View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19898_high_50 (Length: 250)
Name: NF19898_high_50
Description: NF19898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19898_high_50 |
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Alignment Details
Target: chr8 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 44708153 - 44708290
Alignment:
| Q |
16 |
atgaatgacatgtaaaaacatattgagtgtatgtatttgaagaatttctcaacaagcttcgtaaaaaacaagaaaatcacgacatatatagaatacaata |
115 |
Q |
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| T |
44708153 |
atgaatgacatgtaaaaacatattgagtgtatgtatttgaagaatttctcaacaagcttcgtaaaaaacaagaaaatcacgacatatatagaatgcaata |
44708252 |
T |
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| Q |
116 |
ataataactagatccatatttaggaacacgtaaaaatc |
153 |
Q |
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| T |
44708253 |
ataataactagatccatatttaggaacacgtaaaaatc |
44708290 |
T |
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