View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19898_high_59 (Length: 241)
Name: NF19898_high_59
Description: NF19898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19898_high_59 |
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Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 49517476 - 49517254
Alignment:
| Q |
1 |
atgtacaagatacatcaatactgcaagttattcgcacacttaagcatgttataaagagagtttgcaactagtcagcttatatgtatgtgcatgacatgga |
100 |
Q |
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| T |
49517476 |
atgtacaagatacatcaatactgcaagttattcgcacacttaagcatgttataaagagagtttgcaactagtcagcttatatgtatgtgcatgacatgga |
49517377 |
T |
|
| Q |
101 |
tatttacagacatagattactgaaggattgattatatttccaatgcaaaaagaaattgcattgaatgataaaacaatgacaaaaggtatgttgcgcacaa |
200 |
Q |
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| T |
49517376 |
tatttacagacatagatcactgaaggattgattatatttccaacgcaaaaaaaaattgcattgaatgataaaacaacgacaaaaggtatgttgcacacaa |
49517277 |
T |
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| Q |
201 |
ggtaagctggttcaggggatatt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
49517276 |
ggtaagctggttcaggggatatt |
49517254 |
T |
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