View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19903_low_9 (Length: 357)
Name: NF19903_low_9
Description: NF19903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19903_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 10 - 343
Target Start/End: Original strand, 53462108 - 53462441
Alignment:
| Q |
10 |
gcagagattagtgcagttctgtaacatgtttaccagacaagggtcaataattttgagattaatcaacattagcctgcatatacatggaaccaagttatta |
109 |
Q |
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| T |
53462108 |
gcagagattagtgcagttctgtaacatgtttaccagacaagcgtcaataattttgagattaatcaacattagcctgcatatacatggaaccaagttatta |
53462207 |
T |
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| Q |
110 |
gtgtaggtttgttcatgtacaaaaggaaacattcgattagattgagtagatattgtatagttagcacaagaattaatgtttcctaaggtttgaagtctta |
209 |
Q |
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| T |
53462208 |
gtgtaggtttgttcatgtacaaaaggaaacattcgattagattgagtagatattgtatagttagcacaagaattaatgtttcctaaggtttgaagtctta |
53462307 |
T |
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| Q |
210 |
agaccaagtgactgaccatacggaaacaggacgtagtttcttagttcattttgtgtctgtgatttagagacaatcatggttgatgacaagatcattagga |
309 |
Q |
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| T |
53462308 |
agaccaagtgactgaccatacggaaacaggacgtagtttcttagttcattttgtgtctgtgatttagagacaatcatggttgatgacaagatcattagga |
53462407 |
T |
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| Q |
310 |
tccctcaatcatgttttactattaagttattaat |
343 |
Q |
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| T |
53462408 |
tccctcaatcatgttttactattaagttattaat |
53462441 |
T |
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