View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19897_low_35 (Length: 242)
Name: NF19897_low_35
Description: NF19897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19897_low_35 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 35329530 - 35329753
Alignment:
| Q |
19 |
aatcgctgctacctggataacatctttcattgagtactgtccctccaatgctggatccataatctttacaaccttttctctatcagtcaaaagtggcaaa |
118 |
Q |
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| T |
35329530 |
aatcgccgctacctggataacatctttcattgagtactgtccctccaatgctggatccataatctttacaaccttttctctatcagtcaaaagtggcaaa |
35329629 |
T |
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| Q |
119 |
gcctaaacacaaacagtgcatgcaagtttggtaaagaagtgcaagtgatatataggtaataagcttcttgtaagtacaaatactagaatgccgactaatt |
218 |
Q |
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| T |
35329630 |
gcctaaacacaaacagtgcatgcgagtttggtaaagaagtgcaagtgatatataggtaataagcttcttgtaagtacacatactagaatgccaactaatt |
35329729 |
T |
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| Q |
219 |
aagggtgtgtttggattgacttat |
242 |
Q |
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|||||||||||||||||||||||| |
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| T |
35329730 |
aagggtgtgtttggattgacttat |
35329753 |
T |
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