View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1989_low_7 (Length: 203)

Name: NF1989_low_7
Description: NF1989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1989_low_7
NF1989_low_7
[»] chr2 (46 HSPs)
chr2 (1-152)||(24895406-24895557)
chr2 (152-203)||(346342-346393)
chr2 (152-203)||(39995128-39995179)
chr2 (1-78)||(578245-578322)
chr2 (154-203)||(21737399-21737448)
chr2 (154-203)||(34356699-34356748)
chr2 (150-203)||(37533975-37534028)
chr2 (154-203)||(42674660-42674709)
chr2 (155-203)||(9733846-9733894)
chr2 (151-203)||(14777494-14777546)
chr2 (152-203)||(6171814-6171865)
chr2 (152-203)||(11071628-11071679)
chr2 (3-78)||(28191712-28191787)
chr2 (157-203)||(37192545-37192591)
chr2 (154-203)||(40950858-40950907)
chr2 (152-203)||(2050889-2050940)
chr2 (152-203)||(2521698-2521749)
chr2 (153-203)||(5770108-5770158)
chr2 (151-201)||(40570045-40570095)
chr2 (154-203)||(4559582-4559631)
chr2 (154-203)||(17966006-17966055)
chr2 (154-203)||(20426482-20426531)
chr2 (154-203)||(41729129-41729178)
chr2 (159-203)||(28311701-28311745)
chr2 (159-203)||(37233452-37233496)
chr2 (160-203)||(26310292-26310335)
chr2 (152-203)||(27357960-27358011)
chr2 (156-203)||(41750552-41750599)
chr2 (159-203)||(638616-638660)
chr2 (1-56)||(25954724-25954780)
chr2 (2-77)||(28191475-28191550)
chr2 (152-203)||(13760968-13761019)
chr2 (152-203)||(45409273-45409324)
chr2 (151-201)||(25455049-25455099)
chr2 (1-74)||(35665562-35665635)
chr2 (155-203)||(1988334-1988382)
chr2 (159-203)||(14832833-14832877)
chr2 (153-203)||(14403231-14403281)
chr2 (4-78)||(24895712-24895786)
chr2 (154-203)||(7007596-7007645)
chr2 (1-77)||(12926542-12926619)
chr2 (158-203)||(18713660-18713705)
chr2 (13-78)||(20140857-20140922)
chr2 (109-146)||(37228494-37228531)
chr2 (4-79)||(654007-654083)
chr2 (110-146)||(12989340-12989376)
[»] chr7 (52 HSPs)
chr7 (150-203)||(39554206-39554259)
chr7 (152-203)||(8419586-8419637)
chr7 (153-203)||(27213853-27213903)
chr7 (149-203)||(33378865-33378919)
chr7 (154-203)||(9814217-9814266)
chr7 (154-203)||(11330016-11330065)
chr7 (154-203)||(27248316-27248365)
chr7 (154-203)||(48160590-48160639)
chr7 (154-203)||(48314145-48314194)
chr7 (152-203)||(25924634-25924685)
chr7 (152-203)||(27419221-27419272)
chr7 (156-203)||(43949268-43949315)
chr7 (154-203)||(35488188-35488237)
chr7 (154-203)||(45045649-45045698)
chr7 (158-203)||(48341385-48341430)
chr7 (155-203)||(38544217-38544265)
chr7 (155-203)||(40212912-40212960)
chr7 (156-203)||(45265049-45265096)
chr7 (154-203)||(9946989-9947038)
chr7 (154-203)||(28904185-28904234)
chr7 (159-203)||(38396370-38396414)
chr7 (155-203)||(44566068-44566116)
chr7 (156-203)||(41632365-41632412)
chr7 (156-203)||(45723230-45723277)
chr7 (153-203)||(25098092-25098142)
chr7 (154-203)||(16825353-16825402)
chr7 (30-78)||(18503601-18503649)
chr7 (156-203)||(34930466-34930514)
chr7 (159-203)||(45448965-45449009)
chr7 (1-75)||(26241496-26241570)
chr7 (157-203)||(44820277-44820323)
chr7 (155-201)||(45440933-45440979)
chr7 (154-203)||(11000726-11000775)
chr7 (150-203)||(18824169-18824222)
chr7 (7-56)||(33005115-33005164)
chr7 (154-203)||(41684021-41684070)
chr7 (110-146)||(24539270-24539306)
chr7 (110-146)||(27949422-27949458)
chr7 (109-152)||(11824212-11824255)
chr7 (107-146)||(13919774-13919813)
chr7 (116-146)||(17749844-17749874)
chr7 (116-146)||(24539123-24539153)
chr7 (154-188)||(25045617-25045651)
chr7 (149-183)||(31921742-31921776)
chr7 (13-79)||(33998838-33998904)
chr7 (156-201)||(30685993-30686038)
chr7 (109-146)||(31502474-31502511)
chr7 (33-81)||(15998829-15998877)
chr7 (109-137)||(17354533-17354561)
chr7 (110-146)||(17749691-17749727)
chr7 (157-201)||(37534105-37534149)
chr7 (33-77)||(39187701-39187745)
[»] chr5 (24 HSPs)
chr5 (146-203)||(12970521-12970578)
chr5 (151-203)||(4765556-4765608)
chr5 (152-203)||(555703-555754)
chr5 (154-203)||(19065504-19065553)
chr5 (154-203)||(22935911-22935960)
chr5 (154-203)||(28602578-28602627)
chr5 (151-203)||(29543011-29543063)
chr5 (152-203)||(14206818-14206869)
chr5 (5-79)||(40971873-40971947)
chr5 (159-203)||(6091738-6091782)
chr5 (151-203)||(18412232-18412284)
chr5 (155-203)||(36703897-36703945)
chr5 (157-203)||(32535960-32536006)
chr5 (158-203)||(11855658-11855703)
chr5 (147-203)||(42012171-42012227)
chr5 (156-203)||(6930667-6930714)
chr5 (31-78)||(7630624-7630671)
chr5 (161-203)||(8406917-8406959)
chr5 (157-203)||(26637045-26637091)
chr5 (153-187)||(27481396-27481430)
chr5 (3-76)||(15304606-15304679)
chr5 (21-70)||(41863727-41863776)
chr5 (6-78)||(12542358-12542430)
chr5 (110-146)||(28611773-28611809)
[»] chr3 (34 HSPs)
chr3 (150-203)||(24574598-24574651)
chr3 (151-203)||(8476304-8476356)
chr3 (152-203)||(26849045-26849096)
chr3 (154-203)||(11239119-11239168)
chr3 (154-203)||(40908288-40908337)
chr3 (154-203)||(44952331-44952380)
chr3 (155-203)||(9320448-9320496)
chr3 (150-203)||(6231496-6231549)
chr3 (154-203)||(20297816-20297865)
chr3 (146-203)||(48339748-48339805)
chr3 (151-203)||(20414461-20414513)
chr3 (155-203)||(28124436-28124484)
chr3 (155-203)||(47114857-47114905)
chr3 (3-78)||(16024783-16024858)
chr3 (157-203)||(1099221-1099267)
chr3 (25-78)||(1742003-1742056)
chr3 (154-203)||(43715307-43715356)
chr3 (159-203)||(33217917-33217961)
chr3 (154-203)||(31435922-31435971)
chr3 (1-76)||(25693333-25693408)
chr3 (154-201)||(43132156-43132203)
chr3 (1-56)||(54141608-54141663)
chr3 (153-203)||(45826799-45826849)
chr3 (152-201)||(29512704-29512753)
chr3 (108-146)||(5452055-5452093)
chr3 (2-55)||(9016869-9016922)
chr3 (174-203)||(31611004-31611033)
chr3 (110-146)||(13809079-13809115)
chr3 (21-77)||(18360686-18360742)
chr3 (114-146)||(24734854-24734886)
chr3 (152-200)||(28770207-28770255)
chr3 (25-77)||(40755182-40755234)
chr3 (114-146)||(41451894-41451926)
chr3 (114-146)||(52123955-52123987)
[»] chr1 (45 HSPs)
chr1 (150-203)||(3572560-3572613)
chr1 (150-203)||(5806286-5806339)
chr1 (146-203)||(46666732-46666789)
chr1 (152-203)||(47037481-47037532)
chr1 (154-203)||(2430520-2430569)
chr1 (152-201)||(2632878-2632927)
chr1 (154-203)||(6978794-6978843)
chr1 (154-203)||(9115861-9115910)
chr1 (154-203)||(39329632-39329681)
chr1 (151-203)||(6911517-6911569)
chr1 (155-203)||(39930481-39930529)
chr1 (148-203)||(5518497-5518552)
chr1 (156-203)||(25789787-25789834)
chr1 (153-203)||(35187480-35187530)
chr1 (153-203)||(38964677-38964727)
chr1 (154-203)||(1597341-1597390)
chr1 (154-203)||(8332038-8332087)
chr1 (158-203)||(36361806-36361851)
chr1 (154-203)||(49822916-49822965)
chr1 (158-203)||(51445083-51445128)
chr1 (154-203)||(52630797-52630846)
chr1 (155-203)||(20260086-20260134)
chr1 (151-203)||(32202327-32202379)
chr1 (152-203)||(9831867-9831918)
chr1 (153-203)||(12190175-12190225)
chr1 (155-201)||(14788749-14788795)
chr1 (155-203)||(1007771-1007819)
chr1 (1-51)||(27086017-27086067)
chr1 (157-201)||(32824948-32824992)
chr1 (152-203)||(4683371-4683422)
chr1 (152-203)||(29091690-29091741)
chr1 (31-78)||(33261724-33261771)
chr1 (31-78)||(33281883-33281930)
chr1 (152-203)||(48916019-48916070)
chr1 (30-78)||(5850797-5850844)
chr1 (110-146)||(13114817-13114853)
chr1 (116-146)||(13114670-13114700)
chr1 (152-202)||(50190762-50190812)
chr1 (30-75)||(2058585-2058630)
chr1 (158-203)||(31806759-31806804)
chr1 (154-203)||(52699465-52699514)
chr1 (114-146)||(13889293-13889325)
chr1 (116-152)||(15928696-15928732)
chr1 (110-146)||(41095756-41095792)
chr1 (110-146)||(50773105-50773141)
[»] chr8 (35 HSPs)
chr8 (2-78)||(23757321-23757397)
chr8 (149-203)||(25837934-25837988)
chr8 (154-203)||(1554353-1554402)
chr8 (154-203)||(12710668-12710717)
chr8 (154-203)||(35818423-35818472)
chr8 (154-203)||(38364104-38364153)
chr8 (155-203)||(18726619-18726667)
chr8 (151-203)||(26062167-26062219)
chr8 (152-203)||(32660930-32660981)
chr8 (149-203)||(16313501-16313555)
chr8 (154-203)||(37392545-37392594)
chr8 (154-203)||(38132736-38132785)
chr8 (155-203)||(10896217-10896265)
chr8 (154-202)||(41228713-41228761)
chr8 (152-203)||(26601935-26601986)
chr8 (156-203)||(42755890-42755937)
chr8 (161-203)||(3050032-3050074)
chr8 (159-203)||(7931262-7931306)
chr8 (155-203)||(40197076-40197124)
chr8 (110-148)||(6387560-6387598)
chr8 (5-78)||(22209993-22210066)
chr8 (147-187)||(7317412-7317452)
chr8 (152-196)||(8635664-8635708)
chr8 (155-203)||(18298135-18298183)
chr8 (156-203)||(33444627-33444674)
chr8 (157-203)||(5020492-5020538)
chr8 (2-78)||(15249560-15249636)
chr8 (30-78)||(36128634-36128682)
chr8 (7-78)||(158738-158809)
chr8 (156-201)||(25899657-25899702)
chr8 (154-203)||(35394413-35394462)
chr8 (114-146)||(1961407-1961439)
chr8 (114-146)||(13407322-13407354)
chr8 (114-146)||(16983543-16983575)
chr8 (157-201)||(21137134-21137178)
[»] chr4 (43 HSPs)
chr4 (151-203)||(40435927-40435979)
chr4 (152-203)||(6279918-6279969)
chr4 (152-203)||(23686814-23686865)
chr4 (140-203)||(35999713-35999776)
chr4 (152-203)||(39835304-39835355)
chr4 (152-203)||(48879352-48879403)
chr4 (150-203)||(27762894-27762947)
chr4 (154-203)||(45747795-45747844)
chr4 (154-203)||(55967999-55968048)
chr4 (152-203)||(25916032-25916083)
chr4 (154-203)||(936153-936202)
chr4 (154-203)||(27555437-27555486)
chr4 (154-203)||(39498852-39498901)
chr4 (154-203)||(39502191-39502240)
chr4 (154-203)||(39730292-39730341)
chr4 (1-78)||(41823573-41823650)
chr4 (154-203)||(41859046-41859095)
chr4 (155-203)||(34049597-34049645)
chr4 (159-203)||(34237424-34237468)
chr4 (155-203)||(48518891-48518939)
chr4 (154-201)||(18405233-18405280)
chr4 (154-203)||(25932468-25932517)
chr4 (150-203)||(30415929-30415982)
chr4 (154-203)||(42773975-42774024)
chr4 (154-203)||(43723291-43723340)
chr4 (155-203)||(13229989-13230037)
chr4 (159-203)||(27942770-27942814)
chr4 (151-203)||(41744216-41744268)
chr4 (156-203)||(47670389-47670436)
chr4 (157-203)||(18931780-18931826)
chr4 (2-52)||(41609088-41609138)
chr4 (25-78)||(17947287-17947340)
chr4 (154-203)||(45596295-45596344)
chr4 (155-203)||(32953550-32953598)
chr4 (167-203)||(8322272-8322308)
chr4 (108-146)||(8109105-8109143)
chr4 (7-81)||(33413856-33413930)
chr4 (150-203)||(50672903-50672953)
chr4 (34-79)||(36620948-36620993)
chr4 (109-146)||(37315559-37315596)
chr4 (110-146)||(24834575-24834611)
chr4 (37-77)||(29175622-29175662)
chr4 (110-146)||(39016813-39016849)
[»] chr6 (15 HSPs)
chr6 (152-203)||(2657723-2657774)
chr6 (152-203)||(7053567-7053618)
chr6 (152-203)||(8029356-8029407)
chr6 (155-203)||(1317041-1317089)
chr6 (154-203)||(14171036-14171085)
chr6 (13-78)||(4096756-4096821)
chr6 (142-202)||(6705752-6705812)
chr6 (158-199)||(18897948-18897989)
chr6 (1-77)||(3014519-3014595)
chr6 (155-191)||(10246222-10246258)
chr6 (4-76)||(1111999-1112069)
chr6 (150-203)||(3869528-3869581)
chr6 (162-203)||(16968948-16968989)
chr6 (102-146)||(35128870-35128914)
chr6 (150-203)||(7344078-7344131)
[»] scaffold0006 (1 HSPs)
scaffold0006 (145-203)||(201948-202006)
[»] scaffold0939 (1 HSPs)
scaffold0939 (2-78)||(684-760)
[»] scaffold0189 (1 HSPs)
scaffold0189 (160-203)||(28957-29000)


Alignment Details
Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 24895557 - 24895406
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaatttactgtgtaattacaaggaataa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  24895557 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtaaggattaaagtcaaaatttattgtgtaattacaaggaataa 24895458  T
Q  101 aaacttattgagaaatgctagcaacactctcttttggacactctctaatact 152  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24895457 aaacttattgagaaatgctagcaacactctcttttggacagtctctaatact 24895406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 346342 - 346393
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  346342 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 346393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 39995128 - 39995179
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39995128 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 39995179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 578322 - 578245
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    ||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| || ||| ||||||||||||||    
T  578322 gggaccaaaactaaaacaaaaaaatttgtcgggatgaaaacatctcattttattttttagggactaaaatcaaaattt 578245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 21737399 - 21737448
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21737399 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 21737448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 34356699 - 34356748
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34356699 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 34356748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 37534028 - 37533975
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37534028 actaagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatga 37533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 42674660 - 42674709
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42674660 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 42674709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 9733846 - 9733894
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9733846 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 9733894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 14777494 - 14777546
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14777494 ctaagggtgtgtttgtttcaatttataattgttgattcccgggaataaaatga 14777546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 6171865 - 6171814
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6171865 taagggtgtgtttgtttcaagttataattgttgattcccgagaataaaatga 6171814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 11071679 - 11071628
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11071679 taagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatga 11071628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 28191712 - 28191787
Alignment:
Q  3 gaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    ||||||||  ||||||| ||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  28191712 gaccaaaaacaaaacaaaaaattttgtgaggatgaaaacatctcattttattttgtaaagattaaaatcaaaattt 28191787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 37192591 - 37192545
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37192591 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 37192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 40950858 - 40950907
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40950858 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 40950907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 2050940 - 2050889
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  2050940 taagtgtgtgtttgtttcaagttataattgttgattcccgagaataaaatga 2050889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 2521749 - 2521698
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  2521749 taagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatga 2521698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 5770108 - 5770158
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  5770108 aagggtatgtttgtttcaagttataattgttgattcctgggaataaaatga 5770158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 40570095 - 40570045
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  40570095 ctaagggtgtgtttgtttcaagttataattgtagattcctgggaataaaat 40570045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 4559631 - 4559582
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  4559631 agggtgtgtttgtttcaagttataattgttgattcccaagaataaaatga 4559582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 17966055 - 17966006
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  17966055 agggtgtgtttgtttcaagttataattgttgattcccgataataaaatga 17966006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 20426482 - 20426531
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  20426482 agggtgtgtttgtttcaaattatatttgttgattcccgggaataaaatga 20426531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 41729129 - 41729178
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||    
T  41729129 agggtgtgtttgtttcaagttataattttttattcccgggaataaaatga 41729178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 28311701 - 28311745
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatga 28311745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 37233496 - 37233452
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  37233496 gtgtttgtttcaagttatatttgttgattcccgggaataaaatga 37233452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 26310335 - 26310292
Alignment:
Q  160 tgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  26310335 tgtttgtttaaagttataattgttgattcccgggaataaaatga 26310292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 27357960 - 27358011
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||| |||||||||||| || |||||||||    
T  27357960 taagggtgtgtttgtttcaagttatatttgttgattcccaggtataaaatga 27358011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 41750599 - 41750552
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  41750599 ggtgtgtttgtttcaagttataattgttgattcctaggaataaaatga 41750552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 638660 - 638616
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  638660 gtgtttgtttcaagttataattgttgatttccggaaataaaatga 638616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25954724 - 25954780
Alignment:
Q  1 gggaccaaaactaaaa-caataaaatttgcgaggatgaaaacatctcattttatttt 56  Q
    |||||||||| ||||| ||| |||||||| |||||||||||||||||||||||||||    
T  25954724 gggaccaaaaataaaaacaaaaaaatttgtgaggatgaaaacatctcattttatttt 25954780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 28191550 - 28191475
Alignment:
Q  2 ggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctca-ttttattttgtacggattaaaatcaaaatt 77  Q
    ||||||||| ||||| || |||||||| |||||||||||||| ||| ||| |||||||||||| |||||||||||||    
T  28191550 ggaccaaaaataaaataaaaaaatttgtgaggatgaaaacat-tcagtttaattttgtacggactaaaatcaaaatt 28191475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 13761019 - 13760968
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||| ||||||||||||||||||||||| ||||||  ||||||||||||||    
T  13761019 taaggatgtgtttgtttcaagttataattattgattttcgggaataaaatga 13760968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 45409324 - 45409273
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||| ||||||||||||  | |||||||||    
T  45409324 taagggtgtgtttgtttcaagttatatttgttgattcccaagtataaaatga 45409273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 25455099 - 25455049
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    ||||||||||||||||||||||||||| |||| |||||| | |||||||||    
T  25455099 ctaagggtgtgtttgtttcaagttatatttgtagattcctgagaataaaat 25455049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35665562 - 35665635
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaa 74  Q
    |||||||||  |||||||| ||  |||| ||||||||||||||||||||||| ||| || ||| ||||||||||    
T  35665562 gggaccaaatataaaacaaaaatttttgtgaggatgaaaacatctcattttagtttttagggactaaaatcaaa 35665635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 1988382 - 1988334
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||| |||||||| ||||||||| | |||||||||||||    
T  1988382 gggtgtgtttgtttgaagttatatttgttgatttctgggaataaaatga 1988334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 14832877 - 14832833
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||    
T  14832877 gtgtttgtttcaagttatatttgttgattcctaggaataaaatga 14832833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 14403231 - 14403281
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||| ||||| || ||||||||||| || ||||||||||    
T  14403231 aagggtgtgtttgtttgaagttgtatttgttgattcctggaaataaaatga 14403281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 24895712 - 24895786
Alignment:
Q  4 accaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||  |||| || ||| |||||||| ||||||||||   ||||||||||||| ||| ||||||||||||||    
T  24895712 accaaaaacaaaataaaaaattttgcgagaatgaaaacattcaattttattttgtagggactaaaatcaaaattt 24895786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 7007645 - 7007596
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||| |||||||||||| ||||||||||  ||| |||||||||    
T  7007645 agggtgtgtttatttcaagttatatttgttgattcttggggataaaatga 7007596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12926619 - 12926542
Alignment:
Q  1 gggaccaaaactaaaacaat-aaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaatt 77  Q
    |||||||||| ||||||||  |||| ||| ||||||||||||| |||||||||||||  | |||  ||||||||||||    
T  12926619 gggaccaaaaataaaacaaacaaaaattgtgaggatgaaaacaactcattttatttttcagggacgaaaatcaaaatt 12926542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 18713660 - 18713705
Alignment:
Q  158 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||| ||||||||||  || ||||||||||    
T  18713660 tgtgtttgtttcaagttatatttgttgattcatggtaataaaatga 18713705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 20140922 - 20140857
Alignment:
Q  13 aaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    ||||||| |||||||| ||||||||||| | ||| ||||||||| || ||| |||||| |||||||    
T  20140922 aaaacaaaaaaatttgtgaggatgaaaatacctcgttttattttataaggactaaaattaaaattt 20140857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 37228494 - 37228531
Alignment:
Q  109 tgagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  37228494 tgagaaatgctagcaacactctcttttgagcactctct 37228531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 654083 - 654007
Alignment:
Q  4 accaaaactaaaacaataaaattt-gcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattta 79  Q
    ||||||| |||||||| ||||||| | |||||||||||||||| |||||| ||| || ||| |||| ||||| ||||    
T  654083 accaaaaataaaacaaaaaaattttgtgaggatgaaaacatctgattttaatttttagggaataaagtcaaatttta 654007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 12989376 - 12989340
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  12989376 gagaagtgctagcaacactctcttttgaacactctct 12989340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 3e-22; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 39554259 - 39554206
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39554259 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 39554206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 8419586 - 8419637
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8419586 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 8419637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 27213853 - 27213903
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27213853 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 27213903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 33378919 - 33378865
Alignment:
Q  149 tactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33378919 tacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 33378865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 9814217 - 9814266
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9814217 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 9814266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 11330065 - 11330016
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11330065 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 11330016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 27248365 - 27248316
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27248365 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 27248316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 48160590 - 48160639
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48160590 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 48160639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 48314194 - 48314145
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48314194 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 48314145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 25924634 - 25924685
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25924634 taagggtatgtttgtttcaagttataattgttgattcccgggaataaaatga 25924685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 27419221 - 27419272
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27419221 taagggtgtgtttgtttcaagttataattgctgattcccgggaataaaatga 27419272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 43949315 - 43949268
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43949315 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 43949268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 35488188 - 35488237
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35488188 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatga 35488237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 45045698 - 45045649
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45045698 agggtgtgtttgttttaagttataattgttgattcccgggaataaaatga 45045649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 48341430 - 48341385
Alignment:
Q  158 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  48341430 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 48341385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 38544265 - 38544217
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38544265 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatga 38544217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 40212960 - 40212912
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40212960 gggtgtgtttgtttcaagttataattgttgattcgcgggaataaaatga 40212912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 45265049 - 45265096
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45265049 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 45265096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 9946989 - 9947038
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  9946989 agggtgtgtttgtttaaagttataatttttgattcccgggaataaaatga 9947038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 28904185 - 28904234
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  28904185 agggtgtgtttgttttaagttataattgttgattcccgagaataaaatga 28904234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 38396370 - 38396414
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  38396370 gtgtttgttccaagttataattgttgattcccgggaataaaatga 38396414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 44566116 - 44566068
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  44566116 gggtgtgtttgtttcaagttataattgttgatttccggaaataaaatga 44566068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 41632365 - 41632412
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||    
T  41632365 ggtgtgtttgtttcaagttataattgttgattcctgagaataaaatga 41632412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 45723277 - 45723230
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||    
T  45723277 ggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatga 45723230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 25098142 - 25098092
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  25098142 aagggtgtgtttgtttcaagttataatttttgattttcgggaataaaatga 25098092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 16825353 - 16825402
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  16825353 agggtgtgtttgtttcaagttataattgttaattcctaggaataaaatga 16825402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 18503649 - 18503601
Alignment:
Q  30 gaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    ||||||||||||||||||||||||||| || |||| |||||||||||||    
T  18503649 gaggatgaaaacatctcattttattttttagggataaaaatcaaaattt 18503601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 34930466 - 34930514
Alignment:
Q  156 ggtgtgtttgtttcaa-gttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  34930466 ggtgtgtttgtttcaaagttataattgttgattcctgggaataaaatga 34930514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 45449009 - 45448965
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  45449009 gtgtttgtttcaagttataatttttgattctcgggaataaaatga 45448965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26241496 - 26241570
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaa 75  Q
    |||| ||||| |||||||| |||  ||  ||||||||||||||||||||||||||| || |||||||||| ||||    
T  26241496 gggatcaaaaataaaacaaaaaatattttgaggatgaaaacatctcattttattttttagggattaaaataaaaa 26241570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 44820323 - 44820277
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||    
T  44820323 gtgtgtttgtttcaagttataattgttgattttcaggaataaaatga 44820277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 45440979 - 45440933
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||    
T  45440979 gggtgtgtttgtttcaagttataattgtagattcttgggaataaaat 45440933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 11000775 - 11000726
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||  |||||||||| || ||||||||||    
T  11000775 agggtgtgtttgtttcaagttatatatgttgattcctggaaataaaatga 11000726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 18824222 - 18824169
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||| || |||||||||   |||||||||||||    
T  18824222 actaagggtgtgtttgtttcaagttgtatttgttgatttttgggaataaaatga 18824169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 33005115 - 33005164
Alignment:
Q  7 aaaactaaaacaataaaatttgcgaggatgaaaacatctcattttatttt 56  Q
    |||| |||||||| |||||||| |||||||||||| ||||||||||||||    
T  33005115 aaaaataaaacaaaaaaatttgtgaggatgaaaacttctcattttatttt 33005164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 41684021 - 41684070
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||| ||||||||||| | |||||| ||||    
T  41684021 agggtgtgtttgtttcaagttatatttgttgattcctgagaataatatga 41684070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 24539306 - 24539270
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24539306 gagaaatgctagcgacactctcttttggacactctct 24539270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 27949458 - 27949422
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||||||| |||||||||    
T  27949458 gagaaatgctagcaacactctcttttgaacactctct 27949422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 11824255 - 11824212
Alignment:
Q  109 tgagaaatgctagcaacactctcttttggacactctctaatact 152  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||    
T  11824255 tgagtaatgctaacaacactctcttttgaacactctctaatact 11824212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 13919774 - 13919813
Alignment:
Q  107 attgagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  13919774 attgagaaatgctagcaacactctcttttgagcactctct 13919813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 146
Target Start/End: Complemental strand, 17749874 - 17749844
Alignment:
Q  116 tgctagcaacactctcttttggacactctct 146  Q
    |||||||||||||||||||||||||||||||    
T  17749874 tgctagcaacactctcttttggacactctct 17749844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 146
Target Start/End: Original strand, 24539123 - 24539153
Alignment:
Q  116 tgctagcaacactctcttttggacactctct 146  Q
    |||||||||||||||||||||||||||||||    
T  24539123 tgctagcaacactctcttttggacactctct 24539153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 25045617 - 25045651
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattc 188  Q
    |||||||||||||||||||||||| ||||||||||    
T  25045617 agggtgtgtttgtttcaagttatatttgttgattc 25045651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 31921742 - 31921776
Alignment:
Q  149 tactaagggtgtgtttgtttcaagttataattgtt 183  Q
    ||||||||||||||||||||||||||||| |||||    
T  31921742 tactaagggtgtgtttgtttcaagttatatttgtt 31921776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 33998838 - 33998904
Alignment:
Q  13 aaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattta 79  Q
    ||||||| ||||| |  |||||| |||| ||||||||||||||| || ||| |||||||||||||||    
T  33998838 aaaacaaaaaaatgtatgaggataaaaatatctcattttattttttagggactaaaatcaaaattta 33998904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 30685993 - 30686038
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||    
T  30685993 ggtgtgtttgtttcaagttataattgtagattcgttggaataaaat 30686038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 31502474 - 31502511
Alignment:
Q  109 tgagaaatgctagcaacactctcttttggacactctct 146  Q
    |||||||||||||||||||||||||||  |||||||||    
T  31502474 tgagaaatgctagcaacactctcttttaaacactctct 31502511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 15998877 - 15998829
Alignment:
Q  33 gatgaaaacatctcattttattttgtacggattaaaatcaaaatttact 81  Q
    |||||||||||| | ||||||||| || ||| |||||||||||||||||    
T  15998877 gatgaaaacatcacgttttattttttagggactaaaatcaaaatttact 15998829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 137
Target Start/End: Original strand, 17354533 - 17354561
Alignment:
Q  109 tgagaaatgctagcaacactctcttttgg 137  Q
    |||||||||||||||||||||||||||||    
T  17354533 tgagaaatgctagcaacactctcttttgg 17354561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 17749691 - 17749727
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  17749691 gagaaatgctagcgacactcttttttggacactctct 17749727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 37534105 - 37534149
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    |||||||||||||| ||||||||||| |||||| || ||||||||    
T  37534105 gtgtgtttgtttcatgttataattgtagattcctggaaataaaat 37534149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 39187701 - 39187745
Alignment:
Q  33 gatgaaaacatctcattttattttgtacggattaaaatcaaaatt 77  Q
    |||||||||||||||||||||||| ||  || |||||||||||||    
T  39187701 gatgaaaacatctcattttattttctaaagactaaaatcaaaatt 39187745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 3e-22; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 12970521 - 12970578
Alignment:
Q  146 taatactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12970521 taatattaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 12970578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 4765556 - 4765608
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4765556 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 4765608  T

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Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 555703 - 555754
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  555703 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 555754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 19065504 - 19065553
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19065504 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 19065553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 22935911 - 22935960
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22935911 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 22935960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 28602627 - 28602578
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28602627 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 28602578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 29543011 - 29543063
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29543011 ctaagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatga 29543063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 14206818 - 14206869
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14206818 taagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatga 14206869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 40971947 - 40971873
Alignment:
Q  5 ccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattta 79  Q
    |||||||||||| || |||| ||| ||||||||||||||||||||||||||| || ||| |||||||||||||||    
T  40971947 ccaaaactaaaataaaaaaaattgagaggatgaaaacatctcattttattttttagggactaaaatcaaaattta 40971873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 6091782 - 6091738
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6091782 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 6091738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 18412284 - 18412232
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  18412284 ctaagggtgtgtttgtttcaagttataattattgattcctgggaataaaatga 18412232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 36703945 - 36703897
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  36703945 gggtgtgtttgtttcaagttataattgttgattatcgggaataaaatga 36703897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 32536006 - 32535960
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  32536006 gtgtgtttgttttaagttataattgttgattcccaggaataaaatga 32535960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 11855658 - 11855703
Alignment:
Q  158 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||| | |||||||||||    
T  11855658 tgtgtttgtttcaagttataattgttgattcctgagaataaaatga 11855703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 42012171 - 42012227
Alignment:
Q  147 aatactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||| ||||||||||||||| ||| |||| |||||||||| ||||||||||||||    
T  42012171 aatacttagggtgtgtttgtttgaagctatatttgttgattctcgggaataaaatga 42012227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 6930714 - 6930667
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||| |||||||||||| ||||||||||| | |||||||||||    
T  6930714 ggtgtgtttatttcaagttatatttgttgattcctgagaataaaatga 6930667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 7630624 - 7630671
Alignment:
Q  31 aggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||||||||||| ||||||||| || ||| ||||||||||||||    
T  7630624 aggatgaaaacatctctttttattttttagggactaaaatcaaaattt 7630671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 8406959 - 8406917
Alignment:
Q  161 gtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||  || |||||||||||    
T  8406959 gtttgtttcaagttataattgttgattttcgagaataaaatga 8406917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 26637045 - 26637091
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||| |||||||||   |||||||||||||    
T  26637045 gtgtgtttgtttcaagttatatttgttgattaatgggaataaaatga 26637091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 27481430 - 27481396
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgatt 187  Q
    |||||||||||||||||||||||||||| ||||||    
T  27481430 aagggtgtgtttgtttcaagttataatttttgatt 27481396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 15304606 - 15304679
Alignment:
Q  3 gaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaat 76  Q
    ||||||||  ||||||| ||| |||| || ||| |||||||||||||||||||| || ||| ||||| ||||||    
T  15304606 gaccaaaaagaaaacaaaaaattttgtgaagataaaaacatctcattttattttttaaggactaaaagcaaaat 15304679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 41863727 - 41863776
Alignment:
Q  21 aaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaat 70  Q
    |||| ||| ||||||||||||||||||||||||||| ||  |||||||||    
T  41863727 aaaaattgtgaggatgaaaacatctcattttattttatagagattaaaat 41863776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 12542358 - 12542430
Alignment:
Q  6 caaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||||||||| |||||||   | || |||||||| ||||||||||||||| | | ||||||| ||||||    
T  12542358 caaaactaaaacaaaaaaatttaaaatgacgaaaacatttcattttattttgtaggaactaaaatccaaattt 12542430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 28611773 - 28611809
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    |||||||||||||||||||||||||||  ||||||||    
T  28611773 gagaaatgctagcaacactctcttttgagcactctct 28611809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 3e-22; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 24574651 - 24574598
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24574651 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 24574598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 8476304 - 8476356
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8476304 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 8476356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 26849096 - 26849045
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26849096 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 26849045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 11239119 - 11239168
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11239119 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 11239168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 40908337 - 40908288
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40908337 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 40908288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 44952380 - 44952331
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44952380 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 44952331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 9320448 - 9320496
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9320448 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 9320496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 6231496 - 6231549
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6231496 actaggggtgtgtttgtttcaagttataattgttgattcccgagaataaaatga 6231549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 20297865 - 20297816
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20297865 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatga 20297816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 48339748 - 48339805
Alignment:
Q  146 taatactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  48339748 taatacttaggatgtgtttgtttcaagttataattgttgatttccgggaataaaatga 48339805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 20414461 - 20414513
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  20414461 ctaagggtgtgtttgtttcaagttataattgttgatttctgggaataaaatga 20414513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 28124436 - 28124484
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28124436 gggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 28124484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 47114857 - 47114905
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47114857 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatga 47114905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 16024783 - 16024858
Alignment:
Q  3 gaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||| ||||| || ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  16024783 gaccaaaaataaaataaaaaaatatgtgaggatgaaaacatctcattttattttttagggactaaaatcaaaattt 16024858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 1099267 - 1099221
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  1099267 gtgtgtttgttttaagttataattgttgattcccgggaataaaatga 1099221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 1742056 - 1742003
Alignment:
Q  25 tttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  1742056 tttgtgaggatgaaaacatctcattttattttttagggattaaaatcaaaattt 1742003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 43715307 - 43715356
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  43715307 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatga 43715356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 33217917 - 33217961
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  33217917 gtgtttgtttcaagttataattgttgatttccgggaataaaatga 33217961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 31435922 - 31435971
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||    
T  31435922 agggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatga 31435971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25693408 - 25693333
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaat 76  Q
    ||||||||||  ||||||| |||||||| ||||||||||||| ||| ||||||||| || |||  |||||||||||    
T  25693408 gggaccaaaaacaaaacaacaaaatttgtgaggatgaaaacacctcgttttattttataaggaccaaaatcaaaat 25693333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 43132156 - 43132203
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||    
T  43132156 agggtgtgtttgtttcaagttatatttgttgattctcgagaataaaat 43132203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 54141608 - 54141663
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttatttt 56  Q
    ||||||||||  ||||||| ||| |||| |||||||||||||||||||||||||||    
T  54141608 gggaccaaaaacaaaacaaaaaattttgtgaggatgaaaacatctcattttatttt 54141663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 45826849 - 45826799
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||||    
T  45826849 aagggtgtgtttgtttcaagttatcgttgtagattccagggaataaaatga 45826799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 29512753 - 29512704
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    ||||||||||||||||||||||||||||| || ||| | |||||||||||    
T  29512753 taagggtgtgtttgtttcaagttataatttttaatttctgggaataaaat 29512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 5452055 - 5452093
Alignment:
Q  108 ttgagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  5452055 ttgagtaatgctagcaacactctcttttgaacactctct 5452093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 9016869 - 9016922
Alignment:
Q  2 ggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattt 55  Q
    |||| |||| |||||||| |||| ||| |||||||||||||| |||||||||||    
T  9016869 ggacaaaaaataaaacaaaaaaaattgtgaggatgaaaacatttcattttattt 9016922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 203
Target Start/End: Original strand, 31611004 - 31611033
Alignment:
Q  174 tataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||    
T  31611004 tataattgttgattcccgggaataaaatga 31611033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 13809079 - 13809115
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||||||  |||||||||    
T  13809079 gagaaatgctagcaacactctcttttacacactctct 13809115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 18360742 - 18360686
Alignment:
Q  21 aaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaatt 77  Q
    |||||||| |||||| |||||||||||||||  ||| |  |||||||||||||||||    
T  18360742 aaaatttgagaggataaaaacatctcatttttattttttgggattaaaatcaaaatt 18360686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 24734886 - 24734854
Alignment:
Q  114 aatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||| |||||||||    
T  24734886 aatgctagcaacactctcttttgaacactctct 24734854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 28770207 - 28770255
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaa 200  Q
    ||||||||||||| |||||||||||| | || |||||| ||||||||||    
T  28770207 taagggtgtgtttctttcaagttatattcgtagattcctgggaataaaa 28770255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 40755182 - 40755234
Alignment:
Q  25 tttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaatt 77  Q
    ||||||||| |||||||||||||||||||    || |||||||||||||||||    
T  40755182 tttgcgagggtgaaaacatctcattttatacactagggattaaaatcaaaatt 40755234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 41451894 - 41451926
Alignment:
Q  114 aatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||| |||||||||    
T  41451894 aatgctagcaacactctcttttgaacactctct 41451926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 52123955 - 52123987
Alignment:
Q  114 aatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||| |||||||||    
T  52123955 aatgctagcaacactctcttttgaacactctct 52123987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 3e-22; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 3572560 - 3572613
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3572560 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 3572613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 5806286 - 5806339
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5806286 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 5806339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 46666789 - 46666732
Alignment:
Q  146 taatactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46666789 taataataagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 46666732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 47037532 - 47037481
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47037532 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 47037481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 2430569 - 2430520
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2430569 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 2430520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 2632927 - 2632878
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2632927 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 2632878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 6978843 - 6978794
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6978843 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 6978794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 9115910 - 9115861
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9115910 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 9115861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 39329681 - 39329632
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39329681 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 39329632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 6911569 - 6911517
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6911569 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 6911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 39930529 - 39930481
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39930529 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 39930481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 5518497 - 5518552
Alignment:
Q  148 atactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  5518497 atactaagggtgtgtttgtttcaagttatatttgttgattcccaggaataaaatga 5518552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 25789834 - 25789787
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25789834 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 25789787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 35187530 - 35187480
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35187530 aagggtgtgtttttttcaagttataattgttgattcccgggaataaaatga 35187480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 38964677 - 38964727
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38964677 aagggggtgtttgtttcaagttataattgttgattcccgggaataaaatga 38964727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 1597341 - 1597390
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1597341 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatga 1597390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 8332087 - 8332038
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8332087 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatga 8332038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 36361851 - 36361806
Alignment:
Q  158 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  36361851 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 36361806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 49822916 - 49822965
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49822916 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 49822965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 51445083 - 51445128
Alignment:
Q  158 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  51445083 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 51445128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 52630846 - 52630797
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  52630846 agggtgtgtttgtttcaagttataattgttgattcctgggaataaaatga 52630797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 20260086 - 20260134
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20260086 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatga 20260134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 32202327 - 32202379
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  32202327 ctaagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatga 32202379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 9831867 - 9831918
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  9831867 taagtgtgtgtttgtttcaagttataattgttgattcccaggaataaaatga 9831918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 12190175 - 12190225
Alignment:
Q  153 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  12190175 aagggtgtgtttgtttcaagttataattgttgattttcgggaataaaatga 12190225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 14788795 - 14788749
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  14788795 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaat 14788749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 1007819 - 1007771
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  1007819 gggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatga 1007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27086067 - 27086017
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcatttt 51  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  27086067 gggaccaaaaataaaacaaaaaaatttgtgaggatgaaaacatctcatttt 27086017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 32824992 - 32824948
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||    
T  32824992 gtgtgtttgtttcaagttataattgttgatttccggaaataaaat 32824948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 4683371 - 4683422
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||| |||||||||| |||||||||||||||||| | ||||||||||    
T  4683371 taagggtgtctttgtttcaatttataattgttgattcccagaaataaaatga 4683422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 29091741 - 29091690
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||| ||||||||||| |  ||||||||||    
T  29091741 taagggtgtgtttgtttcaagttatatttgttgattcctgataataaaatga 29091690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 33261771 - 33261724
Alignment:
Q  31 aggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||    
T  33261771 aggatgaaaacatctcattttattttttagggactaaaatcaaaattt 33261724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 33281930 - 33281883
Alignment:
Q  31 aggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||    
T  33281930 aggatgaaaacatctcattttattttttagggactaaaatcaaaattt 33281883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 48916019 - 48916070
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||| |||||||||||| ||||||||||| | |||||||||||    
T  48916019 taagggtgtgtttatttcaagttatatttgttgattccagagaataaaatga 48916070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 5850844 - 5850797
Alignment:
Q  30 gaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||||    
T  5850844 gaggatgaaaacatcttattttatttttta-ggattaaaatcaaaattt 5850797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 13114853 - 13114817
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13114853 gagaaatgctagcgacactctcttttggacactctct 13114817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 146
Target Start/End: Original strand, 13114670 - 13114700
Alignment:
Q  116 tgctagcaacactctcttttggacactctct 146  Q
    |||||||||||||||||||||||||||||||    
T  13114670 tgctagcaacactctcttttggacactctct 13114700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 50190762 - 50190812
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatg 202  Q
    |||| |||||||||||||||| |||||||||| ||| |||| |||||||||    
T  50190762 taagagtgtgtttgtttcaagatataattgttaatttccggaaataaaatg 50190812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 2058630 - 2058585
Alignment:
Q  30 gaggatgaaaacatctcattttattttgtacggattaaaatcaaaa 75  Q
    ||||||||||||||||||||||| ||| || |||||||||| ||||    
T  2058630 gaggatgaaaacatctcattttactttttagggattaaaatgaaaa 2058585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 31806759 - 31806804
Alignment:
Q  158 tgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||| |||| |||||| | |||||||||||    
T  31806759 tgtgtttgtttcaagttatatttgtagattcctgagaataaaatga 31806804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 52699465 - 52699514
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||| ||||||||||||||||| | || |||||| |||||||||||||    
T  52699465 agggtgcgtttgtttcaagttatattcgtagattcctgggaataaaatga 52699514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 13889325 - 13889293
Alignment:
Q  114 aatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||| |||||||||    
T  13889325 aatgctagcaacactctcttttgaacactctct 13889293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 15928732 - 15928696
Alignment:
Q  116 tgctagcaacactctcttttggacactctctaatact 152  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  15928732 tgctaccaacactctcttttgaacactctctaatact 15928696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 41095792 - 41095756
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    |||||||||||||||||||||||||||  ||||||||    
T  41095792 gagaaatgctagcaacactctcttttgagcactctct 41095756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 50773105 - 50773141
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  50773105 gagaaatgctagcaatactctcttttgaacactctct 50773141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 23757397 - 23757321
Alignment:
Q  2 ggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||    
T  23757397 ggaccaaaaataaaacaaaaaaatttgtgaggatgaaaacatctcattttattttttagggattaaaattaaaattt 23757321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 25837988 - 25837934
Alignment:
Q  149 tactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25837988 tacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 25837934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 1554353 - 1554402
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1554353 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 1554402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 12710717 - 12710668
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12710717 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 12710668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 35818423 - 35818472
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35818423 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 35818472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 38364153 - 38364104
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38364153 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 38364104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 18726619 - 18726667
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18726619 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 18726667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 26062219 - 26062167
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26062219 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 26062167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 32660930 - 32660981
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32660930 taagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatga 32660981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 16313501 - 16313555
Alignment:
Q  149 tactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16313501 tacttagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatga 16313555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 37392545 - 37392594
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37392545 agggtgtatttgtttcaagttataattgttgattcccgggaataaaatga 37392594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 38132736 - 38132785
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38132736 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 38132785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 10896217 - 10896265
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10896217 gggtgtgtttgtttcaagttataattgttgattcccaggaataaaatga 10896265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 41228713 - 41228761
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatg 202  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41228713 agggtgtgtttgtttcaagttataattgttaattcccgggaataaaatg 41228761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 26601935 - 26601986
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  26601935 taaggatgtgtttgtttcaaattataattgttgattcccgggaataaaatga 26601986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 42755937 - 42755890
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  42755937 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatga 42755890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 3050074 - 3050032
Alignment:
Q  161 gtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3050074 gtttgtttcaagttataattgttgattcccgggaataaaatga 3050032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 7931306 - 7931262
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  7931306 gtgtttgtttcaagttataattgttgattcctgggaataaaatga 7931262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 40197076 - 40197124
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  40197076 gggtatgtttgtttcaagttataattgttgattcccggaaataaaatga 40197124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 6387560 - 6387598
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctctaa 148  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6387560 gagaaatgctagcaacactctcttttggacactctctaa 6387598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22210066 - 22209993
Alignment:
Q  5 ccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||| || || | |  |||||||||||||    
T  22210066 ccaaatctaaaacaaaaaaatttgtgaggatgaaaacatctcattttatcttttaggaacaaaaatcaaaattt 22209993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 7317452 - 7317412
Alignment:
Q  147 aatactaagggtgtgtttgtttcaagttataattgttgatt 187  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  7317452 aatactaagggtgtgtttgtttcaagttatatttgttgatt 7317412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 8635708 - 8635664
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaat 196  Q
    |||| |||||||||||||||||||||||||||||||||| |||||    
T  8635708 taagagtgtgtttgtttcaagttataattgttgattcccaggaat 8635664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 18298183 - 18298135
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  18298183 gggtttgtttgtttcaagttataatttttgattctcgggaataaaatga 18298135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 33444627 - 33444674
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||    
T  33444627 ggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatga 33444674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 5020492 - 5020538
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||    
T  5020492 gtgtgtttgtttcaagttatatttgttgattcatgggaataaaatga 5020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 15249560 - 15249636
Alignment:
Q  2 ggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||||  |||| || ||| |||| ||||||||||||||||||||||||||| ||  ||  |||||||||||||    
T  15249560 ggaccaaaaacaaaataaaaaattttgtgaggatgaaaacatctcattttattttttagtgacgaaaatcaaaattt 15249636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 36128682 - 36128634
Alignment:
Q  30 gaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    ||||||||||||||||| ||||||||| || |||| |||||||||||||    
T  36128682 gaggatgaaaacatctcgttttattttttaaggatcaaaatcaaaattt 36128634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 158809 - 158738
Alignment:
Q  7 aaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||| |||||||| ||| |||| | ||||||||||||||||||||||||| || |||  |||| ||||||||    
T  158809 aaaaataaaacaaaaaattttgtgtggatgaaaacatctcattttattttttagggaccaaaaccaaaattt 158738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 25899702 - 25899657
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    |||||||||||||||| ||||| |||| |||||| |||||||||||    
T  25899702 ggtgtgtttgtttcaaattatatttgtagattcctgggaataaaat 25899657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 35394462 - 35394413
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||| |||||||||||||||||| || ||||||| || |||||||||||    
T  35394462 agggtttgtttgtttcaagttatatttattgattcacgagaataaaatga 35394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 1961439 - 1961407
Alignment:
Q  114 aatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||| |||||||||    
T  1961439 aatgctagcaacactctcttttgaacactctct 1961407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 13407322 - 13407354
Alignment:
Q  114 aatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||| |||||||||    
T  13407322 aatgctagcaacactctcttttgaacactctct 13407354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 16983575 - 16983543
Alignment:
Q  114 aatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||| |||||||||    
T  16983575 aatgctagcaacactctcttttgaacactctct 16983543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 21137134 - 21137178
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    |||||||||||| |||||||| ||||||||||| | |||||||||    
T  21137134 gtgtgtttgtttgaagttatatttgttgattcctgagaataaaat 21137178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 40435979 - 40435927
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40435979 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 40435927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 6279918 - 6279969
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6279918 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 6279969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 23686865 - 23686814
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23686865 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 23686814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 35999776 - 35999713
Alignment:
Q  140 actctctaatactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35999776 actctctaactctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 35999713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 39835304 - 39835355
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39835304 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 39835355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 48879403 - 48879352
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48879403 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 48879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 27762894 - 27762947
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27762894 actatgggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 27762947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 45747795 - 45747844
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45747795 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 45747844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 55967999 - 55968048
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55967999 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 55968048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 25916032 - 25916083
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25916032 taagggtgtgtttgtttcaagttataatttttgattcccgggaataaaatga 25916083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 936202 - 936153
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  936202 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaatga 936153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 27555486 - 27555437
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27555486 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatga 27555437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 39498901 - 39498852
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39498901 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatga 39498852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 39502240 - 39502191
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39502240 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatga 39502191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 39730292 - 39730341
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39730292 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatga 39730341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41823650 - 41823573
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||| |||||||||||||| |||||||  |||||| ||||||||||||||||| || || ||||||||||||||||||    
T  41823650 gggatcaaaactaaaacaaaaaaatttatgaggataaaaacatctcattttatcttttaaggattaaaatcaaaattt 41823573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 41859046 - 41859095
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41859046 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatga 41859095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 34049597 - 34049645
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34049597 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatga 34049645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 34237424 - 34237468
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34237424 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 34237468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 48518891 - 48518939
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48518891 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaatga 48518939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 18405233 - 18405280
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 201  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  18405233 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaat 18405280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 25932517 - 25932468
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  25932517 agggtgtgtttgtttcaagttataattgttgattcctaggaataaaatga 25932468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 30415982 - 30415929
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  30415982 actaagggtgtgtttgtttcaagttatatttgttgattcccgataataaaatga 30415929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 42774024 - 42773975
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  42774024 agggtgtgtttgtttcaagttataattgttgatttctgggaataaaatga 42773975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 43723340 - 43723291
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  43723340 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatga 43723291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 13229989 - 13230037
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||    
T  13229989 gggtgtgtttgtttcaagttataattttttattcccgggaataaaatga 13230037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 27942814 - 27942770
Alignment:
Q  159 gtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  27942814 gtgtttgtttcaagttataattgttgattcccggaaataaaatga 27942770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 41744216 - 41744268
Alignment:
Q  151 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  41744216 ctaagagtgtgtttatttcaagttataattgttgatttccgggaataaaatga 41744268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 47670436 - 47670389
Alignment:
Q  156 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||    
T  47670436 ggtgtgtttgtttcaagttataattgttgattcctggaaataaaatga 47670389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 18931826 - 18931780
Alignment:
Q  157 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||    
T  18931826 gtgtgtttgtttcaagttataattgttgatttctgggaataaaatga 18931780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 41609138 - 41609088
Alignment:
Q  2 ggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcatttta 52  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  41609138 ggaccaaaactaaaacaaaaaaatttgtgaggatgaaaacatctaatttta 41609088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 17947287 - 17947340
Alignment:
Q  25 tttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||| ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  17947287 tttgtgaggatgaaaacatctcattttattttttagggactaaaatcaaaattt 17947340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 45596344 - 45596295
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  45596344 agggtgcgtttgtttcaagttataattgttgattttcgggaataaaatga 45596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 32953598 - 32953550
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  32953598 gggtgtgtttgtctcaagttataattgttgattcccaggaacaaaatga 32953550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 8322308 - 8322272
Alignment:
Q  167 ttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||| |||||||||||||    
T  8322308 ttcaagttataattgttgattcctgggaataaaatga 8322272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 8109143 - 8109105
Alignment:
Q  108 ttgagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  8109143 ttgagtaatgctagcaacactctcttttgaacactctct 8109105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 33413930 - 33413856
Alignment:
Q  7 aaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaatttact 81  Q
    |||| |||||||| | ||| || ||| | ||||||||||||||||||||| || ||| ||| |||||||||||||    
T  33413930 aaaaataaaacaaaagaatatgtgagaaggaaaacatctcattttattttttagggactaatatcaaaatttact 33413856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 50672903 - 50672953
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||||||||||||    
T  50672903 actaagggtgtgtttgttttaagt--taattgttgatt-ccgggaataaaatga 50672953  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 36620993 - 36620948
Alignment:
Q  34 atgaaaacatctcattttattttgtacggattaaaatcaaaattta 79  Q
    ||||||||||||||||||||||| || | | |||||||||||||||    
T  36620993 atgaaaacatctcattttattttttaggaactaaaatcaaaattta 36620948  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 37315559 - 37315596
Alignment:
Q  109 tgagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  37315559 tgagaaatgctagcaacactctcttttgagcactctct 37315596  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 24834575 - 24834611
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  24834575 gagaaatgctagcaacactcactttttgacactctct 24834611  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 29175622 - 29175662
Alignment:
Q  37 aaaacatctcattttattttgtacggattaaaatcaaaatt 77  Q
    ||||||||| |||||||||| || |||||||||||||||||    
T  29175622 aaaacatctaattttattttttatggattaaaatcaaaatt 29175662  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 39016849 - 39016813
Alignment:
Q  110 gagaaatgctagcaacactctcttttggacactctct 146  Q
    |||||||| |||||||||||||||||| |||||||||    
T  39016849 gagaaatgttagcaacactctcttttgaacactctct 39016813  T

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Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 2657774 - 2657723
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2657774 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 2657723  T

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Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 7053567 - 7053618
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7053567 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 7053618  T

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Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 8029407 - 8029356
Alignment:
Q  152 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8029407 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 8029356  T

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Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 1317089 - 1317041
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1317089 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 1317041  T

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Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 14171085 - 14171036
Alignment:
Q  154 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14171085 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatga 14171036  T

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Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 4096756 - 4096821
Alignment:
Q  13 aaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    ||||||| |||||||| || |||||||||||||||||| ||||| || ||||||||||||||||||    
T  4096756 aaaacaaaaaaatttgtgatgatgaaaacatctcatttaattttttagggattaaaatcaaaattt 4096821  T

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Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 6705752 - 6705812
Alignment:
Q  142 tctctaatactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatg 202  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||   |||||||||||    
T  6705752 tctctaatacttagggtgtgtttgtttcaagttatatttgttgattcattggaataaaatg 6705812  T

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Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 18897989 - 18897948
Alignment:
Q  158 tgtgtttgtttcaagttataattgttgattcccgggaataaa 199  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  18897989 tgtgtttgtttcaagttataattgttgattcccggaaataaa 18897948  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3014519 - 3014595
Alignment:
Q  1 gggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaatt 77  Q
    |||||||||| |||| ||| |||||||| |||||| |||||||| ||||||||||| || | |||||||| ||||||    
T  3014519 gggaccaaaaataaagcaaaaaaatttgtgaggataaaaacatcacattttattttttaggaattaaaataaaaatt 3014595  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 10246222 - 10246258
Alignment:
Q  155 gggtgtgtttgtttcaagttataattgttgattcccg 191  Q
    |||||||||||||||||||||||||||||||||||||    
T  10246222 gggtgtgtttgtttcaagttataattgttgattcccg 10246258  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 1111999 - 1112069
Alignment:
Q  4 accaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaat 76  Q
    ||||||| ||||||||  || ||||| |||||||||||||||||||| ||||| || |||||||||| |||||    
T  1111999 accaaaagtaaaacaa--aattttgcaaggatgaaaacatctcatttaattttttagggattaaaattaaaat 1112069  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 3869581 - 3869528
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||  |||| |||| | |||||||||||||    
T  3869581 actaagggtgtgtttgtttcaagttatttttgtagatttctgggaataaaatga 3869528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 16968989 - 16968948
Alignment:
Q  162 tttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  16968989 tttgtttcaagttataattgttgattcctgagaataaaatga 16968948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 35128914 - 35128870
Alignment:
Q  102 aacttattgagaaatgctagcaacactctcttttggacactctct 146  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||    
T  35128914 aacttcttgagaagtgctagcaacactctcttttgaacactctct 35128870  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 7344078 - 7344131
Alignment:
Q  150 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||||||||||||| ||||||| ||||||||||  ||| ||| |||||||||||    
T  7344078 actaagggtgtgttcgtttcaaattataattgtaaatttccgagaataaaatga 7344131  T

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Target: scaffold0006 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 202006 - 201948
Alignment:
Q  145 ctaatactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  202006 ctaaaacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatga 201948  T

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Target: scaffold0939 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 684 - 760
Alignment:
Q  2 ggaccaaaactaaaacaataaaatttgcgaggatgaaaacatctcattttattttgtacggattaaaatcaaaattt 78  Q
    |||||||||||||||||| |||||||| || |||||||||| |||||| |||||| || ||| |||||| |||||||    
T  684 ggaccaaaactaaaacaaaaaaatttgtgatgatgaaaacaactcattatattttttagggaataaaattaaaattt 760  T

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Target: scaffold0189 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 28957 - 29000
Alignment:
Q  160 tgtttgtttcaagttataattgttgattcccgggaataaaatga 203  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  28957 tgtttgtttcaagttataattgttgattttcgggaataaaatga 29000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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