View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19898_high_58 (Length: 243)
Name: NF19898_high_58
Description: NF19898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19898_high_58 |
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Alignment Details
Target: chr7 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 37631931 - 37631736
Alignment:
| Q |
5 |
agtttccatcttcatcctcttttgagctcaaaagactagggatgaaactttatcatctctatac---tattacttaatgtatatttgcacttagttaaac |
101 |
Q |
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| T |
37631931 |
agtttccatcttcatcctcttttgagctcaaaagactagcgatgaaactttatcatctctatactaatattacttaatgtatatttgcacttagttaaac |
37631832 |
T |
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| Q |
102 |
catctgaagatgaagatatgtaatgttttcagacgtacctaataaatttcaaagagtaaagttaaaaataacttgtttaaaaggagctaaatacactaca |
201 |
Q |
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| T |
37631831 |
catc------tgaagatacgtaatgttttcagacatacctaataaatttcaaagagcaaagtt-aaaacaacttgtttaaaaggagctaaatacactgca |
37631739 |
T |
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