View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19899_low_4 (Length: 428)
Name: NF19899_low_4
Description: NF19899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19899_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 4 - 411
Target Start/End: Complemental strand, 41860087 - 41859680
Alignment:
| Q |
4 |
atgtcgaagaatatcattttcctatcaaagattttaaacatggtggattagaaaaatatattatataaaaagggataagtaattgtctatatttagggag |
103 |
Q |
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| T |
41860087 |
atgtctaagaatatcattttcgtatcaaagattttaaccatggtggattagaaaaatatattatataaaaagggataagtaattgtctatatttagggag |
41859988 |
T |
|
| Q |
104 |
gaaattacttaccaagatgaaaacgttgagatctttatctgagatgttgactgcatcttgattctcatttctttggaactcaagcaagacatccaagaaa |
203 |
Q |
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| T |
41859987 |
gaaattacttaccaagatgaaaacgttgagatctttatctgagatgttgactgcatcttgattctcatttctttggaactcaagcaagacatccaagaaa |
41859888 |
T |
|
| Q |
204 |
tctcttgatttctcatcacgttccacttccaaatccaaacgctctttcacaaacgtggaagcaatttcaatagcttttcccatatccctgtccatttttc |
303 |
Q |
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| T |
41859887 |
tctcttgatttctcatcacgttccacttccaaatccaaacgctctttcacaaacgtggaagcaatttcaatagcttttcccatatccctgtccatttttc |
41859788 |
T |
|
| Q |
304 |
tccttagaccttgtggatccaaccaccttaaccatggaaacaaatccgacacattggcatgtccggtccattccaacaaccccataaccgcagtgaaaaa |
403 |
Q |
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| T |
41859787 |
tccttagaccttgtggatccaaccaccttaaccatggaaacaaatccgacacattggcatgtccggtccattccaacaaccccataaccgcagtgaaaaa |
41859688 |
T |
|
| Q |
404 |
ctcggaac |
411 |
Q |
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| T |
41859687 |
ctcggaac |
41859680 |
T |
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