View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19898_high_46 (Length: 259)
Name: NF19898_high_46
Description: NF19898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19898_high_46 |
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Alignment Details
Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 11599293 - 11599468
Alignment:
| Q |
13 |
aatattagttcctaaacttcatattcccagttataatttatgaagatagtgtttgcagacctctctatgcccatgaatgtcaaaatagattccctcaaat |
112 |
Q |
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| T |
11599293 |
aatattagttcctaaacttcatattcccagttataatttatgaagatagtgtttgcagacctctctatgcccatgaatgtcaaaatagattccctcaaat |
11599392 |
T |
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| Q |
113 |
ggattccttttacatttatacttatatttattcatatacattgtacagcataactctcattattgtgttaatcgtc |
188 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
11599393 |
ggattccttttacatttatacttatatttattcatatacattgtacagcataactctcgttattgtgttaatcgtc |
11599468 |
T |
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