View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19906_low_28 (Length: 421)

Name: NF19906_low_28
Description: NF19906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19906_low_28
NF19906_low_28
[»] chr4 (60 HSPs)
chr4 (13-173)||(54150834-54150994)
chr4 (13-219)||(5418802-5419009)
chr4 (13-227)||(17450703-17450918)
chr4 (104-229)||(25197400-25197526)
chr4 (105-229)||(46433186-46433310)
chr4 (338-396)||(47890698-47890757)
chr4 (337-400)||(42395229-42395293)
chr4 (338-402)||(52798281-52798345)
chr4 (115-229)||(229792-229907)
chr4 (338-396)||(10402444-10402503)
chr4 (338-396)||(13578473-13578532)
chr4 (338-385)||(19594236-19594283)
chr4 (174-229)||(28992685-28992740)
chr4 (88-229)||(56192220-56192360)
chr4 (343-385)||(12267526-12267568)
chr4 (339-385)||(12678511-12678557)
chr4 (338-384)||(37310030-37310076)
chr4 (338-399)||(37935864-37935926)
chr4 (198-238)||(12832484-12832525)
chr4 (180-229)||(16529836-16529885)
chr4 (348-400)||(42218763-42218816)
chr4 (349-400)||(38228451-38228503)
chr4 (197-229)||(48085414-48085446)
chr4 (344-396)||(56479235-56479287)
chr4 (338-385)||(3036075-3036122)
chr4 (338-396)||(5165860-5165919)
chr4 (338-396)||(7686270-7686329)
chr4 (338-396)||(8965097-8965156)
chr4 (344-400)||(12167619-12167677)
chr4 (338-400)||(26919472-26919535)
chr4 (338-396)||(31852621-31852680)
chr4 (338-396)||(39023178-39023237)
chr4 (338-396)||(40051625-40051684)
chr4 (198-229)||(43407342-43407373)
chr4 (338-396)||(43978011-43978070)
chr4 (338-396)||(48569184-48569243)
chr4 (338-396)||(49901485-49901544)
chr4 (338-396)||(50376657-50376716)
chr4 (338-385)||(55853128-55853175)
chr4 (351-396)||(481553-481599)
chr4 (338-399)||(24680091-24680153)
chr4 (338-396)||(26868352-26868410)
chr4 (108-229)||(36755118-36755240)
chr4 (338-396)||(39696346-39696404)
chr4 (339-400)||(42134461-42134523)
chr4 (337-378)||(627009-627050)
chr4 (348-385)||(4357895-4357932)
chr4 (348-396)||(8144599-8144648)
chr4 (348-396)||(21935490-21935539)
chr4 (198-238)||(38476325-38476366)
chr4 (348-396)||(42381121-42381170)
chr4 (335-400)||(44195629-44195694)
chr4 (337-378)||(46582636-46582677)
chr4 (341-377)||(922276-922312)
chr4 (344-380)||(18424922-18424958)
chr4 (336-384)||(35851722-35851770)
chr4 (199-238)||(37182697-37182737)
chr4 (338-382)||(40994126-40994170)
chr4 (348-396)||(42073172-42073220)
chr4 (363-399)||(46582345-46582381)
[»] chr3 (54 HSPs)
chr3 (47-226)||(37104073-37104252)
chr3 (13-125)||(48085492-48085604)
chr3 (134-228)||(48082370-48082465)
chr3 (337-396)||(53432745-53432805)
chr3 (107-220)||(45073349-45073463)
chr3 (338-396)||(25938938-25938997)
chr3 (338-400)||(34847546-34847609)
chr3 (338-396)||(39719938-39719997)
chr3 (338-396)||(53163597-53163656)
chr3 (107-193)||(20936126-20936212)
chr3 (344-396)||(4200593-4200646)
chr3 (344-396)||(25638397-25638450)
chr3 (344-396)||(29098701-29098754)
chr3 (339-396)||(42496378-42496435)
chr3 (338-397)||(12894537-12894597)
chr3 (338-378)||(22472341-22472381)
chr3 (348-396)||(25833836-25833884)
chr3 (338-378)||(44364024-44364064)
chr3 (337-396)||(51772891-51772951)
chr3 (338-396)||(1743805-1743864)
chr3 (338-400)||(7269958-7270021)
chr3 (338-396)||(7938304-7938363)
chr3 (338-400)||(8964780-8964843)
chr3 (338-385)||(17602696-17602743)
chr3 (338-396)||(17608327-17608386)
chr3 (338-396)||(18194341-18194400)
chr3 (338-396)||(19999870-19999929)
chr3 (338-396)||(22501939-22501998)
chr3 (198-229)||(26952600-26952631)
chr3 (338-396)||(29373457-29373516)
chr3 (339-397)||(29559681-29559740)
chr3 (338-396)||(30779575-30779634)
chr3 (198-229)||(37333180-37333211)
chr3 (338-396)||(45871020-45871079)
chr3 (338-396)||(47098735-47098794)
chr3 (338-396)||(48546176-48546235)
chr3 (338-396)||(52945898-52945957)
chr3 (338-396)||(52974061-52974120)
chr3 (197-227)||(1765618-1765648)
chr3 (339-377)||(29496134-29496172)
chr3 (348-400)||(10482857-10482910)
chr3 (344-385)||(11436513-11436554)
chr3 (348-396)||(41936415-41936464)
chr3 (338-394)||(50536842-50536899)
chr3 (335-396)||(54021343-54021404)
chr3 (337-396)||(5636807-5636867)
chr3 (349-396)||(13638253-13638301)
chr3 (337-396)||(15975154-15975214)
chr3 (337-381)||(25363575-25363619)
chr3 (349-396)||(34102619-34102667)
chr3 (337-396)||(39169764-39169823)
chr3 (18-70)||(45073466-45073518)
chr3 (349-385)||(45198737-45198773)
chr3 (337-377)||(46310725-46310765)
[»] chr8 (57 HSPs)
chr8 (13-229)||(13125160-13125377)
chr8 (13-238)||(8851425-8851656)
chr8 (338-396)||(23339904-23339963)
chr8 (339-396)||(14582448-14582505)
chr8 (337-396)||(10030414-10030474)
chr8 (338-396)||(8034420-8034479)
chr8 (338-400)||(31450961-31451024)
chr8 (338-396)||(42880951-42881010)
chr8 (338-396)||(43656039-43656098)
chr8 (13-82)||(27878978-27879045)
chr8 (13-82)||(28019159-28019226)
chr8 (339-385)||(43403296-43403342)
chr8 (339-397)||(44088963-44089021)
chr8 (348-396)||(13773400-13773449)
chr8 (338-391)||(41458298-41458351)
chr8 (338-396)||(1937313-1937372)
chr8 (338-396)||(7453355-7453414)
chr8 (338-396)||(10083166-10083225)
chr8 (338-396)||(10200689-10200748)
chr8 (338-396)||(10573104-10573163)
chr8 (338-396)||(23178899-23178958)
chr8 (338-396)||(26022250-26022309)
chr8 (337-395)||(27077106-27077165)
chr8 (338-396)||(33617975-33618034)
chr8 (338-396)||(34158665-34158724)
chr8 (338-396)||(36540290-36540349)
chr8 (338-381)||(37047018-37047061)
chr8 (338-396)||(37090621-37090680)
chr8 (338-396)||(37717366-37717425)
chr8 (338-396)||(38344052-38344111)
chr8 (338-396)||(38955202-38955261)
chr8 (338-396)||(43283974-43284033)
chr8 (338-396)||(43856390-43856449)
chr8 (338-384)||(1342726-1342772)
chr8 (335-377)||(3949109-3949151)
chr8 (183-229)||(7186192-7186238)
chr8 (338-384)||(8698601-8698647)
chr8 (337-383)||(20164230-20164276)
chr8 (339-396)||(22274619-22274677)
chr8 (338-399)||(33838327-33838389)
chr8 (347-396)||(44444556-44444606)
chr8 (348-396)||(5328575-5328624)
chr8 (198-242)||(6148492-6148537)
chr8 (344-385)||(6511536-6511577)
chr8 (348-385)||(7109310-7109347)
chr8 (344-400)||(7388464-7388521)
chr8 (348-385)||(7763959-7763996)
chr8 (348-396)||(24480829-24480878)
chr8 (348-400)||(29499591-29499644)
chr8 (338-395)||(32719617-32719674)
chr8 (348-396)||(34894382-34894431)
chr8 (337-400)||(8862130-8862194)
chr8 (338-378)||(13406603-13406643)
chr8 (338-378)||(34472300-34472340)
chr8 (345-396)||(41616374-41616426)
chr8 (341-396)||(42035342-42035398)
chr8 (338-378)||(43186856-43186896)
[»] chr2 (47 HSPs)
chr2 (13-226)||(30471435-30471649)
chr2 (32-165)||(22832213-22832346)
chr2 (14-165)||(22823394-22823545)
chr2 (44-124)||(20379927-20380007)
chr2 (116-229)||(20379791-20379905)
chr2 (338-396)||(40363079-40363138)
chr2 (335-385)||(37352513-37352563)
chr2 (143-207)||(8245153-8245218)
chr2 (175-230)||(840322-840377)
chr2 (338-396)||(8742832-8742891)
chr2 (104-226)||(43994221-43994344)
chr2 (116-161)||(16870303-16870348)
chr2 (337-381)||(32168930-32168974)
chr2 (197-229)||(32406868-32406900)
chr2 (338-378)||(33041890-33041930)
chr2 (341-396)||(33816424-33816480)
chr2 (337-396)||(38179253-38179313)
chr2 (338-396)||(4562760-4562819)
chr2 (338-396)||(8250309-8250368)
chr2 (338-385)||(9330521-9330568)
chr2 (338-400)||(11050761-11050824)
chr2 (338-396)||(29772286-29772345)
chr2 (338-400)||(32609191-32609254)
chr2 (338-396)||(33228941-33229000)
chr2 (338-385)||(33669739-33669786)
chr2 (338-396)||(34613982-34614041)
chr2 (338-396)||(2806510-2806568)
chr2 (338-384)||(5062300-5062346)
chr2 (338-395)||(18278426-18278484)
chr2 (335-389)||(29942142-29942196)
chr2 (339-396)||(30392840-30392898)
chr2 (338-384)||(35798047-35798093)
chr2 (337-383)||(40931138-40931184)
chr2 (339-377)||(42199909-42199947)
chr2 (348-396)||(1500974-1501023)
chr2 (348-396)||(1844830-1844879)
chr2 (338-395)||(7281698-7281755)
chr2 (338-383)||(11144236-11144281)
chr2 (348-400)||(37063533-37063586)
chr2 (337-396)||(3287064-3287124)
chr2 (348-396)||(6331575-6331623)
chr2 (337-389)||(6635983-6636035)
chr2 (349-396)||(19612729-19612777)
chr2 (344-399)||(20898058-20898114)
chr2 (344-380)||(33222179-33222215)
chr2 (349-396)||(38387677-38387725)
chr2 (338-378)||(39408717-39408757)
[»] chr1 (48 HSPs)
chr1 (13-227)||(32473972-32474187)
chr1 (13-180)||(17349887-17350054)
chr1 (13-209)||(27000956-27001150)
chr1 (13-168)||(48260927-48261081)
chr1 (20-214)||(9904127-9904320)
chr1 (174-226)||(9694112-9694164)
chr1 (115-229)||(14099699-14099814)
chr1 (175-229)||(48379480-48379534)
chr1 (338-396)||(18534004-18534063)
chr1 (338-396)||(30360415-30360474)
chr1 (338-396)||(42054336-42054395)
chr1 (196-230)||(4249010-4249044)
chr1 (198-239)||(14624964-14625006)
chr1 (174-228)||(15342894-15342948)
chr1 (348-396)||(14349657-14349706)
chr1 (338-383)||(47478870-47478915)
chr1 (341-385)||(5413347-5413391)
chr1 (344-395)||(10699192-10699244)
chr1 (338-378)||(25580691-25580731)
chr1 (344-396)||(51942304-51942356)
chr1 (338-396)||(3269622-3269681)
chr1 (338-385)||(4553566-4553613)
chr1 (338-396)||(7166235-7166294)
chr1 (338-396)||(21265659-21265718)
chr1 (338-396)||(22563389-22563448)
chr1 (338-396)||(26584754-26584813)
chr1 (338-385)||(27344482-27344529)
chr1 (338-396)||(33207208-33207267)
chr1 (338-396)||(35605631-35605690)
chr1 (338-396)||(40520833-40520892)
chr1 (342-396)||(40634208-40634263)
chr1 (338-396)||(42490418-42490477)
chr1 (338-396)||(43884797-43884856)
chr1 (338-396)||(44732636-44732695)
chr1 (338-395)||(9866193-9866251)
chr1 (342-396)||(10248438-10248492)
chr1 (338-396)||(10664803-10664861)
chr1 (338-395)||(13773171-13773229)
chr1 (115-161)||(27740509-27740555)
chr1 (116-229)||(52575404-52575518)
chr1 (344-396)||(1604232-1604284)
chr1 (348-396)||(2556569-2556618)
chr1 (348-400)||(6130037-6130090)
chr1 (348-396)||(18467206-18467255)
chr1 (348-396)||(47930679-47930728)
chr1 (338-383)||(48607771-48607816)
chr1 (349-396)||(13538454-13538502)
chr1 (338-378)||(52369600-52369640)
[»] chr5 (45 HSPs)
chr5 (13-227)||(42697839-42698054)
chr5 (13-207)||(1987768-1987962)
chr5 (17-238)||(36972097-36972313)
chr5 (338-396)||(5900295-5900353)
chr5 (338-395)||(6414071-6414128)
chr5 (338-396)||(546805-546864)
chr5 (338-381)||(1469728-1469771)
chr5 (338-396)||(12891560-12891619)
chr5 (338-396)||(26912836-26912895)
chr5 (338-396)||(9125666-9125724)
chr5 (339-396)||(17175059-17175117)
chr5 (198-238)||(9622438-9622479)
chr5 (200-240)||(19279423-19279464)
chr5 (341-382)||(32389657-32389698)
chr5 (336-381)||(33383574-33383619)
chr5 (116-161)||(33530999-33531044)
chr5 (344-396)||(33736022-33736075)
chr5 (340-396)||(34389621-34389677)
chr5 (349-396)||(35241410-35241458)
chr5 (338-396)||(2362972-2363031)
chr5 (338-385)||(6526053-6526100)
chr5 (338-400)||(6558804-6558867)
chr5 (338-385)||(10758824-10758871)
chr5 (338-396)||(17545180-17545239)
chr5 (13-60)||(20351081-20351128)
chr5 (338-396)||(27765260-27765319)
chr5 (337-396)||(29154845-29154904)
chr5 (338-400)||(40361583-40361646)
chr5 (338-396)||(42525403-42525462)
chr5 (338-396)||(1743130-1743188)
chr5 (338-384)||(10241728-10241774)
chr5 (338-399)||(42885832-42885894)
chr5 (343-384)||(7968387-7968428)
chr5 (344-396)||(16280255-16280308)
chr5 (344-385)||(18026848-18026889)
chr5 (104-161)||(24765128-24765184)
chr5 (348-400)||(33433923-33433976)
chr5 (348-396)||(39886220-39886269)
chr5 (339-380)||(43328273-43328314)
chr5 (338-378)||(626770-626810)
chr5 (337-396)||(4238316-4238376)
chr5 (337-400)||(22228966-22229030)
chr5 (325-396)||(25400375-25400447)
chr5 (344-396)||(38030945-38030997)
chr5 (338-378)||(40091480-40091520)
[»] chr7 (49 HSPs)
chr7 (13-214)||(27164488-27164687)
chr7 (13-137)||(37526673-37526796)
chr7 (107-229)||(16706638-16706760)
chr7 (107-229)||(17680874-17680996)
chr7 (338-396)||(21066889-21066948)
chr7 (338-400)||(42182202-42182265)
chr7 (117-226)||(2472875-2472985)
chr7 (337-400)||(28735730-28735794)
chr7 (338-396)||(9712206-9712265)
chr7 (338-396)||(47641048-47641107)
chr7 (340-396)||(9497971-9498028)
chr7 (338-396)||(3392470-3392529)
chr7 (338-396)||(3766814-3766873)
chr7 (337-400)||(7691874-7691937)
chr7 (338-396)||(9877275-9877334)
chr7 (338-396)||(10244897-10244956)
chr7 (338-396)||(15106699-15106758)
chr7 (338-396)||(15238892-15238951)
chr7 (338-396)||(19752976-19753035)
chr7 (338-396)||(23102566-23102625)
chr7 (338-396)||(25833558-25833617)
chr7 (338-396)||(30388515-30388574)
chr7 (338-396)||(30806118-30806177)
chr7 (338-385)||(37300119-37300166)
chr7 (338-385)||(38889513-38889560)
chr7 (338-396)||(41084042-41084101)
chr7 (338-396)||(48447752-48447811)
chr7 (335-385)||(13730117-13730167)
chr7 (338-380)||(18223742-18223784)
chr7 (338-396)||(29625924-29625982)
chr7 (338-396)||(34051883-34051941)
chr7 (337-383)||(44377067-44377113)
chr7 (337-383)||(44385934-44385980)
chr7 (338-395)||(47999783-47999841)
chr7 (348-396)||(1563747-1563796)
chr7 (337-378)||(4232369-4232410)
chr7 (338-383)||(5073270-5073315)
chr7 (104-161)||(9907184-9907241)
chr7 (104-161)||(31115226-31115283)
chr7 (180-229)||(33744019-33744068)
chr7 (348-400)||(41465847-41465900)
chr7 (344-395)||(1398912-1398964)
chr7 (170-226)||(1910974-1911030)
chr7 (338-378)||(7401414-7401454)
chr7 (337-392)||(23817190-23817246)
chr7 (181-229)||(35016092-35016140)
chr7 (344-384)||(40200130-40200170)
chr7 (341-377)||(41380911-41380947)
chr7 (338-378)||(48288428-48288468)
[»] scaffold0001 (1 HSPs)
scaffold0001 (174-238)||(428281-428346)
[»] chr6 (33 HSPs)
chr6 (349-400)||(14709024-14709076)
chr6 (338-396)||(6419090-6419149)
chr6 (335-399)||(361163-361228)
chr6 (344-384)||(8374405-8374445)
chr6 (349-396)||(19892284-19892332)
chr6 (344-395)||(20728960-20729012)
chr6 (338-396)||(978142-978201)
chr6 (338-396)||(3294767-3294826)
chr6 (338-396)||(3794181-3794240)
chr6 (338-396)||(4408361-4408420)
chr6 (338-396)||(9246390-9246449)
chr6 (338-396)||(9372209-9372268)
chr6 (338-396)||(9435629-9435688)
chr6 (338-400)||(12284124-12284187)
chr6 (338-396)||(17454753-17454812)
chr6 (338-396)||(22997339-22997398)
chr6 (338-396)||(23791003-23791062)
chr6 (338-385)||(29284269-29284316)
chr6 (338-396)||(31802056-31802115)
chr6 (338-400)||(32049969-32050032)
chr6 (338-395)||(15091451-15091509)
chr6 (338-384)||(27094828-27094874)
chr6 (348-396)||(3795782-3795831)
chr6 (348-396)||(6210067-6210116)
chr6 (337-378)||(15285545-15285586)
chr6 (344-396)||(28222872-28222925)
chr6 (338-378)||(13732815-13732855)
chr6 (170-229)||(20969795-20969855)
chr6 (181-229)||(21208158-21208206)
chr6 (337-385)||(28030866-28030914)
chr6 (338-378)||(28237279-28237319)
chr6 (349-396)||(30704974-30705022)
chr6 (337-396)||(31935101-31935161)
[»] scaffold0006 (2 HSPs)
scaffold0006 (349-395)||(59188-59234)
scaffold0006 (175-222)||(178394-178442)
[»] scaffold0121 (1 HSPs)
scaffold0121 (338-396)||(46529-46588)
[»] scaffold0088 (1 HSPs)
scaffold0088 (338-396)||(10834-10893)
[»] scaffold0050 (1 HSPs)
scaffold0050 (115-214)||(34443-34542)
[»] scaffold0031 (1 HSPs)
scaffold0031 (338-400)||(50005-50068)
[»] scaffold0025 (1 HSPs)
scaffold0025 (337-384)||(65808-65855)
[»] scaffold1709 (1 HSPs)
scaffold1709 (339-396)||(175-233)
[»] scaffold1331 (1 HSPs)
scaffold1331 (339-396)||(88-146)
[»] scaffold0330 (1 HSPs)
scaffold0330 (344-382)||(6777-6815)
[»] scaffold0275 (1 HSPs)
scaffold0275 (338-396)||(8824-8882)
[»] scaffold0460 (1 HSPs)
scaffold0460 (348-396)||(12472-12521)
[»] scaffold0281 (1 HSPs)
scaffold0281 (174-238)||(22273-22338)
[»] scaffold0166 (1 HSPs)
scaffold0166 (104-161)||(7625-7681)
[»] scaffold0038 (2 HSPs)
scaffold0038 (344-396)||(23370-23423)
scaffold0038 (338-378)||(37441-37481)
[»] scaffold0690 (1 HSPs)
scaffold0690 (338-378)||(3669-3709)
[»] scaffold0028 (1 HSPs)
scaffold0028 (338-378)||(112111-112151)


Alignment Details
Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 54150994 - 54150834
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  54150994 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtgttaaatgaaattcatacaaaaaa 54150895  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcactt 173  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  54150894 tgaagagagagaaggtccttatataaacacccttctctataagcaccaataaatatcactt 54150834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 5419009 - 5418802
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacaca-aaaa 111  Q
    ||||||||||||||| || |||||| |||||||||||||||||| ||| |||||||||||||||| |||||||| ||||||| |||||||||||| ||||    
T  5419009 aaaatttactaataggtctcactaataactctatattattacatctcttaaacactcatttattttattagaaaatattaaacgaaattcacacacaaaa 5418910  T
Q  112 atgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggggtgcctatttagctcggtgctaaataggt 211  Q
    |||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5418909 atgaagagagagaaggtccttatataaacacccttgtatataagcaccaataaatatcactccacaatggggtgcctatttagctcggtgctaaataggt 5418810  T
Q  212 gaagcacc 219  Q
    ||| ||||    
T  5418809 gaaacacc 5418802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 17450703 - 17450918
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||| |||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| | ||||||||||| ||||    
T  17450703 aaaatttattaataggttccactaataactctatattattacatttttaaaacactcatttatttcattaaaaaatattaattcaaattcacacataaaa 17450802  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaat-ggggtgcctatttagctcggtgctaaataggt 211  Q
    |||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||| |||||| ||| |||||||||||| || |||| |||||||    
T  17450803 tgaagagagagaaggtgcttatatagggacccttctctataagcaccaataaatatcactccacaatagggatgcctatttagcccgatgctgaataggt 17450902  T
Q  212 gaagcacccaccattg 227  Q
    ||||||||||||||||    
T  17450903 gaagcacccaccattg 17450918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 25197400 - 25197526
Alignment:
Q  104 cacaaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatgggg-tgcctatttagctcggtgc 202  Q
    |||||||| |||||||||||| |||||||  |||| || | ||||||||||||||| | | ||   ||| |||||||||| |||| |||||   |||| |    
T  25197400 cacaaaaagtgaagagagagagggtccttccatagccaccattctctataagcacctaaatattatactccacaatgggggtgccaatttattacggttc 25197499  T
Q  203 taaataggtgaagcacccaccattgtg 229  Q
    |||||||||||||||||||||||||||    
T  25197500 taaataggtgaagcacccaccattgtg 25197526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 46433186 - 46433310
Alignment:
Q  105 acaaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggggtgcctatttagctcggtgcta 204  Q
    |||||||||||||||||||| ||| |||  ||||  | ||||||| ||| ||||| ||| ||||  || ||||||||||| ||||||||    |||||||    
T  46433186 acaaaaaatgaagagagagagggtgcttccatagctacccttctccataggcacccatatatattgctccacaatggggtacctatttaaagtggtgcta 46433285  T
Q  205 aataggtgaagcacccaccattgtg 229  Q
    ||||||| ||||||||| |||||||    
T  46433286 aataggttaagcacccatcattgtg 46433310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 47890698 - 47890757
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  47890698 gtgagttaaactcagttggtagagatattgcatattatatgcaggggtcggggttcgaac 47890757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 400
Target Start/End: Original strand, 42395229 - 42395293
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    |||||| ||| || ||||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  42395229 tgtgagcttagcttagttggtagggatattgcatattatatgtaggggccggggttcgaactccg 42395293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 402
Target Start/End: Original strand, 52798281 - 52798345
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaactccgta 402  Q
    ||||| |||||||||||||||| | |||||||||||||||| || | |||||||||||| |||||    
T  52798281 gtgagcttaactcagttggtagggatattgcatattatatgcagagtcggggttcgaaccccgta 52798345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 229907 - 229792
Alignment:
Q  115 aagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatg-gggtgcctatttagctcggtgctaaataggtga 213  Q
    |||||||||| ||| ||||||||  || |||||||||||||||||||  |   || || ||||| | |||||| |||| |  ||||| ||||||||||||    
T  229907 aagagagagagggtgcttatataaccacccttctctataagcaccaaacacattctctccacaaggagggtgcttattaatttcggtactaaataggtga 229808  T
Q  214 agcacccaccattgtg 229  Q
    ||||||||||||||||    
T  229807 agcacccaccattgtg 229792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 10402444 - 10402503
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||    
T  10402444 gtgagcttaactcagttggtagagatattgcatattatatgcaggggtcggagttcgaac 10402503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 13578532 - 13578473
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  13578532 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 13578473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 19594236 - 19594283
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  19594236 gtgagcttaactcagttgatagagatattgcatattatatgtaggggc 19594283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 28992685 - 28992740
Alignment:
Q  174 cacaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||||||| ||||||||   ||||||||||||||||||||||||| ||||||    
T  28992685 cacaatggggtgtctatttagtatggtgctaaataggtgaagcacccacaattgtg 28992740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 229
Target Start/End: Complemental strand, 56192360 - 56192220
Alignment:
Q  88 tattaaatgaaattcacacaaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatgggg-tgc 186  Q
    |||||||||||| |||||  ||||||| ||||||||| ||| |||  |||| || |||||||||||  |||| ||| || | ||| ||||| |||| |||    
T  56192360 tattaaatgaaactcaca--aaaaatggagagagagagggtgctttcatagccacccttctctatagacacccatatattttactccacaacgggggtgc 56192263  T
Q  187 ctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||    |||| ||||||||| |||||||||||||||||    
T  56192262 ctatttaatgtggtgttaaataggtaaagcacccaccattgtg 56192220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 12267526 - 12267568
Alignment:
Q  343 tttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  12267526 tttagctcagttggtagagatattgcatattatatgtaggggc 12267568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 12678511 - 12678557
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  12678511 tgagtttgactcagttggtagagatattgcatattatatgcaggggc 12678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 384
Target Start/End: Original strand, 37310030 - 37310076
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||    
T  37310030 gtgagtttaactcagttggtatggatattgcatattatatgtagggg 37310076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 37935864 - 37935926
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactcc 399  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| ||||||||||||||    
T  37935864 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaactcc 37935926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 12832484 - 12832525
Alignment:
Q  198 ggtgctaaataggtgaagcacccaccattgt-gatggtctta 238  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  12832484 ggtgctaaataggtgaagcacccaccattgtagatggtctta 12832525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 16529885 - 16529836
Alignment:
Q  180 ggggtgcctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||    
T  16529885 ggggtgcctatttaatgtggtgctaaataggtgaagcacccaccattgtg 16529836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 42218763 - 42218816
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactccg 400  Q
    |||||||||||| | |||||||||||||| |||||||| |||||||||||||||    
T  42218763 ctcagttggtagggatattgcatattatacgtaggggctggggttcgaactccg 42218816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 38228451 - 38228503
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    ||||||||||| | |||||||| ||||||||||||| ||||||||||||||||    
T  38228451 tcagttggtagggatattgcatgttatatgtaggggccggggttcgaactccg 38228503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 48085446 - 48085414
Alignment:
Q  197 cggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||||||||||||||||||||||||||||    
T  48085446 cggtgctaaataggtgaagcacccaccattgtg 48085414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 56479287 - 56479235
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||||||||||||| | |||||||||||||||| |||||  ||||||||||    
T  56479287 ttaactcagttggtagggatattgcatattatatgcaggggtcgggttcgaac 56479235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 3036122 - 3036075
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||||    
T  3036122 gtgagcttaactcagttggtagggatattgcatattatatgcaggggc 3036075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 5165860 - 5165919
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | ||| |||||||||||| ||||| ||||||||||||    
T  5165860 gtgagcttaactcagttggtagggatatcgcatattatatgcaggggccggggttcgaac 5165919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 7686329 - 7686270
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||||| |||||||| ||||||| ||||| ||||||||||||    
T  7686329 gtgagcttagctcagttggtagagatattgcattttatatgcaggggccggggttcgaac 7686270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 8965097 - 8965156
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  8965097 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 8965156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 12167677 - 12167619
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtag--gggcggggttcgaactccg 400  Q
    |||||||||||||||| | |||||||||||||||| ||  || ||||||||||||||||    
T  12167677 ttaactcagttggtagggatattgcatattatatgcaggaggccggggttcgaactccg 12167619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 26919535 - 26919472
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactccg 400  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| || |||||||||||||||    
T  26919535 gtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaactccg 26919472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 31852680 - 31852621
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | ||||||||||||||||||||||  |||||||||||    
T  31852680 gtgagcttatctcagttggtagggttattgcatattatatgtaggggttggggttcgaac 31852621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 39023178 - 39023237
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  39023178 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 39023237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 40051625 - 40051684
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | ||||||||||||||||||||||  |||||||||||    
T  40051625 gtgagcttagctcagttggtagggatattgcatattatatgtaggggtaggggttcgaac 40051684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 229
Target Start/End: Original strand, 43407342 - 43407373
Alignment:
Q  198 ggtgctaaataggtgaagcacccaccattgtg 229  Q
    ||||||||||||||||||||||||||||||||    
T  43407342 ggtgctaaataggtgaagcacccaccattgtg 43407373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 43978011 - 43978070
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  43978011 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 43978070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 48569243 - 48569184
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  48569243 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 48569184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 49901485 - 49901544
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  49901485 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 49901544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 50376716 - 50376657
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||||||||||||||||  |||||||| |||||| |||||  |||||||||||    
T  50376716 gtgagtttaactcagttggtagagacattgcataatatatgcaggggaaggggttcgaac 50376657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 55853175 - 55853128
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| ||| |||||||||||||| |||||||||||||||| ||||||    
T  55853175 gtgagcttagctcagttggtagagatattgcatattatatgcaggggc 55853128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 481599 - 481553
Alignment:
Q  351 agttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||    
T  481599 agttggtagagatattgcatattatatgtaggggttggggttcgaac 481553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 24680153 - 24680091
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactcc 399  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| | ||||||||||||    
T  24680153 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctgaggttcgaactcc 24680091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 26868352 - 26868410
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| || ||||||||||    
T  26868352 gtgagcttagctcagttggtagggatattgcatattatatgcaggagccgggttcgaac 26868410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 36755240 - 36755118
Alignment:
Q  108 aaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatgg-ggtgcctatttagctcggtgctaaa 206  Q
    ||||||||||||||||| ||| |||  |||| || ||||||| |||  |||| ||| ||   ||| |||||||| |||| |||||||    |||||||||    
T  36755240 aaaaatgaagagagagagggtgcttccatagccacccttctccatagccacccatatattatactccacaatggaggtgtctatttaatatggtgctaaa 36755141  T
Q  207 taggtgaagcacccaccattgtg 229  Q
    ||| |||||||||||||||||||    
T  36755140 tagatgaagcacccaccattgtg 36755118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 39696404 - 39696346
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||| |  ||||||||||    
T  39696404 gtgagcttagctcagttggtagggatattgcatattatatgtaggagtcgggttcgaac 39696346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 400
Target Start/End: Complemental strand, 42134523 - 42134461
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatg-taggggcggggttcgaactccg 400  Q
    |||| ||||||||||| |||| | ||||||||||||||||  |||| ||||||||||||||||    
T  42134523 tgagcttaactcagttagtagggatattgcatattatatgcaagggtcggggttcgaactccg 42134461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 627050 - 627009
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    |||||||||| |||||||||||| | ||||||||||||||||    
T  627050 tgtgagtttagctcagttggtagggatattgcatattatatg 627009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 4357895 - 4357932
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  4357895 ctcagttggtagagatattgtatattatatgtaggggc 4357932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 8144648 - 8144599
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||||| |||| | ||||||||||||||||||||||| |||||||||||    
T  8144648 ctcagtttgtagggatattgcatattatatgtaggggctggggttcgaac 8144599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 21935490 - 21935539
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  21935490 ctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 21935539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 38476325 - 38476366
Alignment:
Q  198 ggtgctaaataggtgaagcacccaccattgt-gatggtctta 238  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  38476325 ggtgctaaataggtgaagcacccaccattatagatggtctta 38476366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 42381170 - 42381121
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||| | |||||||| ||||||||||||| ||||||||||||    
T  42381170 ctcagttggtagggatattgcatgttatatgtaggggtcggggttcgaac 42381121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 400
Target Start/End: Complemental strand, 44195694 - 44195629
Alignment:
Q  335 catgtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaactccg 400  Q
    |||||||  |||| ||||||||||| | |||||||| ||||||| |||| ||||||||||| ||||    
T  44195694 catgtgaacttaattcagttggtagggatattgcattttatatgcagggtcggggttcgaattccg 44195629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 46582636 - 46582677
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    |||||||||| |||||||||||| | ||||||||||||||||    
T  46582636 tgtgagtttagctcagttggtagggatattgcatattatatg 46582677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 377
Target Start/End: Complemental strand, 922312 - 922276
Alignment:
Q  341 agtttaactcagttggtagagctattgcatattatat 377  Q
    |||||| |||||||||||||| |||||||||||||||    
T  922312 agtttagctcagttggtagaggtattgcatattatat 922276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 380
Target Start/End: Complemental strand, 18424958 - 18424922
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgta 380  Q
    |||||||||||||||| | ||||||||||||||||||    
T  18424958 ttaactcagttggtagggatattgcatattatatgta 18424922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 35851770 - 35851722
Alignment:
Q  336 atgtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    ||||||| |||||||||||||||| |  |||||||| ||||||||||||    
T  35851770 atgtgagcttaactcagttggtagggacattgcataatatatgtagggg 35851722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 37182697 - 37182737
Alignment:
Q  199 gtgctaaataggtgaagcacccaccattgt-gatggtctta 238  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  37182697 gtgctaaataggtgaaacacccaccattgtggatggtctta 37182737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 40994170 - 40994126
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg 382  Q
    ||||| ||| |||||||||||| | ||||||||||||||||||||    
T  40994170 gtgagcttagctcagttggtagggatattgcatattatatgtagg 40994126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 42073172 - 42073220
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||| ||||||||| |||||||| |||||||||||| | ||||||||||    
T  42073172 ctcacttggtagagatattgcattttatatgtagggtccgggttcgaac 42073220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 46582381 - 46582345
Alignment:
Q  363 tattgcatattatatgtaggggcggggttcgaactcc 399  Q
    ||||||||||||||||||||  |||||||||||||||    
T  46582381 tattgcatattatatgtaggatcggggttcgaactcc 46582345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 5e-66; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 37104073 - 37104252
Alignment:
Q  47 attattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaatgaagagagagaaggtccttatatagacatcctt 146  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||| | |||||||||||| ||||    
T  37104073 attattacatttctaaaacactcatttatttcattggaaaatattaattgaaattcacacataaaatgaagagagagaagatgcttatatagacaccctt 37104172  T
Q  147 ctctataagcaccaataaatatcacttcacaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccatt 226  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||| |||||||||| |||||||||||    
T  37104173 ctctataagcaccaataaatatcactccacgatagggtgcctatttagcccggtgcttaataggtgaaacacccaccatt 37104252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 48085604 - 48085492
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||| |||||||     
T  48085604 aaaatttattaatagatcccattaataactctatattattacatttttaaaacactcatttatttcattataaaatattaaataaaattcaaacaaaaat 48085505  T
Q  113 tgaagagagagaa 125  Q
    | |||||||||||    
T  48085504 taaagagagagaa 48085492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 48082465 - 48082370
Alignment:
Q  134 tatagacatccttctctataagcaccaataaatatcacttcacaatgg-ggtgcctatttagctcggtgctaaataggtgaagcacccaccattgt 228  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| |||| || ||||| ||||||||||| ||||||||    
T  48082465 tataggcatccttctctataaacaccaataaatatcactttacaatggaggtgcctatttaactcgatgttaaattggtgaagcacctaccattgt 48082370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 337 - 396
Target Start/End: Complemental strand, 53432805 - 53432745
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  53432805 tgtgagtttaactcagttggtagggatattgcatattatatgcaggggccggggttcgaac 53432745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 45073463 - 45073349
Alignment:
Q  107 aaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatgg-ggtgcctatttagctcggtgctaa 205  Q
    |||||||||||||| |||| ||||||||| |  || |||||||||||||||||   ||||||||||  |||||||  | ||||||||| | || ||||||    
T  45073463 aaaaaatgaagagaaagaacgtccttatacatgcacccttctctataagcaccttaaaatatcactctacaatggatgcgcctatttaacacgatgctaa 45073364  T
Q  206 ataggtgaagcaccc 220  Q
    ||||||||| |||||    
T  45073363 ataggtgaaacaccc 45073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 25938997 - 25938938
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  25938997 gtgagtttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 25938938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 34847546 - 34847609
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    ||||| |||| ||||||||||| | |||||||||||||||| ||||| ||||||||||||||||    
T  34847546 gtgagcttaattcagttggtagggatattgcatattatatgcaggggtcggggttcgaactccg 34847609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 39719938 - 39719997
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  39719938 gtgagtttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 39719997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 53163597 - 53163656
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  53163597 gtgagcttagctcagttggtagggatattgcatattatatgtaggggccggggttcgaac 53163656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 20936126 - 20936212
Alignment:
Q  107 aaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggggtgcctattta 193  Q
    |||||||||||||||||| ||| |||  |||| || ||||||| ||| ||||| ||| |||| ||| ||||||||||| ||||||||    
T  20936126 aaaaaatgaagagagagagggtgcttccatagccacccttctccataggcacctatatatattactccacaatggggtacctattta 20936212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 4200646 - 4200593
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  4200646 ttaactcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 4200593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 25638450 - 25638397
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||| ||||||||| |||||||||||||||||||||| || |||||||||    
T  25638450 ttaactcaattggtagagatattgcatattatatgtaggggtcgaggttcgaac 25638397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 29098701 - 29098754
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||    
T  29098701 ttaactcagttggtagagatattgtatattatatgcaggggtcggggttcgaac 29098754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 42496435 - 42496378
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||||| || ||||||||||  ||||||||||||||||||||||  ||||||||||    
T  42496435 tgagtttagcttagttggtagaaatattgcatattatatgtaggggtcgggttcgaac 42496378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 12894597 - 12894537
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtag-gggcggggttcgaact 397  Q
    ||||| |||||||||||||||| | |||||||| |||||||||| || |||||||||||||    
T  12894597 gtgagcttaactcagttggtagggatattgcattttatatgtagaggccggggttcgaact 12894537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 22472381 - 22472341
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  22472381 gtgagcttaactcagttggtagagatattgcatattatatg 22472341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 25833836 - 25833884
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||||||||| || |||||||||||||||| ||| |||||||||||||    
T  25833836 ctcagttggtaaagatattgcatattatatgcaggagcggggttcgaac 25833884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 44364024 - 44364064
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  44364024 gtgagtttaactcagttggtagggatattgcatattatatg 44364064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 51772891 - 51772951
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||| |||||| ||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  51772891 tgtgagcttaacttagttggtagggatattgcatattatatgcaggggtcggggttcgaac 51772951  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 1743864 - 1743805
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||| ||||||| | |||||||| ||||||||||||| ||||||||||||    
T  1743864 gtgagcttaactcaattggtagggatattgcattttatatgtaggggccggggttcgaac 1743805  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 7269958 - 7270021
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactccg 400  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| || |||||||||||||||    
T  7269958 gtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaactccg 7270021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 7938363 - 7938304
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||| ||| ||||||||||||| ||||||||||||    
T  7938363 gtgagcttaactcagttggtagggatattacattttatatgtaggggtcggggttcgaac 7938304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 8964843 - 8964780
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaactccg 400  Q
    ||||||||| |||||||||||| | |||||||||| ||||| ||| | ||||||||||||||||    
T  8964843 gtgagtttagctcagttggtagggatattgcatatcatatgcaggagccggggttcgaactccg 8964780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 17602743 - 17602696
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||||    
T  17602743 gtgagcttagctcagttggtagggatattgcatattatatgtaggggc 17602696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 17608386 - 17608327
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||| ||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  17608386 gtgagcttaacttagttggtagggatattgcatattatatgcaggggccggggttcgaac 17608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 18194341 - 18194400
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  18194341 gtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 18194400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 19999870 - 19999929
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  19999870 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 19999929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 22501998 - 22501939
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  22501998 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 22501939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 229
Target Start/End: Original strand, 26952600 - 26952631
Alignment:
Q  198 ggtgctaaataggtgaagcacccaccattgtg 229  Q
    ||||||||||||||||||||||||||||||||    
T  26952600 ggtgctaaataggtgaagcacccaccattgtg 26952631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 29373516 - 29373457
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||  | |||||||||||||||| ||||| ||||||||||||    
T  29373516 gtgagcttaactcagttggtaaggatattgcatattatatgcaggggccggggttcgaac 29373457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 29559740 - 29559681
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtag-gggcggggttcgaact 397  Q
    |||| |||||||||||||||| | ||||||||||||||||||| || ||||||| |||||    
T  29559740 tgagcttaactcagttggtagggatattgcatattatatgtagaggtcggggtttgaact 29559681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 30779634 - 30779575
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  30779634 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 30779575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 229
Target Start/End: Complemental strand, 37333211 - 37333180
Alignment:
Q  198 ggtgctaaataggtgaagcacccaccattgtg 229  Q
    ||||||||||||||||||||||||||||||||    
T  37333211 ggtgctaaataggtgaagcacccaccattgtg 37333180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 45871020 - 45871079
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||| |||||||||||| | ||||| |||||||||| ||||| ||||||||||||    
T  45871020 gtgagtttagctcagttggtagggatattgtatattatatgcaggggtcggggttcgaac 45871079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 47098735 - 47098794
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  47098735 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 47098794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 48546176 - 48546235
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggg-gcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||  ||||||||||||    
T  48546176 gtgagcttagctcagttggtagtgatattgcatattatatgtagggatcggggttcgaac 48546235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 52945898 - 52945957
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  52945898 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 52945957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 52974120 - 52974061
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  52974120 gtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaac 52974061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 227
Target Start/End: Complemental strand, 1765648 - 1765618
Alignment:
Q  197 cggtgctaaataggtgaagcacccaccattg 227  Q
    |||||||||||||||||||||||||||||||    
T  1765648 cggtgctaaataggtgaagcacccaccattg 1765618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 377
Target Start/End: Complemental strand, 29496172 - 29496134
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatat 377  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  29496172 tgagtttaactcagttggtagggatattgcatattatat 29496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 10482910 - 10482857
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactccg 400  Q
    |||||||||||| | |||||||||||||||| ||| || |||||||||||||||    
T  10482910 ctcagttggtagggatattgcatattatatgcaggagctggggttcgaactccg 10482857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 385
Target Start/End: Original strand, 11436513 - 11436554
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||||||||||||||| | |||||||||||||||| ||||||    
T  11436513 ttaactcagttggtagggatattgcatattatatgcaggggc 11436554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 41936464 - 41936415
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  41936464 ctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 41936415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 394
Target Start/End: Complemental strand, 50536899 - 50536842
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcga 394  Q
    ||||| ||| |||||||||||||| |||||||||||||||| ||| | ||||||||||    
T  50536899 gtgagcttagctcagttggtagagatattgcatattatatgcaggtgtcggggttcga 50536842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 396
Target Start/End: Complemental strand, 54021404 - 54021343
Alignment:
Q  335 catgtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||||| ||| |||||||||||  | |||||||||||||||| |||| ||| ||||||||    
T  54021404 catgtgagcttagctcagttggtatggatattgcatattatatgcagggccggagttcgaac 54021343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 396
Target Start/End: Complemental strand, 5636867 - 5636807
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    |||||| ||| |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  5636867 tgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 5636807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 13638301 - 13638253
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||||||||| | |||| |||||||||||||||||| |||||||||||    
T  13638301 tcagttggtagggatattacatattatatgtaggggctggggttcgaac 13638253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 15975154 - 15975214
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    |||||| ||| |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  15975154 tgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 15975214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 381
Target Start/End: Original strand, 25363575 - 25363619
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtag 381  Q
    |||||||||||||||||| |||  | |||||||||||||||||||    
T  25363575 tgtgagtttaactcagtttgtaaggatattgcatattatatgtag 25363619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 34102667 - 34102619
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  34102667 tcagttggtagggatattgcatattatatgcaggggccggggttcgaac 34102619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 39169764 - 39169823
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||| ||||||||||| |||||| ||||||||| |||||| ||||| ||||||||||||    
T  39169764 tgtgagcttaactcagttagtagagatattgcata-tatatgcaggggccggggttcgaac 39169823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 45073518 - 45073466
Alignment:
Q  18 ttactaatagatcccactaaaaactctatattattacatttctaaaacactca 70  Q
    |||||||||| |||   ||| ||||||||||||||||||||||||||| ||||    
T  45073518 ttactaataggtcctgttaataactctatattattacatttctaaaacgctca 45073466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 45198737 - 45198773
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||||||||| | |||||||||||||||||||||||    
T  45198737 tcagttggtagggatattgcatattatatgtaggggc 45198773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 46310765 - 46310725
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatat 377  Q
    ||||||||||||||||||||||||| ||||| || ||||||    
T  46310765 tgtgagtttaactcagttggtagagatattgtatgttatat 46310725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 2e-62; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 13125377 - 13125160
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||| |||||   |||||||| ||||| ||||||||||||||  |||||||||||||||||||||  ||| |||||| ||||||||||| | ||||    
T  13125377 aaaatttattaatatgccccactaataactcaatattattacatttacaaaacactcatttatttcattgaaaaatattaattgaaattcacatataaaa 13125278  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaat-ggggtgcctatttagctcggtgctaaataggt 211  Q
    |||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||| || |||| |||||||    
T  13125277 tgaagagagagaaggtgcttatatagacatccttctttataaacaccaataaatatcactccacaatgggggtgcctatttagcccgatgcttaataggt 13125178  T
Q  212 gaagcacccaccattgtg 229  Q
    ||| ||||||||||||||    
T  13125177 gaaacacccaccattgtg 13125160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 8851656 - 8851425
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattatt---acatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacac-aa 108  Q
    ||||||||||||||| ||||||||| | |||| | || ||   ||||||||||||||||||||||||| | |||||| ||||||| |||||| |||| ||    
T  8851656 aaaatttactaataggtcccactaatatctctttttttttgttacatttctaaaacactcatttattttactagaaaatattaaacgaaatttacacaaa 8851557  T
Q  109 aaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatgg-ggtgcctatttagctcggtgctaaat 207  Q
    ||||| ||||||||||||||| |||||||| || |||| ||||| ||||||||||||||| ||| || ||||| | || ||||||| |||||||||| ||    
T  8851556 aaaataaagagagagaaggtctttatataggcacccttttctatcagcaccaataaatattactccataatggagatgtctatttaactcggtgctatat 8851457  T
Q  208 aggtgaagcacccaccattgt-gatggtctta 238  Q
    ||| ||||||||||||||| | ||||||||||    
T  8851456 aggcgaagcacccaccattatggatggtctta 8851425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 23339963 - 23339904
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  23339963 gtgagcttaactcagttggtagagatattgtatattatatgtaggggccggggttcgaac 23339904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 14582505 - 14582448
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||||||||||||||| ||| | |||||||||||||||| |||| ||||||||||||    
T  14582505 tgagtttaactcagttgttagggatattgcatattatatggagggtcggggttcgaac 14582448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 10030414 - 10030474
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    |||||||||| |||||||||||||| |||||||||||||||| ||| | ||||||||||||    
T  10030414 tgtgagtttagctcagttggtagagatattgcatattatatgcaggtgccggggttcgaac 10030474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 8034479 - 8034420
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  8034479 gtgagcttaactcagttggtagggatattgcatattatatgcaggggccggggttcgaac 8034420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 31451024 - 31450961
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaactccg 400  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||| | ||||||||||||||||    
T  31451024 gtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaactccg 31450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 42880951 - 42881010
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||||||| | ||||||||||||    
T  42880951 gtgagcttaactcagttggtagggatattgcatattatatgtaggagccggggttcgaac 42881010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 43656039 - 43656098
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  43656039 gtgagcttagctcagttggtagggatattgcatattatatgtaggggtcggggttcgaac 43656098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 27879045 - 27878978
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcatta 82  Q
    |||||||||||||||||| |||||| || |  |||||||||||||| |||||  ||||||||||||||||    
T  27879045 aaaatttactaatagatctcactaataaat--atattattacatttttaaaatgctcatttatttcatta 27878978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28019226 - 28019159
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcatta 82  Q
    |||||||||||||||||| |||||| || |  |||||||||||||| |||||  ||||||||||||||||    
T  28019226 aaaatttactaatagatctcactaataaat--atattattacatttttaaaatgctcatttatttcatta 28019159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 43403296 - 43403342
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||| |||| ||||||||||||| |||||||||||||||||||||||    
T  43403296 tgagcttaattcagttggtagagatattgcatattatatgtaggggc 43403342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 44089021 - 44088963
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaact 397  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||   |||||||||||    
T  44089021 tgagtttagctcagttggtagagatattgcatgttatatgtagggtaagggttcgaact 44088963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 13773449 - 13773400
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  13773449 ctcagttggtagagatattgcatattatatgtaggagccggggttcgaac 13773400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 41458298 - 41458351
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggtt 391  Q
    ||||| |||||||||||||||| | |||||||||||||||| |||||| |||||    
T  41458298 gtgagcttaactcagttggtagggatattgcatattatatgcaggggctgggtt 41458351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 1937313 - 1937372
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  1937313 gtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaac 1937372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 7453355 - 7453414
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||| ||||| |||||| | |||||||| ||||||||||||| ||||||||||||    
T  7453355 gtgagtttagctcagctggtagggatattgcattttatatgtaggggccggggttcgaac 7453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 10083166 - 10083225
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||| || |||||||||    
T  10083166 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcgaggttcgaac 10083225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 10200748 - 10200689
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||||| |||||||||||||||| ||| | ||||||||||||    
T  10200748 gtgagcttagctcagttggtagagatattgcatattatatgcaggagccggggttcgaac 10200689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 10573104 - 10573163
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| |||||  |||||||||||    
T  10573104 gtgagtttagctcagttggtagggatattgcatattatatgcaggggttggggttcgaac 10573163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 23178958 - 23178899
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  23178958 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 23178899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 26022250 - 26022309
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  26022250 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 26022309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 395
Target Start/End: Complemental strand, 27077165 - 27077106
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaa 395  Q
    |||||| ||| |||||||||||| | |||||||||||||||| ||||| |||||||||||    
T  27077165 tgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaa 27077106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 33617975 - 33618034
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||| ||| ||||||||    
T  33617975 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcggtgttcgaac 33618034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 34158724 - 34158665
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  34158724 gtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaac 34158665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 36540290 - 36540349
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||| ||||||| ||||| ||||||||||||    
T  36540290 gtgagcttaactcagttggtagggatattgcattttatatgcaggggtcggggttcgaac 36540349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 37047018 - 37047061
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtag 381  Q
    ||||||||| | |||||||||||| |||||||||||||||||||    
T  37047018 gtgagtttatcacagttggtagagatattgcatattatatgtag 37047061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 37090680 - 37090621
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    |||||||||||||||||||||| | ||||| |||||||||| ||| | ||||||||||||    
T  37090680 gtgagtttaactcagttggtagggatattgtatattatatgcaggagtcggggttcgaac 37090621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 37717366 - 37717425
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  37717366 gtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaac 37717425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 38344052 - 38344111
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||| || |||||||||||    
T  38344052 gtgagcttaactcagttggtagggatattgcatattatatgcaggagctggggttcgaac 38344111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 38955261 - 38955202
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||| ||||||||||| ||||| ||||||||||||    
T  38955261 gtgagcttaactcagttggtagggatattacatattatatgcaggggccggggttcgaac 38955202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 43284033 - 43283974
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  43284033 gtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 43283974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 43856449 - 43856390
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||| ||||||| ||||| ||||||||||||    
T  43856449 gtgagcttaactcagttggtagggatattgcattttatatgcaggggccggggttcgaac 43856390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Original strand, 1342726 - 1342772
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    ||||| |||||||||||||||||| || || ||||||||||||||||    
T  1342726 gtgagcttaactcagttggtagagatactgtatattatatgtagggg 1342772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 3949151 - 3949109
Alignment:
Q  335 catgtgagtttaactcagttggtagagctattgcatattatat 377  Q
    |||||||| |||||||||||||||| | |||||||||||||||    
T  3949151 catgtgagcttaactcagttggtagggatattgcatattatat 3949109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 7186238 - 7186192
Alignment:
Q  183 gtgcctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||||||   |||||||||||| ||||||||||||||||||||    
T  7186238 gtgcctatttaatacggtgctaaatatgtgaagcacccaccattgtg 7186192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Complemental strand, 8698647 - 8698601
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    ||||| ||| |||||||||||| | ||||||||||||||||||||||    
T  8698647 gtgagcttagctcagttggtagggatattgcatattatatgtagggg 8698601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 20164276 - 20164230
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggg 383  Q
    |||||| |||||||||||||||||| |||| ||||||||||| ||||    
T  20164276 tgtgagcttaactcagttggtagagatattacatattatatgcaggg 20164230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 22274677 - 22274619
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    |||||||| |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  22274677 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 22274619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 33838327 - 33838389
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtag-gggcggggttcgaactcc 399  Q
    ||||||||| |||||||||||| | ||||||| |||||||||||  | |||||||||||||||    
T  33838327 gtgagtttagctcagttggtagggatattgcaaattatatgtagaagccggggttcgaactcc 33838389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 44444556 - 44444606
Alignment:
Q  347 actcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  44444556 actcagttggtagggatattgcatattatatgcaggggctggggttcgaac 44444606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 5328624 - 5328575
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  5328624 ctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 5328575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 6148492 - 6148537
Alignment:
Q  198 ggtgctaaataggtgaagcacccaccattgt-gatggtcttagtaa 242  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||    
T  6148492 ggtgttaaataggtgaagcacccaccattgtggatggtctaagtaa 6148537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 6511577 - 6511536
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||| ||||||||||||| |||||||||| ||||||||||||    
T  6511577 ttaattcagttggtagagatattgcatataatatgtaggggc 6511536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 7109347 - 7109310
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  7109347 ctcagttggtagagatattgcatattatatgcaggggc 7109310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 7388464 - 7388521
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    |||||||||||||||| | |||||||||||||||| |||||  ||||||| |||||||    
T  7388464 ttaactcagttggtagggatattgcatattatatgcaggggttggggttcaaactccg 7388521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 7763996 - 7763959
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  7763996 ctcagttggtagagatattgcatattatatgcaggggc 7763959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 24480878 - 24480829
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||||||| ||||| |||||||||| |||||| |||||||||||    
T  24480878 ctcagttggtagagatattgtatattatatgcaggggctggggttcgaac 24480829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 29499591 - 29499644
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactccg 400  Q
    |||||||||||| | |||||||| |||||||||||| | |||||||||||||||    
T  29499591 ctcagttggtagggatattgcatgttatatgtagggtcgggggttcgaactccg 29499644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 32719674 - 32719617
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaa 395  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||  ||||||||||    
T  32719674 gtgagcttagctcagttggtagggatattgcatattatatgcagggttggggttcgaa 32719617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 34894382 - 34894431
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  34894382 ctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 34894431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 8862194 - 8862130
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    |||||| ||| || ||||||||| | |||||||||||||||| ||||| | ||||||||||||||    
T  8862194 tgtgagcttagctaagttggtagggatattgcatattatatgcaggggtcagggttcgaactccg 8862130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 13406603 - 13406643
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  13406603 gtgagcttaactcagttggtagggatattgcatattatatg 13406643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 34472300 - 34472340
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  34472300 gtgagcttaactcagttggtagggatattgcatattatatg 34472340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 41616426 - 41616374
Alignment:
Q  345 taactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||||||| | ||||| |||||||||| ||||| ||||||||||||    
T  41616426 taactcagttggtagggatattgtatattatatgcaggggccggggttcgaac 41616374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 396
Target Start/End: Original strand, 42035342 - 42035398
Alignment:
Q  341 agtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||||||||||||| || || ||||| |||||||||| |||||| |||||||||||    
T  42035342 agtttaactcagttgataaagatattgtatattatatgcaggggctggggttcgaac 42035398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 43186856 - 43186896
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||||||| |||||||||||| | ||||||||||||||||    
T  43186856 gtgagtttagctcagttggtagggatattgcatattatatg 43186896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 13 - 226
Target Start/End: Complemental strand, 30471649 - 30471435
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||| |||||  ||||||||| ||||||| |||||||||||| |  ||||||||||| |||||||| ||| |||||||||||||||||| ||||||    
T  30471649 aaaatttattaatatgtcccactaacaactctaaattattacatttttttaacactcatttctttcattataaaatattaaatgaaattcacaaaaaaaa 30471550  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaat-ggggtgcctatttagctcggtgctaaataggt 211  Q
    |||||||||| || ||| || |||||||| |||| |||||||||||||| ||||||||||||| ||| ||||| |||||||| ||||||| |||||||||    
T  30471549 tgaagagagaaaaagtcattctatagacacccttgtctataagcaccaacaaatatcacttcataatgggggttcctatttaactcggtgttaaataggt 30471450  T
Q  212 gaagcacccaccatt 226  Q
    |||||||||||||||    
T  30471449 gaagcacccaccatt 30471435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 22832213 - 22832346
Alignment:
Q  32 cactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaatgaagagagagaaggtcct 131  Q
    |||||| ||||||||||||||||||||||||| ||||| || |||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  22832213 cactaataactctatattattacatttctaaatcactcgttcatttcaatagaaaatattaaatgaaatttacacaaaaaatgaagagagagaaggtcct 22832312  T
Q  132 tatatagacatccttctctataagcaccaataaa 165  Q
    | || ||||| | |||||||||| ||||||||||    
T  22832313 tctacagacaccattctctataaacaccaataaa 22832346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 22823394 - 22823545
Alignment:
Q  14 aaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaat 113  Q
    |||||||||||| | ||||||||| || |||||||||||||||||| ||| ||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  22823394 aaatttactaattggtcccactaataattctatattattacatttcaaaatcactcgtttatttcaatagaaaatattaaatgaaatttacacaaaaaat 22823493  T
Q  114 gaagagagagaaggtccttatatagacatccttctctataagcaccaataaa 165  Q
    |||||||||||  |||||| ||||| || | |||||||||| ||||||||||    
T  22823494 gaagagagagactgtccttctataggcaccattctctataaacaccaataaa 22823545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 20380007 - 20379927
Alignment:
Q  44 tatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaatgaagagagaga 124  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20380007 tatattattacatttctaaaatactcatttatttcattacaaagtattaaatgaaattcacacaaaaaatgaagagagaga 20379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 20379905 - 20379791
Alignment:
Q  116 agagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatgg-ggtgcctatttagctcggtgctaaataggtgaa 214  Q
    ||||||||||||||||| ||||||||  |||||||||||| |||||||||||||| | || ||||| | ||| |||||| ||| ||||||||||||||||    
T  20379905 agagagagaaggtccttctatagacactcttctctataagaaccaataaatatcagtccataatggagatgcttatttaactcagtgctaaataggtgaa 20379806  T
Q  215 gcacccaccattgtg 229  Q
     || |||||||||||    
T  20379805 acatccaccattgtg 20379791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 40363138 - 40363079
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  40363138 gtgagcttaactcagttggtagggatattgcatattatatgtaggggtcggggttcgaac 40363079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 37352563 - 37352513
Alignment:
Q  335 catgtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  37352563 catgtgagtttaactcagttggtagggatattgcatattatatgcaggggc 37352513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 8245218 - 8245153
Alignment:
Q  143 ccttctctataagcaccaataaatatcacttcac-aatggggtgcctatttagctcggtgctaaat 207  Q
    ||||||||||||||||| |||||||||||| ||| |||| |||  |||||||||||||||||||||    
T  8245218 ccttctctataagcacccataaatatcactccacaaatgaggtatctatttagctcggtgctaaat 8245153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 840322 - 840377
Alignment:
Q  175 acaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccattgtga 230  Q
    |||||||||||||||||||    |||||||| ||||||||||||||||||||||||    
T  840322 acaatggggtgcctatttaatgtggtgctaagtaggtgaagcacccaccattgtga 840377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 8742891 - 8742832
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  8742891 gtgagcttagctcagttggtagagatattacatattatatgtaggggctggggttcgaac 8742832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 43994344 - 43994221
Alignment:
Q  104 cacaaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatg-gggtgcctatttagctcggtgc 202  Q
    |||||||| | |||||||||| ||| ||||||||| || ||||||||||||| |||||  | | || ||  |||| | |||||| |||| |  |||||||    
T  43994344 cacaaaaattaaagagagagagggtgcttatatagccacccttctctataagtaccaaacattttctctctacaacgagggtgcttattaatttcggtgc 43994245  T
Q  203 taaataggtgaagcacccaccatt 226  Q
    |||||| |||||||||||||||||    
T  43994244 taaataagtgaagcacccaccatt 43994221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 16870303 - 16870348
Alignment:
Q  116 agagagagaaggtccttatatagacatccttctctataagcaccaa 161  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  16870303 agagagagagggtgcttatatagccatccttctctataagcaccaa 16870348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 381
Target Start/End: Original strand, 32168930 - 32168974
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtag 381  Q
    |||||| |||||||||||||||| | |||||||||||||||||||    
T  32168930 tgtgagcttaactcagttggtagggatattgcatattatatgtag 32168974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 32406900 - 32406868
Alignment:
Q  197 cggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||||||||||||||||||||||||||||    
T  32406900 cggtgctaaataggtgaagcacccaccattgtg 32406868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 33041930 - 33041890
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  33041930 gtgagtttaactcagttggtagggatattgcatattatatg 33041890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 33816480 - 33816424
Alignment:
Q  341 agtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||| |||||||||||||| |||||||||||||||| ||||| |||| |||||||    
T  33816480 agtttacctcagttggtagagatattgcatattatatgcaggggtcgggtttcgaac 33816424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 396
Target Start/End: Complemental strand, 38179313 - 38179253
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||| |||||||||||| | |||||||| ||||||| |||||| |||||||||||    
T  38179313 tgtgagtttagctcagttggtagggatattgcattttatatgcaggggctggggttcgaac 38179253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 4562819 - 4562760
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  4562819 gtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 4562760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 8250368 - 8250309
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  8250368 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 8250309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 9330568 - 9330521
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| |||||||||||| ||||| |||||||||||||||| ||||||    
T  9330568 gtgagcttaactcagttgatagagatattgcatattatatgcaggggc 9330521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 11050824 - 11050761
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactccg 400  Q
    ||||| ||| |||||||||||| | |||| ||||||||||| |||||| |||||||||||||||    
T  11050824 gtgagcttagctcagttggtagggatattacatattatatgcaggggctggggttcgaactccg 11050761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 29772345 - 29772286
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||||| |||||||||| | ||||||||||||||||| ||||| |||||||||||    
T  29772345 gtgagcttaacacagttggtagggatattgcatattatatgtcggggctggggttcgaac 29772286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 32609254 - 32609191
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg-taggggcggggttcgaactccg 400  Q
    ||||| |||||||||||||||| | ||||||||||||||||  || | ||||||||||||||||    
T  32609254 gtgagcttaactcagttggtagggatattgcatattatatgcaagagtcggggttcgaactccg 32609191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 33229000 - 33228941
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  33229000 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 33228941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 33669739 - 33669786
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| ||||||||||| |||| | |||||||||||||||||||||||    
T  33669739 gtgagcttaactcagttagtagggatattgcatattatatgtaggggc 33669786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 34613982 - 34614041
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  34613982 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 34614041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 2806568 - 2806510
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | ||||| ||||||||||||||||  ||||||||||    
T  2806568 gtgagcttagctcagttggtagggatattgtatattatatgtaggggtcgggttcgaac 2806510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Original strand, 5062300 - 5062346
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    ||||| |||||||||||||||| | ||||||||||||||| ||||||    
T  5062300 gtgagcttaactcagttggtagggatattgcatattatatatagggg 5062346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 18278484 - 18278426
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaa 395  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||| | |||||||||||    
T  18278484 gtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaa 18278426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 29942196 - 29942142
Alignment:
Q  335 catgtgagtttaactcagttggtagagctattgcatattatatgtaggggcgggg 389  Q
    |||||||| ||||||||||| |||| | |||||||||||||||| || |||||||    
T  29942196 catgtgagcttaactcagttagtagggatattgcatattatatgcagaggcgggg 29942142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 30392898 - 30392840
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    |||| ||| |||||||||||| | |||||||||||||||||||| | ||||||||||||    
T  30392898 tgagcttagctcagttggtagggatattgcatattatatgtaggagtcggggttcgaac 30392840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Complemental strand, 35798093 - 35798047
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    ||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  35798093 gtgagcttaactcagttgttagagatattgcatattatatgcagggg 35798047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 40931138 - 40931184
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggg 383  Q
    |||||| |||||||| |||| |||| |||||||||||||||||||||    
T  40931138 tgtgagcttaactcatttggcagagatattgcatattatatgtaggg 40931184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 377
Target Start/End: Complemental strand, 42199947 - 42199909
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatat 377  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  42199947 tgagtttaactcagttggtagggatattgcatattatat 42199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 1500974 - 1501023
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  1500974 ctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 1501023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 1844830 - 1844879
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  1844830 ctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 1844879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 7281755 - 7281698
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaa 395  Q
    ||||||| | |||||||||||| | |||||||||||||||| |||||| | |||||||    
T  7281755 gtgagttaagctcagttggtagggatattgcatattatatgcaggggccgagttcgaa 7281698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 383
Target Start/End: Complemental strand, 11144281 - 11144236
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggg 383  Q
    ||||||||| |||||||||||||  ||||||||||||| |||||||    
T  11144281 gtgagtttagctcagttggtagaaatattgcatattatgtgtaggg 11144236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 37063533 - 37063586
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    |||||||||||| | |||||||||||||||| ||||| | ||||||||||||||    
T  37063533 ctcagttggtagggatattgcatattatatgcaggggccagggttcgaactccg 37063586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 396
Target Start/End: Complemental strand, 3287124 - 3287064
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||| ||| ||||||||| || | |||||||||||||||| ||||| ||||||||||||    
T  3287124 tgtgagcttagctcagttggaagggatattgcatattatatgcaggggccggggttcgaac 3287064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 6331575 - 6331623
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| ||| || ||||||||||    
T  6331575 ctcagttggtagggatattgcatattatatgcaggagccgggttcgaac 6331623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 6636035 - 6635983
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggggcgggg 389  Q
    |||||| ||| |||||||||||| | |||||||||||||||| |||| |||||    
T  6636035 tgtgagcttagctcagttggtagggatattgcatattatatgcagggacgggg 6635983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 19612729 - 19612777
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||||||||| | |||||||||||||||||||| || |||||||||||    
T  19612729 tcagttggtagggatattgcatattatatgtaggagctggggttcgaac 19612777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 399
Target Start/End: Complemental strand, 20898114 - 20898058
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtaggggcgg-ggttcgaactcc 399  Q
    |||||||||||||||| | ||||||||||| |||| || ||||| ||||||||||||    
T  20898114 ttaactcagttggtaggggtattgcatattttatgcagaggcggaggttcgaactcc 20898058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 380
Target Start/End: Complemental strand, 33222215 - 33222179
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgta 380  Q
    |||||||||||||||| | ||||||||||||||||||    
T  33222215 ttaactcagttggtagggatattgcatattatatgta 33222179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 38387677 - 38387725
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  38387677 tcagttggtagggatattgcatattatatgcaggggctggggttcgaac 38387725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 39408757 - 39408717
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  39408757 gtgagcttaactcagttggtagggatattgcatattatatg 39408717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 32474187 - 32473972
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||| |||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| |  ||| |||||| ||||||||||||| ||||    
T  32474187 aaaatttattaataggttccactaataactctatattattacatttctaaaacactcatttatttcaatgaaaaatattaattgaaattcacacataaaa 32474088  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaat-ggggtgcctatttagctcggtgctaaataggt 211  Q
    |||||||||||||||| ||||||||  || |||||||||||| ||||||||||||||| |  ||||| |||||| ||||||||| || |||| || ||||    
T  32474087 tgaagagagagaaggtgcttatataagcacccttctctataaacaccaataaatatcattctacaatgggggtgtctatttagcccgatgcttaacaggt 32473988  T
Q  212 gaagcacccaccattg 227  Q
    |||||| |||||||||    
T  32473987 gaagcatccaccattg 32473972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 180
Target Start/End: Original strand, 17349887 - 17350054
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||| ||||    
T  17349887 aaaatttattaataggtcccactaataactctatattattacatttctaaaacactcatttatttcattggaaaatattaattgaaattcagacataaaa 17349986  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatg 180  Q
    ||||||||||| |||| |||||| |  || |||||  ||||||||||||||||||||||| |||||||    
T  17349987 tgaagagagaggaggtgcttatacatgcacccttccttataagcaccaataaatatcactccacaatg 17350054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 209
Target Start/End: Original strand, 27000956 - 27001150
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||| |||||| ||||||||| | |||||||||   |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  27000956 aaaatttattaataggtcccactaatagctctatatt---acatttctaaaacactcatttattccattagaaaatattaaatgaaatttacacaaaaaa 27001052  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggg-gtgcctatttagctcggtgctaaatag 209  Q
    ||||||| ||||| ||| || |||| ||| | |||||| |||||||||||||||||||||  ||||||||  ||| ||||||||| |||||| |||||    
T  27001053 tgaagagggagaaagtcattctatatacaccattctctttaagcaccaataaatatcactctacaatgggattgcttatttagcttggtgcttaatag 27001150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 48261081 - 48260927
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||||||| |  ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||    
T  48261081 aaaatttactaacaagtcccactaataactctatattattatatttctaaaacactcatttatttcattagaaaatattaaatgaaattcacac-ataaa 48260983  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatat 168  Q
    |||| ||||| || |||||| |||| |||   |||||||||| |||||||||||||    
T  48260982 tgaaaagagataatgtccttctataaacacttttctctataaacaccaataaatat 48260927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 9904127 - 9904320
Alignment:
Q  20 actaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaatgaagag 119  Q
    |||||||||| ||||||| |||||||||| |||||||||| | ||||||||||||||| |||| ||  |||||||| ||||||||| ||||||| ||| |    
T  9904127 actaatagattccactaataactctatataattacatttcaacaacactcatttattttattacaatatattaaattaaattcacataaaaaattaaggg 9904226  T
Q  120 agagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggggtgcctatttagctcggtgctaaataggtgaa 214  Q
    ||||||  | ||| |||||||| |||| | |||||||||| | |||||||||| ||||||||| ||||||||||  | | |||||||||||||||    
T  9904227 agagaaaattcttctatagacacccttttatataagcacc-acaaatatcactccacaatgggatgcctatttaatttgatgctaaataggtgaa 9904320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 9694112 - 9694164
Alignment:
Q  174 cacaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccatt 226  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  9694112 cacaatggggtgcctatttagtatggtgctaaataggtgaagcacccaccatt 9694164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 14099699 - 14099814
Alignment:
Q  115 aagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatg-gggtgcctatttagctcggtgctaaataggtga 213  Q
    |||||||||| ||| ||||||||| || | |||| ||||||||||||  | | || || ||||||| |||||| |||| |   |||||||||||||||||    
T  14099699 aagagagagagggtgcttatatagtcacctttctatataagcaccaaatattttctctccacaatgagggtgcttattaattccggtgctaaataggtga 14099798  T
Q  214 agcacccaccattgtg 229  Q
    ||||||||||||||||    
T  14099799 agcacccaccattgtg 14099814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 48379534 - 48379480
Alignment:
Q  175 acaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  48379534 acaatggggtgcctatttaatgtggtgctaaataggtgaagcacccaccattgtg 48379480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 18534004 - 18534063
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  18534004 gtgagcttagctcagttggtagagatattgcatattatatgtaggagtcggggttcgaac 18534063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 30360415 - 30360474
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||| || ||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  30360415 gtgagtttagcttagttggtagagatattgcattttatatgtaggggtcggggttcgaac 30360474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 42054336 - 42054395
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  42054336 gtgagcttagctcagttggtagggatattgcatattatatgtaggggccggggttcgaac 42054395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 4249010 - 4249044
Alignment:
Q  196 tcggtgctaaataggtgaagcacccaccattgtga 230  Q
    |||||||||||||||||||||||||||||||||||    
T  4249010 tcggtgctaaataggtgaagcacccaccattgtga 4249044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 14625006 - 14624964
Alignment:
Q  198 ggtgctaaataggtgaagcacccaccattgt-gatggtcttag 239  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  14625006 ggtgctaaataggtgaagcacccaccattgtagatggtcttag 14624964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 15342894 - 15342948
Alignment:
Q  174 cacaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccattgt 228  Q
    ||||||||||||| ||||||    |||||||||||||||||||||||||||||||    
T  15342894 cacaatggggtgcttatttaatgtggtgctaaataggtgaagcacccaccattgt 15342948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 14349657 - 14349706
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggg-gcggggttcgaac 396  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  14349657 ctcagttggtagagatattgcatattatatgtagggatcggggttcgaac 14349706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 383
Target Start/End: Complemental strand, 47478915 - 47478870
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggg 383  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||    
T  47478915 gtgagcttaactcagttggtagggatattgcatattatatgtaggg 47478870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 5413391 - 5413347
Alignment:
Q  341 agtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||||||||||||| || || |||||||||||||||||||||||    
T  5413391 agtttaactcagttgttaaagatattgcatattatatgtaggggc 5413347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 10699244 - 10699192
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaa 395  Q
    |||||||||||| ||||| |||| ||||||||||||||||| |||||||||||    
T  10699244 ttaactcagttgttagagatattacatattatatgtaggggccggggttcgaa 10699192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 25580691 - 25580731
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  25580691 gtgagcttaactcagttggtagagatattgcatattatatg 25580731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 51942304 - 51942356
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||||||||||||| | |||||||||||||||  |||| ||||||||||||    
T  51942304 ttaactcagttggtagggatattgcatattatatacagggtcggggttcgaac 51942356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 3269622 - 3269681
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  3269622 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 3269681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 4553613 - 4553566
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| |||||||||||||||||  |||||||||||||||| ||||||    
T  4553613 gtgagcttaactcagttggtagaaatattgcatattatatgcaggggc 4553566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 7166294 - 7166235
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  7166294 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 7166235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 21265659 - 21265718
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  21265659 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 21265718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 22563389 - 22563448
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  22563389 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 22563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 26584813 - 26584754
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  26584813 gtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaac 26584754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 27344482 - 27344529
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| ||| |||||||||||||  |||||||||||||||||||||||    
T  27344482 gtgagcttagctcagttggtagacatattgcatattatatgtaggggc 27344529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 33207208 - 33207267
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  33207208 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 33207267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 35605690 - 35605631
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  35605690 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 35605631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 40520833 - 40520892
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| | |||| |||||||||||    
T  40520833 gtgagtttagctcagttggtagggatattgcatattatatgcatgggctggggttcgaac 40520892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 396
Target Start/End: Original strand, 40634208 - 40634263
Alignment:
Q  342 gtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||||||||| | |||||||||||||||| |||||  |||||||||||    
T  40634208 gtttaactcagttggtagggatattgcatattatatgcaggggatggggttcgaac 40634263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 42490477 - 42490418
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  42490477 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 42490418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 43884797 - 43884856
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  43884797 gtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 43884856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 44732636 - 44732695
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg-taggggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | ||||||||||||||||  |||| ||||||||||||    
T  44732636 gtgagcttaactcagttggtagggatattgcatattatatgcaagggccggggttcgaac 44732695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 9866251 - 9866193
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaa 395  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| |||||||||||    
T  9866251 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaa 9866193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 396
Target Start/End: Complemental strand, 10248492 - 10248438
Alignment:
Q  342 gtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||||||||||||||||| ||||| |||||||||| |||  ||||||| ||||    
T  10248492 gtttaactcagttggtagagatattgtatattatatgcaggctcggggtttgaac 10248438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 10664861 - 10664803
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| || | ||||||||||||    
T  10664861 gtgagcttagctcagttggtagggatattgcatattatatgcagagtcggggttcgaac 10664803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 13773171 - 13773229
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaa 395  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||| | |||||||||||    
T  13773171 gtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaa 13773229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 27740555 - 27740509
Alignment:
Q  115 aagagagagaaggtccttatatagacatccttctctataagcaccaa 161  Q
    |||||||||| ||| ||||||||| || |||||||||||||||||||    
T  27740555 aagagagagagggtgcttatatagccacccttctctataagcaccaa 27740509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 52575518 - 52575404
Alignment:
Q  116 agagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatg-gggtgcctatttagctcggtgctaaataggtgaa 214  Q
    ||||||||| ||| ||||||||| || |||||||||||||||||||  | | || || ||||||| ||  || |||| |   | ||||||||||||| ||    
T  52575518 agagagagagggtgcttatatagccacccttctctataagcaccaaatattttctctccacaatgaggaagcttattaattccagtgctaaataggtaaa 52575419  T
Q  215 gcacccaccattgtg 229  Q
    |||||||||||||||    
T  52575418 gcacccaccattgtg 52575404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 1604284 - 1604232
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||| ||| | |||||||||||||||||||||| ||||||||||||    
T  1604284 ttaactcagttg-tagggatattgcatattatatgtaggggtcggggttcgaac 1604232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 2556569 - 2556618
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  2556569 ctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 2556618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 6130090 - 6130037
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagg-ggcggggttcgaactccg 400  Q
    |||||||||||| | |||||||||||||||| ||| | ||||||||||||||||    
T  6130090 ctcagttggtagggatattgcatattatatgcaggagtcggggttcgaactccg 6130037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 18467255 - 18467206
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  18467255 ctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 18467206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 47930728 - 47930679
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  47930728 ctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 47930679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 383
Target Start/End: Complemental strand, 48607816 - 48607771
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggg 383  Q
    |||||||||||||||||| ||| | |||||||| ||||||||||||    
T  48607816 gtgagtttaactcagttgatagggatattgcattttatatgtaggg 48607771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 13538502 - 13538454
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  13538502 tcagttggtagggatattgcatattatatgcaggggccggggttcgaac 13538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 52369600 - 52369640
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||||||| |||||||||||| | ||||||||||||||||    
T  52369600 gtgagtttagctcagttggtagggatattgcatattatatg 52369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 42698054 - 42697839
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  ||| |||||| |||||| |||||| ||||    
T  42698054 aaaatttattaatagatcccactaataactctatattattacatttctaaaatactcatttatttcattgaaaaatattaattgaaatgcacacataaaa 42697955  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatgg-ggtgcctatttagctcggtgctaaataggt 211  Q
    ||||||||||||| ||  |||||||| ||  |||||||||||||||||| |||||||||| ||||||||  ||| ||||||| | || |||| |||||||    
T  42697954 tgaagagagagaaagtgtttatatagtcactcttctctataagcaccaacaaatatcactccacaatggatgtgtctatttaacccgatgcttaataggt 42697855  T
Q  212 gaagcacccaccattg 227  Q
    ||| |||||| |||||    
T  42697854 gaaacacccatcattg 42697839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 13 - 207
Target Start/End: Original strand, 1987768 - 1987962
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    ||||||||||||||  |||||||||  |||||||||| |||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||| ||    
T  1987768 aaaatttactaataagtcccactaattactctatattgttacatttataaaacacttatttatttcattagaaaatattaaatgaaatttacacaaacaa 1987867  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggggtgcctatttagctcggtgctaaat 207  Q
    ||||||||||||| ||| || ||||  || | |||||||||| ||||||||||||| ||| |||| |||| || ||||||| || | ||||||||    
T  1987868 tgaagagagagaaagtctttttataagcaccattctctataaacaccaataaatattactccacactgggatggctatttaactagatgctaaat 1987962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 36972097 - 36972313
Alignment:
Q  17 tttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa--tg 114  Q
    ||||||||||| ||| ||||| |||| |||  |||||||||||||||||||||||||||||||| |     |||||||||||||||||||||||||  ||    
T  36972097 tttactaataggtccaactaataactttat--tattacatttctaaaacactcatttatttcataa-----tattaaatgaaattcacacaaaaaaaatg 36972189  T
Q  115 aagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaat-ggggtgcctatttagctcggtgctaaataggtga 213  Q
    |||||||||  ||||| ||||||  || |||||||||||||||| ||||||||||||| || ||| ||||||  |||||| ||||||| |||||||||||    
T  36972190 aagagagag--ggtccctatataagcacccttctctataagcactaataaatatcactacataataggggtgtttatttaactcggtgttaaataggtga 36972287  T
Q  214 agcacccaccattgt-gatggtctta 238  Q
    ||||| || |||||| ||||||||||    
T  36972288 agcactcatcattgtggatggtctta 36972313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 5900295 - 5900353
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| |||||| ||||||||||    
T  5900295 gtgagcttaactcagttggtagggatattgcatattatatgcaggggccgggttcgaac 5900353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 6414071 - 6414128
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaa 395  Q
    ||||| |||||||||||||||| | |||||||||||||||| |||| |||||||||||    
T  6414071 gtgagcttaactcagttggtagggatattgcatattatatgcagggtcggggttcgaa 6414128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 546805 - 546864
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  546805 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 546864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 1469728 - 1469771
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtag 381  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  1469728 gtgagtttagctcagttggtagagatattgcatattatatgtag 1469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 12891560 - 12891619
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  12891560 gtgagcttagctcagttggtagggatattgcatattatatgtaggggccggggttcgaac 12891619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 26912836 - 26912895
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||| ||||||| | |||||||||||||||||||||| ||||||||||||    
T  26912836 gtgagcttaactcaattggtagggatattgcatattatatgtaggggccggggttcgaac 26912895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 9125666 - 9125724
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||| ||||||||||||    
T  9125666 gtgagcttagctcagttggtagcgatattgcatattatatgcagggccggggttcgaac 9125724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 17175117 - 17175059
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||||||||||||| | |||||||| ||||||| ||||| ||||||||||||    
T  17175117 tgagtttaactcagttggtagggatattgcatgttatatgcaggggccggggttcgaac 17175059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 9622438 - 9622479
Alignment:
Q  198 ggtgctaaataggtgaagcacccaccattgt-gatggtctta 238  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  9622438 ggtgctaaataggtgaagcacccaccattgtggatggtctta 9622479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 19279464 - 19279423
Alignment:
Q  200 tgctaaataggtgaagcacccaccattgt-gatggtcttagt 240  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  19279464 tgctaaataggtgaagcacccaccattgtggatggtcttagt 19279423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 32389698 - 32389657
Alignment:
Q  341 agtttaactcagttggtagagctattgcatattatatgtagg 382  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  32389698 agtttagctcagttggtagagatattgcatattatatgtagg 32389657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 33383574 - 33383619
Alignment:
Q  336 atgtgagtttaactcagttggtagagctattgcatattatatgtag 381  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||    
T  33383574 atgtgagtttaactcagttggtagagatattatatattatatgtag 33383619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 33531044 - 33530999
Alignment:
Q  116 agagagagaaggtccttatatagacatccttctctataagcaccaa 161  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  33531044 agagagagagggtgcttatatagccatccttctctataagcaccaa 33530999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 33736075 - 33736022
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  33736075 ttaactcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 33736022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 34389677 - 34389621
Alignment:
Q  340 gagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||||| ||||||||||| || |||||||| ||||||| |||||| ||||||||||    
T  34389677 gagtttagctcagttggtaaagatattgcattttatatgcaggggccgggttcgaac 34389621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 35241410 - 35241458
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  35241410 tcagttggtagagatattgcatattatatgcaggggtcggggttcgaac 35241458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 2362972 - 2363031
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| |||||  |||||||||||    
T  2362972 gtgagcttaactcagttggtagggatattgcatattatatgcaggggttggggttcgaac 2363031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 6526053 - 6526100
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||||||| |||||||||||||| ||||| |||||||||| ||||||    
T  6526053 gtgagtttagctcagttggtagagatattggatattatatgcaggggc 6526100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 6558804 - 6558867
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    ||||| ||| |||| ||||||| | |||||||||||||||| ||||| ||||||||||||||||    
T  6558804 gtgagcttagctcaattggtagggatattgcatattatatgcaggggtcggggttcgaactccg 6558867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 10758871 - 10758824
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||||||| |||| |||||| || |||||||||||||||||||||||    
T  10758871 gtgagtttagctcaattggtaaagatattgcatattatatgtaggggc 10758824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 17545239 - 17545180
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  17545239 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 17545180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 20351081 - 20351128
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttct 60  Q
    ||||||| ||||||| || |||||| ||||||||||||||||||||||    
T  20351081 aaaatttgctaataggtctcactaataactctatattattacatttct 20351128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 27765260 - 27765319
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  27765260 gtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaac 27765319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 29154845 - 29154904
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||| ||| |||||||||||| | || ||||||||||||||||| || ||||||||||    
T  29154845 tgtgagcttagctcagttggtagggatagtgcatattatatgtaggagccgggttcgaac 29154904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 40361646 - 40361583
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg-taggggcggggttcgaactccg 400  Q
    ||||||||| |||||||||||| | ||||||||||||||||  ||||  |||||||||||||||    
T  40361646 gtgagtttagctcagttggtagggatattgcatattatatgcaagggttggggttcgaactccg 40361583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 42525403 - 42525462
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  42525403 gtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 42525462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 1743130 - 1743188
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| || ||||||||||    
T  1743130 gtgagcttagctcagttggtagggatattgcatattatatgcaggagccgggttcgaac 1743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Original strand, 10241728 - 10241774
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    ||||| |||||||||||||||| | |||||||||||||||| |||||    
T  10241728 gtgagcttaactcagttggtagggatattgcatattatatgcagggg 10241774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 42885832 - 42885894
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgt-aggggcggggttcgaactcc 399  Q
    ||||| ||| || ||||||||||| ||||||||||||||||| ||||  ||||||||||||||    
T  42885832 gtgagcttagctaagttggtagagatattgcatattatatgtaagggttggggttcgaactcc 42885894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 7968428 - 7968387
Alignment:
Q  343 tttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||    
T  7968428 tttaactcaattggtagagatattgcataatatatgtagggg 7968387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 16280255 - 16280308
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||| ||||||||||| |||||||| |||||||||||||  |||||||||||    
T  16280255 ttaactgagttggtagagatattgcattttatatgtaggggttggggttcgaac 16280308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 18026889 - 18026848
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||||||||||||||||| ||||| ||||||||| |||||||    
T  18026889 ttaactcagttggtagagatattgtatattatatataggggc 18026848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 24765128 - 24765184
Alignment:
Q  104 cacaaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaa 161  Q
    |||||||| | |||||||||| ||| ||||||||| || |||||||||||||||||||    
T  24765128 cacaaaaattaaagagagagagggtgcttatatagtca-ccttctctataagcaccaa 24765184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 33433976 - 33433923
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    |||||||||||||  |||||||||||||||  ||||| ||||||||||||||||    
T  33433976 ctcagttggtagaaatattgcatattatatacaggggccggggttcgaactccg 33433923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 39886269 - 39886220
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||||||| || |||||||||||    
T  39886269 ctcagttggtagggatattgcatattatatgtaggagctggggttcgaac 39886220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 43328273 - 43328314
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgta 380  Q
    |||| |||||||||||||||||| ||||| ||||||||||||    
T  43328273 tgagcttaactcagttggtagagatattgtatattatatgta 43328314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 626810 - 626770
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||||||||||||||| |||||| |||| |||||||||||    
T  626810 gtgagtttaactcagttagtagagatattacatattatatg 626770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 396
Target Start/End: Complemental strand, 4238376 - 4238316
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||  ||||||||||  | |||||||||||||||| ||||| ||||||||||||    
T  4238376 tgtgagtttagttcagttggtatggatattgcatattatatgcaggggccggggttcgaac 4238316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 22229030 - 22228966
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    |||||||||| |||||||||||  | |||||||| ||||||| ||||| ||| ||||||||||||    
T  22229030 tgtgagtttagctcagttggtatggatattgcatgttatatgcaggggtcggagttcgaactccg 22228966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 25400447 - 25400375
Alignment:
Q  325 ataataataacatgtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||||||||  ||||||  || |||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  25400447 ataataataaattgtgagcatagctcagttggtagggatattgcatattatatgcaggagccggggttcgaac 25400375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 38030997 - 38030945
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||||||||||||    ||||||||||||||||||||||| | ||||||||    
T  38030997 ttaactcagttggtatgaatattgcatattatatgtaggggctgagttcgaac 38030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 40091480 - 40091520
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  40091480 gtgagcttaactcagttggtagggatattgcatattatatg 40091520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 214
Target Start/End: Complemental strand, 27164687 - 27164488
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    ||||||||||||||| || | |||| |||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||  ||||    
T  27164687 aaaatttactaataggtctcgctaataactttatattgttacatttctaaaatactcatttatttcattagaaaatattaaatgaaatttacac--aaaa 27164590  T
Q  113 tgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatg-gggtgcctatttagctcggtgctaaataggt 211  Q
    ||||| |||||||||||||||||||| || |||||||||| |  |||||||||||| ||| ||||||| || |||||||||| |||||||||||||||||    
T  27164589 tgaagcgagagaaggtccttatataggcacccttctctat-actaccaataaatattactccacaatgaggatgcctatttaactcggtgctaaataggt 27164491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 37526673 - 37526796
Alignment:
Q  13 aaaatttactaatagatcccactaaaaactctatattattacatttctaaaacactcatttatttcattagaaagtattaaatgaaattcacacaaaaaa 112  Q
    ||||||||||||||  || |||||| ||||||| ||| |||||||||||||||| || |||||||||||||||| |||||||||||||| ||||||||||    
T  37526673 aaaatttactaataagtctcactaataactctacattgttacatttctaaaacattcgtttatttcattagaaaatattaaatgaaatt-acacaaaaaa 37526771  T
Q  113 tgaagagagagaaggtccttatata 137  Q
    |||||||||||||||||||| ||||    
T  37526772 tgaagagagagaaggtccttctata 37526796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 16706638 - 16706760
Alignment:
Q  107 aaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggggtgcctatttagctcggtgctaaa 206  Q
    |||||||||||||||||| ||| ||| | ||| |||||| ||| ||||||||| |||  |   ||| ||||||||||||||||||||    |||||||||    
T  16706638 aaaaaatgaagagagagagggtgcttttgtagccatcctcctccataagcacccatatgttatactccacaatggggtgcctatttaatgtggtgctaaa 16706737  T
Q  207 taggtgaagcacccaccattgtg 229  Q
    |||||||||||||||||||||||    
T  16706738 taggtgaagcacccaccattgtg 16706760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 17680874 - 17680996
Alignment:
Q  107 aaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggggtgcctatttagctcggtgctaaa 206  Q
    |||||||||||||||||| ||| ||| | ||| |||||| ||| ||||||||| |||  |   ||| ||||||||||||||||||||    |||||||||    
T  17680874 aaaaaatgaagagagagagggtgcttttgtagccatcctcctccataagcacccatatgttatactccacaatggggtgcctatttaatgtggtgctaaa 17680973  T
Q  207 taggtgaagcacccaccattgtg 229  Q
    |||||||||||||||||||||||    
T  17680974 taggtgaagcacccaccattgtg 17680996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 21066889 - 21066948
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  21066889 gtgagtttagctcagttggtagggatattgcatattatatgtaggggccggggttcgaac 21066948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 42182265 - 42182202
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||    
T  42182265 gtgagcttaactcagttggtaggggtattgcatattatatgcaggggtcggggttcgaactccg 42182202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 2472985 - 2472875
Alignment:
Q  117 gagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatg-gggtgcctatttagctcggtgctaaataggtgaag 215  Q
    |||||||||||| ||||||||  || |||||||||||||||||||  | | |  || ||||||| |||||  |||| |  ||||||||||||||||||||    
T  2472985 gagagagaaggtgcttatataatcacccttctctataagcaccaaatattttgtctccacaatgagggtggatattaatttcggtgctaaataggtgaag 2472886  T
Q  216 cacccaccatt 226  Q
    |||||||||||    
T  2472885 cacccaccatt 2472875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 400
Target Start/End: Original strand, 28735730 - 28735794
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaactccg 400  Q
    |||||| |||||||||||||||| | |||||||||||||| ||| |||| |||||||||||||||    
T  28735730 tgtgagcttaactcagttggtagggatattgcatattataagtaagggctggggttcgaactccg 28735794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 9712265 - 9712206
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  9712265 gtgagcttaactcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 9712206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 47641048 - 47641107
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  47641048 gtgagcttagctcagttggtagggatattgcatattatatgtaggggctggggttcgaac 47641107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 9497971 - 9498028
Alignment:
Q  340 gagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||| |||| ||||||| | |||||||||||||||||||||| ||||||||||||    
T  9497971 gagtttagctcaattggtagggatattgcatattatatgtaggggtcggggttcgaac 9498028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 3392470 - 3392529
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||| ||  | |||||||||||||||||||||| ||||||||||||    
T  3392470 gtgagcttaactcagttgatatggatattgcatattatatgtaggggtcggggttcgaac 3392529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 3766814 - 3766873
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  3766814 gtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaac 3766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 400
Target Start/End: Original strand, 7691874 - 7691937
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaactccg 400  Q
    ||||||||||  ||||||||||| | ||||||||||||| | ||||| ||| ||||||||||||    
T  7691874 tgtgagtttagttcagttggtagggatattgcatattatgtatagggccggagttcgaactccg 7691937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 9877334 - 9877275
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  9877334 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 9877275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 10244956 - 10244897
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||| | ||||||||||||    
T  10244956 gtgagcttagctcagttggtagggatattgcatattatatgtaggagccggggttcgaac 10244897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 15106758 - 15106699
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  15106758 gtgagcttaactcagttggtagggatattgcatattatatgcaggagtcggggttcgaac 15106699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 15238892 - 15238951
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  15238892 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 15238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 19753035 - 19752976
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  19753035 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 19752976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 23102625 - 23102566
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  23102625 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 23102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 25833558 - 25833617
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  25833558 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 25833617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 30388574 - 30388515
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  30388574 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 30388515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 30806118 - 30806177
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||||| ||| ||||||||    
T  30806118 gtgagtttagctcagttggtagggatattgcatattatatgcaggggtcggagttcgaac 30806177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 37300166 - 37300119
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||||||    
T  37300166 gtgagcttagctcagttggtagggatattgcatattatatgtaggggc 37300119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 38889560 - 38889513
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||||||    
T  38889560 gtgagcttaactcagttggtagggatattgcatattatatgcaggggc 38889513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 41084042 - 41084101
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  41084042 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 41084101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 48447752 - 48447811
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| |||||||||||||||||| ||| |||| ||||||| ||||| ||||||||||||    
T  48447752 gtgagcttaactcagttggtagagatatcgcattttatatgcaggggccggggttcgaac 48447811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 13730167 - 13730117
Alignment:
Q  335 catgtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||||||| ||| || ||||||||||| |||||||||||||||| ||||||    
T  13730167 catgtgagcttagcttagttggtagagatattgcatattatatgcaggggc 13730117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 380
Target Start/End: Complemental strand, 18223784 - 18223742
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgta 380  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  18223784 gtgagcttaactcagttggtagggatattgcatattatatgta 18223742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 29625924 - 29625982
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| || | |||| |||||||    
T  29625924 gtgagcttaactcagttggtagggatattgcatattatatgcagagccgggattcgaac 29625982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 34051941 - 34051883
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    |||||||||  ||||||||||| | |||||||||||||||| |||||| ||| ||||||    
T  34051941 gtgagtttagttcagttggtagtgatattgcatattatatgcaggggctgggatcgaac 34051883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 44377113 - 44377067
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggg 383  Q
    |||||| |||||||||||||||||| |||| ||||||||||| ||||    
T  44377113 tgtgagcttaactcagttggtagagatattacatattatatgcaggg 44377067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 44385980 - 44385934
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggg 383  Q
    |||||| |||||||||||||||||| |||| ||||||||||| ||||    
T  44385980 tgtgagcttaactcagttggtagagatattacatattatatgcaggg 44385934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 47999783 - 47999841
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaa 395  Q
    ||||| ||| |||||||||||| | |||||||||||||||||||| || ||||||||||    
T  47999783 gtgagcttagctcagttggtagggatattgcatattatatgtaggagctggggttcgaa 47999841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 1563796 - 1563747
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  1563796 ctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 1563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 4232410 - 4232369
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    |||||| |||||||| ||||||||| ||||||||||||||||    
T  4232410 tgtgaggttaactcaattggtagagatattgcatattatatg 4232369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 5073270 - 5073315
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggg 383  Q
    ||||| |||||||||||||||||| ||||| |||||||||| ||||    
T  5073270 gtgagcttaactcagttggtagagatattgtatattatatgcaggg 5073315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 9907184 - 9907241
Alignment:
Q  104 cacaaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaa 161  Q
    |||||||| | |||||||||| ||| ||||||||  || |||||||||||||||||||    
T  9907184 cacaaaaattaaagagagagagggtgcttatataatcacccttctctataagcaccaa 9907241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 31115283 - 31115226
Alignment:
Q  104 cacaaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaa 161  Q
    |||||||| | |||||||||| ||||||||||||  || ||||||||||| |||||||    
T  31115283 cacaaaaagtaaagagagagatggtccttatataatcacccttctctatatgcaccaa 31115226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 33744019 - 33744068
Alignment:
Q  180 ggggtgcctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||    
T  33744019 ggggtgcctatttagctcgatgctaaataaatgaagcatccacaattgtg 33744068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 41465847 - 41465900
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    |||||||||||| | |||||||||||||||| ||||| | ||||||||||||||    
T  41465847 ctcagttggtagggatattgcatattatatgcaggggtcagggttcgaactccg 41465900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 1398964 - 1398912
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaa 395  Q
    |||||||||||||| | | |||||||||||||||| ||||| |||||||||||    
T  1398964 ttaactcagttggttgggatattgcatattatatgcaggggccggggttcgaa 1398912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 1911030 - 1910974
Alignment:
Q  170 acttcacaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccatt 226  Q
    |||||||||| ||||| |||||||     ||||||||||||||||||||||||||||    
T  1911030 acttcacaatagggtgtctatttaatatagtgctaaataggtgaagcacccaccatt 1910974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 7401454 - 7401414
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    |||||||||||||||||||||| | ||||| ||||||||||    
T  7401454 gtgagtttaactcagttggtagggatattgtatattatatg 7401414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 392
Target Start/End: Original strand, 23817190 - 23817246
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttc 392  Q
    |||||| |||||||| ||||||| | |||||||| ||||||||||||| ||||||||    
T  23817190 tgtgagcttaactcaattggtagggatattgcatgttatatgtaggggtcggggttc 23817246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 35016092 - 35016140
Alignment:
Q  181 gggtgcctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||||||||    |||||||||||| |||||||||||||||||||    
T  35016092 gggtgcctatttaatatggtgctaaatagatgaagcacccaccattgtg 35016140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 40200170 - 40200130
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  40200170 ttaactcagttggtagaaatattgcatattatatgcagggg 40200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 377
Target Start/End: Original strand, 41380911 - 41380947
Alignment:
Q  341 agtttaactcagttggtagagctattgcatattatat 377  Q
    |||||||||||||||||| || |||||||||||||||    
T  41380911 agtttaactcagttggtatagatattgcatattatat 41380947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 48288468 - 48288428
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  48288468 gtgagcttaactcagttggtagggatattgcatattatatg 48288428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 428346 - 428281
Alignment:
Q  174 cacaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccattgt-gatggtctta 238  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||||||||    
T  428346 cacaatggggtgcctatttaatctggtgctaaataggtgaagcacccaccattgtggatggtctta 428281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 14709076 - 14709024
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  14709076 tcagttggtagagatattgcatattatatgtaggggccggggttcgaactccg 14709024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 6419149 - 6419090
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggg-gcggggttcgaac 396  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||    
T  6419149 gtgagtttaactcagttggtagagatattgcatattatatgcagggtccggggttcgaac 6419090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 361163 - 361228
Alignment:
Q  335 catgtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaactcc 399  Q
    |||||||| |||||||||||||||| | |||||||||||||||| ||| | || ||||||||||||    
T  361163 catgtgagcttaactcagttggtagggatattgcatattatatgcaggagccgaggttcgaactcc 361228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 8374405 - 8374445
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  8374405 ttaactcagttggtagagatattgcataatatatgtagggg 8374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 19892332 - 19892284
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  19892332 tcagttggtagggatattgcatattatatgtaggggtcggggttcgaac 19892284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 20728960 - 20729012
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgt-aggggcggggttcgaa 395  Q
    ||||||||||| |||||| ||||||||||||||||| |||| |||||||||||    
T  20728960 ttaactcagttagtagagatattgcatattatatgtaagggccggggttcgaa 20729012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 978201 - 978142
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||| ||||||| |||| | |||||||||||||||| ||||| ||||||||||||    
T  978201 gtgagtttagctcagttagtagggatattgcatattatatgcaggggtcggggttcgaac 978142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 3294767 - 3294826
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  3294767 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 3294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 3794240 - 3794181
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  3794240 gtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaac 3794181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 4408361 - 4408420
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  4408361 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 4408420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 9246449 - 9246390
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  9246449 gtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaac 9246390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 9372268 - 9372209
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  9372268 gtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaac 9372209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 9435629 - 9435688
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  9435629 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 9435688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 12284124 - 12284187
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaactccg 400  Q
    ||||| |||||||||||||||| | ||||| |||||||||| ||| | ||||||||||||||||    
T  12284124 gtgagcttaactcagttggtagggatattgaatattatatgcaggtgtcggggttcgaactccg 12284187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 17454812 - 17454753
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| ||| |||||||||||||| |||||||||||||||| ||| | ||||||||||||    
T  17454812 gtgagcttatctcagttggtagagatattgcatattatatgcaggagtcggggttcgaac 17454753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 22997339 - 22997398
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | ||||| |||||||||||||||| ||||||||||||    
T  22997339 gtgagcttagctcagttggtagggatattgaatattatatgtaggggtcggggttcgaac 22997398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 23791062 - 23791003
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | ||||| |||||||||||||||| ||||||||||||    
T  23791062 gtgagcttagctcagttggtagggatattgaatattatatgtaggggtcggggttcgaac 23791003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 29284269 - 29284316
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    ||||||||| |||||||||||| | |||||||||||||||| ||||||    
T  29284269 gtgagtttagctcagttggtagggatattgcatattatatgaaggggc 29284316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 31802056 - 31802115
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    ||||| |||||||||||||||| | |||||||||||||||| ||| | ||||||||||||    
T  31802056 gtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaac 31802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 32050032 - 32049969
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagg-ggcggggttcgaactccg 400  Q
    ||||| ||||||||| |||||| | |||||||||||||||| ||| | ||||||||||||||||    
T  32050032 gtgagcttaactcagctggtagggatattgcatattatatgcaggagccggggttcgaactccg 32049969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 15091451 - 15091509
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaa 395  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| |||||||||||    
T  15091451 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaa 15091509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Complemental strand, 27094874 - 27094828
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    ||||| |||||||||||||||| | |||||||||||||||| |||||    
T  27094874 gtgagcttaactcagttggtagggatattgcatattatatgcagggg 27094828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Complemental strand, 3795831 - 3795782
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  3795831 ctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 3795782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 6210067 - 6210116
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  6210067 ctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 6210116  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 15285545 - 15285586
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  15285545 tgtgagtttaactcagttggtagggatattacatattatatg 15285586  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 28222872 - 28222925
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtag-gggcggggttcgaac 396  Q
    |||||||||||||||| | |||||||||||||||| || || ||||||||||||    
T  28222872 ttaactcagttggtagggatattgcatattatatgcagaggccggggttcgaac 28222925  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 13732815 - 13732855
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  13732815 gtgagcttaactcagttggtagggatattgcatattatatg 13732855  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 20969795 - 20969855
Alignment:
Q  170 acttcacaatgggg-tgcctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||||||||| |||||| |||    |||||||||||||||||| |||||||||||||    
T  20969795 acttcacaatgggggtgcctacttaatgtggtgctaaataggtgaagtacccaccattgtg 20969855  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 21208206 - 21208158
Alignment:
Q  181 gggtgcctatttagctcggtgctaaataggtgaagcacccaccattgtg 229  Q
    |||||||||||||   ||||| |||||||||||||||| ||||||||||    
T  21208206 gggtgcctatttaatacggtgttaaataggtgaagcacacaccattgtg 21208158  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 28030866 - 28030914
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtaggggc 385  Q
    |||||| ||| |||||||||||| | |||||||||||||||| ||||||    
T  28030866 tgtgagcttagctcagttggtagggatattgcatattatatgcaggggc 28030914  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 28237319 - 28237279
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  28237319 gtgagcttaactcagttggtagggatattgcatattatatg 28237279  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 396
Target Start/End: Original strand, 30704974 - 30705022
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||||||||| | |||||||| ||||||||||||| ||||||||||||    
T  30704974 tcagttggtagggatattgcatgttatatgtaggggccggggttcgaac 30705022  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 31935101 - 31935161
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||||| ||| |||||||||||| | |||||||| ||||||| ||||| ||||||||||||    
T  31935101 tgtgagcttagctcagttggtagggatattgcattttatatgcaggggtcggggttcgaac 31935161  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 349 - 395
Target Start/End: Complemental strand, 59234 - 59188
Alignment:
Q  349 tcagttggtagagctattgcatattatatgtaggggcggggttcgaa 395  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  59234 tcagttggtagagatattgcatattatatgcaggggcggggttcgaa 59188  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 178394 - 178442
Alignment:
Q  175 acaatggg-gtgcctatttagctcggtgctaaataggtgaagcacccac 222  Q
    |||||||| ||||||||||| |  |||||||||||||||||||||||||    
T  178394 acaatgggagtgcctatttaacatggtgctaaataggtgaagcacccac 178442  T

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Target: scaffold0121 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 46529 - 46588
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggc-ggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| |||||| |||||||||||    
T  46529 gtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaac 46588  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 10893 - 10834
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  10893 gtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaac 10834  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 34443 - 34542
Alignment:
Q  115 aagagagagaaggtccttatatagacatccttctctataagcaccaataaatatcacttcacaatggggtgcctatttagctcggtgctaaataggtgaa 214  Q
    |||||||||| ||| ||||||||| || ||||||||||||||| |||  | | || || ||||||||||||| | ||||   ||||||||| ||||||||    
T  34443 aagagagagatggtgcttatatagccacccttctctataagcatcaaatattttctctccacaatggggtgcttgtttattccggtgctaattaggtgaa 34542  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 50068 - 50005
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaactccg 400  Q
    ||||| |||||||||||| ||| | ||||||||||||||||||||||   ||||||||||||||    
T  50068 gtgagcttaactcagttgatagggatattgcatattatatgtaggggttagggttcgaactccg 50005  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 384
Target Start/End: Complemental strand, 65855 - 65808
Alignment:
Q  337 tgtgagtttaactcagttggtagagctattgcatattatatgtagggg 384  Q
    |||||| ||| |||||||||||| | ||||||||||||||||||||||    
T  65855 tgtgagcttagctcagttggtagggatattgcatattatatgtagggg 65808  T

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Target: scaffold1709 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1709
Description:

Target: scaffold1709; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 175 - 233
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||| ||| ||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  175 tgagcttagctcagttggtatagatattgcatattatatgcaggggccggggttcgaac 233  T

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Target: scaffold1331 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 146 - 88
Alignment:
Q  339 tgagtttaactcagttggtagagctattgcatattatatgtagggg-cggggttcgaac 396  Q
    |||| ||| ||||||||||| || |||||||||||||||| ||||| ||||||||||||    
T  146 tgagcttagctcagttggtatagatattgcatattatatgcaggggccggggttcgaac 88  T

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Target: scaffold0330 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 6777 - 6815
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtagg 382  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  6777 ttaactcagttggtagggatattgcatattatatgtagg 6815  T

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Target: scaffold0275 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Original strand, 8824 - 8882
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatgtaggggcggggttcgaac 396  Q
    ||||| ||| |||||||||||| | |||||||| ||||||| |||| ||||||||||||    
T  8824 gtgagcttagctcagttggtagggatattgcattttatatgcagggtcggggttcgaac 8882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 12472 - 12521
Alignment:
Q  348 ctcagttggtagagctattgcatattatatgtagg-ggcggggttcgaac 396  Q
    |||||||||||| | |||||||||||||||| ||| ||||||||||||||    
T  12472 ctcagttggtagggatattgcatattatatgcaggaggcggggttcgaac 12521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 22273 - 22338
Alignment:
Q  174 cacaatggggtgcctatttagctcggtgctaaataggtgaagcacccaccattgt-gatggtctta 238  Q
    |||||||||||| |||||||    |||| ||||||||||||||| |||||||||| ||||||||||    
T  22273 cacaatggggtgtctatttaatgtggtgttaaataggtgaagcatccaccattgtggatggtctta 22338  T

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Target: scaffold0166 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 7625 - 7681
Alignment:
Q  104 cacaaaaaatgaagagagagaaggtccttatatagacatccttctctataagcaccaa 161  Q
    |||||||| | |||||||||| ||| ||||||||| || |||||||||||||||||||    
T  7625 cacaaaaattaaagagagagagggtgcttatatagtca-ccttctctataagcaccaa 7681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 23370 - 23423
Alignment:
Q  344 ttaactcagttggtagagctattgcatattatatgtag-gggcggggttcgaac 396  Q
    |||||||||||||||| | |||||||||||||||| || || ||||||||||||    
T  23370 ttaactcagttggtagggatattgcatattatatgcagaggccggggttcgaac 23423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 37481 - 37441
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  37481 gtgagcttaactcagttggtagggatattgcatattatatg 37441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 3669 - 3709
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  3669 gtgagcttaactcagttggtagggatattgcatattatatg 3709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 112111 - 112151
Alignment:
Q  338 gtgagtttaactcagttggtagagctattgcatattatatg 378  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  112111 gtgagcttaactcagttggtagggatattgcatattatatg 112151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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