View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19906_low_33 (Length: 394)

Name: NF19906_low_33
Description: NF19906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19906_low_33
NF19906_low_33
[»] chr7 (28 HSPs)
chr7 (178-323)||(46358515-46358660)
chr7 (182-323)||(30884148-30884289)
chr7 (183-323)||(16933169-16933310)
chr7 (183-323)||(16938552-16938693)
chr7 (183-323)||(47340146-47340287)
chr7 (183-323)||(763697-763837)
chr7 (183-323)||(31660069-31660209)
chr7 (199-323)||(35736964-35737088)
chr7 (183-323)||(41911038-41911175)
chr7 (182-271)||(20000652-20000741)
chr7 (186-244)||(24359874-24359932)
chr7 (183-246)||(5757386-5757449)
chr7 (183-245)||(44141255-44141317)
chr7 (199-251)||(39007647-39007699)
chr7 (186-244)||(11732652-11732710)
chr7 (178-252)||(15974933-15975006)
chr7 (199-251)||(34875505-34875557)
chr7 (183-246)||(27335632-27335694)
chr7 (284-323)||(46572608-46572647)
chr7 (182-240)||(6797394-6797452)
chr7 (178-246)||(30428868-30428935)
chr7 (210-246)||(46024053-46024089)
chr7 (210-249)||(48690921-48690960)
chr7 (284-323)||(48692021-48692060)
chr7 (185-246)||(46346719-46346780)
chr7 (12-60)||(5832324-5832372)
chr7 (183-251)||(25778837-25778904)
chr7 (14-62)||(34726648-34726696)
[»] chr4 (43 HSPs)
chr4 (183-323)||(49425983-49426123)
chr4 (183-322)||(53441320-53441459)
chr4 (182-323)||(15051062-15051203)
chr4 (182-323)||(35291474-35291615)
chr4 (183-323)||(30597699-30597839)
chr4 (183-323)||(51921191-51921331)
chr4 (182-323)||(27865663-27865804)
chr4 (182-323)||(46672438-46672578)
chr4 (182-323)||(13635651-13635792)
chr4 (183-312)||(36011843-36011972)
chr4 (183-323)||(11785974-11786114)
chr4 (183-323)||(11798141-11798281)
chr4 (183-323)||(49492438-49492578)
chr4 (183-323)||(1621875-1622016)
chr4 (182-323)||(55765480-55765621)
chr4 (177-251)||(10472491-10472565)
chr4 (186-244)||(30357810-30357868)
chr4 (178-262)||(26578176-26578260)
chr4 (187-244)||(38010145-38010202)
chr4 (185-262)||(38244946-38245023)
chr4 (186-246)||(1729618-1729678)
chr4 (183-251)||(25574126-25574194)
chr4 (185-245)||(24686574-24686634)
chr4 (186-240)||(20861583-20861637)
chr4 (199-251)||(16298937-16298989)
chr4 (284-323)||(638965-639004)
chr4 (284-323)||(10473619-10473658)
chr4 (284-323)||(26577295-26577334)
chr4 (284-323)||(45256866-45256905)
chr4 (185-251)||(29826604-29826669)
chr4 (210-246)||(4168384-4168420)
chr4 (210-246)||(26447415-26447451)
chr4 (210-246)||(36621704-36621740)
chr4 (183-251)||(50643743-50643810)
chr4 (190-229)||(805109-805148)
chr4 (183-246)||(27764240-27764302)
chr4 (284-323)||(38245889-38245928)
chr4 (183-246)||(45255975-45256037)
chr4 (284-323)||(51836361-51836400)
chr4 (210-252)||(22181242-22181284)
chr4 (285-323)||(50644642-50644680)
chr4 (213-246)||(637883-637916)
chr4 (285-313)||(9551626-9551654)
[»] chr1 (44 HSPs)
chr1 (183-323)||(49936863-49937003)
chr1 (183-323)||(24635926-24636066)
chr1 (183-323)||(18618835-18618975)
chr1 (183-323)||(20434648-20434788)
chr1 (182-323)||(25888954-25889095)
chr1 (183-323)||(19897686-19897826)
chr1 (183-323)||(43452542-43452682)
chr1 (183-323)||(48762257-48762397)
chr1 (183-323)||(50351803-50351943)
chr1 (182-323)||(16975953-16976095)
chr1 (183-320)||(6314115-6314253)
chr1 (183-286)||(28375464-28375567)
chr1 (183-262)||(4097895-4097974)
chr1 (183-260)||(11421594-11421671)
chr1 (186-262)||(23175509-23175585)
chr1 (183-262)||(34369660-34369739)
chr1 (186-244)||(21256777-21256835)
chr1 (199-251)||(33097421-33097473)
chr1 (284-323)||(11422541-11422580)
chr1 (183-246)||(37639341-37639404)
chr1 (201-252)||(44260536-44260587)
chr1 (199-246)||(51801736-51801783)
chr1 (199-251)||(31529663-31529715)
chr1 (182-246)||(35198184-35198248)
chr1 (199-251)||(44688608-44688660)
chr1 (210-249)||(16115877-16115916)
chr1 (183-246)||(18056784-18056846)
chr1 (284-323)||(23174436-23174475)
chr1 (190-229)||(41033946-41033985)
chr1 (285-323)||(23817412-23817450)
chr1 (186-244)||(31083365-31083423)
chr1 (185-233)||(13590469-13590517)
chr1 (284-319)||(4097147-4097182)
chr1 (183-246)||(22348039-22348101)
chr1 (190-229)||(37228364-37228403)
chr1 (284-314)||(16116998-16117028)
chr1 (186-244)||(20507286-20507344)
chr1 (285-323)||(23921005-23921043)
chr1 (199-240)||(13673907-13673948)
chr1 (199-240)||(20372221-20372262)
chr1 (183-244)||(41033262-41033322)
chr1 (284-328)||(8401431-8401475)
chr1 (285-313)||(23319079-23319107)
chr1 (183-251)||(28323330-28323398)
[»] chr8 (39 HSPs)
chr8 (183-323)||(41099182-41099322)
chr8 (182-323)||(43690639-43690780)
chr8 (183-323)||(1149949-1150089)
chr8 (183-323)||(19784271-19784411)
chr8 (183-323)||(34633247-34633387)
chr8 (182-320)||(10237353-10237491)
chr8 (180-323)||(41451102-41451245)
chr8 (183-323)||(7857680-7857820)
chr8 (180-323)||(30413911-30414054)
chr8 (183-321)||(15227030-15227168)
chr8 (186-244)||(9852273-9852331)
chr8 (186-244)||(34648133-34648191)
chr8 (182-249)||(15260851-15260918)
chr8 (179-244)||(23396473-23396538)
chr8 (199-246)||(40247288-40247335)
chr8 (186-244)||(35302591-35302649)
chr8 (183-240)||(2522867-2522924)
chr8 (284-323)||(4835552-4835591)
chr8 (284-323)||(4840997-4841036)
chr8 (183-246)||(32987448-32987510)
chr8 (285-323)||(1209758-1209796)
chr8 (186-232)||(40023279-40023325)
chr8 (209-246)||(8550529-8550566)
chr8 (199-244)||(12355438-12355483)
chr8 (207-251)||(30651973-30652017)
chr8 (183-251)||(42433701-42433768)
chr8 (183-246)||(39021975-39022037)
chr8 (284-323)||(39657742-39657781)
chr8 (285-323)||(2751207-2751245)
chr8 (212-246)||(4836704-4836738)
chr8 (212-246)||(4842149-4842183)
chr8 (183-245)||(7058114-7058175)
chr8 (183-229)||(18022053-18022099)
chr8 (183-245)||(40012186-40012247)
chr8 (183-244)||(1208709-1208769)
chr8 (10-51)||(34898095-34898136)
chr8 (210-246)||(7614094-7614130)
chr8 (199-251)||(13526669-13526721)
chr8 (199-251)||(13616204-13616256)
[»] chr2 (32 HSPs)
chr2 (183-323)||(8149831-8149971)
chr2 (183-323)||(8154455-8154595)
chr2 (183-323)||(39355035-39355175)
chr2 (183-337)||(9143585-9143739)
chr2 (183-323)||(15016492-15016632)
chr2 (183-323)||(1292105-1292245)
chr2 (182-323)||(7487180-7487321)
chr2 (185-323)||(34464713-34464851)
chr2 (183-244)||(18762867-18762928)
chr2 (183-262)||(2263573-2263652)
chr2 (185-254)||(5098718-5098787)
chr2 (187-251)||(39548046-39548110)
chr2 (1-52)||(3558691-3558742)
chr2 (131-182)||(3558742-3558793)
chr2 (338-378)||(3558785-3558825)
chr2 (284-321)||(2264625-2264662)
chr2 (284-323)||(18297202-18297241)
chr2 (183-246)||(18298114-18298176)
chr2 (183-257)||(36636929-36637003)
chr2 (186-244)||(41346045-41346103)
chr2 (183-244)||(25192892-25192952)
chr2 (183-252)||(25995286-25995355)
chr2 (273-321)||(18762927-18762975)
chr2 (183-246)||(20709774-20709836)
chr2 (190-229)||(21155441-21155480)
chr2 (190-229)||(27974291-27974330)
chr2 (190-229)||(28060820-28060859)
chr2 (183-229)||(3925578-3925624)
chr2 (199-245)||(13081864-13081910)
chr2 (199-240)||(24024633-24024674)
chr2 (291-323)||(4578593-4578625)
chr2 (199-243)||(40853685-40853729)
[»] chr6 (22 HSPs)
chr6 (182-328)||(7089081-7089227)
chr6 (183-320)||(31216662-31216799)
chr6 (187-323)||(6900807-6900943)
chr6 (183-323)||(1449542-1449682)
chr6 (183-323)||(1536822-1536962)
chr6 (183-323)||(15493174-15493314)
chr6 (184-264)||(34870071-34870151)
chr6 (186-244)||(30908655-30908713)
chr6 (183-249)||(33346371-33346436)
chr6 (183-246)||(35119239-35119297)
chr6 (199-240)||(27079939-27079980)
chr6 (199-251)||(16968021-16968073)
chr6 (263-323)||(34869989-34870049)
chr6 (186-241)||(7764444-7764499)
chr6 (284-318)||(24736574-24736608)
chr6 (284-318)||(24736610-24736644)
chr6 (185-246)||(18611190-18611251)
chr6 (183-232)||(32556344-32556393)
chr6 (288-328)||(878365-878405)
chr6 (210-242)||(12394387-12394419)
chr6 (214-246)||(24737694-24737726)
chr6 (210-246)||(29157252-29157288)
[»] chr3 (40 HSPs)
chr3 (181-323)||(26662464-26662606)
chr3 (183-323)||(3475333-3475473)
chr3 (183-323)||(30947837-30947977)
chr3 (183-323)||(47335032-47335172)
chr3 (183-323)||(2941852-2941992)
chr3 (183-323)||(9106267-9106407)
chr3 (183-323)||(9595906-9596046)
chr3 (183-323)||(19284671-19284811)
chr3 (183-323)||(46237684-46237824)
chr3 (184-323)||(33413939-33414078)
chr3 (183-323)||(6097610-6097750)
chr3 (183-323)||(54379163-54379302)
chr3 (187-323)||(26960630-26960766)
chr3 (183-323)||(10986352-10986492)
chr3 (186-244)||(41192355-41192413)
chr3 (186-244)||(51846785-51846843)
chr3 (183-251)||(47728388-47728456)
chr3 (183-251)||(51682000-51682068)
chr3 (182-252)||(19385312-19385381)
chr3 (186-244)||(34563352-34563410)
chr3 (185-246)||(50754008-50754068)
chr3 (183-252)||(51362435-51362503)
chr3 (284-323)||(19384415-19384454)
chr3 (183-242)||(23755285-23755344)
chr3 (185-240)||(32232993-32233048)
chr3 (284-323)||(50755163-50755202)
chr3 (210-246)||(52987653-52987689)
chr3 (199-251)||(53594984-53595036)
chr3 (284-323)||(7044391-7044430)
chr3 (183-246)||(7045303-7045365)
chr3 (183-246)||(23699327-23699390)
chr3 (183-246)||(23717782-23717845)
chr3 (183-246)||(23736238-23736301)
chr3 (199-246)||(28299955-28300002)
chr3 (183-229)||(9180111-9180157)
chr3 (213-246)||(16277417-16277450)
chr3 (291-323)||(31853164-31853196)
chr3 (199-239)||(37319470-37319510)
chr3 (199-251)||(39195106-39195158)
chr3 (285-313)||(47729134-47729162)
[»] scaffold0045 (1 HSPs)
scaffold0045 (183-323)||(33684-33824)
[»] chr5 (23 HSPs)
chr5 (187-323)||(14940282-14940418)
chr5 (183-323)||(3883961-3884101)
chr5 (183-323)||(14394468-14394608)
chr5 (183-323)||(15416664-15416804)
chr5 (183-323)||(37456680-37456820)
chr5 (183-323)||(26637763-26637903)
chr5 (183-308)||(13552983-13553108)
chr5 (183-264)||(30783435-30783516)
chr5 (183-257)||(33868155-33868229)
chr5 (183-251)||(16552637-16552705)
chr5 (263-323)||(30783538-30783597)
chr5 (201-246)||(4674978-4675023)
chr5 (185-246)||(16668797-16668858)
chr5 (284-322)||(28069282-28069320)
chr5 (185-246)||(13362772-13362832)
chr5 (185-246)||(25017220-25017280)
chr5 (182-246)||(28070156-28070219)
chr5 (182-246)||(34329126-34329189)
chr5 (284-323)||(34330157-34330196)
chr5 (284-313)||(2826098-2826127)
chr5 (284-313)||(16667722-16667751)
chr5 (185-246)||(18465559-18465620)
chr5 (210-246)||(42512225-42512261)
[»] scaffold0581 (1 HSPs)
scaffold0581 (183-323)||(8347-8487)
[»] scaffold0074 (1 HSPs)
scaffold0074 (178-323)||(24269-24414)
[»] scaffold0571 (2 HSPs)
scaffold0571 (183-264)||(661-742)
scaffold0571 (263-323)||(579-639)
[»] scaffold0238 (1 HSPs)
scaffold0238 (183-252)||(25229-25297)
[»] scaffold0338 (1 HSPs)
scaffold0338 (284-323)||(6484-6523)
[»] scaffold0460 (1 HSPs)
scaffold0460 (199-240)||(1620-1661)
[»] scaffold0012 (1 HSPs)
scaffold0012 (183-240)||(119202-119259)
[»] scaffold0006 (2 HSPs)
scaffold0006 (183-240)||(209326-209383)
scaffold0006 (199-240)||(171521-171562)
[»] scaffold0097 (1 HSPs)
scaffold0097 (183-246)||(13613-13675)
[»] scaffold0544 (1 HSPs)
scaffold0544 (184-246)||(10678-10739)
[»] scaffold0002 (1 HSPs)
scaffold0002 (183-233)||(450202-450252)
[»] scaffold0558 (2 HSPs)
scaffold0558 (184-245)||(2448-2508)
scaffold0558 (184-245)||(5860-5920)
[»] scaffold0069 (1 HSPs)
scaffold0069 (199-240)||(51375-51416)
[»] scaffold0189 (1 HSPs)
scaffold0189 (183-251)||(11188-11255)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 178 - 323
Target Start/End: Original strand, 46358515 - 46358660
Alignment:
Q  178 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataatttt 277  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||    
T  46358515 aaataggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggtttt 46358614  T
Q  278 agctcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
     ||||||||||||||||||||||||||||||||||| |||||||||    
T  46358615 ggctcactttgggggtgtaggaagcaattatgttgggatttatgca 46358660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 30884289 - 30884148
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  30884289 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 30884190  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  30884189 cactttgggggtgtaggaagcaattatgttaggatttatgca 30884148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 16933310 - 16933169
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  16933310 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 16933211  T
Q  283 actttg-ggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| ||||||||||||||||||||||||  |||||||||    
T  16933210 actttggggggtgtaggaagcaattatgttgagatttatgca 16933169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 16938693 - 16938552
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  16938693 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 16938594  T
Q  283 actttg-ggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| ||||||||||||||||||||||||  |||||||||    
T  16938593 actttggggggtgtaggaagcaattatgttgagatttatgca 16938552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 47340146 - 47340287
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaa-cacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  47340146 ggcaaaagttatggtgcataagttattttcttatgcaccgtgcataaaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 47340245  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  47340246 cactttgggggtgtaggaagcaattatgttgggatttatgca 47340287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 763697 - 763837
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||  |||| ||||    
T  763697 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaaccatcagatttcttttattttgaacataaatggttttggctc 763796  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  763797 gctttgggggtgtaggaagcaattatgttgggatttatgca 763837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 31660069 - 31660209
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| | ||    
T  31660069 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggttc 31660168  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  31660169 actttgggggtgtaggaagcaattatgttgagatttatgca 31660209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 35736964 - 35737088
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcactttgggggtgtagg 298  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||||||||||| ||||||    
T  35736964 cataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctcactttggggatgtagg 35737063  T
Q  299 aagcaattatgttggaatttatgca 323  Q
    ||||||||||||||| |||||||||    
T  35737064 aagcaattatgttgggatttatgca 35737088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 41911175 - 41911038
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||  |||| | ||    
T  41911175 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat---ttttattttgaacaaaaatggttttggttc 41911079  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  41911078 actttgagggtgtaggaagcaattatgttgggatttatgca 41911038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 20000741 - 20000652
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaat 271  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||| | |||||||||||||    
T  20000741 aggcaaaagttatggtgcataagtcatttacttatgcaccgtgcataaacacatcacaaccatcagatttctttcactttgaacaaaaat 20000652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 24359874 - 24359932
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  24359874 aaaagttatggtgcataagtcatttccttatgcaccgtgcatcaacacttcacaaccat 24359932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 5757386 - 5757449
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||  | |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  5757386 ggcaaaagttattatgcataagacatttccttatgcaccgtgcataaacacttcacaaccatca 5757449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 44141317 - 44141255
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 245  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  44141317 ggcaaaagttatcatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatc 44141255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 39007699 - 39007647
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  39007699 cataagtcatttccttatgcaccctgcataaacacttcacaaccatcatattt 39007647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 11732710 - 11732652
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||||| ||||| ||||||||| |||||||||||| ||||||||||    
T  11732710 aaaagttatggtgcataagccattttcttatgcactgtgcataaacacttcacaaccat 11732652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 15975006 - 15974933
Alignment:
Q  178 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 252  Q
    |||| ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||| |||||    
T  15975006 aaattggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcatattta 15974933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 34875505 - 34875557
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  34875505 cataagccatttccttatgcaccctgcataaacacttcacaaccatcagattt 34875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 27335694 - 27335632
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||  || ||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  27335694 ggcaaaagttattataaataagtcattttcttatgcacc-tgcataaacacttcacaaccatca 27335632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 46572647 - 46572608
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  46572647 ctttgggggtgtaggaagcaattatgttgggatttatgca 46572608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 6797452 - 6797394
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    |||||||||||||  | ||||||||||||||||||||| | ||||||||||| ||||||    
T  6797452 aggcaaaagttattatgcataagtcatttccttatgcatcctgcataaacacttcacaa 6797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 30428868 - 30428935
Alignment:
Q  178 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||| ||||||||||||||| ||||||  | | ||||||||||||||||||||||  ||||||||||||    
T  30428868 aaattggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacatttcacaaccatca 30428935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 46024053 - 46024089
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||||||| ||||||||||||    
T  46024053 tccttatgcaccgtgcataaacacttcacaaccatca 46024089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 48690921 - 48690960
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatcaaat 249  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  48690921 tccttatgcaccgtgcataaacagttcacaaccatcaaat 48690960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 48692021 - 48692060
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  48692021 ctttggaggtgtaggaagcaattatgttgggatttatgca 48692060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 46346780 - 46346719
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||  | |||||||||||| |||||||| | || |||||||| ||||||||||||    
T  46346780 caaaagttattatgcataagtcattttcttatgcatcctgtataaacacttcacaaccatca 46346719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 5832372 - 5832324
Alignment:
Q  12 aacatccattaaaatcaataaaagaaatgcatattgacttgaatagtct 60  Q
    ||||||| | ||||||||| ||||| |||||||||||||| ||||||||    
T  5832372 aacatccgtcaaaatcaatgaaagagatgcatattgacttaaatagtct 5832324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 25778837 - 25778904
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||| ||||||  | ||| |||||||| |||||||| ||| |||||||||||| ||||    
T  25778837 ggcaaaagttatggtgcataagaaaattc-ttatgcactgtgcataagcacttcacaaccatcagattt 25778904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 34726696 - 34726648
Alignment:
Q  14 catccattaaaatcaataaaagaaatgcatattgacttgaatagtcttt 62  Q
    ||||||| |||| |||||||||| || ||||||||||| ||||||||||    
T  34726696 catccatgaaaaccaataaaagagatacatattgacttaaatagtcttt 34726648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 4e-57; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 49426123 - 49425983
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||    
T  49426123 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggctc 49426024  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  49426023 actttgggggtgtaggaagcaattatgttgggatttatgca 49425983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 183 - 322
Target Start/End: Original strand, 53441320 - 53441459
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||    
T  53441320 ggcaaaagttatggtgcataagttatttccttatgcatcgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggctc 53441419  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgc 322  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  53441420 actttgggggtgtaggaagcaattatgttggaatttatgc 53441459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 15051203 - 15051062
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||    
T  15051203 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggct 15051104  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  15051103 cactttgggggtgtaggaagcaattatgttaggatttatgca 15051062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 35291615 - 35291474
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| |||    
T  35291615 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccataagatttattttattttgaacaaaaatagttttggct 35291516  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    || ||||||||||||||||||||||||||||| |||||||||    
T  35291515 caatttgggggtgtaggaagcaattatgttgggatttatgca 35291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 30597699 - 30597839
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  30597699 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 30597798  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||| ||||||||||||||||||||||||||| |||||||||    
T  30597799 actctgggggtgtaggaagcaattatgttgggatttatgca 30597839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 51921331 - 51921191
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  51921331 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 51921232  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  51921231 actttgggggtgtaggaagcaattatgttgggatttatgca 51921191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 27865804 - 27865663
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    ||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| |||    
T  27865804 aggcaaaagttatagtgcataagccatttccatatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaataattttggct 27865705  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27865704 cactttgggggtgtaggaagcaattatgttgggatttatgca 27865663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 182 - 323
Target Start/End: Original strand, 46672438 - 46672578
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||    
T  46672438 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttattttattttgaacaaaaatagttttggct 46672537  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| ||||||||||||||||| ||||||| |||||||||    
T  46672538 cacttt-ggggtgtaggaagcaatcatgttgggatttatgca 46672578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 13635792 - 13635651
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||  ||||  ||    
T  13635792 aggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttttgact 13635693  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  13635692 cactttgggggtgtaggaagcaattatgttgggatttatgca 13635651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 36011843 - 36011972
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||    
T  36011843 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 36011942  T
Q  283 actttgggggtgtaggaagcaattatgttg 312  Q
    ||||| ||||||||||||||||||||||||    
T  36011943 actttaggggtgtaggaagcaattatgttg 36011972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 11785974 - 11786114
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  11785974 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11786073  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  11786074 acttttggggtgtaggaagcaattatgttgggatttatgca 11786114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 11798141 - 11798281
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  11798141 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11798240  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  11798241 actttaggggtgtaggaagcaattatgttgggatttatgca 11798281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 49492578 - 49492438
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||  ||||  |||    
T  49492578 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttttgactc 49492479  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||| || |||||||||||||||||||||| |||||||||    
T  49492478 actttaggagtgtaggaagcaattatgttgggatttatgca 49492438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 1621875 - 1622016
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  ||||  ||     
T  1621875 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttgacta 1621974  T
Q  283 acttt-gggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  1621975 actttggggggtgtaggaagcaattatgttgggatttatgca 1622016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 182 - 323
Target Start/End: Original strand, 55765480 - 55765621
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||||| |||||  ||    
T  55765480 aggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatgattttgact 55765579  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||  |||| || ||||||||||| |||| |||||||||    
T  55765580 cactttaagggtatatgaagcaattatattgggatttatgca 55765621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 10472491 - 10472565
Alignment:
Q  177 taaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  10472491 taaaaaggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacatttcacaaccatcagattt 10472565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 30357810 - 30357868
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  30357810 aaaagttatggttcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30357868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 26578260 - 26578176
Alignment:
Q  178 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 262  Q
    |||||||||||||| ||||| |||||| |||||| ||||||| ||||||||||||| |||||||||||| |||| ||| ||||||    
T  26578260 aaataggcaaaagtcatggtgcataagccatttctttatgcatcgtgcataaacacttcacaaccatcagatttctttcattttg 26578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 38010145 - 38010202
Alignment:
Q  187 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  38010145 aaagttatggtgcataagtcatttccttatgcaccatgcataaacacttcacaaccat 38010202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 38244946 - 38245023
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 262  Q
    ||||||||||||| |||||| ||||||||| ||||| || ||||||||| |||||||||||| |||| ||||||||||    
T  38244946 caaaagttatggtgcataagccatttccttctgcacagttcataaacacttcacaaccatcagatttcttttattttg 38245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 1729678 - 1729618
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  1729678 aaaagttatggtgcataagtcatttctttatacaccgtgcataaacacttcacaaccatca 1729618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 25574194 - 25574126
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  25574194 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 25574126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 24686574 - 24686634
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 245  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24686574 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatc 24686634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 20861583 - 20861637
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  20861583 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaa 20861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 16298937 - 16298989
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||    
T  16298937 cataagtcatttccttatgcaccctgcataatcacttcacaaccatcagattt 16298989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 638965 - 639004
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  638965 ctttgggggtgtaggaagcaattatgttgggatttatgca 639004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 10473619 - 10473658
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  10473619 ctttgggggtgtaggaagcaattaggttggaatttatgca 10473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 26577334 - 26577295
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  26577334 ctttgggggtgtaggaagcaattatgttgaaatttatgca 26577295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 45256866 - 45256905
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  45256866 ctttgggggtgtaggaagcaattatgttgggatttatgca 45256905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 29826669 - 29826604
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||||||||  | | ||||||||||||||||||| ||| |||||||||||| ||||    
T  29826669 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 29826604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 4168384 - 4168420
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4168384 tccttatgcaccgtgcataaacacttcacaaccatca 4168420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 26447451 - 26447415
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26447451 tccttatgcaccgtgcataaacacttcacaaccatca 26447415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 36621740 - 36621704
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36621740 tccttatgcaccgtgcataaacacttcacaaccatca 36621704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 50643743 - 50643810
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||| |||||||| ||||    
T  50643743 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcataaccatcagattt 50643810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 805109 - 805148
Alignment:
Q  190 gttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  805109 gttatggtgcataagccatttccttatgcaccgtgcataa 805148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 27764240 - 27764302
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| || |||||||||    
T  27764240 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcgcaaccatca 27764302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 38245889 - 38245928
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  38245889 ctttgggggtgtaggaaacaattatgttgggatttatgca 38245928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 45255975 - 45256037
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||| ||||    
T  45255975 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatca 45256037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 51836400 - 51836361
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  51836400 ctttaggggtgtaggaagcaattatgttgggatttatgca 51836361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 22181284 - 22181242
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatcaaattta 252  Q
    ||||||||||||||||||||| || |||||||||||| |||||    
T  22181284 tccttatgcaccgtgcataaaaacttcacaaccatcagattta 22181242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 50644642 - 50644680
Alignment:
Q  285 tttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  50644642 tttgggggtataggaagcaattatgttgggatttatgca 50644680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 637883 - 637916
Alignment:
Q  213 ttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||||||||| ||||||||||||    
T  637883 ttatgcaccgtgcataaacacttcacaaccatca 637916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Complemental strand, 9551654 - 9551626
Alignment:
Q  285 tttgggggtgtaggaagcaattatgttgg 313  Q
    |||||||||||||||||||||||||||||    
T  9551654 tttgggggtgtaggaagcaattatgttgg 9551626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 49937003 - 49936863
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| ||||| ||||    
T  49937003 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgattttggctc 49936904  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  49936903 actttgggggtgtaggaagcaattatgttgggatttatgca 49936863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 24635926 - 24636066
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  24635926 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 24636025  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  24636026 actttgggggtgtaggaagcaattatgttgggatttatgca 24636066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 18618835 - 18618975
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  18618835 ggcaaaagttatggtgcataaattatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaattgttttggctc 18618934  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  18618935 actttgggggtgtaggaagcaattatgttgggatttatgca 18618975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 20434788 - 20434648
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||||||| ||||| ||||    
T  20434788 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccattagatttctttcattttgaacaaaaatgattttggctc 20434689  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  20434688 actttgggggtgtaggaagcaattatgttgggatttatgca 20434648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 25889095 - 25888954
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  25889095 aggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 25888996  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  25888995 cactttgggggtgtaggaagcaattatgttaggatttatgca 25888954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 19897826 - 19897686
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  19897826 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 19897727  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||| ||||||||||||||||||||||| |||| ||||    
T  19897726 actttggaggtgtaggaagcaattatgttgggatttctgca 19897686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 43452542 - 43452682
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||  |||| ||||    
T  43452542 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaactatcagatttcttttattttgaacaaaaatggttttggctc 43452641  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  43452642 actttgggggtgtaggaaacaattatgttgggatttatgca 43452682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 48762397 - 48762257
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||  |||| ||||    
T  48762397 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccattagatttcttttattttgaacaaaaatggttttggctc 48762298  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  48762297 actttaggggtgtaggaagcaattatgttgggatttatgca 48762257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 50351803 - 50351943
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | | |||||||||||||||  || | ||||    
T  50351803 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctatcattttgaacaaaaatggttatggctc 50351902  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  50351903 actttgggggtgtaggaagcaattatgttgggatttatgca 50351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 323
Target Start/End: Original strand, 16975953 - 16976095
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaac-aaaaataattttagc 280  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||  |||| ||    
T  16975953 aggcaaaagttatggttcataagttatttccttatgcaccgtgtataaacacatcacaaccatcagatttcttttattttgaacaaaaaatggttttggc 16976052  T
Q  281 tcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| | |||||||||    
T  16976053 tcactttgggggtgtaggaagcaattatgttaggatttatgca 16976095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 6314115 - 6314253
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaac-aaaaataattttagct 281  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||  |||| |||    
T  6314115 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacagccatcaaatttctttcattttgaacaaaaaatggttttggct 6314214  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttat 320  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  6314215 cactttggggatgtaggaagcaattatgttgggatttat 6314253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 28375464 - 28375567
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||  |||    
T  28375464 ggcaaaagttatggtgcataagttatttctttatgcaccgtgcataaacacatcacaaccatcagattttttttattttaaacaaaaatagttttgactc 28375563  T
Q  283 actt 286  Q
    ||||    
T  28375564 actt 28375567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 4097974 - 4097895
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 262  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  4097974 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatcaaatttctttcattttg 4097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 11421594 - 11421671
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattt 260  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||    
T  11421594 ggcaaaagttatggtgcataaatcatttccttatgcaccgtgcataaacacttcacaaccatcagatttctttcattt 11421671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 23175585 - 23175509
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 262  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||    
T  23175585 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaaccatcaaatttctttcattttg 23175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 34369660 - 34369739
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 262  Q
    ||||||| ||||||| |||||| ||||| |||||||||||||||||||||| |||||||||||| |||| ||| ||||||    
T  34369660 ggcaaaaattatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccatcagatttctttcattttg 34369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 21256835 - 21256777
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||| ||||||||||    
T  21256835 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccat 21256777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 33097421 - 33097473
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  33097421 cataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 33097473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 11422541 - 11422580
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11422541 ctttgggggtgtaggaagcaattatgttggaatttatgca 11422580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 37639341 - 37639404
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||  | |||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  37639341 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatca 37639404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 44260536 - 44260587
Alignment:
Q  201 taagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 252  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  44260536 taagtcatttccttatgcaccctgcataaacacttcacaaccatcagattta 44260587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 51801783 - 51801736
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  51801783 cataagtcatttccttatgcaccctgcataaacacttcacaaccatca 51801736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 31529715 - 31529663
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||    
T  31529715 cataagccatttccttatgcaccatgcataaacacttcacaaccatcagattt 31529663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 35198248 - 35198184
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||  | |||||| |||||||||||||||| ||||||||||| ||||| ||||||    
T  35198248 aggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacagccatca 35198184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 44688660 - 44688608
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||| ||||    
T  44688660 cataagtcatttccttatgcacgctgcataaacacttcacaaccatcagattt 44688608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 16115877 - 16115916
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatcaaat 249  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  16115877 tccttatgcaccgtgcataaacacttcacaaccatcaaat 16115916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 18056784 - 18056846
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  18056784 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 18056846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 23174475 - 23174436
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  23174475 ctttgggggtgtaggaagcaattatgttgggatttatgca 23174436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 41033985 - 41033946
Alignment:
Q  190 gttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  41033985 gttatggtgcataagtcatttccttatgcaccgtgcataa 41033946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 23817412 - 23817450
Alignment:
Q  285 tttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  23817412 tttgggggtgtaggaagcaattatgttgggatttatgca 23817450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 31083365 - 31083423
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||||| |||||||||||| ||| | ||||||||| ||||||||||    
T  31083365 aaaagttatggtgcataagccatttccttatgtaccattcataaacacttcacaaccat 31083423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 13590469 - 13590517
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacac 233  Q
    ||||||||||  | ||||||||||||||||||||||| |||||||||||    
T  13590469 caaaagttattatgcataagtcatttccttatgcaccctgcataaacac 13590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 4097182 - 4097147
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaattta 319  Q
    |||||||||||||||||||||||||||||| |||||    
T  4097182 ctttgggggtgtaggaagcaattatgttgggattta 4097147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 22348039 - 22348101
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | |||||||||||| |||||||||| ||||||||||||    
T  22348039 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgcgcataaacacttcacaaccatca 22348101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 37228403 - 37228364
Alignment:
Q  190 gttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  37228403 gttatggtgcataagccatttccttatgcaccgtgcataa 37228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 314
Target Start/End: Original strand, 16116998 - 16117028
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttgga 314  Q
    |||||||||||||||||||||||||||||||    
T  16116998 ctttgggggtgtaggaagcaattatgttgga 16117028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 20507344 - 20507286
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||||| ||||||||||||||  ||||||||| |  ||||||||||    
T  20507344 aaaagttatggtgcataagccatttccttatgcattgtgcataaatatttcacaaccat 20507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 23921043 - 23921005
Alignment:
Q  285 tttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  23921043 tttgggggtgtaggaaacaattatgttgggatttatgca 23921005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 13673907 - 13673948
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    ||||||||||||||||||||||| || |||||||| ||||||    
T  13673907 cataagtcatttccttatgcaccctgtataaacacttcacaa 13673948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 20372221 - 20372262
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    |||||||||||| |||||||||| ||||||||||| ||||||    
T  20372221 cataagtcattttcttatgcaccctgcataaacacttcacaa 20372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 41033262 - 41033322
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    ||||||||||||||| ||||||  ||||||||||||||| | |||||| | |||||||||||    
T  41033262 ggcaaaagttatggtgcataagg-atttccttatgcaccatacataaagaaatcacaaccat 41033322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 8401475 - 8401431
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgcaaggta 328  Q
    |||||| |||||||||| |||||||||||| ||||||||| ||||    
T  8401475 ctttggaggtgtaggaaacaattatgttgggatttatgcacggta 8401431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Complemental strand, 23319107 - 23319079
Alignment:
Q  285 tttgggggtgtaggaagcaattatgttgg 313  Q
    |||||||||||||||||||||||||||||    
T  23319107 tttgggggtgtaggaagcaattatgttgg 23319079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 28323398 - 28323330
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||  | ||||||||||||  ||||||||| | |||||||||  ||||||||||| ||||    
T  28323398 ggcaaaagttattatgcataagtcatttttttatgcaccctccataaacactacacaaccatcagattt 28323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 41099182 - 41099322
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  41099182 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 41099281  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  41099282 actttgggggtgtaggaagcaattatgttgggatttatgca 41099322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 182 - 323
Target Start/End: Original strand, 43690639 - 43690780
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  43690639 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggct 43690738  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  43690739 cactttgggggtgtagaaagcaattatgttgggatttatgca 43690780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 1150089 - 1149949
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  1150089 ggcaaaagttatggtgcataagttattcccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctc 1149990  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  1149989 actttggaggtgtaggaagcaattatgttggaatttatgca 1149949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 19784271 - 19784411
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  19784271 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 19784370  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  19784371 actttgagggtgtaggaagcaattatgttgggatttatgca 19784411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 34633387 - 34633247
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  34633387 ggcaaaagttatggtacataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 34633288  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| ||||||| |||||||||||||||| |||||||||    
T  34633287 actttgagggtgtaagaagcaattatgttgggatttatgca 34633247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 10237353 - 10237491
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||    
T  10237353 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggct 10237452  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttat 320  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  10237453 cactttgggggtgtagaaagcaattatgttgggatttat 10237491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 323
Target Start/End: Original strand, 41451102 - 41451245
Alignment:
Q  180 ataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttag 279  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||  |||| |    
T  41451102 ataggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaatcatcagatttcttttattttgaacaaaaatggttttgg 41451201  T
Q  280 ctcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  41451202 ctcactttggaggtgtaggaagcaattatgttgggatttatgca 41451245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 7857680 - 7857820
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||| |||| ||| |||||||||||||||  |||| ||||    
T  7857680 ggcaaaagttatggtgcataagccattttcttatgcgccgtgcataaacacatcacaatcatcagatttttttaattttgaacaaaaatggttttggctc 7857779  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  7857780 actttgggggtgtaggaagcaattatgttgggatttatgca 7857820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 323
Target Start/End: Original strand, 30413911 - 30414054
Alignment:
Q  180 ataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttag 279  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||||     
T  30413911 ataggcaaaagttatgctgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttac 30414010  T
Q  280 ctcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| | | | ||||||||||||||||||||| |||||||||    
T  30414011 ctcactctagagatgtaggaagcaattatgttgggatttatgca 30414054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 183 - 321
Target Start/End: Original strand, 15227030 - 15227168
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||  |||| ||||    
T  15227030 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacattacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15227129  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatg 321  Q
    |||||  |  ||||||||||||||||||||| |||||||    
T  15227130 actttaagaatgtaggaagcaattatgttgggatttatg 15227168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 9852273 - 9852331
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9852273 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 9852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 34648191 - 34648133
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  34648191 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 34648133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 15260918 - 15260851
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaat 249  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||||||| |||||||||||||||    
T  15260918 aggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatcaaat 15260851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 23396473 - 23396538
Alignment:
Q  179 aataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||| ||| |||||||| |||||| |||||||||||||||||||||||||||| | ||||||||    
T  23396473 aatagggaaacgttatggtgcataagccatttccttatgcaccgtgcataaacactttacaaccat 23396538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 40247335 - 40247288
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  40247335 cataagtcatttccttatgcaccctgcataaacacttcacaaccatca 40247288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 35302649 - 35302591
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||| | ||||| |||||||||||||||||||||| ||||||||||    
T  35302649 aaaagttatggtgcataggacattttcttatgcaccgtgcataaacacttcacaaccat 35302591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 2522867 - 2522924
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| ||||||    
T  2522867 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 2522924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 4835591 - 4835552
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  4835591 ctttgggggtgtaggaagcaattatgttgggatttatgca 4835552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 4841036 - 4840997
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  4841036 ctttgggggtgtaggaagcaattatgttgggatttatgca 4840997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 32987510 - 32987448
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  32987510 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 32987448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 1209758 - 1209796
Alignment:
Q  285 tttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  1209758 tttgggggtgtaggaagcaattatgttgggatttatgca 1209796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 40023325 - 40023279
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaaca 232  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||||    
T  40023325 aaaagttatggtgcataagccatttccttatacaccgtgcataaaca 40023279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 8550529 - 8550566
Alignment:
Q  209 ttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  8550529 ttccttatgcaccgtgcataaacacttcacaaccatca 8550566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 12355438 - 12355483
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||    
T  12355438 cataagtcattttcttatgcaccctgcataaacacttcacaaccat 12355483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 30651973 - 30652017
Alignment:
Q  207 atttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||    
T  30651973 atttccttatgcaccctgcataaacacttcacaaccagcaaattt 30652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 42433701 - 42433768
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||| ||| |||||||||||| ||||    
T  42433701 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 42433768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 39021975 - 39022037
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||| |||||    
T  39021975 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaatcatca 39022037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 39657781 - 39657742
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  39657781 ctttaggggtgtaggaagcaattatgttgggatttatgca 39657742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 323
Target Start/End: Original strand, 2751207 - 2751245
Alignment:
Q  285 tttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  2751207 tttgggggtgtaggaagcaattatgttgggattcatgca 2751245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 4836738 - 4836704
Alignment:
Q  212 cttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||||| ||||||||||||    
T  4836738 cttatgcaccgtgcataaacacttcacaaccatca 4836704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 4842183 - 4842149
Alignment:
Q  212 cttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||||| ||||||||||||    
T  4842183 cttatgcaccgtgcataaacacttcacaaccatca 4842149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 7058114 - 7058175
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 245  Q
    ||||||||||||||| ||||||  | | | ||||||||||||||||||||| |||||||||||    
T  7058114 ggcaaaagttatggtgcataaggaaatac-ttatgcaccgtgcataaacacttcacaaccatc 7058175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 18022053 - 18022099
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||    
T  18022053 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 18022099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 40012247 - 40012186
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 245  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||||| || | |||||||||    
T  40012247 ggcaaaagttatggtgcataagg-atttccttatgcaccatgcataaagactttacaaccatc 40012186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 1208709 - 1208769
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| | ||||||||    
T  1208709 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacactttacaaccat 1208769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 34898136 - 34898095
Alignment:
Q  10 taaacatccattaaaatcaataaaagaaatgcatattgactt 51  Q
    ||||||||||| |||| |||||||||| ||||||||||||||    
T  34898136 taaacatccatcaaaaccaataaaagacatgcatattgactt 34898095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 7614094 - 7614130
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  7614094 tccttatgcaccatgcataaacacttcacaaccatca 7614130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 13526721 - 13526669
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    |||||| |||||||||||| ||  ||||||||||| |||||||||||| ||||    
T  13526721 cataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13526669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 13616256 - 13616204
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    |||||| |||||||||||| ||  ||||||||||| |||||||||||| ||||    
T  13616256 cataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13616204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 8149831 - 8149971
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  8149831 ggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 8149930  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  8149931 actttgggggtgtaggaagcaattatgttgggatttatgca 8149971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 8154455 - 8154595
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  8154455 ggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 8154554  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  8154555 actttgggggtgtaggaagcaattatgttgggatttatgca 8154595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 39355035 - 39355175
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||    
T  39355035 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 39355134  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  39355135 gctttgggggtgtaggaagcaattatgttgggatttatgca 39355175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 183 - 337
Target Start/End: Original strand, 9143585 - 9143739
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||  ||||  |||    
T  9143585 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttgactc 9143684  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgcaaggtaaccactccc 337  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  9143685 actttgggggtgtaggaagcaattatgttggaatttatgcaccataaccactccc 9143739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 15016632 - 15016492
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  15016632 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15016533  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  15016532 actttgggggtgtaggaagcaattatgttgagatttatgca 15016492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 1292245 - 1292105
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  1292245 ggcaaaagttatggtgcataagttattttcttatgcaccgtacataaacacatcacaaccatcagatttcttttattttgaacaaaaatggtttttgctc 1292146  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  1292145 attttgggggtgtaggaagcaattatgttggaatttatgca 1292105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 7487321 - 7487180
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| |||    
T  7487321 aggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggct 7487222  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  7487221 cactttggaggtgtaggaagcaattatgttgggatttatgca 7487180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 185 - 323
Target Start/End: Original strand, 34464713 - 34464851
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcac 284  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||  |||| ||||||    
T  34464713 caaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcac 34464812  T
Q  285 tttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||| ||||||||||||||||||||||| | |||||||||    
T  34464813 tttaggggtgtaggaagcaattatgtttggatttatgca 34464851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 18762867 - 18762928
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18762867 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccat 18762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 2263573 - 2263652
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttg 262  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||||||||  |||||||| ||||||    
T  2263573 ggcaaaagttatggtgcataagccatttctttatgcaccgtgcataaacacttcacaaccatcgcatttatttcattttg 2263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 5098718 - 5098787
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttatt 254  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5098718 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaatttatt 5098787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 39548046 - 39548110
Alignment:
Q  187 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  39548046 aaagttattatacataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaattt 39548110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3558691 - 3558742
Alignment:
Q  1 tgtcttttataaacatccattaaaatcaataaaagaaatgcatattgacttg 52  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3558691 tgtcttttataaacatccattaaaatcaataaaagacatgcatattgacttg 3558742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 3558742 - 3558793
Alignment:
Q  131 gtttgggagaattaaactttgaaaatgacttctcagctcacaatcttaaata 182  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3558742 gtttgggggaattaaactttgaaaatgacttctcagctcacaatcttaaata 3558793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 3558785 - 3558825
Alignment:
Q  338 tcttaaataaggcacctactttatttcattcatgtgagact 378  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3558785 tcttaaataaggcacctactttatttcattcatgtgagact 3558825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 2264625 - 2264662
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatg 321  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2264625 ctttgggggtgtaggaagcaattatgttggaatttatg 2264662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 18297241 - 18297202
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  18297241 ctttgggggtgtaggaagcaattatgttgggatttatgca 18297202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 18298176 - 18298114
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  18298176 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 18298114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 36637003 - 36636929
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttatttta 257  Q
    ||||||||||||  | |||||||||||| |||||| ||| | ||||||||| |||||||||||| |||| |||||    
T  36637003 ggcaaaagttattatgcataagtcattttcttatgtaccctacataaacacttcacaaccatcagatttgtttta 36636929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 41346103 - 41346045
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||||| ||||| ||||||||||||  |||||||| ||||||||||    
T  41346103 aaaagttatggtgcataagccattttcttatgcaccgtatataaacacttcacaaccat 41346045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 25192892 - 25192952
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||    
T  25192892 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccat 25192952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 25995286 - 25995355
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 252  Q
    ||||||||||||  | |||||| |||||||||||||||  |||||||| || |||||||||||| |||||    
T  25995286 ggcaaaagttattatgcataagacatttccttatgcactctgcataaatacttcacaaccatcagattta 25995355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 18762927 - 18762975
Alignment:
Q  273 attttagctcactttgggggtgtaggaagcaattatgttggaatttatg 321  Q
    ||||| |||||||||||  |||||||||||||||||||||| |||||||    
T  18762927 attttggctcactttggaagtgtaggaagcaattatgttgggatttatg 18762975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 20709774 - 20709836
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | |||||| |||||||||||||||| ||||||||||||    
T  20709774 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatca 20709836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 21155441 - 21155480
Alignment:
Q  190 gttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  21155441 gttatggtgcataagccatttccttatgcaccgtgcataa 21155480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 27974330 - 27974291
Alignment:
Q  190 gttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  27974330 gttatggtgcataagccatttccttatgcaccgtgcataa 27974291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 28060859 - 28060820
Alignment:
Q  190 gttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  28060859 gttatggtgcataagccatttccttatgcaccgtgcataa 28060820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 3925578 - 3925624
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||    
T  3925578 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 3925624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 13081910 - 13081864
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 245  Q
    ||||||||||||| ||||||||| | ||||||||| |||||||||||    
T  13081910 cataagtcatttcattatgcaccctacataaacacttcacaaccatc 13081864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 24024674 - 24024633
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||    
T  24024674 cataagtcaattccttatgcaccatgcataaacacttcacaa 24024633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 323
Target Start/End: Complemental strand, 4578625 - 4578593
Alignment:
Q  291 ggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||| |||||||||    
T  4578625 ggtgtaggaagcaattatgttgggatttatgca 4578593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 40853729 - 40853685
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaacca 243  Q
    |||||| |||||||||||||| | ||||||||||| |||||||||    
T  40853729 cataagccatttccttatgcatcctgcataaacacttcacaacca 40853685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 182 - 328
Target Start/End: Original strand, 7089081 - 7089227
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagct 281  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||  |||| |||    
T  7089081 aggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttggct 7089180  T
Q  282 cactttgggggtgtaggaagcaattatgttggaatttatgcaaggta 328  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  7089181 cactttgggggtgtaggaagcaattatgttgggatttatgcacggta 7089227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 31216662 - 31216799
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  31216662 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 31216761  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttat 320  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  31216762 actttaggggtgtaggaagcaattatgttggaatttat 31216799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 187 - 323
Target Start/End: Original strand, 6900807 - 6900943
Alignment:
Q  187 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcactt 286  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||||||    
T  6900807 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 6900906  T
Q  287 tgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6900907 tgggggtgtaggaagcaattatgttgggatttatgca 6900943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 1449542 - 1449682
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  1449542 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 1449641  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  1449642 actttgggggtgtaggaaacaattatgttgggatttatgca 1449682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 1536962 - 1536822
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| ||||    
T  1536962 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 1536863  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
     ||||||||||||||||||||||||| |||| |||||||||    
T  1536862 gctttgggggtgtaggaagcaattatattgggatttatgca 1536822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 15493174 - 15493314
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||||| | |||| |||||||||||||||||||  |||| ||||    
T  15493174 ggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcataaccattagatttcttttattttgaacaaaaatggttttggctc 15493273  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  15493274 actttgggggtgtaggaagcaattatgttgggatttatgca 15493314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 34870151 - 34870071
Alignment:
Q  184 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaa 264  Q
    |||||||||||||| |||||| |||||||||||||||| || ||||||||||||||||||||| |||| ||| ||||||||    
T  34870151 gcaaaagttatggtgcataagccatttccttatgcaccatgtataaacacatcacaaccatcagatttctttcattttgaa 34870071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 30908655 - 30908713
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  30908655 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30908713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 33346436 - 33346371
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaat 249  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||||||    
T  33346436 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcaaat 33346371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 35119239 - 35119297
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||||     |||||||||||||||||||||| ||||||||||||    
T  35119239 ggcaaaagttatggtgcataagtc-----cttatgcaccgtgcataaacacttcacaaccatca 35119297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 27079980 - 27079939
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  27079980 cataagtcattttcttatgcaccgtgcataaacacttcacaa 27079939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 16968073 - 16968021
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    |||||| ||||| |||||||||| ||||||||||| ||| |||||||||||||    
T  16968073 cataagccattttcttatgcaccctgcataaacacttcataaccatcaaattt 16968021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 323
Target Start/End: Complemental strand, 34870049 - 34869989
Alignment:
Q  263 aacaaaaataattttagctcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||  |||| | ||||||||| ||||||||||||||||||||| | |||||||||    
T  34870049 aacaaaaatggttttggttcactttggaggtgtaggaagcaattatgttaggatttatgca 34869989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 7764444 - 7764499
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaac 241  Q
    |||||||||||| |||||| ||||| ||||||| ||||| |||||||| |||||||    
T  7764444 aaaagttatggtgcataagccattttcttatgcgccgtgtataaacacttcacaac 7764499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 24736608 - 24736574
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaattt 318  Q
    |||||||||||||||||||||||||||||| ||||    
T  24736608 ctttgggggtgtaggaagcaattatgttgggattt 24736574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 24736644 - 24736610
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaattt 318  Q
    |||||||||||||||||||||||||||||| ||||    
T  24736644 ctttgggggtgtaggaagcaattatgttgggattt 24736610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 18611190 - 18611251
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||  | |||||| |||||| ||||||||  ||||||||||| ||||||||||||    
T  18611190 caaaagttattatgcataagacatttctttatgcactctgcataaacacttcacaaccatca 18611251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 32556344 - 32556393
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaaca 232  Q
    ||||||||||||  | |||||||||||| |||||||||| ||||||||||    
T  32556344 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaaca 32556393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 878365 - 878405
Alignment:
Q  288 gggggtgtaggaagcaattatgttggaatttatgcaaggta 328  Q
    |||||||||||||| ||||||||||| ||||||||| ||||    
T  878365 gggggtgtaggaagtaattatgttgggatttatgcacggta 878405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 12394419 - 12394387
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaacc 242  Q
    |||||||||||||||||||||||| ||||||||    
T  12394419 tccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 24737726 - 24737694
Alignment:
Q  214 tatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||| ||||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatca 24737694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 29157252 - 29157288
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||||||| | ||||||||||    
T  29157252 tccttatgcaccgtgcataaacactttacaaccatca 29157288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 181 - 323
Target Start/End: Complemental strand, 26662606 - 26662464
Alignment:
Q  181 taggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagc 280  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||    
T  26662606 taggcaaaagttattgtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggc 26662507  T
Q  281 tcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  26662506 tcactttgggggtgtaggaagcaattatgttgggatttatgca 26662464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 3475473 - 3475333
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  3475473 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 3475374  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||| | ||||||||||||||||||||| |||||||||    
T  3475373 actttggagatgtaggaagcaattatgttgggatttatgca 3475333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 30947977 - 30947837
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||  |||| ||||    
T  30947977 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaatcatcaaatttctttcattttgaacaaaaatggttttggctc 30947878  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  30947877 acttttggggtgtaggaagcaattatgttgggatttatgca 30947837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 47335032 - 47335172
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||| ||||    
T  47335032 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatgattttggctc 47335131  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  47335132 actttgggggtgtaggaaacaattatgttgggatttatgca 47335172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 2941992 - 2941852
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  2941992 ggcaaaagttatggtgcataagttatttccttatgtaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 2941893  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  2941892 actttgggggtgtagaaagcaattatgttgggatttatgca 2941852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 9106267 - 9106407
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  9106267 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatggttttggctc 9106366  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  9106367 actttgggggtgtaggaagcaattatattgggatttatgca 9106407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 9596046 - 9595906
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| ||||    
T  9596046 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 9595947  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  9595946 actttgggggtgtaggaagcaattatgttgggatttatgca 9595906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 19284671 - 19284811
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  ||||  |||    
T  19284671 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttgactc 19284770  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  19284771 actttggggatgtaggaagcaattatgttgggatttatgca 19284811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 46237824 - 46237684
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||  |||| ||||    
T  46237824 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 46237725  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||| ||| |||||||||||||||| |||||||||    
T  46237724 actttgggggagtatgaagcaattatgttgggatttatgca 46237684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 33414078 - 33413939
Alignment:
Q  184 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctca 283  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||  |||| |||||    
T  33414078 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttaaataaaaatggttttggctca 33413979  T
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||| ||||||||||||||||||| |||| |||||||||    
T  33413978 ctttgagggtgtaggaagcaattatattgggatttatgca 33413939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 6097750 - 6097610
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||  |||| ||||    
T  6097750 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcataactatcagatttcttttattttgaacaaaaatggttttggctc 6097651  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||  |||||||||||||||||||||||| |||||||||    
T  6097650 actttaagggtgtaggaagcaattatgttgggatttatgca 6097610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 54379163 - 54379302
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||   ||| ||||    
T  54379163 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaat-ggtttggctc 54379261  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    || |||| ||||||||||||||||||||||| |||||||||    
T  54379262 acattggaggtgtaggaagcaattatgttgggatttatgca 54379302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 187 - 323
Target Start/End: Original strand, 26960630 - 26960766
Alignment:
Q  187 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcactt 286  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||||| |||| |||||  ||| |||||||||||||||||||  |||| ||||||||    
T  26960630 aaagttatggtgtataagttatttccttatgcaccgtgcataaacacattacaatcatcaggtttcttttattttgaacaaaaatggttttggctcactt 26960729  T
Q  287 tgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||| |||| |||||||||    
T  26960730 tgggggtgtaggaagcaattatattgggatttatgca 26960766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 10986352 - 10986492
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||| |  |||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||  ||||  |||    
T  10986352 ggcaaaagttatgatgtataagttatttccttatgcaccgtgcataaacacatcataaccatcagatttcttttattttaaacaaaaatggttttgactc 10986451  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| || ||||||||||||||||||||  |||||||||    
T  10986452 actttgaggatgtaggaagcaattatgttgagatttatgca 10986492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 41192413 - 41192355
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  41192413 aaaagttatggtgcataagtcatttccttatgcaccgtacataaacacttcacaaccat 41192355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 51846843 - 51846785
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  51846843 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacttcacaaccat 51846785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 47728388 - 47728456
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||  | |||||||||||| |||||||||| ||||||||||| |||||||||||| ||||    
T  47728388 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaaccatcagattt 47728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 51682068 - 51682000
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| || ||||||||| ||||    
T  51682068 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcgcaaccatcagattt 51682000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 19385381 - 19385312
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 252  Q
    |||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||| |||||    
T  19385381 aggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattta 19385312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 34563410 - 34563352
Alignment:
Q  186 aaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccat 244  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||  ||||||||||    
T  34563410 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacatttcacaaccat 34563352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 50754008 - 50754068
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  50754008 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 50754068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 51362503 - 51362435
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 252  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||| |||||    
T  51362503 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattta 51362435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 19384454 - 19384415
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  19384454 ctttgggggtgtaggaagcaattatgttgggatttatgca 19384415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 23755285 - 23755344
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaacc 242  Q
    ||||||||||||  | |||||| |||||||||||||||| ||||||||||| ||||||||    
T  23755285 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaacc 23755344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 32232993 - 32233048
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||||| ||||||    
T  32232993 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 32233048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 50755163 - 50755202
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  50755163 ctttgggggtgtaggaagcaattatgttgggatttatgca 50755202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 52987689 - 52987653
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||||||||||| ||||||||||||    
T  52987689 tccttatgcaccgtgcataaacacttcacaaccatca 52987653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 53594984 - 53595036
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    |||||| ||||| |||||||||| ||||||||||| |||||||||||| ||||    
T  53594984 cataagccattttcttatgcaccctgcataaacacttcacaaccatcagattt 53595036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 7044430 - 7044391
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  7044430 ctttgggggtgtaagaagcaattatgttagaatttatgca 7044391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 7045365 - 7045303
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | ||| |||||||||||| |||||||| ||||||||||||    
T  7045365 ggcaaaagttatggtgcataaggaaattc-ttatgcaccgtgtataaacacttcacaaccatca 7045303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 23699327 - 23699390
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||  | |||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23699327 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23699390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 23717782 - 23717845
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||  | |||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23717782 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23717845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 23736238 - 23736301
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||  | |||||| ||||| ||||| |||| ||||||||||| ||||||||||||    
T  23736238 ggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23736301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 28300002 - 28299955
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||| ||||    
T  28300002 cataagtcatttccttatgtaccatgcataaacacttcacaactatca 28299955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 9180157 - 9180111
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataa 229  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||    
T  9180157 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataa 9180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 16277450 - 16277417
Alignment:
Q  213 ttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||||||||| ||||||||||||    
T  16277450 ttatgcaccgtgcataaacacttcacaaccatca 16277417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 323
Target Start/End: Original strand, 31853164 - 31853196
Alignment:
Q  291 ggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||| |||||||||    
T  31853164 ggtgtaggaagcaattatgttgggatttatgca 31853196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 37319510 - 37319470
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcaca 239  Q
    |||||||||||| |||||||||| ||||||||||| |||||    
T  37319510 cataagtcattttcttatgcaccctgcataaacacttcaca 37319470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 39195158 - 39195106
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||| ||||||| ||||| ||||| | | |||||||||||||    
T  39195158 cataagtcatttcctcatgcaccctgcatgaacactttataaccatcaaattt 39195106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 47729134 - 47729162
Alignment:
Q  285 tttgggggtgtaggaagcaattatgttgg 313  Q
    |||||||||||||||||||||||||||||    
T  47729134 tttgggggtgtaggaagcaattatgttgg 47729162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 33684 - 33824
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  33684 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 33783  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  33784 actttgggggtgtaggaagcaattatgttgggatttatgca 33824  T

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Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 187 - 323
Target Start/End: Complemental strand, 14940418 - 14940282
Alignment:
Q  187 aaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctcactt 286  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||||||    
T  14940418 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 14940319  T
Q  287 tgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||| |||||||||    
T  14940318 tgggggtgtaggaagcaattatgttgggatttatgca 14940282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 3884101 - 3883961
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||  |||| ||||    
T  3884101 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcaaatttctttcattttgaacaaaaatggttttggctc 3884002  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||| |||||||||||||||||| |||| |||||||||    
T  3884001 actttggaggtgtaggaagcaattatattgggatttatgca 3883961  T

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Target: chr5; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 14394468 - 14394608
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| ||||||  |||| ||||    
T  14394468 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaatacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 14394567  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  14394568 actttgggggtgtaggaagcaattatgttgggatttatgca 14394608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 15416664 - 15416804
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| ||||    
T  15416664 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15416763  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||| |||||||||||||| ||||||| |||||||||    
T  15416764 actttgggagtgtaggaagcaatcatgttgggatttatgca 15416804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 37456680 - 37456820
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||| |||| ||| |||||||||||||||| |||| ||||    
T  37456680 ggcaaaagttatggtgcatgagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttcattttgaacaaaaatagttttggctc 37456779  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  37456780 actttgggggtgtaggaagcaattatgttgggatttatgca 37456820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 26637903 - 26637763
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||  |||| ||||    
T  26637903 ggcaaaagttatggtgcataagccattttcttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttggctc 26637804  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  26637803 actttaggggtgtaggaagcaattatgttgggatttatgca 26637763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 13552983 - 13553108
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  13552983 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 13553082  T
Q  283 actttgggggtgtaggaagcaattat 308  Q
    ||||||  ||||||||||||||||||    
T  13553083 actttgaaggtgtaggaagcaattat 13553108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 30783435 - 30783516
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaa 264  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||    
T  30783435 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcgcaaccatcagatttctttcattttgaa 30783516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 33868155 - 33868229
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttatttta 257  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  33868155 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgatttatttta 33868229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 16552705 - 16552637
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  16552705 ggcaaaagttattatgcataagtcatttccttatgcaccatgcataaacacttcacaaccatcatattt 16552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 323
Target Start/End: Original strand, 30783538 - 30783597
Alignment:
Q  263 aacaaaaataattttagctcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||  |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  30783538 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatgttgg-atttatgca 30783597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 4674978 - 4675023
Alignment:
Q  201 taagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  4674978 taagtcatttccttatgcaccctgcataaacacttcacaaccatca 4675023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 16668858 - 16668797
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||  | |||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  16668858 caaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatca 16668797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 28069320 - 28069282
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgc 322  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  28069320 ctttgggtgtgtaggaagcaattatgttggaatttatgc 28069282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 13362772 - 13362832
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  13362772 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 13362832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 25017280 - 25017220
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||||||||    
T  25017280 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 25017220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 28070219 - 28070156
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||| ||||||  | | ||||||||||||||||||||||| ||||||| ||||    
T  28070219 aggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatca 28070156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 34329126 - 34329189
Alignment:
Q  182 aggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||||| ||||||  | | | ||||||||||||||||||||| ||||||||||||    
T  34329126 aggcaaaagttatggtgcataaggaaat-ctttatgcaccgtgcataaacacttcacaaccatca 34329189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 34330157 - 34330196
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  34330157 ctttggggatgtatgaagcaattatgttggaatttatgca 34330196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 313
Target Start/End: Complemental strand, 2826127 - 2826098
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttgg 313  Q
    ||||||||||||||||||||||||||||||    
T  2826127 ctttgggggtgtaggaagcaattatgttgg 2826098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 313
Target Start/End: Complemental strand, 16667751 - 16667722
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttgg 313  Q
    ||||||||||||||||||||||||||||||    
T  16667751 ctttgggggtgtaggaagcaattatgttgg 16667722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 18465620 - 18465559
Alignment:
Q  185 caaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||  | |||||| |||||| ||||||| | ||||||||||| ||||||||||||    
T  18465620 caaaagttattatgcataagacatttcattatgcatcctgcataaacacttcacaaccatca 18465559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 42512225 - 42512261
Alignment:
Q  210 tccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  42512225 tccttatccaccgtgcataaacacttcacaaccatca 42512261  T

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Target: scaffold0581 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 8487 - 8347
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataattttagctc 282  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||    
T  8487 ggcaaaagttatggtgcataagccatttccttatgcactgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 8388  T
Q  283 actttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||| |||||||| ||||||||||||||| |||||||||    
T  8387 actttgagggtgtagaaagcaattatgttgggatttatgca 8347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 178 - 323
Target Start/End: Original strand, 24269 - 24414
Alignment:
Q  178 aaataggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaacaaaaataatttt 277  Q
    |||| ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||| |||||| ||| |||||||||||||||  ||||    
T  24269 aaatcggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcacaaccattaaatttctttgattttgaacaaaaatggtttt 24368  T
Q  278 agctcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
     | ||||||||||||||||||||||||||||||||| |||||||||    
T  24369 ggttcactttgggggtgtaggaagcaattatgttgggatttatgca 24414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 742 - 661
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaatttattttattttgaa 264  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  742 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaa 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 323
Target Start/End: Complemental strand, 639 - 579
Alignment:
Q  263 aacaaaaataattttagctcactttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||  |||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  639 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatattgggatttatgca 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 25297 - 25229
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattta 252  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||||||| |||||||||||| |||||    
T  25297 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattta 25229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 6484 - 6523
Alignment:
Q  284 ctttgggggtgtaggaagcaattatgttggaatttatgca 323  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  6484 ctttgggggtgtaggaagcaattatgttgggatttatgca 6523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 1620 - 1661
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  1620 cataagtcatttccttatgcaccctgcataaacacttcacaa 1661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 119202 - 119259
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    ||||||||||||  |||||||||||||||  |||||||| ||||||||||| ||||||    
T  119202 ggcaaaagttattatacataagtcatttctatatgcaccctgcataaacacttcacaa 119259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 209326 - 209383
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    ||||||||||||  | |||||||||||| |||||||||| ||||||||||| ||||||    
T  209326 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 209383  T

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Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 171521 - 171562
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    ||||||||||||||||||||||| || |||||||| ||||||    
T  171521 cataagtcatttccttatgcaccctgtataaacacttcacaa 171562  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 13613 - 13675
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    ||||||||||||||| ||||||  | | |||||| |||||||||||||||| ||||||||||||    
T  13613 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatca 13675  T

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Target: scaffold0544 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 10739 - 10678
Alignment:
Q  184 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatca 246  Q
    |||||||||||||| ||||||  | | |||||| |||||||||||||||| ||||||||||||    
T  10739 gcaaaagttatggtgcataaggaaat-ccttatacaccgtgcataaacacttcacaaccatca 10678  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 450202 - 450252
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacac 233  Q
    ||||||||||||  | |||||||||||||||||| |||| |||||||||||    
T  450202 ggcaaaagttattatgcataagtcatttccttatacaccttgcataaacac 450252  T

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Target: scaffold0558 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 2448 - 2508
Alignment:
Q  184 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 245  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||  | ||||||||||||    
T  2448 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 2508  T

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Target: scaffold0558; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 5860 - 5920
Alignment:
Q  184 gcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatc 245  Q
    ||||||||||||||  |||||  |||||||||||||||||||||||  | ||||||||||||    
T  5860 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 5920  T

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Target: scaffold0069 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 51375 - 51416
Alignment:
Q  199 cataagtcatttccttatgcaccgtgcataaacacatcacaa 240  Q
    |||||||||||| |||||||||| ||||||||||| ||||||    
T  51375 cataagtcattttcttatgcaccctgcataaacacttcacaa 51416  T

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Target: scaffold0189 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 11255 - 11188
Alignment:
Q  183 ggcaaaagttatggtacataagtcatttccttatgcaccgtgcataaacacatcacaaccatcaaattt 251  Q
    ||||||||||||||| ||||||  | | |||||||||| |||||||| ||| |||||||||||| ||||    
T  11255 ggcaaaagttatggtgcataaggaaat-ccttatgcactgtgcataagcacttcacaaccatcatattt 11188  T

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