||| ||||||| | || |||||| ||  | || |||||||| |||||||||||  ||| || ||| |||||||||| ||||||||||    
T  18380068 acactcttactcaaaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaacctttactattttattcgatgtgggatatataactca 18380167  T
Q  509 cact 512  Q
    ||||    
T  18380168 cact 18380171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 20995440 - 20995495
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatg 437  Q
    ||||||| |||||||||||||||| | ||| ||||||| |||| ||||||||||||    
T  20995440 agcaaccacacaagtgagagagacaccacattcttacccaaaaccttaaggcaatg 20995495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 518
Target Start/End: Complemental strand, 45123108 - 45123004
Alignment:
Q  412 ctcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacac 511  Q
    |||||||| |||| ||||||  |||  ||||||||||  ||| |||||  | ||||| |||||  ||| || ||||||||||||||||||||||||||||    
T  45123108 ctcttacccaaaaccttaagaaaataggtttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgggacatataactcacac 45123011  T
Q  512 ttacaca 518  Q
    || ||||    
T  45123010 ttgcaca 45123004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 518
Target Start/End: Original strand, 18372497 - 18372531
Alignment:
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    |||||||||||||||||||||||||||||| ||||    
T  18372497 tatccgatgtgggacatataactcacactttcaca 18372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 485
Target Start/End: Original strand, 40417600 - 40417646
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    |||||| |||||| | | |||||||||||||||||||||||||||||    
T  40417600 gtttataggttctattatttataaagtgttcaacctccacttttcta 40417646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 40417748 - 40417846
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatcc 488  Q
    |||||||||||||||| | ||||| ||| | |||||||||| ||||||  |||| | ||  ||| ||||||||||| | ||||||||  ||||||||||    
T  40417748 cacaagtgagagagacaccacacttttatccaaaatcttaacgcaatggatttacgagtcatcttacttataaagtatccaacctccttttttctatcc 40417846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Original strand, 34629729 - 34629762
Alignment:
Q  386 accgcacaagtgagagagacgctacactcttacc 419  Q
    |||||||||||||||||||||| |||||||||||    
T  34629729 accgcacaagtgagagagacgccacactcttacc 34629762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 40579295 - 40579348
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatg 437  Q
    ||||||||||||  |||||||| | ||||||||||| |||||| ||||||||||    
T  40579295 caaccgcacaagcaagagagacaccacactcttacccaaaatcctaaggcaatg 40579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 1357205 - 1357158
Alignment:
Q  115 taatcaaattatcttgtaacgctttattattgcaatcaataaatgatacaa 165  Q
    ||||||||||||||||||| |||| |||   ||||||||||||||||||||    
T  1357205 taatcaaattatcttgtaatgcttcatt---gcaatcaataaatgatacaa 1357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 523
Target Start/End: Original strand, 18645712 - 18645752
Alignment:
Q  483 ctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||| |||||||||||||||||| |||| ||||    
T  18645712 ctatccgatgtgagacatataactcacacttgcacacaaca 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 513
Target Start/End: Original strand, 30486257 - 30486377
Alignment:
Q  393 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 492  Q
    ||||||||||||||  | ||| ||||  ||||| |||| ||  ||||||||||| | ||  ||||| ||||||||||||||    ||||||||  | |||    
T  30486257 aagtgagagagacgtcatacttttactcaaaattttaaagccgtgagtttatggttccttccacttgtaaagtgttcaaccatttcttttctaatcaatg 30486356  T
Q  493 tgggacatataactcacactt 513  Q
    ||| |||||||||||||||||    
T  30486357 tggtacatataactcacactt 30486377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 45121707 - 45121810
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||  |||| ||||||||  |  |||||||| | |||| |||||||| ||| |||||||  ||| || |||||||||||||||| | ||||||    
T  45121707 acactcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgtgggaca-acaactca 45121805  T
Q  509 cactt 513  Q
    |||||    
T  45121806 cactt 45121810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 382 - 524
Target Start/End: Original strand, 47964542 - 47964684
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| |||||||||||||||||| ||||||||||| |||| |||||||||||  |||||||||| |||||||||||| || ||||||||||||| ||    
T  47964542 agcaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccacatt 47964641  T
Q  482 tctatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||| |||||||| ||||||||||| |||| |||||    
T  47964642 tctatccgatgcgggacatacaactcacacttgcacacaacac 47964684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 43346817 - 43346946
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||||||||||||||||||| |||||||| |||||||||||  ||| ||     
T  43346817 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattt 43346916  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||||||||||||||||    
T  43346917 tatctgatgtgggacatataactcacactt 43346946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 12114588 - 12114727
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||| |||||||| | ||||||||||| |||| |||||| ||||| |||||||||| |||| |||||||| |||||||||||  |||||||    
T  12114588 caaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttc 12114687  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||| |||||||| |||||| |||| ||||    
T  12114688 tatccgatgtgggatatataacttacacttgcacacaaca 12114727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 398 - 524
Target Start/End: Original strand, 21832385 - 21832509
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    ||||||||||  |||||||||| |||| |||||||| ||||||||||| || |||| |||||||| |||||||||||  |||||||||||| ||||||||    
T  21832385 agagagacgc--cactcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtggga 21832482  T
Q  498 catataactcacacttacacataacac 524  Q
    |||||||||||||||| ||||||||||    
T  21832483 catataactcacacttgcacataacac 21832509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 518
Target Start/End: Original strand, 39336270 - 39336389
Alignment:
Q  399 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 498  Q
    |||||| || ||||| ||| | |||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  39336270 gagagaggcaacactattatccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggac 39336369  T
Q  499 atataactcacacttacaca 518  Q
    ||||||||||||||| ||||    
T  39336370 atataactcacacttgcaca 39336389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 384 - 518
Target Start/End: Original strand, 29644607 - 29644741
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||  |||||||||| ||||||||||| |||| |||||| ||||| ||||||||||||||| |||||||| |||||||||||  ||| ||     
T  29644607 caaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactcttt 29644706  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
     ||||||||||||||||||||||||||||| ||||    
T  29644707 aatccgatgtgggacatataactcacacttgcaca 29644741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 46546376 - 46546490
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||  |||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||| |||| |||| ||||||||||||||    
T  46546376 acactcttacacaaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaacctccacatttcaatccaatgtaggacatataactca 46546475  T
Q  509 cacttacacataaca 523  Q
    |||||||||| ||||    
T  46546476 cacttacacacaaca 46546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 393 - 523
Target Start/End: Original strand, 47964950 - 47965080
Alignment:
Q  393 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 492  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| | ||||| |  |||||||||||| | |||| |||||||||||||||||||||||    
T  47964950 aagtgagagagacgccacactcttacccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccacttttctatccgatg 47965049  T
Q  493 tgggacatataactcacacttacacataaca 523  Q
    |   ||||||||||||||||| |||| ||||    
T  47965050 taaaacatataactcacacttgcacacaaca 47965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 25317292 - 25317161
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||||||||||||| || ||||||| ||||| |||| ||||||||||  ||||||||||| |||||| ||| |||||| ||||||||||||||    
T  25317292 agcaaccacacaagtgagagacacactacacttttacccaaaaccttaaggcaacaagtttatgggtcctctcagttacaaagtgctcaacctccacttt 25317193  T
Q  482 tctatccgatgtgggacatataactcacactt 513  Q
    || ||| | ||||||||| |||||||||||||    
T  25317192 tccatctggtgtgggacacataactcacactt 25317161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 22304701 - 22304572
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| || ||||||||  ||| ||     
T  22304701 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattt 22304602  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||||||||||||||| |||||||||    
T  22304601 tatccgatgtgggacatatagctcacactt 22304572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 29644928 - 29645067
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||  |||||||||| ||||||||||| |||| |||||| ||||| |||||||||| |||| |||||||| ||||| |||||  ||| ||     
T  29644928 caaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttt 29645027  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||||||||||||||| |||||| |||| ||||    
T  29645028 tatccgatgtgggacatataacttacacttgcacacaaca 29645067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 52634807 - 52634679
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||| |||||||  |||||||||  ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| | |||||||||  ||| ||     
T  52634807 caactgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgggtttatgggt-ctcttacttataaggcgttcaacctttactgttt 52634709  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  52634708 tatccgatgtgggacatataactcacactt 52634679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 389 - 513
Target Start/End: Complemental strand, 35946649 - 35946525
Alignment:
Q  389 gcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatcc 488  Q
    |||||||  |||||||| | ||||| ||||| |||| |||||||||| | |||||||||| |||| |||||||| |||||||||||  ||| || |||||    
T  35946649 gcacaagcaagagagacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatcc 35946550  T
Q  489 gatgtgggacatataactcacactt 513  Q
    |||||||||||||||||||||||||    
T  35946549 gatgtgggacatataactcacactt 35946525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 390 - 513
Target Start/End: Original strand, 33175691 - 33175819
Alignment:
Q  390 cacaagtgagagagacgctacac--tcttacctaaaatcttaaggcaatgagtttat---gggttctctcacttataaagtgttcaacctccacttttct 484  Q
    |||||||||||||||||  ||||  ||||||| |||| |||||||| ||||||||||   ||||||||| |||||||| |||||||||||  ||||||||    
T  33175691 cacaagtgagagagacgtcacacactcttacccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaacctttacttttct 33175790  T
Q  485 atccgatgtgggacatataactcacactt 513  Q
    ||| |||||| ||||||||||||||||||    
T  33175791 atctgatgtgagacatataactcacactt 33175819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 33803278 - 33803417
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||| ||| ||||||| ||||||||||| || | ||||| |||||| |||||||||| |||| |||||||  |||||||||||  ||| ||     
T  33803278 caaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattt 33803377  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||||||||||||||||||| || |||| ||||    
T  33803378 tatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 37990679 - 37990794
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||| || |||| |||||||| ||||||||| |  ||| || |||||||||||| |    
T  37990679 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaa 37990778  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  37990779 catataactcacactt 37990794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 39914384 - 39914245
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| ||||||||||||| | ||||||||| | ||||| |||||||| |  |||||||||| |||| | |||||| |||||||||||| ||| ||     
T  39914384 caaccgcataagtgagagagacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctactgttt 39914285  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| |||||| |||||||||||||||||| |||| ||||    
T  39914284 tatctgatgtgagacatataactcacacttgcacacaaca 39914245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 42342414 - 42342553
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||  ||||||||||| |||| |||||| |||||  ||||||||| |||| |||||||| ||||| |||||  ||| ||     
T  42342414 caaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttt 42342513  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| ||||||||||||||||||||||||| |||| ||||    
T  42342514 tatcggatgtgggacatataactcacacttgcacacaaca 42342553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 518
Target Start/End: Complemental strand, 15772986 - 15772852
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||| | |||| ||||| ||||||||||||||||| |||| |||||||| ||||||||| |  ||| ||     
T  15772986 caaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttt 15772887  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    |||||||| ||||||||||||||||||||| ||||    
T  15772886 tatccgatatgggacatataactcacacttgcaca 15772852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 513
Target Start/End: Original strand, 53118012 - 53118129
Alignment:
Q  395 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 494  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||| ||  | ||||||||||||| |||||||||||  ||| || |||||||| ||    
T  53118012 gtgagagagacactacactcttacccaaaatcttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaacctttactcttttatccgatatg 53118110  T
Q  495 ggacatataactcacactt 513  Q
    | |||||||||||||||||    
T  53118111 gaacatataactcacactt 53118129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 386 - 523
Target Start/End: Original strand, 25739453 - 25739590
Alignment:
Q  386 accgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    ||||||||||  |||||||||  ||||||||||| |||| || || ||||||||||||||||| |||| |||||||   |||||||| |  ||| || ||    
T  25739453 accgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactatttta 25739552  T
Q  486 tccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  25739553 tccgatgtgggacatataactcacacttgcacacaaca 25739590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 523
Target Start/End: Complemental strand, 8328025 - 8327897
Alignment:
Q  395 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 494  Q
    ||||||||||| | ||||||||||| |||| ||||||||| |  ||||||||||||||| ||||||||  | |||| |||  ||| || |||||||||||    
T  8328025 gtgagagagacaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtg 8327926  T
Q  495 ggacatataactcacacttacacataaca 523  Q
    ||||||||||||||||||| |||| ||||    
T  8327925 ggacatataactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 37991017 - 37991132
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| |||||||| |||||||||| ||| |||| |||||||| |||||||||||  ||| || ||||| ||||| ||    
T  37991017 agagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgaga 37991116  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  37991117 catataactcacactt 37991132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 54017842 - 54017981
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||| |||||||| | ||||||||||| |||| ||||||||  |  ||||||| || |||| |||||||| |||||||||||  ||| ||     
T  54017842 caaccacacaagtaagagagacaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttt 54017941  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||| ||||||||||||||||||| |||| ||||    
T  54017942 tatccgatgtaggacatataactcacacttgcacacaaca 54017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 32462926 - 32463056
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacc-tccactttt 482  Q
    ||||||||||||  |||||||| | ||||||||||  |||| |||||||||||| ||||||| ||  ||| |||||||| || ||||||| |  ||| ||    
T  32462926 caaccgcacaagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactctt 32463025  T
Q  483 ctatccgatgtgggacatataactcacactt 513  Q
    |||||||||||||||||||||||||||||||    
T  32463026 ctatccgatgtgggacatataactcacactt 32463056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 41359791 - 41359926
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||| ||||||||||| ||| ||||||| |||| |||||||||||| |||||||||| |||| |||||||| || ||||||||  ||| ||     
T  41359791 caaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattg 41359890  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||    ||||||||||||| |||| ||||    
T  41359891 tatccgatgtggg----ataactcacacttgcacacaaca 41359926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 377 - 523
Target Start/End: Original strand, 45395672 - 45395818
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| ||||||| |||||||||||||||| | ||||||||||| ||||  ||||| ||||| |||||||| | |||| |||||||| ||||| |||||      
T  45395672 gctagagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaaccttt 45395771  T
Q  477 acttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||| || ||| |||||||||| |||||||| |||||| |||| ||||    
T  45395772 actcttttattcgatgtgggatatataacttacacttgcacacaaca 45395818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 410 - 518
Target Start/End: Original strand, 1634366 - 1634475
Alignment:
Q  410 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc-acttttctatccgatgtgggacatataactca 508  Q
    |||||||||| |||| |||||| ||||| |||||||||| |||| |||||||| ||||| |||||   | ||||||||||||||||||||||||||||||    
T  1634366 cactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactca 1634465  T
Q  509 cacttacaca 518  Q
    ||||| ||||    
T  1634466 cacttgcaca 1634475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 509
Target Start/End: Original strand, 3135099 - 3135224
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||  |||| |||| |||| || ||||||||||||| | |||||||| ||||||||| |  ||| ||     
T  3135099 caaccgcacaagcaagagagacaccacactcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattt 3135198  T
Q  484 tatccgatgtgggacatataactcac 509  Q
    ||||||||||||||||||||||||||    
T  3135199 tatccgatgtgggacatataactcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 513
Target Start/End: Complemental strand, 4823762 - 4823658
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||||||||||||||||||||||||||| |||  |||||||| ||||| ||| |  ||| || ||||||||||| ||| |||||||||    
T  4823762 acactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttataactca 4823663  T
Q  509 cactt 513  Q
    |||||    
T  4823662 cactt 4823658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 426 - 518
Target Start/End: Original strand, 7767382 - 7767474
Alignment:
Q  426 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacaca 518  Q
    |||||| ||||| ||||||| || |||| | ||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  7767382 cttaagacaatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagacttacaca 7767474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 524
Target Start/End: Complemental strand, 9240280 - 9240141
Alignment:
Q  385 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 484  Q
    |||||||| | |||||||||| | ||| ||||| |  ||||||||||| ||||  ||||||||| |||| |||||||| ||||||| | |  |||| |||    
T  9240280 aaccgcactattgagagagacaccacattcttatccgaaatcttaaggtaatggatttatgggtcctcttacttataaggtgttcagcttttacttctct 9240181  T
Q  485 atccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||| ||||||||||||||||| |||| |||||    
T  9240180 atccgatgtggaacatataactcacacttgcacacaacac 9240141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 42342116 - 42342255
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||||||||||||||||| || |||| |||||||| |  || ||| |  ||| ||     
T  42342116 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggcattgaacatttactcttt 42342215  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||| |||||| | |||||||| |||| ||||    
T  42342216 tatccgatgtggaacatatgaatcacacttgcacacaaca 42342255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 513
Target Start/End: Complemental strand, 39389186 - 39389073
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 499  Q
    |||||| | ||||||||||| |||| |||||| ||||| |||||||||| |||| | || ||| |||||||||||  ||| || |||||||||| |||||    
T  39389186 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggaca 39389087  T
Q  500 tataactcacactt 513  Q
    ||||||||||||||    
T  39389086 tataactcacactt 39389073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 513
Target Start/End: Complemental strand, 45901837 - 45901716
Alignment:
Q  393 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactt-ttctatccgat 491  Q
    |||| |||||||| | ||||||||||| ||||  ||||||| ||||||||||| || |||| |||||||| |||||||||||    || || ||||||||    
T  45901837 aagtaagagagacaccacactcttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgat 45901738  T
Q  492 gtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||    
T  45901737 gtgggacatataactcacactt 45901716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 36986037 - 36986101
Alignment:
Q  447 gttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacac 511  Q
    |||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||    
T  36986037 gttctctcacttataaagttctcaaccttcacttttctattcgatgtgggacatataactcacac 36986101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 511
Target Start/End: Original strand, 37011476 - 37011540
Alignment:
Q  447 gttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacac 511  Q
    |||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||    
T  37011476 gttctctcacttataaagttctcaaccttcacttttctattcgatgtgggacatataactcacac 37011540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 54018239 - 54018363
Alignment:
Q  399 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 498  Q
    ||||||| | ||||||||||| |||| ||||||||  |  |||||||||| |||| |||||||| |||||||| ||  ||| || |||||||||  ||||    
T  54018239 gagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggac 54018338  T
Q  499 atataactcacacttacacataaca 523  Q
    ||||||||||||||| |||||||||    
T  54018339 atataactcacacttgcacataaca 54018363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 49336727 - 49336842
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| | ||  ||||| | ||| |||||||||| |||| |||||||| ||| |||||||  |||||||||||||||||| ||    
T  49336727 agagagacaccacactcttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgaga 49336826  T
Q  498 catataactcacactt 513  Q
    ||| ||||||||||||    
T  49336827 catgtaactcacactt 49336842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 523
Target Start/End: Complemental strand, 15773299 - 15773185
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| ||||  ||||||||||||| ||||| || |||| ||||||||  |||||||| |  ||| || ||| |||||||||||||||||||||    
T  15773299 acactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactca 15773200  T
Q  509 cacttacacataaca 523  Q
    ||||| |||| ||||    
T  15773199 cacttgcacacaaca 15773185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 410 - 523
Target Start/End: Complemental strand, 32589809 - 32589697
Alignment:
Q  410 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcac 509  Q
    |||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  | | || ||||  ||||||||||||| ||||||    
T  32589809 cactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatcttatgtgggacatat-actcac 32589711  T
Q  510 acttacacataaca 523  Q
    |||| |||| ||||    
T  32589710 acttgcacacaaca 32589697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 384 - 507
Target Start/End: Original strand, 39934981 - 39935104
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||||||||   ||||||||||  ||||  ||||||||||| |||||||| | |||| |||||||| |||||||||||  ||| ||     
T  39934981 caaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttt 39935080  T
Q  484 tatccgatgtgggacatataactc 507  Q
    |||||||||| |||||||||||||    
T  39935081 tatccgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 476
Target Start/End: Original strand, 39336002 - 39336088
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||||| ||||||||| | ||||||||||| |||| ||||||||||||| |||||| ||  | ||| ||||||||||||||||||||    
T  39336002 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgattttatgagtcttatcatttataaagtgttcaacctcc 39336088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 506
Target Start/End: Original strand, 42584864 - 42584970
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 499  Q
    |||||| | |||||||| |  ||||||||||| ||||  |||||||| | |||| |||||||| |||||||| ||  ||| |||||||||||||||||||    
T  42584864 agagacaccacactctttctcaaaatcttaagacaattggtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggaca 42584963  T
Q  500 tataact 506  Q
    |||||||    
T  42584964 tataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 518
Target Start/End: Original strand, 3384317 - 3384426
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| ||||  |||||||| | ||||||||||| ||||  ||||||||||||| |||||  ||| || ||||  |||||||||||||||||||    
T  3384317 acactcttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatataactca 3384416  T
Q  509 cacttacaca 518  Q
    | ||| ||||    
T  3384417 cgcttgcaca 3384426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 31190091 - 31190010
Alignment:
Q  442 tatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||| |||| |||||||| |||||||||||  ||| || ||||||||||||||||||| |||||||||| |||| ||||    
T  31190091 tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaaca 31190010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 510
Target Start/End: Original strand, 54451239 - 54451328
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcaca 510  Q
    |||| |||||| |||| ||| ||||| |  ||||||| ||||||||||||||||||| |||||| |  ||||||||||||||||||||||    
T  54451239 aaaaccttaagacaataagtatatggatcatctcactcataaagtgttcaacctccatttttctttttgatgtgggacatataactcaca 54451328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 16871010 - 16871062
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  16871010 acactcttacctaaaaccttaaggcaatgagtttatgggttccctctcttata 16871062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 523
Target Start/End: Original strand, 12747870 - 12747917
Alignment:
Q  476 cacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  12747870 cacttttctatccgatgtgggacatataactcacacttgcacacaaca 12747917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 33809071 - 33809173
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacata 520  Q
    |||| |||||| ||| ||||||||  ||| ||| ||| |||||||||||||  | || ||||||||| |||||||||||||||||| |||||| |||| |    
T  33809071 aaaaccttaagacaacgagtttattagttttcttactcataaagtgttcaatatgcaattttctatctgatgtgggacatataacttacacttgcacaca 33809170  T
Q  521 aca 523  Q
    |||    
T  33809171 aca 33809173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 516
Target Start/End: Complemental strand, 11662072 - 11661951
Alignment:
Q  396 tgagagagacgctacactcttacctaaaatc-ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 494  Q
    |||||||||| |  |||||||||| |||| | ||||||||||  ||||||| |  ||||||||| ||| |||||||||||  ||| || ||||| |||||    
T  11662072 tgagagagacacctcactcttacccaaaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttcaacctttactcttttatccaatgtg 11661973  T
Q  495 ggacatataactcacacttaca 516  Q
    || ||| |||||||||||||||    
T  11661972 gggcatttaactcacacttaca 11661951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 478
Target Start/End: Complemental strand, 12749276 - 12749207
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac 478  Q
    ||||||||| | |||| ||||| |||||  |||||||||| ||| |||||||||||||||||||||||||    
T  12749276 acactcttatcaaaaaccttaatgcaattggtttatgggtcctcacacttataaagtgttcaacctccac 12749207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 25755526 - 25755397
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||| ||||| | ||  ||| | |||||  |||||| || |||| |||||||| || ||||||||  ||| ||     
T  25755526 caaccgcacaagcaagagagacgccacacttttacccacaactttaggacaatggatttatgagtcctcttacttataaggtattcaacctttactcttt 25755427  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||| ||||||||||||||||||    
T  25755426 tatctgatgtgagacatataactcacactt 25755397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 440 - 513
Target Start/End: Original strand, 50612534 - 50612607
Alignment:
Q  440 tttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||||| || |||| |||||||| |||||||| ||  ||| || ||||||||||||||||||||||||||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacactt 50612607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 513
Target Start/End: Complemental strand, 51886645 - 51886564
Alignment:
Q  432 gcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||| |||| |||||||   ||||||||||  ||| || ||| ||||||| ||||||||||||||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacactt 51886564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 462
Target Start/End: Complemental strand, 52635047 - 52634994
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 462  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| | ||||||    
T  52635047 acactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataa 52634994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 523
Target Start/End: Complemental strand, 53577482 - 53577357
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| || | |||||||||||  |||||||| | | || | || |||  ||||||||||  ||| || ||||||||||| ||    
T  53577482 agagagacaccacactcttacccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtga 53577383  T
Q  498 catataactcacacttacacataaca 523  Q
    |||||||||||||||| |||| ||||    
T  53577382 catataactcacacttgcacacaaca 53577357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 2417412 - 2417348
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    |||| ||||| ||| ||||||||| | |||||||||||||||| ||||||| |||||||||||||    
T  2417412 aaaaccttaaagcattgagtttatagattctctcacttataaaatgttcaatctccacttttcta 2417348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 53596595 - 53596543
Alignment:
Q  396 tgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggt 448  Q
    |||||||||| | ||||||||||||||||||||||| ||||| ||||||||||    
T  53596595 tgagagagacaccacactcttacctaaaatcttaagtcaatgggtttatgggt 53596543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 458
Target Start/End: Original strand, 22303689 - 22303759
Alignment:
Q  388 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcactt 458  Q
    ||||||||| ||||| || | ||||||||||| |||| |||||||||||| |||||||||| |||| ||||    
T  22303689 cgcacaagtaagagaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 474
Target Start/End: Original strand, 33362334 - 33362409
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 474  Q
    ||||||||||| |||||  |||| |||||||||||| |||| |||||||||| |||| |||||||| || ||||||||    
T  33362334 gagagagacgccacact--tacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacct 33362409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 523
Target Start/End: Complemental strand, 2300026 - 2299969
Alignment:
Q  466 gttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| ||||||||||||||||| || |||||||||||||| ||||||| |||| ||||    
T  2300026 gttctacctccacttttctatctgacgtgggacatataacccacacttgcacacaaca 2299969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 464 - 513
Target Start/End: Complemental strand, 22304298 - 22304249
Alignment:
Q  464 gtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||||||  ||| || ||||||||||||||||||||||||||||||    
T  22304298 gtgttcaacctttactattttatccgatgtgggacatataactcacactt 22304249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 513
Target Start/End: Complemental strand, 25991498 - 25991406
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||| ||||||||| |  |||||| |||||||||||||||||| |||| ||| |  |||| | |||  |||||||||||||| ||||||||||    
T  25991498 aaaaccttaaggcattaggtttataggttctctcacttataaaatgtttaacattaacttgtttatttgatgtgggacatattactcacactt 25991406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 447
Target Start/End: Original strand, 3135480 - 3135543
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatggg 447  Q
    ||||||||||||  | |||||| | ||||||||| |||||| |||||||||||| |||||||||    
T  3135480 caaccgcacaagcaaaagagacaccacactcttatctaaaaccttaaggcaatgggtttatggg 3135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 461
Target Start/End: Original strand, 17735043 - 17735094
Alignment:
Q  410 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    |||||||||| |||| |||||| |||||||||||||||||| ||| ||||||    
T  17735043 cactcttacccaaaaccttaagtcaatgagtttatgggttccctctcttata 17735094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 461
Target Start/End: Original strand, 19036312 - 19036363
Alignment:
Q  410 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    |||||||||| |||| |||||| |||||||||||||||||| ||| ||||||    
T  19036312 cactcttacccaaaaccttaagtcaatgagtttatgggttccctctcttata 19036363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 483
Target Start/End: Complemental strand, 33153652 - 33153589
Alignment:
Q  420 taaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||| ||||| |||||||||| ||  || |||  ||||||||||||||||||||||||||||    
T  33153652 taaaattttaagacaatgagtttttgaattatcttgcttataaagtgttcaacctccacttttc 33153589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 523
Target Start/End: Complemental strand, 43346702 - 43346643
Alignment:
Q  464 gtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||  ||| || |||||||||||||||||| ||||||||||| |||| ||||    
T  43346702 gtgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaaca 43346643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 474
Target Start/End: Original strand, 44160579 - 44160660
Alignment:
Q  392 caagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 474  Q
    ||||| |||||||||| ||| ||||||| |||| |||||| ||||| |||||||| | |||| | |||||| |||||||||||    
T  44160579 caagtaagagagacgccacattcttacc-aaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaacct 44160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 510
Target Start/End: Original strand, 54769708 - 54769766
Alignment:
Q  452 ctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcaca 510  Q
    ||||||||||||||| ||||| | |||||||||||  |||||  |||||||||||||||    
T  54769708 ctcacttataaagtgatcaactttcacttttctatttgatgtacgacatataactcaca 54769766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 513
Target Start/End: Complemental strand, 11661567 - 11661538
Alignment:
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  11661567 tatccgatgtgggacatataactcacactt 11661538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 446
Target Start/End: Original strand, 16868434 - 16868471
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgg 446  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  16868434 acactcttatccaaaatcttaaggcaatgagtttatgg 16868471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 22303995 - 22304103
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||| | |||| |||||||||||| |||||||||| | || ||||||||        ||||  ||| || |||| |||||||||    
T  22303995 agagagacaccacactcttatccaaaaccttaaggcaatgggtttatgggtccgcttacttataa-------gacctttactattttatctgatgtggga 22304087  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  22304088 catataactcacactt 22304103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 461
Target Start/End: Original strand, 54017590 - 54017651
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    |||||| | ||||||||||| |||| |||||||||||| |||||||| ||| ||| ||||||    
T  54017590 agagacaccacactcttacccaaaaccttaaggcaatgggtttatggattccctctcttata 54017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 1085642 - 1085781
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||| |||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||| ||||||||||||||||||||  ||| ||     
T  1085642 caaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattt 1085741  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  1085742 tatccgatgtgggacatataactcacacttgcacacaaca 1085781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 7517712 - 7517573
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||||||| |||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  7517712 caaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttt 7517613  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  7517612 tatccgatgtgggacatataactcacacttgcacacaaca 7517573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 30244402 - 30244273
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||||||||||||| | ||||||||||| |||| |||||||||||| ||||||| || |||| |||||||| || ||||||||  ||| ||     
T  30244402 caaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttt 30244303  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  30244302 tatccgatgtgggacatataactcacactt 30244273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 390 - 523
Target Start/End: Complemental strand, 7554151 - 7554018
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    |||||| ||||||||| | ||||||||||| |||| |||||||| ||| |||||||| | |||| |||||||| |||||||||||  ||| || ||||||    
T  7554151 cacaagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccg 7554052  T
Q  490 atgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||| |||| ||||    
T  7554051 atgtgggacatataactcacacttgcacacaaca 7554018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 24177567 - 24177428
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||||||||| ||||  ||||||||||| |||||||||| | || |||||||| ||||||| |||  ||| ||     
T  24177567 caaccgcacaagcaagagagacgccacactcttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttt 24177468  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||||||||||||||||||| |||| |||| ||||    
T  24177467 tatccgatgtgggacatataactcatacttgcacacaaca 24177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 30245195 - 30245080
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||||||  ||| |||||||| |||||||||||  ||| || |||||||||||| |    
T  30245195 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaa 30245096  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  30245095 catataactcacactt 30245080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 390 - 513
Target Start/End: Complemental strand, 45434762 - 45434639
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    ||||||| ||||||||   ||||||||||| |||| ||||||||| | ||||||||||| |||| |||||||| |||||||||||  |||||| ||||||    
T  45434762 cacaagtaagagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccg 45434663  T
Q  490 atgtgggacatataactcacactt 513  Q
    ||||||||||||||||| ||||||    
T  45434662 atgtgggacatataacttacactt 45434639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 22567065 - 22567193
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  ||| ||     
T  22567065 caaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttt 22567164  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||||| |||||||| ||||||||||    
T  22567165 tatccgatgt-ggacatattactcacactt 22567193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 388 - 513
Target Start/End: Original strand, 37533041 - 37533165
Alignment:
Q  388 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 487  Q
    ||||||||  |||||||| | ||||| ||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  ||| || ||||    
T  37533041 cgcacaagcaagagagacaccacact-ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatc 37533139  T
Q  488 cgatgtgggacatataactcacactt 513  Q
    | ||||||||||||||||||||||||    
T  37533140 caatgtgggacatataactcacactt 37533165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 45433373 - 45433244
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| ||||||||||||||||  ||||||| ||||||| |||||||| |||||||||||  ||| ||     
T  45433373 caaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttt 45433274  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||  ||||||||||||||||    
T  45433273 tatccgatgtggatcatataactcacactt 45433244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 22566713 - 22566817
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||||||||||| |||||    
T  22566713 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactca 22566812  T
Q  509 cactt 513  Q
    |||||    
T  22566813 cactt 22566817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 23403 - 23542
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||| |  |||||||| | ||||||||||| |||| |||||||||||  |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  23403 caaccgcacatgcaagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattg 23502  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||| |||||||||||||| || |||| ||||    
T  23503 tatccgatgtggaacatataactcacaattgcacacaaca 23542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 410 - 513
Target Start/End: Complemental strand, 16569302 - 16569199
Alignment:
Q  410 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcac 509  Q
    |||||||||| |||| |||||||||||| |||||||||| |||| |||||||| || ||||||||  ||| |||||||||||||| ||||||||||||||    
T  16569302 cactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcac 16569203  T
Q  510 actt 513  Q
    ||||    
T  16569202 actt 16569199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 410 - 513
Target Start/End: Original strand, 16596360 - 16596463
Alignment:
Q  410 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcac 509  Q
    |||||||||| |||| |||||||||||| |||||||||| |||| |||||||| || ||||||||  ||| |||||||||||||| ||||||||||||||    
T  16596360 cactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcac 16596459  T
Q  510 actt 513  Q
    ||||    
T  16596460 actt 16596463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 391 - 510
Target Start/End: Original strand, 34218067 - 34218186
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 490  Q
    ||||| ||||||||| | ||||||||||| |||| |||||| ||||| ||||||| || ||||||||||||| ||||||||| |  |||||| |||||||    
T  34218067 acaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccga 34218166  T
Q  491 tgtgggacatataactcaca 510  Q
    |||| |||||||||||||||    
T  34218167 tgtgagacatataactcaca 34218186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 41910657 - 41910759
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacata 520  Q
    ||||||||||| ||||| |||||||||| |||||| |||||| || ||||||||  ||| || ||||||||||||||||||||||||||||||||||| |    
T  41910657 aaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacaca 41910756  T
Q  521 aca 523  Q
    |||    
T  41910757 aca 41910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 29157683 - 29157568
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| ||||||||||||  |||||||||  ||| |||||||| |||||||||||  ||| || |||||| |||||||    
T  29157683 agagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtggga 29157584  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  29157583 catataactcacactt 29157568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 40094800 - 40094939
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||||| ||||||||||| |||| |||||| | ||| |||||||||| |||| |||||||| ||||| |||||  ||| ||     
T  40094800 caacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttt 40094899  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||| ||||||| |||||||||||||||||| |||| ||||    
T  40094900 tattcgatgtgagacatataactcacacttgcacacaaca 40094939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 118340 - 118466
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 496  Q
    |||| |||||| ||||||||||| |||| |||| || |||| |||||||| | |||| |||||| | |||||||||||  ||||||||||| ||||||||    
T  118340 gagatagacgccacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtggg 118439  T
Q  497 acatataactcacacttacacataaca 523  Q
    |||||||||| |||||| |||| ||||    
T  118440 acatataacttacacttgcacacaaca 118466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 399 - 513
Target Start/End: Complemental strand, 6054677 - 6054563
Alignment:
Q  399 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 498  Q
    ||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| ||||||||| |  ||| || ||||||||||| |||    
T  6054677 gagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagac 6054578  T
Q  499 atataactcacactt 513  Q
    |||||||| ||||||    
T  6054577 atataactaacactt 6054563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 428 - 526
Target Start/End: Original strand, 28301613 - 28301711
Alignment:
Q  428 taaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataacacaa 526  Q
    |||||||||| |||||||||| |||| |||||||| ||||||| | |  |||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaacacaa 28301711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 445 - 506
Target Start/End: Complemental strand, 10341903 - 10341842
Alignment:
Q  445 gggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataact 506  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10341903 gggttctcccacttataaagtgttcaacctccacttttctatccgatgtgagacatataact 10341842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 509
Target Start/End: Complemental strand, 11845323 - 11845198
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||| |||||||  |||||||| | ||||||||| | |||| ||||||||||||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  11845323 caactgcacaagcaagagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattt 11845224  T
Q  484 tatccgatgtgggacatataactcac 509  Q
    |||||||||||| |||||||||||||    
T  11845223 tatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 382 - 524
Target Start/End: Complemental strand, 37346052 - 37345908
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||||| | ||||||||||||||||  ||||||||||  ||||  ||||||||||  ||||||||||  ||||||||||||| |||| ||||||||||||    
T  37346052 agcaactgtacaagtgagagagacgtcacactcttactcaaaactttaaggcaatatgtttatgggtcttctcacttataaaatgtttaacctccacttt 37345953  T
Q  482 tctatccgatgtgggac--atataactcacacttacacataacac 524  Q
    |||||| ||| |  |||  ||||||||||||||| |||| |||||    
T  37345952 tctatcagatatatgacatatataactcacacttgcacacaacac 37345908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 375 - 523
Target Start/End: Original strand, 8128458 - 8128606
Alignment:
Q  375 atgctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 474  Q
    |||||| | ||||| || ||| ||||| ||| | ||||||||| | |||| |||||||  ||| |||||||||| |||| || ||||| |||||||||||    
T  8128458 atgctagaacaaccacataagcgagagtgacaccacactcttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacct 8128557  T
Q  475 ccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
      | ||||||||||||| ||||||||||||||||||||| |||| ||||    
T  8128558 ttatttttctatccgatatgggacatataactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 384 - 516
Target Start/End: Original strand, 37533390 - 37533522
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  | |||||| | ||||||||||| |||| ||||||||||||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  37533390 caaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattt 37533489  T
Q  484 tatccgatgtgggacatataactcacacttaca 516  Q
    ||| | |||| | ||||||||||||||||||||    
T  37533490 tattcaatgtagaacatataactcacacttaca 37533522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 393 - 523
Target Start/End: Original strand, 4124123 - 4124253
Alignment:
Q  393 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 492  Q
    ||||||||||||| | ||||| ||| | |||| ||||| ||||||||||||| ||| ||||||||||||||||||  |||||| | ||||||| ||||||    
T  4124123 aagtgagagagacaccacacttttatccaaaaccttaatgcaatgagtttattggtcctctcacttataaagtgtcaaacctcaaattttctaaccgatg 4124222  T
Q  493 tgggacatataactcacacttacacataaca 523  Q
    | |||||| ||| ||||| || |||| ||||    
T  4124223 taggacatgtaattcacagttgcacacaaca 4124253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 398 - 475
Target Start/End: Complemental strand, 30253610 - 30253533
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctc 475  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||||||||||| |||||||| || |||||||||    
T  30253610 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacctc 30253533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 36534825 - 36534949
Alignment:
Q  399 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 498  Q
    ||||||||| ||||||||||| |||| |||||| |  |  |||||||||| |||| |||||||| |||||||||||| ||| || ||||||| |||||||    
T  36534825 gagagacgccacactcttacccaaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggac 36534924  T
Q  499 atataactcacacttacacataaca 523  Q
    |||||| | |||||| |||| ||||    
T  36534925 atataagttacacttgcacacaaca 36534949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 43241596 - 43241488
Alignment:
Q  415 ttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactta 514  Q
    |||||||||| |||||| |||| |||||||| || || | |||||||| |||||||||||  | |||| |||||||||||| |||||||||||||||||     
T  43241596 ttacctaaaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttg 43241497  T
Q  515 cacataaca 523  Q
    |||| ||||    
T  43241496 cacacaaca 43241488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 1085299 - 1085414
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacat-ataactc 507  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| |||||| |  |||||||| |  ||| || |||||||| |||||||| | |||||    
T  1085299 acactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgatatgggacataaaaactc 1085398  T
Q  508 acacttacacataaca 523  Q
    |||||| |||| ||||    
T  1085399 acacttgcacacaaca 1085414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 36939759 - 36939898
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||  ||||| || | ||||| ||||| |||| ||||||||||||  ||||||||| |||| |||||||| ||||||||| |  ||| ||     
T  36939759 caaccgcataagcaagagaaacaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattt 36939858  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||| |||| ||||||||||||||||||||| |||| ||||    
T  36939859 tatacgatttgggacatataactcacacttgcacagaaca 36939898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 514
Target Start/End: Complemental strand, 9901775 - 9901647
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||| ||  |||||||| | ||||||||||| |||| |||||| |||||||||||||| | |||| || |||||  ||||||||||  ||| ||     
T  9901775 caaccgcactagcaagagagacaccacactcttacccaaaaccttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttt 9901677  T
Q  484 tatccgatgtgggacatataactcacactta 514  Q
    |||||||||| ||||||||||||||||||||    
T  9901676 tatccgatgt-ggacatataactcacactta 9901647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 513
Target Start/End: Complemental strand, 14681627 - 14681513
Alignment:
Q  399 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 498  Q
    ||||||| | ||||||||||| |||| |||||| ||||| |||||||||  |||| ||||| || |||||||||||  ||| || |||| ||||||||||    
T  14681627 gagagacaccacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggac 14681528  T
Q  499 atataactcacactt 513  Q
    |||||||| ||||||    
T  14681527 atataacttacactt 14681513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 514
Target Start/End: Complemental strand, 20599418 - 20599316
Alignment:
Q  412 ctcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacac 511  Q
    |||||||| ||||  ||||||||||||||||||  || |||| | |||||||||||| | |||  |||||| |||||||| |||||||||||||||||||    
T  20599418 ctcttacccaaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttatcctttacttttttatccgatatgggacatataactcacac 20599319  T
Q  512 tta 514  Q
    |||    
T  20599318 tta 20599316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 395 - 513
Target Start/End: Complemental strand, 47129216 - 47129098
Alignment:
Q  395 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 494  Q
    ||||||||||| | |||||| |||| |||| ||||| || ||| |||||||||| |||| ||||||||   |||||||||  ||| || |||||||||||    
T  47129216 gtgagagagacaccacactcctacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtg 47129117  T
Q  495 ggacatataactcacactt 513  Q
     ||||||||||||||||||    
T  47129116 agacatataactcacactt 47129098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 28300293 - 28300366
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttat-gggttctctcacttataaagtgttca 470  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| |||||||    
T  28300293 agagagacgccacactcttacccaaaatcttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 45754847 - 45754719
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||| ||| ||||||| ||  ||| |||||||| ||||||||| |  ||| ||     
T  45754847 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattt 45754748  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||||| |||||||||||||||||||    
T  45754747 tatccgatgt-ggacatataactcacactt 45754719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 518
Target Start/End: Complemental strand, 15902426 - 15902298
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    |||||||||||| ||| | ||||| ||| | |||| |||||| ||| ||| ||||| ||  | ||||||||||||||||||||||||||||| | |||||    
T  15902426 cacaagtgagagcgacaccacacttttatccaaaaccttaagacaacgagcttatgtgtgatttcacttataaagtgttcaacctccactttcccatccg 15902327  T
Q  490 atgtgggacatataactcacacttacaca 518  Q
    || |   |||||||||||| |||||||||    
T  15902326 atctacaacatataactcaaacttacaca 15902298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 508
Target Start/End: Complemental strand, 19122863 - 19122740
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||| |||| | ||||||||||| |||| ||||||||||||  |||||| || |||| |||||||| |||||||||||  ||| ||     
T  19122863 caaccacacaagcaagatagacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattt 19122764  T
Q  484 tatccgatgtgggacatataactca 508  Q
    |||||||||| ||||||||||||||    
T  19122763 tatccgatgt-ggacatataactca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 518
Target Start/End: Complemental strand, 36623086 - 36622958
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    ||||||| |||||| | | | |||| |||| |||| ||||||||||||  ||||||| | |||  ||||||||| |||| |||||  ||| || ||||||    
T  36623086 cacaagtaagagaggcaccatactcctacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccg 36622987  T
Q  490 atgtgggacatataactcacacttacaca 518  Q
    |||||||||||||||||||||||| ||||    
T  36622986 atgtgggacatataactcacacttgcaca 36622958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 384 - 511
Target Start/End: Complemental strand, 30032699 - 30032572
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  ||||||| |  ||||||||||| |||| |||||||| ||  |||||||| | |||| |||||||| |||||||||    ||| ||     
T  30032699 caaccgcacaagcaagagagatgtcacactcttacccaaaaccttaaggctataggtttatggatactcttacttataaggtgttcaacacttactcttt 30032600  T
Q  484 tatccgatgtgggacatataactcacac 511  Q
    ||| ||||||||||||||||||||||||    
T  30032599 tattcgatgtgggacatataactcacac 30032572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 24838727 - 24838867
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttct-ctcacttataaagtgttcaacctccactttt 482  Q
    ||||| ||||||  |||||||||  ||||||||||| |||| |||||| ||| | |||||||| | || || |||||||| |||||||||||  ||| ||    
T  24838727 caaccacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactctt 24838826  T
Q  483 ctatccgatgtgggacatataactcacacttacacataaca 523  Q
     ||| ||||||| ||||||||||| ||||||| ||| ||||    
T  24838827 ttattcgatgtgagacatataacttacacttatacacaaca 24838867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 518
Target Start/End: Original strand, 40230331 - 40230451
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | | ||| ||||| |||| |||||| | ||| |||||||||| |||| ||||||||  |||||||| |  |||||| ||| ||||||||||    
T  40230331 agagagacaccagacttttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtggga 40230430  T
Q  498 catataactcacacttacaca 518  Q
    ||||||||| |||||| ||||    
T  40230431 catataacttacacttgcaca 40230451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 523
Target Start/End: Complemental strand, 30245560 - 30245487
Alignment:
Q  450 ctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| |||||||| |||||||||||  ||| || |||| ||||||||||||||||||||||||| |||| ||||    
T  30245560 ctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaaca 30245487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 523
Target Start/End: Complemental strand, 30255405 - 30255332
Alignment:
Q  450 ctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| |||||||| |||||||||||  ||| || |||||||||||||||||||||| ||||||| |||| ||||    
T  30255405 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaaca 30255332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 10342338 - 10342275
Alignment:
Q  434 aatgagtttatgggttctctc--acttataaagtgttcaacctccacttttctatccgatgtgg 495  Q
    |||||||||||||||||||||  |||||||||||||| |||||| ||||||||||  |||||||    
T  10342338 aatgagtttatgggttctctcccacttataaagtgtttaacctctacttttctatatgatgtgg 10342275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 485
Target Start/End: Original strand, 42282101 - 42282145
Alignment:
Q  441 ttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    |||||||| || |||||||||||||||||||||||||||||||||    
T  42282101 ttatgggtcctttcacttataaagtgttcaacctccacttttcta 42282145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 523
Target Start/End: Complemental strand, 30244760 - 30244694
Alignment:
Q  457 ttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||| |||||||||||  ||| || ||||| |||||||||||||||||||||||| |||| ||||    
T  30244760 ttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaaca 30244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 518
Target Start/End: Complemental strand, 41854766 - 41854633
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||| ||| |||||  ||||||||||| |||| ||||||||| |   ||||| |||  |||  ||||||| |||||||||||  ||| ||     
T  41854766 caaccgcacaagtaagaaagacgtcacactcttacccaaaaccttaaggcattatatttataggtcatcttgcttataaggtgttcaacctttactcttt 41854667  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    || | |||||||||||||||||||| |||| ||||    
T  41854666 ta-ctgatgtgggacatataactcatacttgcaca 41854633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 523
Target Start/End: Original strand, 36109009 - 36109082
Alignment:
Q  450 ctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||| |||||||| |||||||||||  ||| || ||||||||||| || ||||||||||||||| |||| ||||    
T  36109009 ctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaaca 36109082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 37345607 - 37345559
Alignment:
Q  470 aacctccacttttctatccgatgtgggacatataactcacacttacaca 518  Q
    |||||||||||| |||| |||||||||||||||||||||| ||| ||||    
T  37345607 aacctccactttcctattcgatgtgggacatataactcactcttgcaca 37345559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 37345715 - 37345652
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatg 445  Q
    |||||||| ||||||||||||||||  | ||||||||| |||| |||||||||||  |||||||    
T  37345715 agcaaccgtacaagtgagagagacgtcagactcttaccaaaaaccttaaggcaatatgtttatg 37345652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 498
Target Start/End: Original strand, 45335547 - 45335605
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 498  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||| |||| || ||||||    
T  45335547 gtttatgggttctctcacttataaagtgctcaacatcca-ttttccatccaatctgggac 45335605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Original strand, 36967348 - 36967384
Alignment:
Q  477 acttttctatccgatgtgggacatataactcacactt 513  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  36967348 acttttttatccgatgtgagacatataactcacactt 36967384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 513
Target Start/End: Complemental strand, 42730403 - 42730319
Alignment:
Q  429 aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    ||||||||  ||||||||||  | ||| ||||||| || |||||||||||||||| | ||||||||| || | ||||||| ||||    
T  42730403 aaggcaattggtttatgggtcttttcatttataaaatgatcaacctccacttttcaaaccgatgtggaacttctaactcagactt 42730319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 482
Target Start/End: Original strand, 46899401 - 46899448
Alignment:
Q  434 aatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||||||||||| |||||| |||||| ||||||||| |||||||||||    
T  46899401 aatgagtttatggattctctaacttat-aagtgttcatcctccactttt 46899448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 1028543 - 1028672
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||  ||  |||||||||| |||| |||||||||||||||| |||  |||||||    
T  1028543 caaccgcacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttataaagtgttcatcctttacttttc 1028642  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  1028643 tatccgatgtgggacatataactcacactt 1028672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 523
Target Start/End: Complemental strand, 31509743 - 31509616
Alignment:
Q  397 gagagagacgctacactcttacctaaaatctt-aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgg 495  Q
    ||||||||| ||||| ||||||| |||| | | ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||     
T  31509743 gagagagacactacattcttaccaaaaaacctcaaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtga 31509644  T
Q  496 gacatataactcacacttacacataaca 523  Q
    |||||||||||||||||| |||| ||||    
T  31509643 gacatataactcacacttgcacacaaca 31509616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 36568606 - 36568732
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 496  Q
    ||||||||||| ||||||||||| |||| |||||||||||| ||||| ||||  |||||||||||| ||||||||| |  ||||||||||||||||||||    
T  36568606 gagagagacgccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtggg 36568705  T
Q  497 acatataactcacacttacacataaca 523  Q
    ||||||||||||||||| |||| ||||    
T  36568706 acatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 384 - 524
Target Start/End: Complemental strand, 41632914 - 41632774
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||||||||| ||| || |||||||||| |||| |||||||| |||||||||||  |||||||    
T  41632914 caaccgcacaagcaagagagacaccacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttc 41632815  T
Q  484 tatccgatgtgggacatataactcacacttacacataacac 524  Q
    ||||||||||| ||||||||||| |||||| |||| |||||    
T  41632814 tatccgatgtgagacatataacttacacttgcacacaacac 41632774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 36521920 - 36522051
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||||| ||||||||| |  ||||||||||| |||| |||||||||||  |||||||||| |||||| ||| | ||||||||||||| |||||    
T  36521920 agcaaccacacaaatgagagagatgacacactcttacccaaaaccttaaggcaattggtttatgggtcctctcatttaaagagtgttcaacctcaacttt 36522019  T
Q  482 tctatccgatgtgggacatataactcacactt 513  Q
    |||||| |||||||||||||||||||||||||    
T  36522020 tctatctgatgtgggacatataactcacactt 36522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 36522261 - 36522392
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||| ||||||||||||||||||| | ||||||||||| |||| ||||||  |||| |||||| ||| |||||||||||||| |||||||| |||| |||    
T  36522261 agcagccgcacaagtgagagagacaccacactcttacccaaaaccttaagataatgggtttattggtcctctcacttataaaatgttcaacttccatttt 36522360  T
Q  482 tctatccgatgtgggacatataactcacactt 513  Q
    ||||||| ||||| ||||||||||||||||||    
T  36522361 tctatccaatgtgagacatataactcacactt 36522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 13415786 - 13415925
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||||||||| |||| ||||||| |||  |||||||||| |||| |||||||| |||||||||||  |||  |     
T  13415786 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatt 13415885  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  13415886 tatccgatgtgggacatataactcacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 26074746 - 26074615
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||| |||||||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| |    
T  26074746 agcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactct 26074647  T
Q  482 tctatccgatgtgggacatataactcacactt 513  Q
    | |||||||| ||| |||||||||||||||||    
T  26074646 tttatccgatatggaacatataactcacactt 26074615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 524
Target Start/End: Original strand, 26074170 - 26074312
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||| |||||||||||| | ||||||||||| |||| |||||||||||| ||| |||||| |||| || ||| | |||||||||||  |||||    
T  26074170 agcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttt 26074269  T
Q  482 tctatccgatgtgggacatataactcacacttacacataacac 524  Q
    | ||||||||||| |||||||||||||||||| |||| |||||    
T  26074270 tttatccgatgtgtgacatataactcacacttgcacacaacac 26074312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 518
Target Start/End: Original strand, 40296341 - 40296475
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| || ||||||||| |||||||||| |||| |||||||| |||||||||||   || ||     
T  40296341 caaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattt 40296440  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    |||||||||||||||||||||||||||||| ||||    
T  40296441 tatccgatgtgggacatataactcacacttgcaca 40296475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 9498694 - 9498806
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| ||||||||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||||||| |||||| ||    
T  9498694 agagagacaccacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgaga 9498793  T
Q  498 catataactcaca 510  Q
    |||||||||||||    
T  9498794 catataactcaca 9498806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 383 - 502
Target Start/End: Complemental strand, 31509865 - 31509745
Alignment:
Q  383 gcaaccgcacaagtgagagagacgctacactcttacctaaaatctt-aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||||| ||||||||| | ||| ||||||| |||| | | ||||||||||||||||| || ||||||||||||||||| ||||||||||||||    
T  31509865 gcaaccgtacaagcgagagagacaccacattcttaccaaaaaacctcaaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttt 31509766  T
Q  482 tctatccgatgtgggacatat 502  Q
    ||||||||||||| |||||||    
T  31509765 tctatccgatgtgagacatat 31509745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 18603160 - 18603275
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    ||||||| || ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || |||| |||||||||    
T  18603160 agagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtggga 18603259  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  18603260 catataactcacactt 18603275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 375 - 513
Target Start/End: Complemental strand, 299630 - 299492
Alignment:
Q  375 atgctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 474  Q
    |||||| | |||||| |||||  | |||||||| ||||||||||  |||| |||||||| ||||||||||||||  ||| |||||||| |||||||||||    
T  299630 atgctagaacaaccgtacaagcaatagagacgccacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacct 299531  T
Q  475 ccacttttctatccgatgtgggacatataactcacactt 513  Q
      ||| || ||||||||||||||||||||||||||||||    
T  299530 ttactgttttatccgatgtgggacatataactcacactt 299492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 24489232 - 24489359
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||| | |||||||| ||||||||||  ||||||||||||||||| ||||||||||  ||| ||| |||| ||||| |||||   ||||||    
T  24489232 caaccgcacaagtaaaagagacgccacactcttacgcaaaatcttaaggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttc 24489329  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||||||||||||||||    
T  24489330 tatctgatgtgggacatataactcacactt 24489359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 384 - 506
Target Start/End: Original strand, 34753051 - 34753173
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||||||||  ||||||||||  ||| |||||||| ||||||||| |  |||||||    
T  34753051 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttc 34753150  T
Q  484 tatccgatgtgggacatataact 506  Q
    ||||| |||||||||||||||||    
T  34753151 tatccaatgtgggacatataact 34753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 409 - 513
Target Start/End: Complemental strand, 6224303 - 6224199
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||||| |||||||||||||| |||| |||||||| |||||||||||  ||| || ||||||| |||||||||||||||||    
T  6224303 acactcttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactca 6224204  T
Q  509 cactt 513  Q
    |||||    
T  6224203 cactt 6224199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 513
Target Start/End: Complemental strand, 6500953 - 6500826
Alignment:
Q  385 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 484  Q
    |||||||||||| |||||||| | ||||||||| | |||| ||||||||||||||||||||||| || | | |||||| |||||||||||  ||| || |    
T  6500953 aaccgcacaagtaagagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactatttt 6500854  T
Q  485 atccgatgtgggacatataactcacactt 513  Q
    ||||||||| |||||||||||||||||||    
T  6500853 atccgatgt-ggacatataactcacactt 6500826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 511
Target Start/End: Complemental strand, 38427679 - 38427553
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||||||||||||||||||  ||||||||||  |||| |||||| |||||  || |||||| |||| ||||||||  ||||||||||  |||||||    
T  38427679 caaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctct-acttataagatgttcaacctttacttttc 38427581  T
Q  484 tatccgatgtgggacatataactcacac 511  Q
    ||||| ||||||||||||||||||||||    
T  38427580 tatccaatgtgggacatataactcacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 409 - 516
Target Start/End: Complemental strand, 41170741 - 41170634
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| ||||||||  ||||||||||  ||| || |||||||||||||||||||||||||    
T  41170741 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactca 41170642  T
Q  509 cacttaca 516  Q
    || |||||    
T  41170641 caattaca 41170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 409 - 523
Target Start/End: Original strand, 12662703 - 12662817
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||| |||||  |||||||||| ||| ||||||||| ||||||||||  ||| || |||||||||||||||||||||||||    
T  12662703 acactcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactca 12662802  T
Q  509 cacttacacataaca 523  Q
    ||||| |||| ||||    
T  12662803 cacttgcacacaaca 12662817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 384 - 518
Target Start/End: Complemental strand, 35150138 - 35150005
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||| |||||||||||| | ||||| ||||| |||| |||||| |||||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  35150138 caaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggt-ctcttacttataaggtgttcaaccttgactcttt 35150040  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    |||||||||||||||||||||||||||||| ||||    
T  35150039 tatccgatgtgggacatataactcacacttgcaca 35150005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 624328 - 624199
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||||||||||||| | ||||||||||| |||| || ||||| ||| ||||||||||  ||| |||||||| |||||||||||  ||| ||     
T  624328 caaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattt 624229  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||| | ||||||||||||||||||||||||    
T  624228 tatacaatgtgggacatataactcacactt 624199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 6500582 - 6500454
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||  ||| |||| |||||||| |||||||||||  ||| ||     
T  6500582 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattt 6500483  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    |||||||||| |||||||||||||||||||    
T  6500482 tatccgatgt-ggacatataactcacactt 6500454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 27502062 - 27502191
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||| ||||| ||||||||||||||||  |||||||||| |||| |||||||| ||||| |||||  ||| ||     
T  27502062 caaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttactattt 27502161  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||| ||||||||||||||||||||||||    
T  27502162 tatccaatgtgggacatataactcacactt 27502191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 409 - 513
Target Start/End: Complemental strand, 32487500 - 32487397
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||  |||||||||||  ||| || |||||||||||||||||||||||||    
T  32487500 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttatag-gtgttcaacctttactattttatccgatgtgggacatataactca 32487402  T
Q  509 cactt 513  Q
    |||||    
T  32487401 cactt 32487397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 384 - 504
Target Start/End: Complemental strand, 33747903 - 33747783
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    |||||||| |||  |||||||| | ||||||||| | |||||||||||||||||||||||||| | |||| ||||||||||| || |||||  ||| ||     
T  33747903 caaccgcataaggaagagagacaccacactcttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattt 33747804  T
Q  484 tatccgatgtgggacatataa 504  Q
    |||||||||||||||||||||    
T  33747803 tatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 623950 - 623821
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| |||||||||||||||| | ||||||||||  |||| |||||||| || ||||||||| |   || |||| |||||||||||||||  ||| ||     
T  623950 caaccccacaagtgagagagacaccacactcttactcaaaaccttaaggctataagtttatggctcaacttacttgtaaagtgttcaacctttactatta 623851  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||| ||||||||||||||||||    
T  623850 tatccgatgtgagacatataactcacactt 623821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 382 - 523
Target Start/End: Original strand, 9510544 - 9510685
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    ||||||| ||||||| |||||||| ||| | | ||||||||||| |||||||| |  |||||||| | ||||||||||||||    ||||||||||||||    
T  9510544 agcaaccacacaagtaagagagacactatatttttacctaaaattttaaggcattaggtttatggctcctctcacttataaatgactcaacctccacttt 9510643  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||| | |||||  ||||||||||||||||| |||| ||||    
T  9510644 tctattcaatgtgaaacatataactcacactttcacacaaca 9510685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 398 - 523
Target Start/End: Complemental strand, 25328053 - 25327928
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| ||||||||| |  |||||||||| |||| |||||||| ||||||||| |  ||| || |||||||||| |||    
T  25328053 agagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtagga 25327954  T
Q  498 catataactcacacttacacataaca 523  Q
    ||||||||||||||||| ||| ||||    
T  25327953 catataactcacacttagacacaaca 25327928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 36492243 - 36492372
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  |||||||| | ||||||||| | |||| || |||| |||| |||||| ||| |||| |||||||| |||||||||||  ||| ||     
T  36492243 caaccacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaacctttactcttt 36492342  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  36492343 tatccgatgtgggacatataactcacactt 36492372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 26075201 - 26075317
Alignment:
Q  398 agagagacgctacactctt-acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 496  Q
    |||||||||  |||||||| ||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||| |    
T  26075201 agagagacgacacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgag 26075300  T
Q  497 acatataactcacactt 513  Q
    |||||||| ||||||||    
T  26075301 acatataaatcacactt 26075317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 2411116 - 2411009
Alignment:
Q  407 ctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataact 506  Q
    ||||||||||||  |||| ||||||||||| |||||||||||||||| ||||| ||  |||||||| |  |||| ||||||| |||| ||||||||||||    
T  2411116 ctacactcttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgtaggacatataact 2411017  T
Q  507 cacactta 514  Q
    ||||||||    
T  2411016 cacactta 2411009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 5723817 - 5723946
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||||||||  |||||||| ||| |||||| || |||| |||||| |||| | || ||||||||||| || ||||| ||||||||| |  | | ||     
T  5723817 caaccgcacaagcaagagagacactatactctttcccaaaaccttaagacaataaattaatgggttctcttacatataatgtgttcaacttttattattt 5723916  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||||||||    
T  5723917 tatccgatgtgggacatataactcacactt 5723946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 398 - 523
Target Start/End: Complemental strand, 15370217 - 15370092
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||| ||||||||  ||  ||||||||| |||| ||||||||  ||||||||||  ||| || ||| ||||||||||    
T  15370217 agagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtggga 15370118  T
Q  498 catataactcacacttacacataaca 523  Q
    |||||||||||||||| |||| ||||    
T  15370117 catataactcacacttgcacacaaca 15370092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 26590936 - 26591065
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||| |||||||||||||| ||||||||||  |||| ||||||||| ||| ||||||| | |||| |||||||| |||||||||||  |||||||    
T  26590936 caaccacactagtgagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacctttacttttc 26591035  T
Q  484 tatccgatgtgggacatataactcacactt 513  Q
     || |||| ||| |||| ||| ||||||||    
T  26591036 gattcgatatggaacatttaaatcacactt 26591065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 398 - 518
Target Start/End: Original strand, 3295055 - 3295174
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | |||||| |||| |||| || ||||||||| ||||||||||  ||| |||||||| |||||||||||  ||| || ||||||||||||||    
T  3295055 agagagacaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtggga 3295154  T
Q  498 catataactcacacttacaca 518  Q
    ||||| |||||||||| ||||    
T  3295155 catat-actcacacttgcaca 3295174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 509
Target Start/End: Original strand, 11417028 - 11417128
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||  |||| |||||||||||| |||||||| | |||| |||||||| |||||||||||  ||| || |||||||||||| ||||||||||||    
T  11417028 acactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactca 11417127  T
Q  509 c 509  Q
    |    
T  11417128 c 11417128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 26074821 - 26074937
Alignment:
Q  398 agagagacgctacactctt-acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 496  Q
    |||||||||| |||||||| ||| |||| |||||| ||||  |||||||||| |||  |||||||  |||||||||||  ||| || |||||||||||||    
T  26074821 agagagacgccacactctttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtggg 26074920  T
Q  497 acatataactcacactt 513  Q
    |||||||||||||||||    
T  26074921 acatataactcacactt 26074937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 384 - 523
Target Start/End: Original strand, 3295371 - 3295508
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||| ||||||  ||||||||   ||||||||||| |||| |||||||||||  |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  3295371 caaccacacaagcaagagagacaacacactcttacc-aaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattt 3295469  T
Q  484 tatccgatgtgggacatataactcacacttacacataaca 523  Q
    |||||||||||| |||||| |||||||||| |||| ||||    
T  3295470 tatccgatgtggaacatat-actcacacttccacacaaca 3295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 3622914 - 3623037
Alignment:
Q  383 gcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    |||||| ||| ||||| |||||||  |||||||||||||||| ||||||||||||        | |||| ||||||||| |||||||||| |||||||||    
T  3622914 gcaaccacactagtgacagagacgtcacactcttacctaaaa-cttaaggcaatg--------gattctttcacttatagagtgttcaacttccactttt 3623004  T
Q  483 ctatccgatgtgggacatataactcacacttac 515  Q
    ||||||||| |  ||||||||||||||||||||    
T  3623005 ctatccgatttaagacatataactcacacttac 3623037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 439 - 513
Target Start/End: Complemental strand, 26074395 - 26074321
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||||| |||| |||||||| |||||||| ||  | ||||||||| |||||||||||||||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacactt 26074321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 513
Target Start/End: Original strand, 36527127 - 36527238
Alignment:
Q  390 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 489  Q
    ||||||||||||||||   ||||||||| | ||||||||||||||||| |||||||| | |||||||||            || |||||||||||||| |    
T  36527127 cacaagtgagagagacagcacactcttatccaaaatcttaaggcaatgcgtttatggatcctctcactt------------acgtccacttttctatctg 36527214  T
Q  490 atgtgggacatataactcacactt 513  Q
    ||||||||||||||||||||||||    
T  36527215 atgtgggacatataactcacactt 36527238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 513
Target Start/End: Original strand, 42405638 - 42405751
Alignment:
Q  400 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 499  Q
    |||||| | ||||||||||| |||| ||||||||| |  ||||||| || || | |||| ||| |||||||||||  ||| || |||||||||| |||||    
T  42405638 agagacaccacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggaca 42405737  T
Q  500 tataactcacactt 513  Q
    ||||||||||||||    
T  42405738 tataactcacactt 42405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 487
Target Start/End: Complemental strand, 19275653 - 19275558
Alignment:
Q  391 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 487  Q
    ||||| |||| |||||| ||| ||||||| ||||||||||| |||||| |||||||||  |||  ||||| |||||||||||||| |||||||||||    
T  19275653 acaagcgagacagacgccacaatcttacccaaaatcttaagacaatgaatttatgggtcttcttccttat-aagtgttcaacctctacttttctatc 19275558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 513
Target Start/End: Complemental strand, 42508707 - 42508615
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||||||| ||||||| || |||| |||||| |  |||| |||||  ||||||||||||||||||||| |||||| ||||||||    
T  42508707 aaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacactt 42508615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 29549295 - 29549410
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||||| ||||||||| | |||| ||||||| |||| ||||||||||  ||| |||||||  ||||||| |||  ||| || |||| ||| ||| |    
T  29549295 agagagacgccacactcttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaa 29549394  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  29549395 catataactcacactt 29549410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 513
Target Start/End: Complemental strand, 301069 - 300962
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||||| |||||||||||||||||        | |||||| |||||||| || ||||||||  ||| || |||| |||||||||    
T  301069 agagagacaccacactcttaccaaaaatcttaaggcaatg--------gattctcttacttataaggtattcaacctttactgttttatctgatgtggga 300978  T
Q  498 catataactcacactt 513  Q
    |||||||| |||||||    
T  300977 catataacccacactt 300962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 523
Target Start/End: Original strand, 41635215 - 41635356
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 481  Q
    |||||||  |||||| | |||||  ||||||||||||||||||| ||||| |||||  ||||||| | |||| | |||||| ||||||||| |  ||| |    
T  41635215 agcaaccatacaagtaaaagagatactacactcttacctaaaattttaagacaatggatttatggatcctcttatttataaggtgttcaacatttactct 41635314  T
Q  482 tctatccgatgtgggacatataactcacacttacacataaca 523  Q
    | |||| |||| |  |||||||||||| ||||| ||| ||||    
T  41635315 tttatctgatgggaaacatataactcatacttatacacaaca 41635356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 494
Target Start/End: Original strand, 13786037 - 13786136
Alignment:
Q  394 agtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 493  Q
    ||||||||||||   ||||||||| | ||||||||||| ||||   |||| ||||  ||| |||||||||||||||||||  ||||||| ||||||||||    
T  13786037 agtgagagagacatcacactcttatccaaaatcttaagacaatagatttacgggtcatcttacttataaagtgttcaaccatcactttt-tatccgatgt 13786135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 32446019 - 32445935
Alignment:
Q  382 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtg 466  Q
    |||||||  ||||||||||||||| | ||||| | ||| |||| ||||||||  || |||||||||| ||||||||| |||||||    
T  32446019 agcaacctaacaagtgagagagacaccacactttaacccaaaaccttaaggcgttgggtttatgggtcctctcacttgtaaagtg 32445935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 523
Target Start/End: Complemental strand, 35914910 - 35914842
Alignment:
Q  455 acttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||||||||| ||||||||||  ||| || ||||||||||| ||||||||||||| ||||| ||| ||||    
T  35914910 acttataaaatgttcaacctttactcttttatccgatgtgtgacatataactcatacttatacacaaca 35914842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 513
Target Start/End: Original strand, 10351242 - 10351328
Alignment:
Q  427 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    ||||| ||||||||||||||||  | |||| |||||| |||||||||||| ||||| || || ||||| ||| | ||||| ||||||    
T  10351242 ttaagacaatgagtttatgggtcatttcacgtataaaatgttcaacctccgcttttttagccaatgtgagacttctaacttacactt 10351328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 38427351 - 38427306
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatctta 429  Q
    ||||||||||||  |||||||||| ||||||||||| |||||||||    
T  38427351 caaccgcacaagcaagagagacgccacactcttacccaaaatctta 38427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 432
Target Start/End: Original strand, 795258 - 795306
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaagg 432  Q
    ||||||||||||  |||||||| | |||||||||||||||| |||||||    
T  795258 caaccgcacaagcaagagagacaccacactcttacctaaaaccttaagg 795306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 485
Target Start/End: Complemental strand, 2828117 - 2828085
Alignment:
Q  453 tcacttataaagtgttcaacctccacttttcta 485  Q
    ||||||||||||||| |||||||||||||||||    
T  2828117 tcacttataaagtgtacaacctccacttttcta 2828085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 513
Target Start/End: Complemental strand, 7768925 - 7768853
Alignment:
Q  441 ttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||| || | |||||||| |||||||||||  | | || |||||||||| ||| |||||||||||||||    
T  7768925 ttatgggtccttttacttataaggtgttcaacctttattattttatccgatgtaggatatataactcacactt 7768853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 524
Target Start/End: Original strand, 13785735 - 13785775
Alignment:
Q  484 tatccgatgtgggacatataactcacacttacacataacac 524  Q
    |||||||| ||||||||||||||||||||| |||| |||||    
T  13785735 tatccgatttgggacatataactcacacttccacacaacac 13785775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 34103649 - 34103609
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    |||| |||||||||||||||||||| |||||||| ||||||    
T  34103649 aaaaccttaaggcaatgagtttatgagttctctctcttata 34103609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 41340386 - 41340334
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    ||||||||| | |||||||||||||||||||| |||| |||| ||| ||||||    
T  41340386 acactcttatccaaaatcttaaggcaatgagtgtatgagttccctctcttata 41340334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 41341558 - 41341510
Alignment:
Q  413 tcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 461  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||| ||||||    
T  41341558 tcttaccaaaaaccttaaggcaatgagtgtatgggttccctctcttata 41341510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 513
Target Start/End: Complemental strand, 42524756 - 42524720
Alignment:
Q  477 acttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  42524756 acttttctatccgatgtgagacatataattcacactt 42524720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 398 - 523
Target Start/End: Complemental strand, 5475 - 5350
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | ||||||||| | ||||||||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||||||||||||||| |    
T  5475 agagagacaccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaa 5376  T
Q  498 catataactcacacttacacataaca 523  Q
    |||||||||||||||| |||| ||||    
T  5375 catataactcacacttgcacacaaca 5350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 523
Target Start/End: Complemental strand, 5121 - 4975
Alignment:
Q  377 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 476  Q
    |||| |||||||||| ||| ||||||||| | ||||||||||| |||| | |||||||||||||||||||||  | | ||||||||  | || |||||      
T  5121 gctagagcaaccgcataagcgagagagacaccacactcttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaaccttt 5022  T
Q  477 acttttctatccgatgtgggacatataactcacacttacacataaca 523  Q
    ||| |||| ||||||||| ||||||||| |||||||| |||| ||||    
T  5021 actgttctctccgatgtgagacatataattcacacttgcacacaaca 4975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 409 - 513
Target Start/End: Original strand, 565 - 669
Alignment:
Q  409 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactca 508  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || || ||||||||||||||||||||||    
T  565 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactca 664  T
Q  509 cactt 513  Q
    |||||    
T  665 cactt 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 450 - 513
Target Start/End: Original strand, 234 - 297
Alignment:
Q  450 ctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||| |||||||| |||||||||||  ||| || ||||||||||||||||||||||||||||||    
T  234 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 523
Target Start/End: Complemental strand, 5870 - 5770
Alignment:
Q  423 aatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacataac 522  Q
    ||||||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||| |||||||||||||||||| |||| |||    
T  5870 aatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaac 5771  T
Q  523 a 523  Q
    |    
T  5770 a 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 384 - 523
Target Start/End: Complemental strand, 5529 - 5389
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatctt-aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| ||| ||| ||||  |||||||||  |||| |||||||| |||||||||||  ||| ||    
T  5529 caaccccacaagcaagagagacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactatt 5430  T
Q  483 ctatccgatgtgggacatataactcacacttacacataaca 523  Q
     |||||||||| ||||||||||||||||||| |||| ||||    
T  5429 ttatccgatgtaggacatataactcacacttgcacacaaca 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 451 - 513
Target Start/End: Complemental strand, 39903 - 39841
Alignment:
Q  451 tctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||    
T  39903 tctcacttataaagagtccaaccaccacttttctatccgatgtgggacatataactcacactt 39841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 39588 - 39460
Alignment:
Q  384 caaccgcacaagtgagagagacgcta-cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 482  Q
    ||||| ||||||  |||||||||| | |||| ||||| |||| ||||||||||   |||||| | | ||||||||||||| | |||||||||||||||||    
T  39588 caaccacacaagcaagagagacgccaacacttttacccaaaa-cttaaggcaacatgtttatagttcctctcacttataaggagttcaacctccactttt 39490  T
Q  483 ctatccgatgtgggacatataactcacactt 513  Q
    |||| || |||| ||||||||||||||||||    
T  39489 ctatgcg-tgtgagacatataactcacactt 39460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 513
Target Start/End: Original strand, 1146 - 1261
Alignment:
Q  398 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 497  Q
    |||||||| | | ||||||||| |||| |||||||||||| ||||||| || || |  ||||||| |||||||||||  ||| || ||||| ||||||||    
T  1146 agagagacaccatactcttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtggga 1245  T
Q  498 catataactcacactt 513  Q
    ||||||||||||||||    
T  1246 catataactcacactt 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 469
Target Start/End: Original strand, 1730 - 1802
Alignment:
Q  397 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttc 469  Q
    ||||||||| | ||||||||||| |||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  1730 gagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 511
Target Start/End: Original strand, 3092 - 3138
Alignment:
Q  465 tgttcaacctccacttttctatccgatgtgggacatataactcacac 511  Q
    ||||||||||  ||| || ||||||||||||||||||||||||||||    
T  3092 tgttcaacctttactcttttatccgatgtgggacatataactcacac 3138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 17519 - 17621
Alignment:
Q  421 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacacttacacata 520  Q
    |||| |||||||| ||| |||||||||| |||| ||||| || |||||||||||  ||| || |||| |||||| |||||||||||||||||| |||| |    
T  17519 aaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacaca 17618  T
Q  521 aca 523  Q
    |||    
T  17619 aca 17621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 426 - 485
Target Start/End: Complemental strand, 3168 - 3109
Alignment:
Q  426 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    ||||||||||||||||||| | | ||||||||||||||||||  ||||||||||||||||    
T  3168 cttaaggcaatgagtttattgatgctctcacttataaagtgtataacctccacttttcta 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 518
Target Start/End: Complemental strand, 47492 - 47358
Alignment:
Q  384 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 483  Q
    ||||||| ||||  |||||||| | ||| | ||||| ||||  ||||||||||| |||||||| |||||| |||||||| |||||||| ||  ||| ||     
T  47492 caaccgcgcaagcaagagagacaccacatttttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattt 47393  T
Q  484 tatccgatgtgggacatataactcacacttacaca 518  Q
    |||| |||||| ||||| ||| |||||||| ||||    
T  47392 tatcggatgtgagacatttaattcacacttgcaca 47358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 513
Target Start/End: Original strand, 10192 - 10266
Alignment:
Q  439 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatataactcacactt 513  Q
    |||||||||| |||| |||||||| ||||||||| |  ||  || ||||||||||| ||||||||||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacactt 10266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 485
Target Start/End: Original strand, 10196 - 10255
Alignment:
Q  426 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 485  Q
    ||||||||||||||||||| | | || |||||||||||||||  |||||| |||||||||    
T  10196 cttaaggcaatgagtttattgatgctgtcacttataaagtgtataacctctacttttcta 10255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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