View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19897_low_30 (Length: 299)
Name: NF19897_low_30
Description: NF19897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19897_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 263
Target Start/End: Original strand, 30493955 - 30494205
Alignment:
| Q |
13 |
aaaattataaaaaagaatggaaaacctatgttgtagtttgtatgtccaaattaagaacgattttgtgtcatacattatttatcttcttaatgaaccctaa |
112 |
Q |
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| T |
30493955 |
aaaattataaaaaagaatggaaaacctatgttgtagtttgtatgtccaaattaagaacgattttgtgtcatatattatttatcttcttatcgaaccctaa |
30494054 |
T |
|
| Q |
113 |
atcatcaaagaccctatgtcttaggagccagagggttaacaccggaaagaaagnnnnnnntacagtagttagtaagtgtatacaattctttcacagtggc |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |
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| T |
30494055 |
atcatcaaagaccctatgtcttaggagccagagggttaacaccggaaagaaagaaaaaaatacagtagttagtaagtgtatacaattctttcatagtggc |
30494154 |
T |
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| Q |
213 |
ccaaagttaccaaaagcctattttcagtgaaatactaaatccatataaata |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30494155 |
ccaaagttaccaaaagcctattttcagtgaaatactaaatccatataaata |
30494205 |
T |
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