View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19898_low_21 (Length: 387)

Name: NF19898_low_21
Description: NF19898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19898_low_21
NF19898_low_21
[»] chr3 (20 HSPs)
chr3 (5-369)||(27999827-28000191)
chr3 (123-369)||(28080794-28081040)
chr3 (78-363)||(11409821-11410115)
chr3 (193-369)||(27910978-27911154)
chr3 (121-363)||(27463020-27463262)
chr3 (226-369)||(28049158-28049301)
chr3 (168-330)||(27972753-27972915)
chr3 (154-369)||(28178979-28179194)
chr3 (146-332)||(28471189-28471375)
chr3 (146-332)||(28512235-28512421)
chr3 (193-300)||(17747610-17747714)
chr3 (193-300)||(19048930-19049034)
chr3 (146-234)||(28491328-28491416)
chr3 (168-319)||(26211318-26211469)
chr3 (195-251)||(18029697-18029753)
chr3 (119-161)||(28049081-28049123)
chr3 (186-257)||(27434217-27434288)
chr3 (195-256)||(26134177-26134238)
chr3 (178-226)||(18080186-18080234)
chr3 (275-319)||(26181613-26181657)
[»] scaffold0067 (1 HSPs)
scaffold0067 (197-363)||(24549-24715)
[»] scaffold0043 (1 HSPs)
scaffold0043 (195-255)||(70977-71034)
[»] scaffold0836 (1 HSPs)
scaffold0836 (193-221)||(4860-4888)


Alignment Details
Target: chr3 (Bit Score: 273; Significance: 1e-152; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 5 - 369
Target Start/End: Original strand, 27999827 - 28000191
Alignment:
Q  5 ataacaagtttaatactattttaagtatttaatagctttggttcatctttnnnnnnnnttagaatatataaaagaaaaatgctttgtttgtattttcttg 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||| ||||||||||||||||||    
T  27999827 ataacaagtttaatagtattttaagtatttaatagctttggttcatctttaaaaataattagaatatataaaagaaaaatgatttgtttgtattttcttg 27999926  T
Q  105 aattttatacacgcaaactaagagattatttaacttatatttttatttggattacataattataggaatcagattcatactgtcttcccatatgggaacg 204  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  27999927 aattttatacacgcaaactaacagattatttaacttatatttttatttggattacataattacaggaatcagattcatactgtctacccatatgggaacg 28000026  T
Q  205 tgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattagactgaagaatatttcgaagatgaaatcagtattcatcctatccatt 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||    
T  28000027 tgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattacactgaataatatttcgaagatgaaatcagtattcatcctatctatt 28000126  T
Q  305 gctcgaagaatgttgctggagactttgacaatcagtaagtgtgatgagttgaagcacatcataat 369  Q
    |||| |||||||||| ||||  | |||||||| |||||||||||||| |||||||| || |||||    
T  28000127 gctccaagaatgttgttggaatcattgacaattagtaagtgtgatgaattgaagcatattataat 28000191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 123 - 369
Target Start/End: Original strand, 28080794 - 28081040
Alignment:
Q  123 taagagattatttaacttatatttttatttggattacataattataggaatcagattcatactgtcttcccatatgggaacgtgctcaatgtctttcaat 222  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||    |||  |||||||||||||||||||| |||||||||    
T  28080794 taagagattatttaacttatatttttattttgattacataattacaggaatcaaagtcatatccccttaacatatgggaacgtgctcaatttctttcaat 28080893  T
Q  223 accatcacatatcttgtgcaatattaaagagattagactgaagaatatttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttgctg 322  Q
    ||||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  28080894 accatcaaatatcttgtggaatattaaagagattacactgatgaatatttcgaagatgaaatcagtattcatcctatccattgctccaagaatgttgttg 28080993  T
Q  323 gagactttgacaatcagtaagtgtgatgagttgaagcacatcataat 369  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  28080994 gagactttgacaatcagtaagtgtgatgaattgaagcacattataat 28081040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 78 - 363
Target Start/End: Original strand, 11409821 - 11410115
Alignment:
Q  78 gaaaaatgctttgtttgtattttcttgaattttatacacgcaaactaagagattatttaacttatatttttatttggattacataattataggaatcaga 177  Q
    ||||| || |||||||| ||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| |    
T  11409821 gaaaagtgatttgtttgcattttcttgaattttatacactcatactaagatattatttaacttatatttttatttggattacatagttacaggaatcaaa 11409920  T
Q  178 ttcata----ctgtcttcc-----catatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattagactgaagaat 268  Q
    ||||||    |||  || |     |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  11409921 ttcatattccctggattacataagcatatgggaacgtgctcaatgtcttttaagaccatcagatatcttgtgcaatattaaagagattacactgaggaat 11410020  T
Q  269 atttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttgctggagactttgacaatcagtaagtgtgatgagttgaagcacat 363  Q
    |||| |||||||| ||| |||||||||||||| ||||||| || ||||||| |||| ||||||||||| || || |||||||| || ||||||||    
T  11410021 attttgaagatgagatcggtattcatcctatctattgctccaaaaatgttgttggaaactttgacaattaggaactgtgatgaattaaagcacat 11410115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 193 - 369
Target Start/End: Original strand, 27910978 - 27911154
Alignment:
Q  193 catatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattagactgaagaatatttcgaagatgaaatcagtattc 292  Q
    |||||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27910978 catatgggaacgtgttcaatgtctttcaagacaatcacatatcttatgcaatattaaagagattacactgaagaatatttcgaagatgaaatcagtattc 27911077  T
Q  293 atcctatccattgctcgaagaatgttgctggagactttgacaatcagtaagtgtgatgagttgaagcacatcataat 369  Q
    |||||||| ||||||| | |||||||| |||||||||||||||| ||||||||||| || ||||||||||| |||||    
T  27911078 atcctatcgattgctccaggaatgttgttggagactttgacaattagtaagtgtgacgaattgaagcacattataat 27911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 121 - 363
Target Start/End: Complemental strand, 27463262 - 27463020
Alignment:
Q  121 actaagagattatttaacttatatttttatttggattacataattataggaatcagattcatactgtcttcccatatgggaacgtgctcaatgtctttca 220  Q
    |||||||||||||||||||| |||||| |||||||||||||||||  |||||||| |||| || || |||  ||||||||||||||||||||||||||||    
T  27463262 actaagagattatttaacttctattttcatttggattacataattgcaggaatcaaattcctattgccttaacatatgggaacgtgctcaatgtctttca 27463163  T
Q  221 ataccatcacatatcttgtgcaatattaaagagattagactgaagaatatttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttgc 320  Q
    | || |||||||||| ||| |||||||||||||||||| |||    ||||||| ||||||||||| ||||| |||||||| | ||||| ||||||||||     
T  27463162 agacaatcacatatcctgtacaatattaaagagattaggctgggatatatttcaaagatgaaatctgtatttatcctatctactgctccaagaatgttgt 27463063  T
Q  321 tggagactttgacaatcagtaagtgtgatgagttgaagcacat 363  Q
    ||||||||||    || || || |||||||| |||||||||||    
T  27463062 tggagactttatgtattagcaactgtgatgaattgaagcacat 27463020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 226 - 369
Target Start/End: Original strand, 28049158 - 28049301
Alignment:
Q  226 atcacatatcttgtgcaatattaaagagattagactgaagaatatttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttgctggag 325  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||| |||||    
T  28049158 atcacatatcttgtgcaatattaaagagattacactgaagaatatttcgaagatgaaatcagtattcatcctatctattgcttctagaatgttgttggag 28049257  T
Q  326 actttgacaatcagtaagtgtgatgagttgaagcacatcataat 369  Q
    || |||| ||| || ||||||||||| ||||||||||| |||||    
T  28049258 accttgagaattagcaagtgtgatgaattgaagcacataataat 28049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 168 - 330
Target Start/End: Original strand, 27972753 - 27972915
Alignment:
Q  168 aggaatcagattcatactgtcttcccatatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattagactgaagaa 267  Q
    |||||||| ||||||| |  |||  ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |||   |    
T  27972753 aggaatcaaattcatattcccttaacatatgggaacgtgctcaatgtctttcaagacaatcacatatcttgtgcaatattaaagagattaaattgagaga 27972852  T
Q  268 tatttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttgctggagacttt 330  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||||||| ||||||||||    
T  27972853 tatttcgaagatgaaatccgtattcatcctatctattgctccaagaatgttgttggagacttt 27972915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 154 - 369
Target Start/End: Original strand, 28178979 - 28179194
Alignment:
Q  154 gattacataattataggaatcagattcatactgtcttcccatatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagag 253  Q
    ||||| ||||||  |||||||| |||||||   ||||  |||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| ||    
T  28178979 gattatataattgcaggaatcaaattcatatcctcttaacatatgggaaagtgctcaatgtctttcaagacaatcacatatcttgtgcaatattaaaaag 28179078  T
Q  254 attagactgaagaatatttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttgctggagactttgacaatcagtaagtgtgatgagt 353  Q
    |||| |||   ||| ||||| ||||||||||||||||| ||||| || ||||||| || ||||||| ||||| | |||||||||  ||||||| |||| |    
T  28179079 attacactctggaaaatttcaaagatgaaatcagtatttatcctgtctattgctccaacaatgttgttggagtcattgacaatctataagtgtaatgaat 28179178  T
Q  354 tgaagcacatcataat 369  Q
    |||||||||| |||||    
T  28179179 tgaagcacattataat 28179194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 28471375 - 28471189
Alignment:
Q  146 tttatttggattacataattataggaatcagattcatactgtcttcccatatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaata 245  Q
    ||||||||||||||||||||  |||||||| |||||||    |||  ||||||||||||||||||||||||||||| || |||||||||||||||||||     
T  28471375 tttatttggattacataattgcaggaatcaaattcatatccccttaacatatgggaacgtgctcaatgtctttcaagacaatcacatatcttgtgcaatg 28471276  T
Q  246 ttaaagagattagactgaagaatatttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttgctggagactttga 332  Q
    ||| |||||||| | |||  ||| | || |||||||||||  |||| | |||||| | ||||| |||||||||  |||| |||||||    
T  28471275 ttacagagattacattgagcaatgtctcaaagatgaaatcgttatttaacctatctactgctccaagaatgttattggaaactttga 28471189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 332
Target Start/End: Complemental strand, 28512421 - 28512235
Alignment:
Q  146 tttatttggattacataattataggaatcagattcatactgtcttcccatatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaata 245  Q
    ||||||||||||||||||||  |||||||| |||||||    |||  ||||||||||||||||||||||||||||| || |||||||||||||||||||     
T  28512421 tttatttggattacataattgcaggaatcaaattcatatccccttaacatatgggaacgtgctcaatgtctttcaagacaatcacatatcttgtgcaatg 28512322  T
Q  246 ttaaagagattagactgaagaatatttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttgctggagactttga 332  Q
    ||| |||||||| | |||  ||| | || |||||||||||  |||| | |||||| | ||||| |||||||||  |||| |||||||    
T  28512321 ttacagagattacattgagcaatgtctcaaagatgaaatcgttatttaacctatctactgctccaagaatgttattggaaactttga 28512235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 17747714 - 17747610
Alignment:
Q  193 catatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattagactgaagaatatttcgaagatgaaatcagtattc 292  Q
    ||||||||||||||||||||||||||||| |||| |||   ||||||||||| || ||||||||| | |||||||| |||| ||||||||||| |||||     
T  17747714 catatgggaacgtgctcaatgtctttcaagaccagcac---tcttgtgcaatgttgaagagattacattgaagaatgtttcaaagatgaaatcggtattt 17747618  T
Q  293 atcctatc 300  Q
    ||||||||    
T  17747617 atcctatc 17747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 19049034 - 19048930
Alignment:
Q  193 catatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattagactgaagaatatttcgaagatgaaatcagtattc 292  Q
    ||||||||||||||||||||||||||||| |||| |||   ||||||||||| || ||||||||| | |||||||| |||| ||||||||||| |||||     
T  19049034 catatgggaacgtgctcaatgtctttcaagaccagcac---tcttgtgcaatgttgaagagattacattgaagaatgtttcaaagatgaaatcggtattt 19048938  T
Q  293 atcctatc 300  Q
    ||||||||    
T  19048937 atcctatc 19048930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 234
Target Start/End: Complemental strand, 28491416 - 28491328
Alignment:
Q  146 tttatttggattacataattataggaatcagattcatactgtcttcccatatgggaacgtgctcaatgtctttcaataccatcacatat 234  Q
    ||||||||||||||||||||  |||||||| |||||||    |||  ||||||||||||||||||||||||||||| || |||||||||    
T  28491416 tttatttggattacataattgcaggaatcaaattcatatccccttaacatatgggaacgtgctcaatgtctttcaagacaatcacatat 28491328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 26211469 - 26211318
Alignment:
Q  168 aggaatcagattcatactgtcttcccatatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattagactgaagaa 267  Q
    |||||||| ||||| | || |||  |||||||||||||||||||||||||  || || |||||||||| ||||||||| ||||||||||  | |    ||    
T  26211469 aggaatcaaattcacattgccttgacatatgggaacgtgctcaatgtcttctaagacaatcacatatcctgtgcaatactaaagagattgaaatctgtaa 26211370  T
Q  268 tatttcgaagatgaaatcagtattcatcctatccattgctcgaagaatgttg 319  Q
    | || ||||||| ||||| ||||| |||| ||| ||||||| ||||||||||    
T  26211369 ttttccgaagattaaatctgtatttatccaatctattgctccaagaatgttg 26211318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 18029753 - 18029697
Alignment:
Q  195 tatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaag 251  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  18029753 tatgggaacgtgctcaatgtctttcaagactatcacatatcatgtgcaaaattaaag 18029697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 28049081 - 28049123
Alignment:
Q  119 aaactaagagattatttaacttatatttttatttggattacat 161  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  28049081 aaactaagagattatttaacttatatttttatttggatgacat 28049123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 27434288 - 27434217
Alignment:
Q  186 gtcttcccatatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagatta 257  Q
    |||||| ||||||||||  || || ||||||| |||||| |||| ||| |||||||||| ||||||||||||    
T  27434288 gtcttctcatatgggaatatgttccatgtcttccaatacaatcatatagcttgtgcaatgttaaagagatta 27434217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 26134238 - 26134177
Alignment:
Q  195 tatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagatt 256  Q
    ||||||||||| || ||||| ||| || ||  ||||||||| ||||||||||||||||||||    
T  26134238 tatgggaacgtcctgaatgtgttttaagacagtcacatatcatgtgcaatattaaagagatt 26134177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 18080234 - 18080186
Alignment:
Q  178 ttcatactgtcttcccatatgggaacgtgctcaatgtctttcaatacca 226  Q
    |||||||||||||  ||||||||||| ||||||||| ||||||| ||||    
T  18080234 ttcatactgtcttaacatatgggaacatgctcaatggctttcaagacca 18080186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 26181657 - 26181613
Alignment:
Q  275 aagatgaaatcagtattcatcctatccattgctcgaagaatgttg 319  Q
    ||||||||||| ||||| |||||||||||| ||| ||||||||||    
T  26181657 aagatgaaatctgtattgatcctatccattcctctaagaatgttg 26181613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 363
Target Start/End: Original strand, 24549 - 24715
Alignment:
Q  197 tgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagattagactgaagaatatttcgaagatgaaatcagtattcatcc 296  Q
    |||||||||| |||||||||| |||||| |||| | |   ||||||||||||||||||||  | ||    |||||| |||||| |||||||| || ||||    
T  24549 tgggaacgtgttcaatgtcttccaatacaatcatacagaatgtgcaatattaaagagattgtattgtgtcatattttgaagataaaatcagtgtttatcc 24648  T
Q  297 tatccattgctcgaagaatgttgctggagactttgacaatcagtaagtgtgatgagttgaagcacat 363  Q
    |||| ||| | | || ||||||| |||| ||||||||||| |  || ||||||||||| ||| ||||    
T  24649 tatcaattacaccaaaaatgttgttggaaactttgacaattaagaactgtgatgagttaaagaacat 24715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 71034 - 70977
Alignment:
Q  195 tatgggaacgtgctcaatgtctttcaataccatcacatatcttgtgcaatattaaagagat 255  Q
    |||||||||||||||||||||||||||    |||||||||| |||||||||||||| ||||    
T  71034 tatgggaacgtgctcaatgtctttcaa---aatcacatatcatgtgcaatattaaaaagat 70977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 4888 - 4860
Alignment:
Q  193 catatgggaacgtgctcaatgtctttcaa 221  Q
    |||||||||||||||||||||||||||||    
T  4888 catatgggaacgtgctcaatgtctttcaa 4860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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