View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19908_low_5 (Length: 241)
Name: NF19908_low_5
Description: NF19908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19908_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 36884970 - 36885194
Alignment:
| Q |
1 |
ttgctttctgagtaattcaagttctggctttgaggatgcagtttgttcaaacggattgcaacaagtagtgccacacctgcagccactagtgttcctccac |
100 |
Q |
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| T |
36884970 |
ttgctttctgagtaattcaagttctggctttgaggatgcagtttgttcaaacggattgcaacaagtagtgccagacctgcagccactagtgttcctccac |
36885069 |
T |
|
| Q |
101 |
caactataagagcgattcctccaggacctaattttttcttcttaggcttgtgctcacttactaccggaggagcatagttcttgatggcatttgcattagt |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36885070 |
caactataagagcaattcctccaggacctaattttttcttcttaggcttgtgctcacttactaccggaggagcatagttcttgatggcatttgcattagt |
36885169 |
T |
|
| Q |
201 |
tgtgggtgggtgactaatattatgt |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
36885170 |
tgtgggtgggtgactaatattatgt |
36885194 |
T |
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