View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19906_low_37 (Length: 370)

Name: NF19906_low_37
Description: NF19906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19906_low_37
NF19906_low_37
[»] chr2 (42 HSPs)
chr2 (115-254)||(40875419-40875558)
chr2 (238-344)||(40875569-40875675)
chr2 (175-283)||(39918883-39918991)
chr2 (12-99)||(40874245-40874332)
chr2 (12-100)||(9979095-9979183)
chr2 (19-103)||(43820732-43820816)
chr2 (19-102)||(13453946-13454029)
chr2 (13-100)||(22966785-22966872)
chr2 (12-99)||(31629604-31629691)
chr2 (12-100)||(40106608-40106696)
chr2 (19-101)||(31227543-31227623)
chr2 (25-99)||(15123933-15124007)
chr2 (19-100)||(29472022-29472102)
chr2 (12-101)||(31415199-31415288)
chr2 (236-288)||(34149122-34149177)
chr2 (14-99)||(25507255-25507342)
chr2 (24-99)||(24727586-24727661)
chr2 (40-101)||(37767778-37767839)
chr2 (33-104)||(7258567-7258638)
chr2 (19-86)||(15610823-15610890)
chr2 (20-100)||(28481780-28481858)
chr2 (242-283)||(40874687-40874728)
chr2 (25-89)||(10041441-10041505)
chr2 (13-105)||(18423746-18423838)
chr2 (33-101)||(43057062-43057130)
chr2 (33-100)||(5031922-5031989)
chr2 (239-270)||(34148488-34148519)
chr2 (61-104)||(34913087-34913130)
chr2 (21-96)||(40602383-40602458)
chr2 (13-100)||(41661332-41661419)
chr2 (31-89)||(10099456-10099514)
chr2 (33-103)||(12256897-12256966)
chr2 (62-100)||(19695714-19695752)
chr2 (33-103)||(41042250-41042319)
chr2 (33-102)||(546391-546459)
chr2 (33-102)||(9207587-9207655)
chr2 (61-101)||(4036909-4036949)
chr2 (36-100)||(6336251-6336315)
chr2 (32-104)||(10687936-10688007)
chr2 (32-100)||(27307236-27307303)
chr2 (32-100)||(29168724-29168791)
chr2 (62-98)||(39285854-39285890)
[»] chr4 (41 HSPs)
chr4 (12-100)||(54222041-54222129)
chr4 (19-99)||(56215605-56215685)
chr4 (19-100)||(35206167-35206248)
chr4 (36-98)||(17367446-17367508)
chr4 (19-104)||(31092497-31092581)
chr4 (7-102)||(29963605-29963700)
chr4 (12-96)||(13140287-13140369)
chr4 (12-96)||(53190929-53191016)
chr4 (24-99)||(3078904-3078979)
chr4 (12-75)||(45652665-45652728)
chr4 (33-100)||(50831761-50831828)
chr4 (61-107)||(17363222-17363268)
chr4 (50-96)||(19899313-19899359)
chr4 (12-98)||(32871813-32871899)
chr4 (13-102)||(51957516-51957603)
chr4 (31-100)||(961275-961344)
chr4 (19-100)||(12593603-12593684)
chr4 (12-100)||(35748648-35748736)
chr4 (19-102)||(40293237-40293318)
chr4 (13-100)||(51734617-51734705)
chr4 (62-101)||(42915253-42915292)
chr4 (33-100)||(50291281-50291347)
chr4 (33-99)||(5932769-5932835)
chr4 (60-102)||(15638158-15638200)
chr4 (38-100)||(20760254-20760316)
chr4 (38-100)||(20766645-20766707)
chr4 (33-99)||(24045244-24045310)
chr4 (33-99)||(40693628-40693694)
chr4 (53-102)||(2004214-2004263)
chr4 (12-101)||(10762486-10762575)
chr4 (73-106)||(31804374-31804407)
chr4 (33-110)||(46355299-46355375)
chr4 (32-100)||(3222988-3223055)
chr4 (60-100)||(25221755-25221795)
chr4 (13-57)||(32058360-32058404)
chr4 (24-100)||(37514128-37514204)
chr4 (24-100)||(42815403-42815479)
chr4 (12-48)||(44121212-44121248)
chr4 (62-102)||(48494935-48494975)
chr4 (32-100)||(51255745-51255813)
chr4 (31-99)||(52372195-52372263)
[»] chr8 (23 HSPs)
chr8 (12-105)||(30170713-30170806)
chr8 (12-95)||(37379418-37379501)
chr8 (31-100)||(26629113-26629182)
chr8 (19-100)||(43066585-43066666)
chr8 (12-89)||(14127254-14127331)
chr8 (8-73)||(16585372-16585437)
chr8 (12-99)||(4721729-4721816)
chr8 (20-100)||(13592765-13592845)
chr8 (12-99)||(28434442-28434529)
chr8 (54-100)||(3155842-3155888)
chr8 (33-99)||(21526286-21526352)
chr8 (19-99)||(21467384-21467462)
chr8 (53-89)||(15116976-15117012)
chr8 (60-108)||(20996179-20996227)
chr8 (33-100)||(7376505-7376571)
chr8 (33-104)||(25830251-25830322)
chr8 (33-100)||(35067159-35067226)
chr8 (62-100)||(29107994-29108032)
chr8 (33-102)||(1158341-1158409)
chr8 (33-109)||(5742663-5742738)
chr8 (60-100)||(35792068-35792108)
chr8 (60-104)||(36064025-36064069)
chr8 (61-101)||(40102021-40102061)
[»] chr1 (30 HSPs)
chr1 (19-100)||(35883598-35883679)
chr1 (173-284)||(31566777-31566888)
chr1 (176-283)||(31569989-31570096)
chr1 (22-100)||(33694199-33694273)
chr1 (104-159)||(31568872-31568927)
chr1 (12-80)||(2279306-2279374)
chr1 (19-98)||(1523285-1523364)
chr1 (31-96)||(51231309-51231374)
chr1 (38-98)||(40809498-40809557)
chr1 (33-109)||(48872369-48872444)
chr1 (33-100)||(30535990-30536057)
chr1 (33-104)||(33675895-33675965)
chr1 (57-100)||(42577471-42577514)
chr1 (12-98)||(1922409-1922495)
chr1 (33-99)||(25098794-25098859)
chr1 (33-99)||(49931553-49931619)
chr1 (31-100)||(38519996-38520065)
chr1 (61-105)||(25989017-25989061)
chr1 (19-58)||(3904225-3904264)
chr1 (21-100)||(12021929-12022007)
chr1 (61-100)||(44672063-44672102)
chr1 (33-100)||(48858822-48858889)
chr1 (62-100)||(14983783-14983821)
chr1 (33-99)||(49020409-49020475)
chr1 (33-98)||(5574265-5574329)
chr1 (33-101)||(49425736-49425802)
chr1 (33-101)||(9566966-9567034)
chr1 (33-101)||(12999828-12999895)
chr1 (32-104)||(25130698-25130769)
chr1 (32-100)||(48983672-48983740)
[»] scaffold1625 (1 HSPs)
scaffold1625 (12-100)||(765-853)
[»] chr5 (27 HSPs)
chr5 (19-99)||(41621919-41621999)
chr5 (19-100)||(30838356-30838437)
chr5 (12-101)||(43057433-43057522)
chr5 (14-99)||(8728565-8728652)
chr5 (19-99)||(26754629-26754709)
chr5 (21-101)||(34270511-34270591)
chr5 (35-106)||(11306691-11306761)
chr5 (13-99)||(15004709-15004795)
chr5 (13-87)||(34674868-34674942)
chr5 (13-99)||(2629818-2629906)
chr5 (31-96)||(38097782-38097847)
chr5 (12-102)||(844033-844120)
chr5 (33-105)||(11880993-11881064)
chr5 (33-100)||(11148510-11148577)
chr5 (33-99)||(4719650-4719716)
chr5 (33-99)||(17063865-17063930)
chr5 (24-101)||(18695316-18695393)
chr5 (33-100)||(611863-611930)
chr5 (31-100)||(14780426-14780493)
chr5 (33-99)||(22098255-22098321)
chr5 (25-99)||(35570813-35570887)
chr5 (33-99)||(41460116-41460181)
chr5 (60-100)||(1293118-1293158)
chr5 (33-105)||(16690493-16690565)
chr5 (60-100)||(27487886-27487926)
chr5 (12-101)||(29806986-29807075)
chr5 (54-102)||(35475813-35475861)
[»] chr7 (29 HSPs)
chr7 (19-100)||(8352773-8352854)
chr7 (12-99)||(6892617-6892704)
chr7 (7-100)||(48395247-48395340)
chr7 (12-94)||(22588945-22589027)
chr7 (13-105)||(11813339-11813431)
chr7 (14-98)||(17909036-17909120)
chr7 (19-95)||(47925341-47925417)
chr7 (19-99)||(48314352-48314432)
chr7 (19-96)||(42663406-42663483)
chr7 (13-69)||(27306010-27306066)
chr7 (19-94)||(24957182-24957257)
chr7 (12-99)||(7212647-7212738)
chr7 (14-96)||(23816284-23816366)
chr7 (14-75)||(34820634-34820695)
chr7 (35-99)||(6427210-6427274)
chr7 (12-96)||(11503561-11503641)
chr7 (33-100)||(37392042-37392108)
chr7 (33-104)||(46148161-46148231)
chr7 (33-99)||(34978296-34978362)
chr7 (62-99)||(8459614-8459651)
chr7 (33-98)||(38340388-38340453)
chr7 (24-105)||(46829473-46829554)
chr7 (33-101)||(2008863-2008931)
chr7 (60-100)||(9363386-9363426)
chr7 (13-100)||(9792765-9792853)
chr7 (32-100)||(12007190-12007258)
chr7 (33-109)||(13437188-13437263)
chr7 (61-101)||(21752656-21752696)
chr7 (33-101)||(42584800-42584868)
[»] chr6 (15 HSPs)
chr6 (19-96)||(20029264-20029341)
chr6 (12-97)||(38598-38683)
chr6 (12-96)||(13093629-13093715)
chr6 (33-100)||(31883309-31883376)
chr6 (22-75)||(33683524-33683577)
chr6 (33-101)||(34792020-34792087)
chr6 (33-100)||(9188950-9189016)
chr6 (12-95)||(10840722-10840805)
chr6 (33-100)||(17551384-17551451)
chr6 (62-100)||(1196057-1196095)
chr6 (33-99)||(18065095-18065161)
chr6 (31-68)||(10944542-10944579)
chr6 (19-100)||(31204801-31204882)
chr6 (33-105)||(2242027-2242099)
chr6 (19-103)||(25109040-25109123)
[»] chr3 (25 HSPs)
chr3 (12-99)||(9326969-9327056)
chr3 (12-104)||(41448163-41448252)
chr3 (19-100)||(31143269-31143350)
chr3 (20-100)||(47187512-47187592)
chr3 (14-100)||(19623238-19623324)
chr3 (13-75)||(48335235-48335297)
chr3 (14-87)||(6976942-6977015)
chr3 (12-96)||(11323912-11323994)
chr3 (61-107)||(34271523-34271569)
chr3 (22-99)||(39284663-39284738)
chr3 (23-97)||(41850945-41851019)
chr3 (60-101)||(19150351-19150392)
chr3 (24-104)||(29573352-29573432)
chr3 (58-101)||(8949790-8949833)
chr3 (22-101)||(27718780-27718859)
chr3 (33-100)||(37894248-37894315)
chr3 (61-100)||(38359339-38359378)
chr3 (33-100)||(48405409-48405476)
chr3 (33-103)||(36869843-36869912)
chr3 (12-75)||(15927578-15927642)
chr3 (32-100)||(27162474-27162541)
chr3 (33-101)||(29917029-29917097)
chr3 (33-101)||(29966182-29966250)
chr3 (31-99)||(41442172-41442240)
chr3 (33-104)||(44813453-44813522)
[»] scaffold0432 (1 HSPs)
scaffold0432 (33-101)||(6525-6593)
[»] scaffold0115 (1 HSPs)
scaffold0115 (33-101)||(15194-15261)
[»] scaffold0635 (1 HSPs)
scaffold0635 (25-89)||(5565-5629)
[»] scaffold0178 (1 HSPs)
scaffold0178 (14-89)||(11539-11614)
[»] scaffold0392 (1 HSPs)
scaffold0392 (22-101)||(12243-12321)
[»] scaffold0128 (1 HSPs)
scaffold0128 (33-106)||(10929-11002)


Alignment Details
Target: chr2 (Bit Score: 116; Significance: 6e-59; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 115 - 254
Target Start/End: Original strand, 40875419 - 40875558
Alignment:
Q  115 ttatttgtttatttataaaaatgtaactcaattaattttaactaacgtgacataatgtaacaagaaatgttggcgcaccatggtgtggaacgggaccact 214  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||     
T  40875419 ttatttatttatttataaaaatgtaactcaattaattttaactaacgtgacataatgcaacaagaaatgttggcggaccatggtgtggaacaggaccacc 40875518  T
Q  215 taatgcccgaagaagaaataattaaatgtattgtactttt 254  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  40875519 taatgcccgaagaagaaataattaaatgtattgtattttt 40875558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 40875569 - 40875675
Alignment:
Q  238 aaatgtattgtacttttaaatgtgtcatattaaataataaatattttccctnnnnnnnntctgaatttctagttgatcttgtgtttgaccataaacttca 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||    
T  40875569 aaatgtattgtacttttaaatgtgtcatattaaataataaatattttccctaaaaaaaatctgaatttctagttgatcttgtgtttgaccataaacttca 40875668  T
Q  338 ctttgtc 344  Q
    |||||||    
T  40875669 ctttgtc 40875675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 283
Target Start/End: Original strand, 39918883 - 39918991
Alignment:
Q  175 caagaaatgttggcgcaccatggtgtggaacgggaccacttaatgcccgaagaagaaataattaaatgtattgtacttttaaatgtgtcatattaaataa 274  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||| |||||||||||||| | ||||||    
T  39918883 caagaaatattggcgcaccatggtgtggaacaggaccacataatgcccaaagaagaaatatttaaatgtattgtacctttaaatgtgtcatctaaaataa 39918982  T
Q  275 taaatattt 283  Q
    |||||||||    
T  39918983 taaatattt 39918991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 40874245 - 40874332
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  40874245 gaagaaggagaataaaagcatatgtgagtatgagagacatggttgtttcaaaagttgttaaaaaatggttgtacaaatatcatttctc 40874332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 9979183 - 9979095
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||||  ||||| |||| |||||||| |||||||||| ||||||||||    
T  9979183 gaagagagagaataaaaacacatgtgagtatgagagagatggttgtcacaaaaattgtgaaaaagtggttgtacaaatatcatttctct 9979095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 43820732 - 43820816
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatt 103  Q
    ||||||||||  | |||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  43820732 gagaataaaaaaatatgtgagtatgagaaagatggttgtttcaaaagttgtaaaaaaatgattgtacaaatatcatttctctatt 43820816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 13453946 - 13454029
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||||||| ||||||||||||||||||| |   |||||||||||||||| |||||||||||||||| || ||||||||||||    
T  13453946 gagaataaaaacacatgtgagtatgagagagagaattgtttcaaaagttgtcaaaaagtgattgtacagatatcatttctctat 13454029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 22966872 - 22966785
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| |||||||||| ||||||||| ||||||||| | |||||||||||||||| | |||||||| |||||||||| ||||||||||    
T  22966872 aagagagagaataaaaacacatgtgaatatgagagagagggttgtttcaaaagttatcaaaaagtggttgtacaaatatcatttctct 22966785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 31629691 - 31629604
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||| |||||||||| ||||||||||||| ||||| ||||||||| |||||||||| |||||||  |||||||||| |||||||||    
T  31629691 gaagagagagaataaaaacacatgtgagtattagagagatggttgttccaaaagttgtcaaaaagtagttgtacaaatatcatttctc 31629604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 40106696 - 40106608
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||| |||||||||| | ||||| ||||||||||| |||||||||||| ||||||| ||| |||| |||||||||| ||||||||||    
T  40106696 gaagagagagaataaaaacgcatgtaagtatgagagagatggttgtttcataagttgtcaaagagtggttgtacaaatatcatttctct 40106608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 31227543 - 31227623
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    ||||||||||  |||||||||||||||||| |  ||||||||||||||||| |||||||||||||||| || |||||||||||    
T  31227543 gagaataaaaaaacatgtgagtatgagagaga--gttgtttcaaaagttgtcaaaaagtgattgtacacatatcatttctcta 31227623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 15123933 - 15124007
Alignment:
Q  25 aaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||| ||||| || |||||||||| |||||||||    
T  15123933 aaaaacacatgtgagtatgagagatatgattgtttcaaaagttgtcaaaaaatggttgtacaaatatcatttctc 15124007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 29472022 - 29472102
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||| |||||||||||||||||||   ||||||||||||||||| | |||||||||| ||||||| ||||||||||    
T  29472022 gagaataaaaacacatgtgagtatgagagagggggttgtttcaaaagttg-tcaaaagtgattttacaaatatcatttctct 29472102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 31415199 - 31415288
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||| || ||||||| |||| |||||||| ||| | |||||||||||||||||||| ||||||| |  |||||||| |||||||||||    
T  31415199 gaagagagacaataaaaacacaagtgagtataagaaatatggttgtttcaaaagttgtcaaaaagtaaacgtacaaatatcatttctcta 31415288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 34149122 - 34149177
Alignment:
Q  236 ttaaatgtattgtacttttaaatgtgtcatat---taaataataaatattttccct 288  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  34149122 ttaaatgtattgtacttttaaatgtgtcatattaataaataataaatattttccct 34149177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 25507342 - 25507255
Alignment:
Q  14 agagggagaataaaagcacatgtgagtatgagagacat--ggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||| ||||||||||  ||||||||||| |||||| |   |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  25507342 agagagagaataaaattacatgtgagtacgagagagagagggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttctc 25507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 24727586 - 24727661
Alignment:
Q  24 taaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||| || |||||| ||||||||| |  ||||||||||||||||| |||||||| |||||||||| |||||||||    
T  24727586 taaaaacatatgtgaatatgagagagagtgttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttctc 24727661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 37767778 - 37767839
Alignment:
Q  40 tatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    ||||||||| ||| |||||||||||||||| |||||||| ||||| |||| |||||||||||    
T  37767778 tatgagagagatgattgtttcaaaagttgtcaaaaagtggttgtataaatatcatttctcta 37767839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 7258567 - 7258638
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    |||| ||||||||||| |   ||||| |||||||||| ||| ||||||||||||||| ||||||||||||||    
T  7258567 atgtaagtatgagagagaaaattgttacaaaagttgtcaaagagtgattgtacaaatgtcatttctctattt 7258638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 15610823 - 15610890
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtaca 86  Q
    ||||||||||  |||||||||||||| ||| | |||||||||||||||||| ||||| || |||||||    
T  15610823 gagaataaaaaaacatgtgagtatgatagagagggttgtttcaaaagttgtcaaaaaatggttgtaca 15610890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 28481858 - 28481780
Alignment:
Q  20 agaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||| ||||||||||||||||||| |  |||||| |||||||||| ||||| || |||| ||||| | ||||||||    
T  28481858 agaataaaaacacatgtgagtatgagagaga--gttgttccaaaagttgtcaaaaaatggttgttcaaatattatttctct 28481780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 40874728 - 40874687
Alignment:
Q  242 gtattgtacttttaaatgtgtcatattaaataataaatattt 283  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  40874728 gtattgtacctttaaatgtgtcatcttaaataataaatattt 40874687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 10041441 - 10041505
Alignment:
Q  25 aaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaat 89  Q
    |||| ||||||||||||||||||| || ||||||| || |||||| |||||||| || |||||||    
T  10041441 aaaaacacatgtgagtatgagagaaattgttgtttaaagagttgtcaaaaagtggttctacaaat 10041505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 18423746 - 18423838
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattta 105  Q
    ||||| |||||||||| ||||||||||||||||||  ||| |||||| ||||| | | ||||| |   ||||||||| |||||||||| ||||    
T  18423746 aagagagagaataaaaacacatgtgagtatgagagtgatgattgttttaaaagatatcaaaaaatagatgtacaaatatcatttctcttttta 18423838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 43057130 - 43057062
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||| ||||| |  |||||  ||||||||||||||||||| |||| ||||| |||||||||||    
T  43057130 atgtgagtataagagagaaagttgtcacaaaagttgttaaaaagtggttgttcaaatatcatttctcta 43057062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 5031989 - 5031922
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||  |||||||||||| ||| || |||||||||| ||||||||||    
T  5031989 atgtgagtatgagagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaatatcatttctct 5031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 270
Target Start/End: Complemental strand, 34148519 - 34148488
Alignment:
Q  239 aatgtattgtacttttaaatgtgtcatattaa 270  Q
    ||||||||||||||||||||||||||||||||    
T  34148519 aatgtattgtacttttaaatgtgtcatattaa 34148488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 34913130 - 34913087
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||    
T  34913130 aaaagttattaaaaaatgattgtacaaatatcatttctctattt 34913087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 40602383 - 40602458
Alignment:
Q  21 gaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||||| || |||||||||||||| | | ||||| || | ||||||| |||||||| |||||||||| ||||||    
T  40602383 gaataaaaacatatgtgagtatgagatagaaggttgctttataagttgtcaaaaagtggttgtacaaatatcattt 40602458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 41661419 - 41661332
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||| |||   ||||||||||||||||| | |||| |||||| |||||| |||||||  |||||||| | |||| |||||    
T  41661419 aagagggagaatgaaaaagcatgtgagtatgagagagaaggttttttcaatagttgtcaaaaagtagttgtacaagtatcatctctct 41661332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 10099456 - 10099514
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaat 89  Q
    |||||||||||||||||| || ||||||| || |||||| |||||||| || |||||||    
T  10099456 acatgtgagtatgagagaaattgttgtttaaagagttgtcaaaaagtggttctacaaat 10099514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 12256966 - 12256897
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatt 103  Q
    |||||||||||||||| | ||||||  |||||||| |  |||| ||||||||||||| |||||||||||||    
T  12256966 atgtgagtatgagagagaaggttgta-caaaagttatacaaaaatgattgtacaaatatcatttctctatt 12256897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 19695714 - 19695752
Alignment:
Q  62 aaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  19695714 aaagttgtcaaaaagtgattgtacaaatatcatttctct 19695752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 41042319 - 41042250
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatt 103  Q
    |||||||||||||||| |  |||||  |||||||||||||||| || |||| ||||| |||||||||||||    
T  41042319 atgtgagtatgagagaaaaagttgtcacaaaagttgttaaaaa-tggttgttcaaatatcatttctctatt 41042250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 546391 - 546459
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||||||||||||| |  ||||||  ||||||||| | |||||| |||||||||| ||||||||||||    
T  546391 atgtgagtatgagagagaaagttgtta-aaaagttgtaataaagtggttgtacaaatatcatttctctat 546459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 9207655 - 9207587
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||||||||||||| |  |||||  |||||||||| ||||| ||||||| ||||| ||||||||||||    
T  9207655 atgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaa-tgattgttcaaatatcatttctctat 9207587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 4036909 - 4036949
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||||  |||||||||| |||||||||||    
T  4036909 aaaagttgttaaaaagtagttgtacaaatatcatttctcta 4036949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 6336315 - 6336251
Alignment:
Q  36 tgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||| |  |||||  |||||||||||| ||| || |||||||||| ||||||||||    
T  6336315 tgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctct 6336251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 10688007 - 10687936
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    ||||||||||||||||| |  ||||| | ||||||||| | ||| || |||||||||| ||||||||||||||    
T  10688007 catgtgagtatgagagagaaagttgtat-aaaagttgtcacaaattgtttgtacaaatatcatttctctattt 10687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 27307236 - 27307303
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||| |  |||||  |||||||||| | ||| ||||||||||||| ||||||||||    
T  27307236 catgtgagtatgagagagaaagttgta-caaaagttgtcacaaattgattgtacaaatatcatttctct 27307303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 29168791 - 29168724
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||| |  |||| | |||||||||| ||||| || |||||||||| ||||||||||    
T  29168791 catgtgagtatgagagagaaagttg-tgcaaaagttgtcaaaaaatggttgtacaaatatcatttctct 29168724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 39285890 - 39285854
Alignment:
Q  62 aaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  39285890 aaagttgtcaaaaagtgattgtacaaatatcatttct 39285854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 7e-31; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 54222041 - 54222129
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| ||||| ||||    
T  54222041 gaagagggagaataaaagcacatgtgagtatgagagacatgattgttccaaaagttgttaaaaagtggttgtacaaatatcattcctct 54222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 56215685 - 56215605
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||| ||||||||||||||||||| ||| ||| |||||||||||| |||||||| |||||||||| |||||||||    
T  56215685 gagaataaaaacacatgtgagtatgagagagatgattggttcaaaagttgtcaaaaagtggttgtacaaatatcatttctc 56215605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 35206248 - 35206167
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||| ||||||||||||| ||||| |  ||||||||||||||| | ||||||||||||||||||  ||||||||||    
T  35206248 gagaataaaaacacatgtgagtataagagagagagttgtttcaaaagttatcaaaaagtgattgtacaaacatcatttctct 35206167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 17367508 - 17367446
Alignment:
Q  36 tgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||| |||| ||||||||    
T  17367508 tgagtatgagagagatggttgtttcaaaagttgtcaaaaagtggttgtataaatatcatttct 17367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 31092497 - 31092581
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    |||||||||| |||||||||||||| |||| ||||| ||| ||||||||| | ||||||| |||||||||| | ||||||||||||    
T  31092497 gagaataaaaacacatgtgagtatgggagatatggtcgttccaaaagttg-tcaaaagtggttgtacaaatataatttctctattt 31092581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 29963700 - 29963605
Alignment:
Q  7 gagatgaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||| |||||| |||||||||| || |||||||||| ||||| ||| |||||||||||||||| |||||||   |||| |||| || |||||||||    
T  29963700 gagaagaagagagagaataaaaacaaatgtgagtataagagagatgattgtttcaaaagttgtcaaaaagtatatgtataaatatcgtttctctat 29963605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 13140287 - 13140369
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||| |||||||||| ||||||||||||||||||| |  ||||||||||||||||| ||||| |   ||||||||| ||||||    
T  13140287 gaagagagagaataaaaacacatgtgagtatgagagaga--gttgtttcaaaagttgtcaaaaaatagatgtacaaatatcattt 13140369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 53191016 - 53190929
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagaca---tggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    ||||| ||||||||||| ||||||||||||||  ||| |   ||||| || ||||||||||||||||||| |||||||||| ||||||    
T  53191016 gaagaaggagaataaaaacacatgtgagtatggaagagagggtggttattacaaaagttgttaaaaagtggttgtacaaatatcattt 53190929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 3078904 - 3078979
Alignment:
Q  24 taaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||| || |||||||||||||||| |  |||||  |||||||||||| ||| ||||||||||||| |||||||||    
T  3078904 taaaaacatatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgattgtacaaatatcatttctc 3078979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 45652728 - 45652665
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaa 75  Q
    |||||| |||||||||| ||||||||||||||||| | | | |||||||||||||||| |||||    
T  45652728 gaagagagagaataaaaacacatgtgagtatgagatagaggtttgtttcaaaagttgtcaaaaa 45652665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 50831761 - 50831828
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||  |  |||||| |||||||||| |||||||| |||||||||| ||||||||||    
T  50831761 atgtgagtatgagagggaaagttgttacaaaagttgtcaaaaagtggttgtacaaatatcatttctct 50831828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 17363268 - 17363222
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctctatttata 107  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||||    
T  17363268 aaaagttgtaataaagtgattgtacaaatatcatttctctatttata 17363222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 19899359 - 19899313
Alignment:
Q  50 atggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  19899359 atggttgcttcaaaagttgttaaaaagtggttgtacaaatatcattt 19899313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 32871813 - 32871899
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    |||||| ||||||||||  |||||||| ||||||||| ||| |||||||||||||||| || || |  | |||||||| ||||||||    
T  32871813 gaagagagagaataaaactacatgtgaatatgagagagatgattgtttcaaaagttgtcaagaaatagtggtacaaatatcatttct 32871899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 51957603 - 51957516
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    ||||||||||||||||  |||||||||||  ||||| |  ||| |||||| | ||||||||||||  |||||||||| ||||||||||||    
T  51957603 aagagggagaataaaaatacatgtgagtaaaagagaga--gttatttcaataattgttaaaaagtagttgtacaaatatcatttctctat 51957516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 961344 - 961275
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||||| |  ||||||||||||||| | ||||| | ||||||||||| | ||||||||    
T  961344 acatgtgagtatgagagagagagttgtttcaaaagttatcaaaaaattattgtacaaatattatttctct 961275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 12593603 - 12593684
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||| ||||||| ||||||||||| ||| || |||||||| |||| ||||| | ||| || |||| ||||||||||    
T  12593603 gagaataaaaacacatgtaagtatgagagaaatgattatttcaaaaattgtcaaaaaataattatataaatatcatttctct 12593684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 35748648 - 35748736
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||| |||||||||| ||||| ||||||||||||| ||| ||||| ||||| || | |||||||  |||| |||||  |||||||||    
T  35748648 gaagagagagaataaaaacacatctgagtatgagagatatgattgttccaaaaattatcaaaaagtagttgtgcaaataacatttctct 35748736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 40293318 - 40293237
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||||||| ||||||||||||||||||  | ||||||||||||| |||| ||||| |   ||||||||| ||||| ||||||    
T  40293318 gagaataaaaacacatgtgagtatgagag--agggttgtttcaaaaattgtcaaaaaattgatgtacaaatatcattcctctat 40293237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 51734617 - 51734705
Alignment:
Q  13 aagagggagaataaaagcaca-tgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| ||||||||||| ||| || |||||||||||| |  |||||  ||||||||||| ||||||| |||| ||||| ||||||||||    
T  51734617 aagagagagaataaaagtacaatgagagtatgagagagaaagttgtcacaaaagttgtttaaaagtggttgttcaaatatcatttctct 51734705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 42915253 - 42915292
Alignment:
Q  62 aaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  42915253 aaagttgtcaaaaagtgattgtacaaatatcatttctcta 42915292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 50291347 - 50291281
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| | |||||| | |||||||||  |||| ||||||||||||| ||||||||||    
T  50291347 atgtgagtatgagagagaaggttgtat-aaaagttgtacaaaaatgattgtacaaatatcatttctct 50291281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 5932769 - 5932835
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| |  |||||  |||||||||| |||||||| |||| ||||| |||||||||    
T  5932769 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctc 5932835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 15638200 - 15638158
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||    
T  15638200 caaaagttgtcaaaaaatgattgtacaaatatcatttctctat 15638158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 20760316 - 20760254
Alignment:
Q  38 agtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| ||||| || |||||  |||||||||||||||| | ||||||||||| ||||||||||    
T  20760316 agtataagagaaatagttgtcacaaaagttgttaaaaaataattgtacaaatatcatttctct 20760254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 20766707 - 20766645
Alignment:
Q  38 agtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| ||||| || |||||  |||||||||||||||| | ||||||||||| ||||||||||    
T  20766707 agtataagagaaatagttgtcacaaaagttgttaaaaaataattgtacaaatatcatttctct 20766645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 24045310 - 24045244
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| | ||||||  |||||||||| ||||| || |||| ||||| |||||||||    
T  24045310 atgtgagtatgagagagaaggttgtcgcaaaagttgtaaaaaattggttgtgcaaatatcatttctc 24045244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 40693628 - 40693694
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| | |||||| |||||| |||| ||||| | |||||| |||| |||||||||    
T  40693628 atgtgagtatgagagagaaggttgtctcaaaaattgtcaaaaattaattgtataaatatcatttctc 40693694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 2004214 - 2004263
Alignment:
Q  53 gttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||| |||||||||||||||| || |||| ||||| ||||||||||||    
T  2004214 gttgttgcaaaagttgttaaaaaatggttgttcaaatatcatttctctat 2004263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 10762486 - 10762575
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||| |||||||||| || |||||||||| | ||| |   |||||||||||||| | |||||||  ||||| |||| |||||||||||    
T  10762486 gaagagagagaataaaaacatatgtgagtataaaagagagaattgtttcaaaagttatcaaaaagtagttgtataaatatcatttctcta 10762575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 31804374 - 31804407
Alignment:
Q  73 aaagtgattgtacaaatttcatttctctatttat 106  Q
    ||||||||||||||||| ||||||||||||||||    
T  31804374 aaagtgattgtacaaatatcatttctctatttat 31804407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 46355299 - 46355375
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatttataatg 110  Q
    |||||||||||||||| |  ||||| | |||||||||  ||||||| |||||||||| |||||||||||  |||||||    
T  46355299 atgtgagtatgagagagaatgttgtat-aaaagttgtacaaaagtggttgtacaaatatcatttctctagatataatg 46355375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 3223055 - 3222988
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||| |  |||||  |||||||||| | ||| ||||||||||||| ||||||||||    
T  3223055 catgtgagtatgagagagaaagttgta-caaaagttgtcacaaattgattgtacaaatatcatttctct 3222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 25221755 - 25221795
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||||||||| ||||| | ||||||||||    
T  25221755 caaaagttgttaaaaagtgattatacaactatcatttctct 25221795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 32058360 - 32058404
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgt 57  Q
    ||||| |||||||||| ||||||||||||||||||| | ||||||    
T  32058360 aagagagagaataaaaacacatgtgagtatgagagaaagggttgt 32058404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 37514128 - 37514204
Alignment:
Q  24 taaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| || |||||||||||||||| |  |||||  |||||||||||| ||| ||  ||||||||| ||||||||||    
T  37514128 taaaaacatatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggatgtacaaatatcatttctct 37514204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 42815479 - 42815403
Alignment:
Q  24 taaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| || |||||||||||||||| |  |||||  |||||||||||| ||| |  |||||||||| ||||||||||    
T  42815479 taaaaacatatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttctct 42815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 44121212 - 44121248
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagaga 48  Q
    |||||| |||||||||| |||||||||||||||||||    
T  44121212 gaagagagagaataaaaacacatgtgagtatgagaga 44121248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 48494935 - 48494975
Alignment:
Q  62 aaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    ||||||||||||||||| |||| ||||| ||||||||||||    
T  48494935 aaagttgttaaaaagtggttgttcaaatatcatttctctat 48494975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 51255813 - 51255745
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||| |  |||||  |||||||||| ||||| || |||| ||||| ||||||||||    
T  51255813 catgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 51255745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 52372195 - 52372263
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||||||||| |||| | || ||| ||||||||||| | ||||| | ||||||||||| |||||||||    
T  52372195 acatgtgagtaagagatagatagttatttcaaaagttatcaaaaattaattgtacaaatatcatttctc 52372263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 30170713 - 30170806
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattta 105  Q
    |||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||| ||||    
T  30170713 gaagagagagaataaaaacacatgtgagtatgagagagatggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttctcttttta 30170806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 37379418 - 37379501
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatt 95  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||| |||||    
T  37379418 gaagagggagaataaaagcacatgtgagtatgagagagatggttgtttcaaaagttgtcaaaaagtggttctacaaatatcatt 37379501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 26629113 - 26629182
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  26629113 acatgtgagtatgagagagagggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttctct 26629182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 43066585 - 43066666
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||| ||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  43066585 gagaataaaaacacatatggatatgagagagatgattgtttcaaaagttgttaaaaagtggttgtacaaatatcatttctct 43066666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 14127331 - 14127254
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaat 89  Q
    |||||| |||||| ||| ||||||||||||||||||| ||||||||| ||||| |||| |||||||| ||||||||||    
T  14127331 gaagagagagaattaaaacacatgtgagtatgagagagatggttgttccaaaaattgtcaaaaagtggttgtacaaat 14127254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 16585372 - 16585437
Alignment:
Q  8 agatgaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaa 73  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||    
T  16585372 agatgaagagagagaataaaaacacatgtgagtatgagagagataattgtttcaaaagttgttaaa 16585437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 4721816 - 4721729
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||| |||||||||| ||||||||||||||||||| | |||||| || |||||||| ||||  || |||||||||| |||||||||    
T  4721816 gaagagagagaataaaaacacatgtgagtatgagagaaaaggttgtatccaaagttgtcaaaatttggttgtacaaatatcatttctc 4721729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 13592845 - 13592765
Alignment:
Q  20 agaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||| ||||||||||||||||||| |  ||||||||||||||||| ||||| |   ||||||||| ||||||||||    
T  13592845 agaataaaaacacatgtgagtatgagagatagagttgtttcaaaagttgtcaaaaaataggtgtacaaatatcatttctct 13592765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 28434529 - 28434442
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||||||||||||||| ||||||||||||| ||||| | | || | || |||||| | ||||  ||||||||||||| |||||||||    
T  28434529 gaagagggagaataaaaacacatgtgagtataagagagaggattatctccaaagttatcaaaatttgattgtacaaatatcatttctc 28434442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 3155888 - 3155842
Alignment:
Q  54 ttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  3155888 ttgttccaaaagttgttaaaaagtggttgtacaaatatcatttctct 3155842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 21526286 - 21526352
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| |    |||| ||||||||||||||||||| |||||||||| |||||||||    
T  21526286 atgtgagtatgagagagaaaactgttacaaaagttgttaaaaagtggttgtacaaatatcatttctc 21526352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 21467462 - 21467384
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||| ||||||||||||||||||  ||| |||||| ||||||||| ||||| | | |||| |||| |||||||||    
T  21467462 gagaataaaaacacatgtgagtatgagag--atgattgttttaaaagttgtcaaaaaataaatgtataaatatcatttctc 21467384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 15116976 - 15117012
Alignment:
Q  53 gttgtttcaaaagttgttaaaaagtgattgtacaaat 89  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15116976 gttgtttcaaaagttgttaaaaagtggttgtacaaat 15117012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 20996179 - 20996227
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctctatttataa 108  Q
    ||||||||||| |||| ||||||||||||| |||||||||| |||||||    
T  20996179 caaaagttgttcaaaaatgattgtacaaatatcatttctctttttataa 20996227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 7376571 - 7376505
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||| |||||||||||| ||| || |||||||||| ||||||||||    
T  7376571 atgtgagtatgagagagaaagttgtt-caaaagttgttagaaattggttgtacaaatatcatttctct 7376505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 25830251 - 25830322
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    |||||||||||||||| |  |||||  |||||||||||| ||| || |||||||||| ||||||||| ||||    
T  25830251 atgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctcaattt 25830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 35067226 - 35067159
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||  ||||||||||||| || || |||||||||| ||||||||||    
T  35067226 atgtgagtatgagagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctct 35067159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 29108032 - 29107994
Alignment:
Q  62 aaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  29108032 aaagttgttaaaaaatgattgtacaaatatcatttctct 29107994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 1158341 - 1158409
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||||||||||||| |  |||||| |||||||| ||| ||| || |||||||||| ||||||||||||    
T  1158341 atgtgagtatgagagagaaagttgtt-caaaagttattagaaattggttgtacaaatatcatttctctat 1158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 5742663 - 5742738
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatttataat 109  Q
    |||||||||||||||| |  |||||  ||||||||||   ||| || |||||||||| |||||||||||||||||||    
T  5742663 atgtgagtatgagagataaagttgta-caaaagttgtaccaaaatggttgtacaaatatcatttctctatttataat 5742738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 35792108 - 35792068
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||| ||||||| ||||||||||||| ||||||||||    
T  35792108 caaaagtttttaaaaaatgattgtacaaatatcatttctct 35792068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 36064069 - 36064025
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    |||||||||| | ||| ||||||||||||| ||||||||||||||    
T  36064069 caaaagttgtcacaaaatgattgtacaaatatcatttctctattt 36064025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 40102061 - 40102021
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    ||||||||| |||||||| |||||||||| |||||||||||    
T  40102061 aaaagttgtgaaaaagtggttgtacaaatatcatttctcta 40102021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 35883598 - 35883679
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||||    
T  35883598 gagaataaaaacacatgtgagtatgagagatatggttgtttcaaaagttgtcaaaaaataattgtacaaatatcatttctct 35883679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 31566888 - 31566777
Alignment:
Q  173 aacaagaaatgttggcgcaccatggtgtggaacgggaccacttaatgcccgaagaagaaataattaaatgtattgtacttttaaatgtgtcatattaaat 272  Q
    ||||||||||| ||| |||||||||| || |||  ||| || |||||||| ||||||||||| |||||||||||||| || |||||||||||| ||||||    
T  31566888 aacaagaaatgctggtgcaccatggtatgaaacaagacaacataatgcccaaagaagaaatatttaaatgtattgtatttgtaaatgtgtcatcttaaat 31566789  T
Q  273 aataaatatttt 284  Q
    || |||||||||    
T  31566788 aacaaatatttt 31566777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 283
Target Start/End: Original strand, 31569989 - 31570096
Alignment:
Q  176 aagaaatgttggcgcaccatggtgtggaacgggaccacttaatgcccgaagaagaaataattaaatgtattgtacttttaaatgtgtcatattaaataat 275  Q
    |||||||||||  |||| ||||| |||||| | ||||| |||||||| || |||||||| ||||||||||||||  |||||||||||||| |||||||||    
T  31569989 aagaaatgttgaggcactatggtatggaacagtaccacataatgcccaaaaaagaaatatttaaatgtattgtagctttaaatgtgtcatcttaaataat 31570088  T
Q  276 aaatattt 283  Q
    ||||||||    
T  31570089 aaatattt 31570096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 33694199 - 33694273
Alignment:
Q  22 aataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||| |||||||||||| ||||||    ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  33694199 aataaaaacacatgtgagtacgagaga----gttgttttaaaagttgttaaaaagtgattgtacaaatatcatttctct 33694273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 31568872 - 31568927
Alignment:
Q  104 tataatgactattatttgtttatttataaaaatgtaactcaattaattttaactaa 159  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  31568872 tataatgactattatttgtttatttataaaaacataactcaattagttttaactaa 31568927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 2279306 - 2279374
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgat 80  Q
    |||||| |||||||||| |||||||||  |||||||| || ||||||||||||||||| ||||||||||    
T  2279306 gaagagagagaataaaaacacatgtgaacatgagagagatagttgtttcaaaagttgtcaaaaagtgat 2279374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 1523285 - 1523364
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    |||||||||| ||||||| ||||||| ||| || ||| ||||||||||| | |||||||| |||||||||| ||||||||    
T  1523285 gagaataaaaacacatgtaagtatgacagagatagttatttcaaaagttatcaaaaagtggttgtacaaatatcatttct 1523364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 51231309 - 51231374
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||||||||||||||| |  |||||  ||||||||||||||||||| |||||||||| ||||||    
T  51231309 acatgtgagtatgagagagagagttgtgccaaaagttgttaaaaagtggttgtacaaatatcattt 51231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 40809557 - 40809498
Alignment:
Q  38 agtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    ||||||||||| |||||||||||||||||||| || |||| ||||||||||| ||||||||    
T  40809557 agtatgagagagatggttgtttcaaaagttgtcaataagt-attgtacaaatatcatttct 40809498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 48872444 - 48872369
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatttataat 109  Q
    |||||||||||||||| | |||||| | ||||||||| | |||||| |||||||||| |||||||||| ||||||||    
T  48872444 atgtgagtatgagagagaaggttgtct-aaaagttgtcataaagtggttgtacaaatatcatttctctttttataat 48872369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 30536057 - 30535990
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||  ||||| |||||||||| ||||||||||||| ||||||||||    
T  30536057 atgtgagtatgagagagaaagttgtcacaaaaattgttaaaaaatgattgtacaaatatcatttctct 30535990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 33675965 - 33675895
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    |||||||||||||||| |  |||||| |||| ||||| |||||||| |||||||||| ||||||||||||||    
T  33675965 atgtgagtatgagagagaaagttgttacaaa-gttgtcaaaaagtggttgtacaaatgtcatttctctattt 33675895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 42577514 - 42577471
Alignment:
Q  57 tttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  42577514 tttcaaaagttgttaaaatgtgattgtacaaatatcatttctct 42577471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 1922409 - 1922495
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    |||||| || ||||| | || |||||||||||||||| | ||||||  ||||| || | ||||||||||||||||||| ||||||||    
T  1922409 gaagagagaaaataataacatatgtgagtatgagagagagggttgtcacaaaaattatcaaaaagtgattgtacaaatatcatttct 1922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 25098794 - 25098859
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| | |||||| | ||||||||||| |||||| |||||||||| |||||||||    
T  25098794 atgtgagtatgagagagaaggttgtct-aaaagttgttacaaagtggttgtacaaatatcatttctc 25098859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 49931619 - 49931553
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||| ||||||||| |  |||||  |||||||||||||||| ||||||||||||| |||||||||    
T  49931619 atgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctc 49931553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 38519996 - 38520065
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| |||||||||| | || ||||||||||||||||| ||| | ||||||||||||| | ||||||||    
T  38519996 acatgcgagtatgagaaaaatagttgtttcaaaagttgtcaaataatgattgtacaaatattatttctct 38520065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 25989017 - 25989061
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctctattta 105  Q
    ||||||||||||||| || |||||||||| |||||||||||||||    
T  25989017 aaaagttgttaaaaaatggttgtacaaatatcatttctctattta 25989061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 3904264 - 3904225
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtt 58  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  3904264 gagaataaaaacacatgtgagtatgagagagatggttgtt 3904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 12021929 - 12022007
Alignment:
Q  21 gaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||  |||| |||||||||||||   |||||||||||||||||| ||||||| |||||| || | ||||||||||    
T  12021929 gaataaaaatacatttgagtatgagagatg-ggttgtttcaaaagttgtcaaaaagtaattgtaaaagtatcatttctct 12022007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 44672063 - 44672102
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  44672063 aaaagttgttaaaaaatgattgtacaaatatcatttctct 44672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 48858889 - 48858822
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||  |||||||||| |||||||| |||| ||||| ||||||||||    
T  48858889 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctct 48858822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 14983821 - 14983783
Alignment:
Q  62 aaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  14983821 aaagttgttaaaaagtggttgtacaaatatcatttctct 14983783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 49020409 - 49020475
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| |   ||||  |||||||||||||||| || |||||||||| |||||||||    
T  49020409 atgtgagtatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaatatcatttctc 49020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 5574265 - 5574329
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    |||||||||||||||| | ||||||  ||||||||||  |||| ||||||||||||| ||||||||    
T  5574265 atgtgagtatgagagagaaggttgta-caaaagttgtacaaaaatgattgtacaaatatcatttct 5574329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 49425802 - 49425736
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| |  |||||  |||||||||| | |||||| |||||||||| |||||||||||    
T  49425802 atgtgagtatgagagataaagttgt--caaaagttgtcacaaagtggttgtacaaatatcatttctcta 49425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 9566966 - 9567034
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| |  |||||  |||||||||| ||||| || |||| ||||| |||||||||||    
T  9566966 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctcta 9567034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 12999828 - 12999895
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| |  |||||  |||||||||||| ||| || |||||||||| |||||||||||    
T  12999828 atgtgagtatgagagagaaagttgta-caaaagttgttagaaaatggttgtacaaatatcatttctcta 12999895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 25130769 - 25130698
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    ||||||||||||||||| |  |||||  |||||||||| | ||| ||||||||||||| |||||| |||||||    
T  25130769 catgtgagtatgagagagaaagttgta-caaaagttgtcacaaattgattgtacaaatatcatttttctattt 25130698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 48983672 - 48983740
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||| |  |||||  |||||||||| ||||| || |||| ||||| ||||||||||    
T  48983672 catgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 48983740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 765 - 853
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||| ||||    
T  765 gaagagagagaattaaaacacatgtgagtatgagagagatggttgtttcaaaagttgtcaaaaaatgattgtacaaatatcattcctct 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 41621919 - 41621999
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  41621919 gagaataaaagcacatgtaagtatgagagatgtggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttctc 41621999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 30838356 - 30838437
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||   ||||||||| ||||||||||    
T  30838356 gagaataaaaacacatgtgagtatgagagagatggttgtttcaaaagttgtcaaaaagtagatgtacaaatatcatttctct 30838437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 43057522 - 43057433
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||| |||||||||| || ||||||||||||||||    ||| ||||||||||||| |||||||| |||||||||| |||||||||||    
T  43057522 gaagagagagaataaaaacatatgtgagtatgagagagggagttatttcaaaagttgtcaaaaagtggttgtacaaatatcatttctcta 43057433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 8728565 - 8728652
Alignment:
Q  14 agagggagaataaaagcacatgtgagtatgagagacat--ggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||| ||||||||||  ||||||||||| |||||| |   |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  8728565 agagagagaataaaattacatgtgagtacgagagagagagggttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttctc 8728652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 26754629 - 26754709
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||| ||||||||||||||||||| | |||||| || |||||||| ||||  || |||||||||| |||||||||    
T  26754629 gagaataaaaacacatgtgagtatgagagagagggttgtctccaaagttgtcaaaatttggttgtacaaatatcatttctc 26754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 34270511 - 34270591
Alignment:
Q  21 gaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||| || |||||||||| ||||| | | |||||||||||||||||||||| |  |||||||||| |||||||||||    
T  34270511 gaataaaaacaaatgtgagtattagagaaaagattgtttcaaaagttgttaaaaatttgttgtacaaatatcatttctcta 34270591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 11306761 - 11306691
Alignment:
Q  35 gtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatttat 106  Q
    |||||||||||||| |  |||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  11306761 gtgagtatgagagagaaagttgttacaaa-gttgttaaaaagtgattgtacaaatatcatttctcaatttat 11306691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 15004709 - 15004795
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||| ||||||||||  |||  ||||||||||||| ||| ||||||||||| |||| |||||||| |||| ||||| |||||||||    
T  15004709 aagagagagaataaaaaaacaaatgagtatgagagagatgattgtttcaaaaattgtcaaaaagtggttgtccaaatatcatttctc 15004795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 34674942 - 34674868
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaa 87  Q
    ||||||||||||||||  ||||| |||||||||| | |||||||||| |||||||||  ||||||| ||||||||    
T  34674942 aagagggagaataaaaatacatgcgagtatgagaaagatggttgttttaaaagttgtcgaaaagtggttgtacaa 34674868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 2629906 - 2629818
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacat--ggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||| ||||||||||  |||||||| ||||||||| |   |||||||||||||||||| ||||| || |||||||||| |||||||||    
T  2629906 aagagagagaataaaaaaacatgtgaatatgagagagagaaggttgtttcaaaagttgtcaaaaaatggttgtacaaatatcatttctc 2629818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 38097847 - 38097782
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||||||||||||||| ||  |||||||||||||||||||||| | |||||||| || ||||||    
T  38097847 acatgtgagtatgagagagataattgtttcaaaagttgttaaaaaataattgtacagatatcattt 38097782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 844120 - 844033
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||| |||||||||  ||||||||| ||||||||| ||   ||||||||||||||| ||||| || |||| ||||| ||||||||||||    
T  844120 gaagagagagaataaatacacatgtgaatatgagagagat---tgtttcaaaagttgtcaaaaaatggttgtgcaaatatcatttctctat 844033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 11880993 - 11881064
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattta 105  Q
    |||||||||||||||| |  ||||| | ||||||||||||||| | ||||||||||| |||||||||||||||    
T  11880993 atgtgagtatgagagagaaagttgtct-aaaagttgttaaaaaataattgtacaaatatcatttctctattta 11881064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 11148577 - 11148510
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||  |||||||||| ||||| ||||||||||||| ||||||||||    
T  11148577 atgtgagtatgagagagaatgttgtcacaaaagttgtcaaaaattgattgtacaaatatcatttctct 11148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 4719716 - 4719650
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| | ||||||  |||||||||| ||||| || |||||||||| |||||||||    
T  4719716 atgtgagtatgagagaaaaggttgtcacaaaagttgtcaaaaattggttgtacaaatatcatttctc 4719650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 17063930 - 17063865
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| |  ||||||| ||||||||| ||||| ||||||||||||| |||||||||    
T  17063930 atgtgagtatgagagataaagttgttt-aaaagttgtcaaaaaatgattgtacaaatatcatttctc 17063865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 18695393 - 18695316
Alignment:
Q  24 taaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    ||||| || |||||||||||||||| |  |||||  |||||||||||| ||| || |||||||||| |||||||||||    
T  18695393 taaaaacatatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctcta 18695316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 611930 - 611863
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||  |||||||||| ||||||| ||||| ||||| ||||||||||    
T  611930 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtaattgttcaaatatcatttctct 611863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 14780426 - 14780493
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||||| |  ||| ||||||||||||| |||||||   ||||||||| ||||||||||    
T  14780426 acatgtgagtatgagagaga--gttatttcaaaagttgtcaaaaagtagatgtacaaatatcatttctct 14780493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 22098321 - 22098255
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| |  |||||  |||||||||||| ||| || |||||||||| |||||||||    
T  22098321 atgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 22098255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 35570887 - 35570813
Alignment:
Q  25 aaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||| ||||||||||||||||||| | |||||| | ||||||| | ||||  | ||||||||||| |||||||||    
T  35570887 aaaaacacatgtgagtatgagagagagggttgtctaaaaagttatcaaaatttaattgtacaaatatcatttctc 35570813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 41460181 - 41460116
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| |  ||||||| ||||||||| ||||| |||||||| |||| |||||||||    
T  41460181 atgtgagtatgagagataaagttgttt-aaaagttgtcaaaaaatgattgtataaatatcatttctc 41460116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 1293118 - 1293158
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| || |||||||||| ||||||||||    
T  1293118 caaaagttgttaaaaaatggttgtacaaatatcatttctct 1293158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 16690565 - 16690493
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattta 105  Q
    |||||||||||| ||| |  |||||  ||||||||||||| || || |||||||||| ||||||||| |||||    
T  16690565 atgtgagtatgaaagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctcaattta 16690493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 27487926 - 27487886
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| ||||||| ||||| ||||||||||    
T  27487926 caaaagttgttaaaaattgattgttcaaatatcatttctct 27487886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 29806986 - 29807075
Alignment:
Q  12 gaagagggagaataaaagcaca-tgtgagtatgagagacatggttgtttcaaaag-ttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||| ||||||||||| | | ||||||||||||||| |  |||||  |||||| |||||||||| || |||||||||| |||||||||||    
T  29806986 gaagagagagaataaaagtatactgtgagtatgagagagaaagttgt--caaaagattgttaaaaaatggttgtacaaatgtcatttctcta 29807075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 35475861 - 35475813
Alignment:
Q  54 ttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctat 102  Q
    |||||| ||||||||||||||| ||||||||| ||| ||| ||||||||    
T  35475861 ttgtttaaaaagttgttaaaaaatgattgtacgaatatcaattctctat 35475813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 8352854 - 8352773
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||| ||||| |||| ||||||||||    
T  8352854 gagaataaaagcacatgtaagtatgagagagatggttgtttcaaaaattgtcaaaaagtggttgtataaatatcatttctct 8352773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 6892617 - 6892704
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||| |||||||||| ||||||||||||||||||| | |||||||||| ||||||| ||| |||| |||||||||| |||||||||    
T  6892617 gaagagagagaataaaaacacatgtgagtatgagagagagggttgtttcataagttgtcaaagagtggttgtacaaatatcatttctc 6892704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 48395340 - 48395247
Alignment:
Q  7 gagatgaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||| |||||| |||||||||| || |||||||||| ||||| |  ||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  48395340 gagaagaagagagagaataaaaacatatgtgagtataagagagagagttgtttcaaaagttgtcaaaaagtggttgtacaaatatcatttctct 48395247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 22588945 - 22589027
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcat 94  Q
    |||||| || |||||||||||||||||||||||||||   |||||||||||||||||| ||||| || |||||||||| ||||    
T  22588945 gaagagagataataaaagcacatgtgagtatgagagagggggttgtttcaaaagttgtcaaaaaatggttgtacaaatatcat 22589027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 11813431 - 11813339
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattta 105  Q
    ||||| || ||||||| ||||||||||||||||||| |  ||||||| |||||||||||||||||   ||||||||| | |||||||||||||    
T  11813431 aagagagaaaataaaaacacatgtgagtatgagagaaagtgttgtttaaaaagttgttaaaaagtaggtgtacaaatattatttctctattta 11813339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 17909036 - 17909120
Alignment:
Q  14 agagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    |||| |||||||||| |||||||||||| |||||| | |||| ||||||||||||| ||||| ||||||||||||| | ||||||    
T  17909036 agagagagaataaaaacacatgtgagtacgagagagagggttatttcaaaagttgtcaaaaaatgattgtacaaatattatttct 17909120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 47925417 - 47925341
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatt 95  Q
    |||||| ||| ||||||||||||||||||| | ||||||| |||||||||||||| |||| |||||||||| |||||    
T  47925417 gagaattaaaacacatgtgagtatgagagagagggttgttccaaaagttgttaaagagtggttgtacaaatatcatt 47925341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 48314352 - 48314432
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||| | ||||| ||||||||||| | |||||||  |||||||||||||||||| |||||||||| |||||||||    
T  48314352 gagaataaaaactcatgtaagtatgagagagagggttgttgtaaaagttgttaaaaagtggttgtacaaatatcatttctc 48314432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 42663406 - 42663483
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||||||| ||||||||||||||||| | | | ||||||||||||||||  |||| |||||||| |||| ||||||    
T  42663406 gagaataaaaacacatgtgagtatgagatataggattgtttcaaaagttgtcgaaaattgattgtaaaaatatcattt 42663483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 27306010 - 27306066
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgt 69  Q
    ||||| |||||||||| ||||||||||||||||||| | | ||||||||||||||||    
T  27306010 aagagagagaataaaaacacatgtgagtatgagagagaggattgtttcaaaagttgt 27306066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 24957182 - 24957257
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcat 94  Q
    |||||||||| ||||||||||||||||||| | ||||||  ||||| |||| |||||||| ||||| |||| ||||    
T  24957182 gagaataaaaacacatgtgagtatgagagagagggttgtgccaaaaattgtcaaaaagtggttgtataaatatcat 24957257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 7212647 - 7212738
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtat----gagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||| |||||||||| |||||||||||||    |||||| |  ||||||| ||||||||| |||||||  |||||||||| |||||||||    
T  7212647 gaagagagagaataaaaacacatgtgagtatgagagagagagaaagttgttttaaaagttgtgaaaaagtagttgtacaaatatcatttctc 7212738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 23816366 - 23816284
Alignment:
Q  14 agagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||| ||| |||||| |||||| || ||| | ||| | ||||||| ||||||||||||||||||||||||| |||| ||||||    
T  23816366 agagagaggataaaaacacatgcgaatataaaagagacggttgttccaaaagttgttaaaaagtgattgtataaatatcattt 23816284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 34820695 - 34820634
Alignment:
Q  14 agagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaa 75  Q
    |||| |||||||||| || |||||||||||||| | | |||||||||||||||||| |||||    
T  34820695 agagagagaataaaaacaaatgtgagtatgagatagagggttgtttcaaaagttgtaaaaaa 34820634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 6427274 - 6427210
Alignment:
Q  35 gtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||| | |||||||  ||||||||| |||||||| ||||| |||| |||||||||    
T  6427274 gtgagtatgagagagagggttgttctaaaagttgtcaaaaagtggttgtataaatatcatttctc 6427210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 11503561 - 11503641
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||| |||||||||| | |||||||||||||||||    |||||| || ||||||| |||| ||| |||||||||| ||||||    
T  11503561 gaagagagagaataaaaacgcatgtgagtatgagaga----gttgttccataagttgtcaaaatgtggttgtacaaatatcattt 11503641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 37392108 - 37392042
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  ||||||| ||||||||| ||||| || |||||||||| ||||||||||    
T  37392108 atgtgagtatgagagataaagttgttt-aaaagttgtcaaaaaatggttgtacaaatatcatttctct 37392042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 46148231 - 46148161
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    |||||||||||||||| |   |||||||||| ||||| ||||| ||||| ||||||| ||||||||||||||    
T  46148231 atgtgagtatgagagataaacttgtttcaaa-gttgtcaaaaaatgattttacaaatatcatttctctattt 46148161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 34978362 - 34978296
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||| |  |||||  ||||| |||| ||||||||||||| ||||| |||||||||    
T  34978362 atgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaagtgattgttcaaatatcatttctc 34978296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 8459651 - 8459614
Alignment:
Q  62 aaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  8459651 aaagttgttaaaaagtggttgtacaaatatcatttctc 8459614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 38340388 - 38340453
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttct 98  Q
    |||||||||||||||| |  |||||  |||||||||||||||| || || ||||||| ||||||||    
T  38340388 atgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgcttttacaaatatcatttct 38340453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 46829554 - 46829473
Alignment:
Q  24 taaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattta 105  Q
    ||||| || |||||||||||||||| |  |||||  ||||| |||||| ||| || |||||||||| |||||||||| ||||    
T  46829554 taaaaacatatgtgagtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctcttttta 46829473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 2008863 - 2008931
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    ||||| |||||||||| |  |||||  |||||||||| |||||||| |||| ||||| |||||||||||    
T  2008863 atgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctcta 2008931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 9363426 - 9363386
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||| ||| ||||||||||||| ||||||||||    
T  9363426 caaaagttgttataaaatgattgtacaaatatcatttctct 9363386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 9792853 - 9792765
Alignment:
Q  13 aagagggagaataaaagcaca-tgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| ||||||||||| ||| || |||||||||||| |  ||| |  ||||||||||| ||||||| |||| ||||| ||||||||||    
T  9792853 aagagagagaataaaagtacaatgagagtatgagagagaaagttatcacaaaagttgtttaaaagtggttgttcaaatatcatttctct 9792765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 12007190 - 12007258
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||| |  |||||  |||||||||| ||||| || |||| ||||| ||||||||||    
T  12007190 catgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 12007258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 13437263 - 13437188
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatttataat 109  Q
    |||||||||||||||| |  |||||| |||||||||| | ||| || |||| ||||| |||||||||||||| ||||    
T  13437263 atgtgagtatgagagaaaaagttgtt-caaaagttgtcacaaaatggttgtgcaaatatcatttctctatttttaat 13437188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 21752696 - 21752656
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    ||||||||| | ||||||||||||||||| |||||||||||    
T  21752696 aaaagttgtgagaaagtgattgtacaaatatcatttctcta 21752656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 42584868 - 42584800
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| |  |||||  |||||||||||| ||| || ||||||| || |||||||||||    
T  42584868 atgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacatatatcatttctcta 42584800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 20029341 - 20029264
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| |||| ||||||    
T  20029341 gagaataaaaacacatgtgagtatgagagagaaggttgtttcaaaagttgttaaaaagtggttgtataaatatcattt 20029264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 38683 - 38598
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttc 97  Q
    |||||| ||||||||||  |||||||||||||||||| | ||||||||| |||||||| ||||  || |||||||||| |||||||    
T  38683 gaagagagagaataaaaatacatgtgagtatgagagagagggttgtttccaaagttgtcaaaatttggttgtacaaatatcatttc 38598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 13093715 - 13093629
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatgg--ttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||| |||||||||| ||||| ||||||||||||| |  |  |||||||||||||||| |||||||| |||||||||| ||||||    
T  13093715 gaagagagagaataaaaacacatatgagtatgagagagagagagttgtttcaaaagttgtcaaaaagtggttgtacaaatatcattt 13093629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 31883309 - 31883376
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||  |  |||||| |||||||||| |||||||| |||||||||| ||||||||||    
T  31883309 atgtgagtatgagaggaaaagttgttacaaaagttgtcaaaaagtggttgtacaaatatcatttctct 31883376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 33683577 - 33683524
Alignment:
Q  22 aataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaa 75  Q
    ||||||| ||||||||||||||||||| | ||| |||||||||||||| |||||    
T  33683577 aataaaaacacatgtgagtatgagagagagggtagtttcaaaagttgtcaaaaa 33683524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 34792087 - 34792020
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| | ||||||  ||||||||||  |||| ||||||||||||| |||||||||||    
T  34792087 atgtgagtatgagagagaaggttgta-caaaagttgtacaaaaatgattgtacaaatatcatttctcta 34792020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 9188950 - 9189016
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  ||||| | ||||||||||||||| || |||||||||| ||||||||||    
T  9188950 atgtgagtatgagagataaagttgtct-aaaagttgttaaaaaatggttgtacaaatatcatttctct 9189016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 10840805 - 10840722
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatt 95  Q
    |||||| |||||| ||  |||| |||||||||||||| | | ||||| |||||||||| ||||| | ||||||||||| |||||    
T  10840805 gaagagagagaattaatacacaagtgagtatgagagagaggattgttccaaaagttgtcaaaaaataattgtacaaatatcatt 10840722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 17551384 - 17551451
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||| |||||||||| ||||| || |||| ||||| ||||||||||    
T  17551384 atgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 17551451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 1196095 - 1196057
Alignment:
Q  62 aaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  1196095 aaagttgtcaaaaagtgattgtacaaatatcatttctct 1196057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 18065095 - 18065161
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    ||||| |||||||||| |  |||||  |||||||||| ||||||||||||| ||||| |||||||||    
T  18065095 atgtgtgtatgagagaaaaagttgtcacaaaagttgtcaaaaagtgattgttcaaatatcatttctc 18065161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 10944542 - 10944579
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttg 68  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  10944542 acatgtgagtatgaaagaaatggttgtttcaaaagttg 10944579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 31204801 - 31204882
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||| ||||| ||| ||||||||| |  ||| ||||||||||| | ||||| || ||||| |||| ||||||||||    
T  31204801 gagaataaaaacacatatgaatatgagagagagagttatttcaaaagttatcaaaaaatggttgtagaaatatcatttctct 31204882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 2242027 - 2242099
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattta 105  Q
    |||||||||||||||| |  |||||  ||||| |||| ||||| ||||||| ||||| |||||||||| ||||    
T  2242027 atgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttctcttttta 2242099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 25109123 - 25109040
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatt 103  Q
    |||||||||| ||||||||||||||||||| | | |||| || |||||||| ||||  | | ||||||||| || ||||||||||    
T  25109123 gagaataaaaacacatgtgagtatgagagaga-gattgtctctaaagttgtcaaaatttaactgtacaaatatcgtttctctatt 25109040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 9326969 - 9327056
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||| ||||||||||  |||||||||||||||| | ||||||||||||||||||||  |||| ||||||||||||| |||||||||    
T  9326969 gaagagagagaataaaaagacatgtgagtatgagatagatggttgtttcaaaagttgtcgaaaattgattgtacaaatatcatttctc 9327056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 41448163 - 41448252
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    |||||| ||||||||||   ||||||||||||||||| | ||||||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  41448163 gaagagagagaataaaa---catgtgagtatgagagagagggttgtttcaaaagttgtttaaaaatggttgtacaaatatcatttctctattt 41448252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 31143350 - 31143269
Alignment:
Q  19 gagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||| ||||||||||||| ||||| ||| |||||||||||||||| ||||| ||||||||||||| ||| ||||||    
T  31143350 gagaataaaaacacatgtgagtattagagagatgattgtttcaaaagttgtcaaaaaatgattgtacaaatatcacttctct 31143269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 47187512 - 47187592
Alignment:
Q  20 agaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||| ||| ||||||| ||||||||||| | |||||||||||||||||| ||||||| ||||||||||| ||||| ||||    
T  47187512 agaattaaaacacatgtaagtatgagagaaagggttgtttcaaaagttgtgaaaaagtaattgtacaaatatcattcctct 47187592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 19623238 - 19623324
Alignment:
Q  14 agagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||| ||||||||||  |||||| ||||||||||| ||  |||||| ||||||| | ||||||||||||||||||| ||||||||||    
T  19623238 agagagagaataaaaagacatgtaagtatgagagagattattgttttaaaagttatcaaaaagtgattgtacaaatatcatttctct 19623324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 48335297 - 48335235
Alignment:
Q  13 aagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaa 75  Q
    |||||||||||||||| ||||||||||||||||||| | |||| || ||||||||||||||||    
T  48335297 aagagggagaataaaaccacatgtgagtatgagagagaaggttattccaaaagttgttaaaaa 48335235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 6977015 - 6976942
Alignment:
Q  14 agagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaa 87  Q
    |||| |||||||||| | ||||||||||||| ||| | |||||||| ||||||||| |||||||||||||||||    
T  6977015 agagagagaataaaaacgcatgtgagtatgatagagagggttgttttaaaagttgtcaaaaagtgattgtacaa 6976942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 11323994 - 11323912
Alignment:
Q  12 gaagagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcattt 96  Q
    |||||| |||||||||| ||||||  ||||||||||| |  ||||| |||||||||||||||||||| |||||||||| ||||||    
T  11323994 gaagagagagaataaaaacacatggaagtatgagagaga--gttgtatcaaaagttgttaaaaagtggttgtacaaatatcattt 11323912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 34271523 - 34271569
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctctatttata 107  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  34271523 aaaagttgttacaaagtggttgtacaaatatcatttctctatttata 34271569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 39284663 - 39284738
Alignment:
Q  22 aataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||  |||| ||||||||||||| |  ||||||||||||||||| ||||||||| | ||||||| |||||||||    
T  39284663 aataaaaatacatatgagtatgagagaga--gttgtttcaaaagttgtcaaaaagtgaatatacaaatatcatttctc 39284738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 41851019 - 41850945
Alignment:
Q  23 ataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttc 97  Q
    |||||| |||| |||||||||||||  | |||||||||||||||||| ||||  || |||||||||| |||||||    
T  41851019 ataaaaacacaagtgagtatgagagggagggttgtttcaaaagttgtcaaaatatggttgtacaaatatcatttc 41850945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 19150351 - 19150392
Alignment:
Q  60 caaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  19150351 caaaagttgttaaaaaatgattgtacaaatatcatttctcta 19150392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 29573352 - 29573432
Alignment:
Q  24 taaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    ||||| || |||||||||||||||| |  |||||  |||||||||||| ||| || |||||||||| ||||||||| ||||    
T  29573352 taaaaacatatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctcaattt 29573432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 8949790 - 8949833
Alignment:
Q  58 ttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||    
T  8949790 ttcaaaagttgttataaaatgattgtacaaatctcatttctcta 8949833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 27718780 - 27718859
Alignment:
Q  22 aataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    ||||||| || |||||||||||||||| |  |||||  |||||||||||| ||| ||||| ||||| | |||||||||||    
T  27718780 aataaaaacatatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatgattatacaagtatcatttctcta 27718859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 37894248 - 37894315
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||  |||||||||||| ||| || |||||||||| ||||||||||    
T  37894248 atgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctct 37894315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 38359339 - 38359378
Alignment:
Q  61 aaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  38359339 aaaagttgttaaaaaatgattgtacaaatatcatttctct 38359378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 48405476 - 48405409
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    |||||||||||||||| |  |||||| |||||||||| | ||| || |||||||||| ||||||||||    
T  48405476 atgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctct 48405409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 36869843 - 36869912
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatt 103  Q
    |||||||||||||||| |  ||||| | ||||||||| ||||| || |||||||||| |||||||||||||    
T  36869843 atgtgagtatgagagagaaagttgtct-aaaagttgtcaaaaaatggttgtacaaatatcatttctctatt 36869912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 15927578 - 15927642
Alignment:
Q  12 gaagagggagaataaaagcaca-tgtgagtatgagagacatggttgtttcaaaagttgttaaaaa 75  Q
    |||||| ||||||||||| ||| || |||||||||||| |  |||||| ||||||||||||||||    
T  15927578 gaagagagagaataaaagtacaatgagagtatgagagagagagttgttacaaaagttgttaaaaa 15927642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 27162474 - 27162541
Alignment:
Q  32 catgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctct 100  Q
    ||||||||||||||||| |  |||||| |||||||||||| ||| || |||||||||| ||| ||||||    
T  27162474 catgtgagtatgagagagaaagttgtt-caaaagttgttacaaaatggttgtacaaatatcacttctct 27162541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 29917029 - 29917097
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| |  |||||  ||||||||||||  || ||||||||||||| | |||||||||    
T  29917029 atgtgagtatgagagagaaagttgtcacaaaagttgttaggaaatgattgtacaaatattatttctcta 29917097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 29966182 - 29966250
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| |  |||||  ||||||||||||  || ||||||||||||| | |||||||||    
T  29966182 atgtgagtatgagagagaaagttgtcacaaaagttgttaggaaatgattgtacaaatattatttctcta 29966250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 41442240 - 41442172
Alignment:
Q  31 acatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctc 99  Q
    |||||||||||||||||| | |||||||  ||||||| | ||||| || ||||||||||  ||||||||    
T  41442240 acatgtgagtatgagagagaaggttgttgtaaaagttatcaaaaaatggttgtacaaataccatttctc 41442172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 44813453 - 44813522
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctattt 104  Q
    |||||||||||||||| |  |||||  |||||||||||| ||| |||||||||| || ||||||||| ||||    
T  44813453 atgtgagtatgagagaga--gttgtcacaaaagttgttagaaaatgattgtacatatatcatttctcaattt 44813522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 6525 - 6593
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||||| |  |||||  |||||||||||||||| ||||||| ||||| |||||||||||    
T  6525 atgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgattgttcaaatatcatttctcta 6593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 15194 - 15261
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    |||||||||||||| | |  |||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  15194 atgtgagtatgagaaagaaagttgttacaaa-gttgttaaaaagtgattgtacaaatatcatttctcta 15261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 5629 - 5565
Alignment:
Q  25 aaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaat 89  Q
    |||| ||||||||||||||||||| || ||||||| || |||||| |||||||| || |||||||    
T  5629 aaaaacacatgtgagtatgagagaaattgttgtttaaagagttgtcaaaaagtggttctacaaat 5565  T

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Target: scaffold0178 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 11539 - 11614
Alignment:
Q  14 agagggagaataaaagcacatgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaat 89  Q
    |||| |||||||||| ||||| ||||||||||||| |   |||||||||||||||| ||||| | | |||||||||    
T  11539 agagagagaataaaaacacatttgagtatgagagagagaattgtttcaaaagttgtcaaaaaataaatgtacaaat 11614  T

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Target: scaffold0392 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 12243 - 12321
Alignment:
Q  22 aataaaagcacatgtgagtatgagagacatggttgtttcaaaa-gttgttaaaaagtgattgtacaaatttcatttctcta 101  Q
    ||||||| ||||||||||||| ||||| |  ||||||| |||| |||||||||||||  ||| |||||| |||||||||||    
T  12243 aataaaaacacatgtgagtataagagaga--gttgttttaaaaagttgttaaaaagtagttgcacaaatatcatttctcta 12321  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 11002 - 10929
Alignment:
Q  33 atgtgagtatgagagacatggttgtttcaaaagttgttaaaaagtgattgtacaaatttcatttctctatttat 106  Q
    |||||||||||||||| |  |||||  |||||||||| |||||||| |||| ||| | |||||||||| |||||    
T  11002 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaattatcatttctctttttat 10929  T

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