View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19898_low_63 (Length: 229)
Name: NF19898_low_63
Description: NF19898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19898_low_63 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 11598971 - 11599179
Alignment:
| Q |
1 |
atcacacttatgtgcaataagttttcatgataaaatgcaagactatgcatgaaatttgaatactgcatctataaggcaatggcatactttgcatagataa |
100 |
Q |
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| T |
11598971 |
atcacacttatgtgcaataagttttcatgataaaatgcaagactatgcatggaatttgaatactgcatctataaggcaatggcatactttgcatagataa |
11599070 |
T |
|
| Q |
101 |
atattagatcatatatacattagcccagggatttcacggaagatatgtttatatgtttaacacacagcagaggtctacaaattataatagtcaacaaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11599071 |
atattagatcatatatacattagcccagggatttcacggaagatatgtttatatgtttaacacacagcagaggtctacaaattataatagtcaacaaaac |
11599170 |
T |
|
| Q |
201 |
atcatgtgc |
209 |
Q |
| |
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||||||||| |
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|
| T |
11599171 |
atcatgtgc |
11599179 |
T |
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