View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19906_high_45 (Length: 320)
Name: NF19906_high_45
Description: NF19906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19906_high_45 |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 13 - 302
Target Start/End: Original strand, 44698176 - 44698457
Alignment:
| Q |
13 |
aaaattgcagtatattttttataaacttattctctagaaagatggttaaaggtataatttcagtcacaaattcacaaataacagacatagtagcttcgtg |
112 |
Q |
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| T |
44698176 |
aaaattgcagtatattttttataaacttattctctagaaagatggttaaaggtataatttcagtcac--------aaataacagacatagtagcttcgtg |
44698267 |
T |
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| Q |
113 |
gaactctttcaaaaagcatatattttaacatgtatcttttcaacaatctgcaaaaacaagagaaaaaggcgtttcttattagtcaaatagaaaagaatct |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44698268 |
gaactctttcaaaaagcatatattttaacatgtatcttttcaacaatctgcaaaaacaagagaaaaaggcgtttcttattagtcaaatagaaaagaatct |
44698367 |
T |
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| Q |
213 |
gagcagaaacaagattctaaacaaattgaaattaaactaacatgctaatatatgagataaatgattactgggattgggaacaacatcaac |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
44698368 |
gagcagaaacaagattctaaacaaattgaaattaaactaacatgctaatatatgagataaatgattactggaattgggaacaacatcaac |
44698457 |
T |
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