View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19906_high_42 (Length: 334)

Name: NF19906_high_42
Description: NF19906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19906_high_42
NF19906_high_42
[»] chr4 (7 HSPs)
chr4 (171-318)||(4119428-4119568)
chr4 (1-104)||(4119317-4119420)
chr4 (19-131)||(20370190-20370302)
chr4 (245-288)||(5834908-5834951)
chr4 (246-288)||(21637743-21637785)
chr4 (246-288)||(39957642-39957684)
chr4 (246-283)||(5052268-5052305)
[»] chr7 (14 HSPs)
chr7 (28-106)||(29672833-29672910)
chr7 (9-96)||(42266291-42266378)
chr7 (19-130)||(923713-923824)
chr7 (245-317)||(1043068-1043143)
chr7 (245-288)||(2908236-2908279)
chr7 (245-288)||(16564376-16564419)
chr7 (245-288)||(16601243-16601286)
chr7 (245-288)||(26773709-26773752)
chr7 (248-290)||(7416687-7416729)
chr7 (246-288)||(47720170-47720212)
chr7 (245-290)||(8028770-8028815)
chr7 (248-289)||(40041453-40041494)
chr7 (246-290)||(554888-554932)
chr7 (248-288)||(35159940-35159980)
[»] chr5 (10 HSPs)
chr5 (19-131)||(19841996-19842108)
chr5 (245-288)||(3934785-3934828)
chr5 (245-291)||(5986065-5986111)
chr5 (246-288)||(19102463-19102505)
chr5 (246-291)||(5612440-5612485)
chr5 (247-288)||(6243168-6243209)
chr5 (247-288)||(11906296-11906337)
chr5 (246-290)||(12852184-12852228)
chr5 (248-288)||(30284607-30284647)
chr5 (246-290)||(39690761-39690805)
[»] chr3 (13 HSPs)
chr3 (19-131)||(13496617-13496729)
chr3 (245-287)||(24282463-24282505)
chr3 (245-288)||(28882675-28882718)
chr3 (245-288)||(35389828-35389871)
chr3 (247-290)||(42229750-42229793)
chr3 (245-288)||(52121258-52121301)
chr3 (246-288)||(3983775-3983817)
chr3 (246-288)||(19421494-19421536)
chr3 (245-291)||(30226495-30226541)
chr3 (246-288)||(55269014-55269056)
chr3 (246-291)||(21157727-21157772)
chr3 (249-290)||(22289722-22289763)
chr3 (248-288)||(30787562-30787602)
[»] chr2 (6 HSPs)
chr2 (19-131)||(23249767-23249879)
chr2 (249-288)||(45158134-45158173)
chr2 (245-288)||(18301050-18301093)
chr2 (246-288)||(44156675-44156717)
chr2 (245-290)||(6124249-6124294)
chr2 (246-290)||(2319351-2319395)
[»] chr1 (10 HSPs)
chr1 (245-293)||(41027943-41027991)
chr1 (245-288)||(13012989-13013032)
chr1 (245-288)||(31653399-31653442)
chr1 (247-290)||(34432382-34432425)
chr1 (245-290)||(3426924-3426969)
chr1 (249-290)||(9092494-9092535)
chr1 (246-287)||(32381057-32381098)
chr1 (245-290)||(37104196-37104241)
chr1 (19-75)||(12046073-12046129)
chr1 (246-290)||(28949239-28949283)
[»] chr8 (8 HSPs)
chr8 (19-75)||(6077039-6077095)
chr8 (245-288)||(17702573-17702616)
chr8 (245-290)||(25022201-25022246)
chr8 (246-291)||(34139709-34139754)
chr8 (35-115)||(23636879-23636959)
chr8 (245-288)||(32877515-32877558)
chr8 (245-288)||(42949208-42949251)
chr8 (35-75)||(6080696-6080736)
[»] chr6 (3 HSPs)
chr6 (19-115)||(15160421-15160517)
chr6 (34-112)||(15184022-15184100)
chr6 (35-115)||(15472904-15472984)
[»] scaffold0250 (1 HSPs)
scaffold0250 (245-288)||(5590-5633)
[»] scaffold0067 (1 HSPs)
scaffold0067 (249-287)||(4035-4073)
[»] scaffold1243 (1 HSPs)
scaffold1243 (35-112)||(1769-1846)


Alignment Details
Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 171 - 318
Target Start/End: Original strand, 4119428 - 4119568
Alignment:
Q  171 aacccactgatataaacggtaccacaagcttccaaagatctcacagtggaaaagaagatgctctgctgactcggtaaaaaataaaatttaattgtcggat 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4119428 aacccactgatataaacggtaccacaagcttccaaagatctcacagtggaaaagaagatgctctgctgactcggtaaaaaataaaatttaattgtcggat 4119527  T
Q  271 actctcccgatacgtatcagagctcaggcaggtatcaatgcaggatag 318  Q
    ||||||||||||||||       |||||||||||||||||||||||||    
T  4119528 actctcccgatacgta-------tcaggcaggtatcaatgcaggatag 4119568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4119317 - 4119420
Alignment:
Q  1 atccacagtttcctcttgaaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  4119317 atccacagtttccgcttgaaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagtttacttaaacgaaaggatatgtaaatcgcg 4119416  T
Q  101 gtaa 104  Q
    ||||    
T  4119417 gtaa 4119420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 20370190 - 20370302
Alignment:
Q  19 aaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgccatattcc 118  Q
    ||||| ||||||||| |||||||||||| ||| || ||||||||| | ||||||| ||  ||||||| || ||||||||||||||||| ||| ||||  |    
T  20370190 aaaattatgttgttcctttccttccaaataacccagacacaagcaagccagattattttcaggaaagaatgtgtaaatcgcggtaaccccgctatatggc 20370289  T
Q  119 caaaatgatgaag 131  Q
    |||| ||||||||    
T  20370290 caaactgatgaag 20370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 5834951 - 5834908
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  5834951 taaaaaataaaatttaatatttggatactctcccgatacgtatc 5834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 21637785 - 21637743
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  21637785 aaaaaataaaatttaatcttcggatactctcctgatacgtatc 21637743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 39957684 - 39957642
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  39957684 aaaaaataaaatttaatattcggatactctccggatacgtatc 39957642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 5052305 - 5052268
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatac 283  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  5052305 aaaaaataaagtttaattgtcggatactctctcgatac 5052268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 29672910 - 29672833
Alignment:
Q  28 ttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaacc 106  Q
    |||||| |||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  29672910 ttgttcttttccttcgaaacaac-caaacacaagcatgtcatattactttaaggaaaggatatgtaaatcgcgataacc 29672833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 42266291 - 42266378
Alignment:
Q  9 tttcctcttgaaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaat 96  Q
    ||||| ||||||||||  | ||||  |||||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||||||    
T  42266291 tttccgcttgaaaatctcgctgtttctttccttccaaacaacccaaacacaagcatgccagattactttaaggaaaggatgtgtaaat 42266378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 923824 - 923713
Alignment:
Q  19 aaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgccatattcc 118  Q
    ||||||||||||||| ||| |||||||| ||| || ||||||||||| ||| ||||||  || |||| || ||||||||| ||||||| ||||||||  |    
T  923824 aaaatcatgttgttcctttacttccaaataacccagacacaagcatgccaggttactttcagaaaagaatgtgtaaatcgtggtaaccccgccatatgac 923725  T
Q  119 caaaatgatgaa 130  Q
    |||| |||||||    
T  923724 caaactgatgaa 923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 1043068 - 1043143
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcaga---gctcaggcaggtatcaatgcaggata 317  Q
    ||||||||||||||||||  | |||||||||||||||||||||| ||     ||||||||||||| ||||||||||    
T  1043068 taaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcaggcaggtatcgatgcaggata 1043143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 2908236 - 2908279
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||    
T  2908236 taaaaaataaaacttaattgtcgggtactctccagatacgtatc 2908279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 16564376 - 16564419
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  16564376 taaaaaataaaatttaatatttggatactctcccgatacgtatc 16564419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 16601286 - 16601243
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  16601286 taaaaaataaaatttaatatttggatactctcccgatacgtatc 16601243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 26773709 - 26773752
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  26773709 taaaaaataaaatttaatatttggatactctcccgatacgtatc 26773752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 7416729 - 7416687
Alignment:
Q  248 aaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    |||||||||||||||  ||||||||||||| ||||||||||||    
T  7416729 aaaataaaatttaatcttcggatactctcctgatacgtatcag 7416687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 47720170 - 47720212
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  47720170 aaaaaataaaatttaatattcggatactctccggatacgtatc 47720212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 8028815 - 8028770
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||| ||||||||||||  | ||||||||||||||||||||||||    
T  8028815 taaaatataaaatttaatatttggatactctcccgatacgtatcag 8028770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Complemental strand, 40041494 - 40041453
Alignment:
Q  248 aaaataaaatttaattgtcggatactctcccgatacgtatca 289  Q
    |||||||||||||||  ||||||||||||| |||||||||||    
T  40041494 aaaataaaatttaatcttcggatactctcctgatacgtatca 40041453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 554888 - 554932
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    |||||||||||||||||  ||| ||||||||| ||||||||||||    
T  554888 aaaaaataaaatttaatcttcgaatactctcctgatacgtatcag 554932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 35159980 - 35159940
Alignment:
Q  248 aaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||  ||||||||||||| ||||||||||    
T  35159980 aaaataaaatttaatcttcggatactctcctgatacgtatc 35159940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 19841996 - 19842108
Alignment:
Q  19 aaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgccatattcc 118  Q
    ||||||||||||||  ||||||| |||||||  |||||||||||||| ||||| ||||  ||||||||||||||||| || ||||||| |||||| |  |    
T  19841996 aaaatcatgttgtttctttcctttcaaacaatccaaacacaagcatgccagatcactttgaggaaaggatatgtaaaacgtggtaaccccgccatgtgac 19842095  T
Q  119 caaaatgatgaag 131  Q
    |||| ||||||||    
T  19842096 caaactgatgaag 19842108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 3934785 - 3934828
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||    
T  3934785 taaaaaataaaatttaatcttcggatactctcctgatacgtatc 3934828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 5986065 - 5986111
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcaga 291  Q
    ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  5986065 taaaaaataaaatttaatatttggatactctcccaatacgtatcaga 5986111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 19102463 - 19102505
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||||||| ||||||| | ||||||||||    
T  19102463 aaaaaataaaatttaattgtcgtatactcttctgatacgtatc 19102505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 5612440 - 5612485
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatcaga 291  Q
    |||||||||||||||||  ||||||||||||| | |||||||||||    
T  5612440 aaaaaataaaatttaatcttcggatactctcctggtacgtatcaga 5612485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 6243168 - 6243209
Alignment:
Q  247 aaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||  ||||||||||||| ||||||||||    
T  6243168 aaaaataaaatttaatattcggatactctccggatacgtatc 6243209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 11906337 - 11906296
Alignment:
Q  247 aaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||  ||||||||||||| ||||||||||    
T  11906337 aaaaataaaatttaatattcggatactctccggatacgtatc 11906296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 12852228 - 12852184
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    |||||||||||||||||  | ||||||||||| ||||||||||||    
T  12852228 aaaaaataaaatttaatatttggatactctccggatacgtatcag 12852184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 30284607 - 30284647
Alignment:
Q  248 aaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||  ||||||||||||| ||||||||||    
T  30284607 aaaataaaatttaatcttcggatactctcctgatacgtatc 30284647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 39690761 - 39690805
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    |||||||||||||||||  | ||||||||||| ||||||||||||    
T  39690761 aaaaaataaaatttaatatttggatactctccggatacgtatcag 39690805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 13496729 - 13496617
Alignment:
Q  19 aaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgccatattcc 118  Q
    |||||||||||| ||||||||||||||| |||  | ||||||||||| || |||||||  || |||| || |||||||||| |||||| ||||||||  |    
T  13496729 aaaatcatgttggtcatttccttccaaataaccaagacacaagcatggcatattactttcagaaaagaatgtgtaaatcgcagtaacctcgccatataac 13496630  T
Q  119 caaaatgatgaag 131  Q
    |||| ||||||||    
T  13496629 caaattgatgaag 13496617  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 24282505 - 24282463
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtat 287  Q
    |||||||||||||||||||||||||||||| | ||||||||||    
T  24282505 taaaaaataaaatttaattgtcggatactccctcgatacgtat 24282463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 28882675 - 28882718
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  28882675 taaaaaataaaatttaatatttggatactctcccgatacgtatc 28882718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 35389871 - 35389828
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  35389871 taaaaaataaaatttaatatttggatactctcccgatacgtatc 35389828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 290
Target Start/End: Complemental strand, 42229793 - 42229750
Alignment:
Q  247 aaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||    
T  42229793 aaaaataaaatttaattttcggatactcttctgatacgtatcag 42229750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 52121301 - 52121258
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  52121301 taaaaaataaaatttaatatttggatactctcccgatacgtatc 52121258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 3983817 - 3983775
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  3983817 aaaaaataaaatttaatcttcggatactctcctgatacgtatc 3983775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 19421536 - 19421494
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  19421536 aaaaaataaaatttaatcttcggatactctcctgatacgtatc 19421494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 30226541 - 30226495
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcaga 291  Q
    ||||||||||||||||||  ||||||||||||  |||||||||||||    
T  30226541 taaaaaataaaatttaatcttcggatactctcttgatacgtatcaga 30226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 55269014 - 55269056
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  55269014 aaaaaataaaatttaatcttcggatactctcctgatacgtatc 55269056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 21157727 - 21157772
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatcaga 291  Q
    |||||||||||||||||  ||||||||||||| | |||||||||||    
T  21157727 aaaaaataaaatttaatcttcggatactctcctggtacgtatcaga 21157772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 22289722 - 22289763
Alignment:
Q  249 aaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||||||||||||  ||||||||||||| ||||||||||||    
T  22289722 aaataaaatttaatcttcggatactctcctgatacgtatcag 22289763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 30787562 - 30787602
Alignment:
Q  248 aaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||  ||||||||||||| ||||||||||    
T  30787562 aaaataaaatttaatcttcggatactctcctgatacgtatc 30787602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 23249879 - 23249767
Alignment:
Q  19 aaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgccatattcc 118  Q
    |||||| |||||||  |||||||||||||||  ||||||||||||||  |||| ||||  ||||||| || ||||||||  ||||||| ||||||||  |    
T  23249879 aaaatcctgttgtttctttccttccaaacaatccaaacacaagcatgcgagatcactttcaggaaagaatgtgtaaatcatggtaacctcgccatatgac 23249780  T
Q  119 caaaatgatgaag 131  Q
    |||| ||||||||    
T  23249779 caaactgatgaag 23249767  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 288
Target Start/End: Original strand, 45158134 - 45158173
Alignment:
Q  249 aaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  45158134 aaataaaatttaattgtcggatactctcccgatatgtatc 45158173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 18301093 - 18301050
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  18301093 taaaaaataaaatttaatatttggatactctcccgatacgtatc 18301050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 44156717 - 44156675
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  44156717 aaaaaataaaatttaatcttcggatactctcctgatacgtatc 44156675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 6124294 - 6124249
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||||||||||||||||  | ||||||||||| ||||||||||||    
T  6124294 taaaaaataaaatttaatatttggatactctccggatacgtatcag 6124249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 2319395 - 2319351
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    |||||||||||||||||  ||||||||||| | ||||||||||||    
T  2319395 aaaaaataaaatttaatcttcggatactcttctgatacgtatcag 2319351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 41027943 - 41027991
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcagagc 293  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41027943 taaaaaataaaatttaattgtcggatactctcccaatacgtatcggagc 41027991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 13012989 - 13013032
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  13012989 taaaaaataaaatttaatatttggatactctcccgatacgtatc 13013032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 31653399 - 31653442
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  31653399 taaaaaataaaatttaatatttggatactctcccgatacgtatc 31653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 290
Target Start/End: Original strand, 34432382 - 34432425
Alignment:
Q  247 aaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||    
T  34432382 aaaaataaaatttaatcttcggatactctcctgatacgtatcag 34432425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 3426969 - 3426924
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||||||||||||||||  | ||||||||||| ||||||||||||    
T  3426969 taaaaaataaaatttaatatttggatactctccggatacgtatcag 3426924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 9092494 - 9092535
Alignment:
Q  249 aaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||||||||||||  ||||||||||||| ||||||||||||    
T  9092494 aaataaaatttaatcttcggatactctcctgatacgtatcag 9092535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 32381057 - 32381098
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtat 287  Q
    |||||||||||||||||  ||||||||||||| |||||||||    
T  32381057 aaaaaataaaatttaatcttcggatactctcctgatacgtat 32381098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 37104241 - 37104196
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||||||||||||||||  | ||||||||||| ||||||||||||    
T  37104241 taaaaaataaaatttaatatttggatactctccggatacgtatcag 37104196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 12046129 - 12046073
Alignment:
Q  19 aaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattact 75  Q
    |||||| |||| || ||||||||||| | ||| || |||||||||||||||||||||    
T  12046129 aaaatcctgttatttatttccttccatataacccagacacaagcatgtcagattact 12046073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 28949239 - 28949283
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    |||||||||||||||||  | ||||||||||| ||||||||||||    
T  28949239 aaaaaataaaatttaatatttggatactctccggatacgtatcag 28949283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 6077095 - 6077039
Alignment:
Q  19 aaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattact 75  Q
    ||||||||||| || ||||||||||| | |||||| |||||||||||||||||||||    
T  6077095 aaaatcatgttatttatttccttccatataactcagacacaagcatgtcagattact 6077039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 17702616 - 17702573
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  17702616 taaaaaataaaatttaattttcagatactctcccgatacgtatc 17702573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 25022246 - 25022201
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatcag 290  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||    
T  25022246 taaaaaataaaatttaatatttggatactctcccgatacgtatcag 25022201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 34139754 - 34139709
Alignment:
Q  246 aaaaaataaaatttaattgtcggatactctcccgatacgtatcaga 291  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||    
T  34139754 aaaaaataaaatttaatcgccggatactctcccgatatgtatcaga 34139709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 23636879 - 23636959
Alignment:
Q  35 tttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgccatat 115  Q
    ||||||||||||  || ||||||||||||||  |||||||||  ||||||| ||  |||||||| ||||||| ||||||||    
T  23636879 tttccttccaaagtacccaaacacaagcatgcaagattactttgaggaaagaatgggtaaatcgtggtaaccccgccatat 23636959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 32877558 - 32877515
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  32877558 taaaaaataaaatttaatatttggatactctcccgatacgtatc 32877515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 42949251 - 42949208
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  42949251 taaaaaataaaatttaatatttggatactctcccgatacgtatc 42949208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 6080736 - 6080696
Alignment:
Q  35 tttccttccaaacaactcaaacacaagcatgtcagattact 75  Q
    |||||||||| | |||||| |||||||||||||||||||||    
T  6080736 tttccttccatataactcagacacaagcatgtcagattact 6080696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 15160421 - 15160517
Alignment:
Q  19 aaaatcatgttgttcatttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgccatat 115  Q
    ||||||||||| ||  |||||||||||||||  ||||||||||||||  |||| ||||  ||||||| || | |||||| |||||||| ||||||||    
T  15160421 aaaatcatgttatttctttccttccaaacaatccaaacacaagcatgcgagatcactttcaggaaagaatgtttaaatcacggtaaccccgccatat 15160517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 15184022 - 15184100
Alignment:
Q  34 atttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgcca 112  Q
    ||||||||||||||||  |||||| |||||||  |||| ||||  ||||||| || | ||||||||||||||| |||||    
T  15184022 atttccttccaaacaatccaaacagaagcatgcgagatcactttcaggaaagaatgtttaaatcgcggtaaccccgcca 15184100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 15472984 - 15472904
Alignment:
Q  35 tttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgccatat 115  Q
    ||||||||||||||| |||||| ||||||||  |||| ||||  ||||||| || | |||||||| ||||||  |||||||    
T  15472984 tttccttccaaacaattcaaactcaagcatgcgagatcactttcaggaaagaatgtttaaatcgcagtaaccctgccatat 15472904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 5633 - 5590
Alignment:
Q  245 taaaaaataaaatttaattgtcggatactctcccgatacgtatc 288  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  5633 taaaaaataaaatttaatatttggatactctcccgatacgtatc 5590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 4073 - 4035
Alignment:
Q  249 aaataaaatttaattgtcggatactctcccgatacgtat 287  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  4073 aaataaaatttaattgtcagatgctctcccgatacgtat 4035  T

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Target: scaffold1243 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 1846 - 1769
Alignment:
Q  35 tttccttccaaacaactcaaacacaagcatgtcagattacttaaaggaaaggatatgtaaatcgcggtaaccacgcca 112  Q
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T  1846 tttccttccaaacaatccaaacacaagcatgcgagatcattttcaggaaagaatgtttaaatcgcggtaaccccgcca 1769  T

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