View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19909_high_2 (Length: 684)

Name: NF19909_high_2
Description: NF19909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19909_high_2
NF19909_high_2
[»] chr4 (50 HSPs)
chr4 (7-281)||(23360558-23360824)
chr4 (535-668)||(23360170-23360300)
chr4 (527-660)||(2760855-2760989)
chr4 (544-660)||(44232223-44232339)
chr4 (556-661)||(50205742-50205847)
chr4 (544-653)||(12625258-12625367)
chr4 (544-661)||(35381040-35381157)
chr4 (544-661)||(38416796-38416913)
chr4 (544-661)||(43967722-43967839)
chr4 (544-662)||(47386432-47386550)
chr4 (402-468)||(23360369-23360435)
chr4 (544-660)||(29830343-29830459)
chr4 (544-660)||(36523114-36523230)
chr4 (544-663)||(7614612-7614731)
chr4 (544-651)||(25296726-25296833)
chr4 (557-660)||(39307696-39307799)
chr4 (544-650)||(12240324-12240430)
chr4 (544-629)||(54330836-54330922)
chr4 (559-663)||(20875408-20875512)
chr4 (544-660)||(26169986-26170102)
chr4 (544-660)||(55209720-55209836)
chr4 (555-650)||(3036990-3037085)
chr4 (544-650)||(38716897-38717002)
chr4 (555-629)||(55800864-55800939)
chr4 (544-629)||(17610310-17610396)
chr4 (535-629)||(34316551-34316645)
chr4 (544-645)||(38721352-38721453)
chr4 (544-629)||(45291862-45291948)
chr4 (527-629)||(31010244-31010351)
chr4 (555-629)||(27407776-27407851)
chr4 (544-650)||(35686383-35686489)
chr4 (544-629)||(26125738-26125824)
chr4 (577-661)||(5428577-5428661)
chr4 (536-628)||(10550455-10550550)
chr4 (555-651)||(55191833-55191929)
chr4 (555-622)||(2571039-2571107)
chr4 (562-661)||(29051683-29051782)
chr4 (556-652)||(30446306-30446401)
chr4 (544-650)||(19433504-19433614)
chr4 (555-621)||(19903807-19903874)
chr4 (555-649)||(25101731-25101825)
chr4 (544-629)||(17446779-17446865)
chr4 (558-616)||(29586005-29586063)
chr4 (555-644)||(56297859-56297948)
chr4 (527-660)||(9029574-9029714)
chr4 (544-629)||(25918233-25918319)
chr4 (562-651)||(34652211-34652300)
chr4 (544-649)||(27755730-27755839)
chr4 (544-603)||(14144603-14144663)
chr4 (573-660)||(19897639-19897726)
[»] chr1 (33 HSPs)
chr1 (527-662)||(6766370-6766506)
chr1 (544-663)||(36757632-36757751)
chr1 (527-661)||(42735290-42735431)
chr1 (555-658)||(28030838-28030941)
chr1 (544-663)||(30003530-30003649)
chr1 (544-662)||(11641213-11641331)
chr1 (544-661)||(6402556-6402673)
chr1 (544-660)||(9342791-9342907)
chr1 (544-660)||(16120586-16120702)
chr1 (556-660)||(36399098-36399202)
chr1 (535-663)||(27984553-27984680)
chr1 (527-663)||(24321256-24321398)
chr1 (544-662)||(40771918-40772036)
chr1 (555-645)||(44644512-44644602)
chr1 (544-629)||(17305984-17306070)
chr1 (556-661)||(30701717-30701822)
chr1 (544-645)||(44647859-44647960)
chr1 (556-661)||(52024025-52024130)
chr1 (538-622)||(30385285-30385370)
chr1 (562-629)||(26910106-26910174)
chr1 (544-649)||(38153423-38153528)
chr1 (544-629)||(40977634-40977720)
chr1 (544-629)||(42788688-42788774)
chr1 (558-650)||(3485367-3485459)
chr1 (527-629)||(4302148-4302252)
chr1 (402-469)||(25695557-25695624)
chr1 (544-649)||(40800533-40800638)
chr1 (544-590)||(22575733-22575779)
chr1 (544-651)||(15382572-15382679)
chr1 (564-621)||(16689862-16689920)
chr1 (544-629)||(27292670-27292756)
chr1 (555-629)||(25695427-25695505)
chr1 (558-590)||(34634977-34635009)
[»] chr2 (35 HSPs)
chr2 (544-660)||(7799847-7799963)
chr2 (527-661)||(2183085-2183220)
chr2 (527-651)||(6223075-6223203)
chr2 (544-660)||(7608049-7608165)
chr2 (544-661)||(19141212-19141329)
chr2 (544-660)||(8042168-8042284)
chr2 (544-667)||(24093682-24093806)
chr2 (544-651)||(5405005-5405112)
chr2 (538-661)||(42133751-42133874)
chr2 (544-629)||(11841739-11841825)
chr2 (544-661)||(39358145-39358262)
chr2 (555-651)||(19262689-19262785)
chr2 (555-650)||(11931701-11931796)
chr2 (544-651)||(44365166-44365273)
chr2 (555-661)||(9006941-9007047)
chr2 (555-627)||(22839084-22839157)
chr2 (578-651)||(13598451-13598523)
chr2 (555-649)||(43444697-43444791)
chr2 (544-629)||(36072204-36072290)
chr2 (536-613)||(24252006-24252086)
chr2 (555-613)||(16865100-16865159)
chr2 (544-618)||(38291993-38292068)
chr2 (544-603)||(9172292-9172352)
chr2 (536-592)||(24607836-24607891)
chr2 (557-620)||(31610812-31610876)
chr2 (562-629)||(33607406-33607474)
chr2 (555-590)||(38839143-38839178)
chr2 (562-624)||(44644905-44644968)
chr2 (536-628)||(36177715-36177809)
chr2 (557-621)||(13117483-13117548)
chr2 (536-616)||(31904018-31904099)
chr2 (555-618)||(44563154-44563219)
chr2 (559-622)||(7666127-7666191)
chr2 (555-614)||(13125302-13125362)
chr2 (536-576)||(34248559-34248599)
[»] chr5 (31 HSPs)
chr5 (544-660)||(9502773-9502889)
chr5 (544-660)||(978077-978193)
chr5 (544-661)||(33587615-33587732)
chr5 (544-651)||(3472423-3472530)
chr5 (555-661)||(38916407-38916513)
chr5 (544-661)||(8086176-8086293)
chr5 (544-629)||(33387250-33387336)
chr5 (544-651)||(14634303-14634410)
chr5 (527-651)||(34111971-34112094)
chr5 (555-660)||(24992295-24992400)
chr5 (544-621)||(32017251-32017329)
chr5 (544-628)||(11251145-11251230)
chr5 (538-649)||(39776641-39776752)
chr5 (593-660)||(10696790-10696856)
chr5 (563-649)||(11785891-11785977)
chr5 (527-650)||(7224175-7224302)
chr5 (544-652)||(30355020-30355128)
chr5 (544-628)||(40156229-40156314)
chr5 (527-660)||(12007757-12007894)
chr5 (562-644)||(36240095-36240177)
chr5 (544-628)||(12456786-12456871)
chr5 (544-588)||(3422356-3422400)
chr5 (536-588)||(17476949-17477001)
chr5 (555-606)||(27579587-27579639)
chr5 (591-662)||(18598542-18598612)
chr5 (544-590)||(18998757-18998803)
chr5 (544-600)||(11761125-11761182)
chr5 (555-588)||(12359978-12360011)
chr5 (562-650)||(37495620-37495708)
chr5 (544-588)||(32400399-32400443)
chr5 (535-587)||(40267932-40267984)
[»] chr3 (35 HSPs)
chr3 (544-661)||(27334877-27334994)
chr3 (559-660)||(44561784-44561885)
chr3 (544-661)||(42490342-42490459)
chr3 (544-660)||(13499481-13499597)
chr3 (536-628)||(41252901-41252994)
chr3 (536-645)||(3430412-3430521)
chr3 (544-661)||(27010620-27010737)
chr3 (544-629)||(39866287-39866373)
chr3 (544-660)||(42761629-42761745)
chr3 (544-662)||(21005291-21005409)
chr3 (544-650)||(33415809-33415915)
chr3 (557-651)||(34912301-34912395)
chr3 (544-629)||(20765226-20765312)
chr3 (544-629)||(36227575-36227661)
chr3 (544-628)||(15332952-15333037)
chr3 (544-651)||(21797565-21797672)
chr3 (556-649)||(33803532-33803626)
chr3 (567-660)||(19823900-19823993)
chr3 (535-651)||(25527415-25527529)
chr3 (536-628)||(23940500-23940593)
chr3 (592-661)||(32220862-32220930)
chr3 (553-620)||(27813443-27813511)
chr3 (544-618)||(30213845-30213920)
chr3 (544-629)||(38137854-38137940)
chr3 (544-660)||(43181501-43181618)
chr3 (576-665)||(45613568-45613657)
chr3 (544-628)||(6910365-6910450)
chr3 (544-651)||(22786639-22786744)
chr3 (555-590)||(41751567-41751602)
chr3 (536-590)||(47164590-47164645)
chr3 (544-629)||(43467888-43467974)
chr3 (544-651)||(22782275-22782380)
chr3 (403-471)||(43467742-43467810)
chr3 (552-603)||(14412249-14412301)
chr3 (558-590)||(15568095-15568127)
[»] chr8 (30 HSPs)
chr8 (544-660)||(18044425-18044541)
chr8 (544-661)||(616782-616899)
chr8 (544-661)||(623175-623292)
chr8 (544-651)||(14237289-14237396)
chr8 (544-651)||(32998459-32998566)
chr8 (544-660)||(36642004-36642121)
chr8 (544-661)||(33700219-33700337)
chr8 (544-629)||(41263840-41263926)
chr8 (544-661)||(42587394-42587511)
chr8 (544-651)||(40494393-40494500)
chr8 (555-629)||(5878346-5878421)
chr8 (544-660)||(132017-132133)
chr8 (558-630)||(3370416-3370489)
chr8 (557-660)||(8394346-8394449)
chr8 (555-662)||(13216878-13216985)
chr8 (555-653)||(18090336-18090433)
chr8 (544-628)||(5173282-5173367)
chr8 (557-629)||(22489433-22489506)
chr8 (544-651)||(3100641-3100748)
chr8 (562-629)||(4270256-4270324)
chr8 (563-629)||(6414130-6414197)
chr8 (562-660)||(24524100-24524198)
chr8 (544-629)||(2766194-2766280)
chr8 (544-661)||(35403515-35403632)
chr8 (544-629)||(38957200-38957286)
chr8 (555-622)||(40204879-40204947)
chr8 (544-629)||(11637812-11637898)
chr8 (544-590)||(40716669-40716715)
chr8 (536-640)||(11162397-11162500)
chr8 (555-663)||(36167073-36167181)
[»] chr7 (47 HSPs)
chr7 (544-660)||(42890489-42890605)
chr7 (544-661)||(28061661-28061778)
chr7 (536-660)||(8683818-8683942)
chr7 (544-660)||(36623308-36623424)
chr7 (544-660)||(39130072-39130188)
chr7 (544-660)||(47156027-47156143)
chr7 (536-663)||(6174833-6174960)
chr7 (544-661)||(41897987-41898104)
chr7 (544-629)||(48602466-48602552)
chr7 (544-660)||(36341620-36341736)
chr7 (527-661)||(38851972-38852110)
chr7 (544-629)||(40090064-40090150)
chr7 (544-660)||(7457868-7457983)
chr7 (544-660)||(20885103-20885219)
chr7 (555-651)||(27045565-27045661)
chr7 (544-651)||(40256066-40256173)
chr7 (544-651)||(46479838-46479945)
chr7 (544-661)||(16778504-16778621)
chr7 (544-629)||(44732042-44732128)
chr7 (558-622)||(49110630-49110695)
chr7 (557-623)||(3785556-3785623)
chr7 (544-662)||(4131649-4131767)
chr7 (544-650)||(7438913-7439019)
chr7 (544-661)||(6766696-6766813)
chr7 (537-662)||(7169124-7169249)
chr7 (544-629)||(32431504-32431590)
chr7 (562-629)||(46322129-46322197)
chr7 (537-611)||(34750550-34750625)
chr7 (544-663)||(35117123-35117241)
chr7 (544-660)||(41134634-41134745)
chr7 (544-661)||(2198601-2198718)
chr7 (559-628)||(16870641-16870711)
chr7 (544-629)||(36585139-36585225)
chr7 (555-623)||(37467464-37467531)
chr7 (580-629)||(45331942-45331992)
chr7 (544-605)||(46103516-46103578)
chr7 (536-628)||(8656105-8656200)
chr7 (555-651)||(25566705-25566800)
chr7 (544-628)||(41088618-41088703)
chr7 (560-603)||(38767221-38767265)
chr7 (544-651)||(35570195-35570307)
chr7 (562-651)||(42662196-42662284)
chr7 (544-653)||(49101959-49102068)
chr7 (557-629)||(30342104-30342177)
chr7 (544-628)||(42877417-42877502)
chr7 (555-588)||(47525993-47526026)
chr7 (555-622)||(26161633-26161701)
[»] chr6 (36 HSPs)
chr6 (544-660)||(24624087-24624203)
chr6 (544-661)||(32414825-32414942)
chr6 (544-660)||(6563226-6563342)
chr6 (544-663)||(19088104-19088223)
chr6 (544-662)||(18668834-18668952)
chr6 (544-649)||(17213930-17214035)
chr6 (527-650)||(20226423-20226550)
chr6 (527-650)||(22120407-22120534)
chr6 (544-651)||(4440859-4440966)
chr6 (544-661)||(4147930-4148047)
chr6 (544-661)||(17257797-17257914)
chr6 (544-651)||(15383076-15383183)
chr6 (544-651)||(22054781-22054888)
chr6 (555-662)||(29790204-29790311)
chr6 (538-628)||(19240732-19240823)
chr6 (538-628)||(31869739-31869830)
chr6 (555-628)||(28477784-28477858)
chr6 (556-661)||(32671815-32671920)
chr6 (536-601)||(3623848-3623913)
chr6 (544-655)||(17155154-17155265)
chr6 (562-649)||(21540793-21540880)
chr6 (544-630)||(1040853-1040940)
chr6 (562-628)||(29693914-29693981)
chr6 (555-628)||(15337519-15337593)
chr6 (562-661)||(20437177-20437277)
chr6 (555-622)||(10298730-10298798)
chr6 (576-629)||(3989441-3989495)
chr6 (567-660)||(25475977-25476070)
chr6 (591-660)||(10520468-10520536)
chr6 (544-603)||(23158055-23158115)
chr6 (544-590)||(8101670-8101716)
chr6 (544-629)||(24955542-24955628)
chr6 (555-599)||(1260490-1260535)
chr6 (555-588)||(5495321-5495354)
chr6 (555-655)||(14214070-14214170)
chr6 (555-622)||(2360027-2360095)
[»] scaffold0022 (1 HSPs)
scaffold0022 (556-662)||(100805-100911)
[»] scaffold0003 (2 HSPs)
scaffold0003 (544-661)||(161983-162100)
scaffold0003 (413-469)||(161847-161903)
[»] scaffold0018 (1 HSPs)
scaffold0018 (544-651)||(67915-68022)
[»] scaffold0225 (1 HSPs)
scaffold0225 (544-628)||(8979-9064)
[»] scaffold0029 (1 HSPs)
scaffold0029 (544-628)||(138176-138261)
[»] scaffold0595 (1 HSPs)
scaffold0595 (555-617)||(3990-4053)
[»] scaffold0295 (2 HSPs)
scaffold0295 (544-661)||(13863-13980)
scaffold0295 (598-661)||(9371-9433)
[»] scaffold0056 (1 HSPs)
scaffold0056 (555-629)||(70991-71065)
[»] scaffold0262 (1 HSPs)
scaffold0262 (544-628)||(22811-22896)
[»] scaffold0099 (1 HSPs)
scaffold0099 (542-628)||(28796-28884)


Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 7 - 281
Target Start/End: Complemental strand, 23360824 - 23360558
Alignment:
Q  7 gaggagcagagagtaaagtgaatgagttactactacatgtaagtaaaatgtaattaatgagataataatgagaaagaaagcgatgtaccgaagcagcggg 106  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||  | |||       |||||||||||||||||||||||||||||||||||    
T  23360824 gaggaacagagagtaaagtgagtgagttactactacatgtaagtaaaatgttgt-aat-------taatgagaaagaaagcgatgtaccgaagcagcggg 23360733  T
Q  107 aaaacagagaaacgaatgagcgtttaagtgcagaaagagagaacagtggttggttcgatggttactttacttggtttgttagagttgaaaatgttgaatt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23360732 aaaacagagaaacgaatgagcgtttaagtgcagaaagagagaacaggggttggttcgatggttactttacttggtttgttagagttgaaaatgttgaatt 23360633  T
Q  207 agattttgaactgtatttataaggaaaaagaaccttttaaatatttgaatgttaagttgcacccttaatatgcta 281  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23360632 agattttcaactgtatttataaggaaaaagaaccttttaaatatttgaatgttaagttgcacccttaatatgcta 23360558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 535 - 668
Target Start/End: Complemental strand, 23360300 - 23360170
Alignment:
Q  535 aacaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaataggtcaaagtaagtcatatgaatagtgcacattgcaaaaaataca 634  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||| |     
T  23360300 aacaaatcaaacatcatacttgccaacatttgtattcatatattagttaaaaaataggtcaaagtaagtc--atgaatagtgcatattgc-aaaaatgcg 23360204  T
Q  635 acatgtattttgaaacgaatggagtataagttac 668  Q
    ||||||||||||||| ||||||||||||||||||    
T  23360203 acatgtattttgaaatgaatggagtataagttac 23360170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 527 - 660
Target Start/End: Original strand, 2760855 - 2760989
Alignment:
Q  527 atttgtcga-acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgc 624  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||||||||     
T  2760855 atttgtcgagacaaatcaaacatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattg- 2760953  T
Q  625 aaaaaatacaacatgtattttgaaacgaatggagta 660  Q
     ||||||   ||||||||||||||||| | ||||||    
T  2760954 taaaaattggacatgtattttgaaacggagggagta 2760989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 44232223 - 44232339
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||||||| ||  ||||||||    
T  44232223 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaatta-gacatgtat 44232321  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| ||||||||    
T  44232322 tttgaaacggatggagta 44232339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 556 - 661
Target Start/End: Complemental strand, 50205847 - 50205742
Alignment:
Q  556 gctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaat 654  Q
    ||||| ||||||||| |||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||| |   ||||||||||||||||||||    
T  50205847 gctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaact-tgacatgtattttgaaacgaat 50205749  T
Q  655 ggagtat 661  Q
    |||||||    
T  50205748 ggagtat 50205742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 653
Target Start/End: Complemental strand, 12625367 - 12625258
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||||||| |||||||||||| ||||| ||||||  |||||||||    
T  12625367 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgcatattgc-aaaaattgaacatgtat 12625269  T
Q  643 tttgaaacgaa 653  Q
    |||||||||||    
T  12625268 tttgaaacgaa 12625258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 35381040 - 35381157
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || ||||||||||||||| |||||||||||||||||  ||||||   ||||||||    
T  35381040 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattg-taaaaattggacatgtat 35381138  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  35381139 tttgaaacggagggagtat 35381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 38416796 - 38416913
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  38416796 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 38416894  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  38416895 tttgaaacggagggagtat 38416913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 43967839 - 43967722
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  | ||||||||||||||| ||||||  |||||||||    
T  43967839 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagttaatagtgcacattgc-aaaaattgaacatgtat 43967741  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  43967740 tttgaaacggaaggagtat 43967722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 544 - 662
Target Start/End: Original strand, 47386432 - 47386550
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||  ||||||||||||||| |||||| |   ||||||||    
T  47386432 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattccaaaaagt-ggacatgtat 47386530  T
Q  643 tttgaaacgaatggagtata 662  Q
    ||||||||| | ||||||||    
T  47386531 tttgaaacggagggagtata 47386550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 402 - 468
Target Start/End: Complemental strand, 23360435 - 23360369
Alignment:
Q  402 atactctatcagtttcaaaatacatgctacattcaactattttacatatgttaatgcacaattttga 468  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||    
T  23360435 atactctatccgtttcaaaatatatgttacattcaactattttacatatgttaatgcacaactttga 23360369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 29830459 - 29830343
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||  |||||||   ||||||||    
T  29830459 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacatt-aaaaaaattggacatgtat 29830361  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  29830360 tttgaaacggagggagta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 36523114 - 36523230
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| || ||||||||||||| |||||||||||||||| ||  ||||||||||||||| | ||||||||| ||||| |||||| | |||| |||    
T  36523114 aacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgcatattgc-aaaaatgcgacatatat 36523212  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| ||||||||    
T  36523213 tttgaaacggatggagta 36523230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 663
Target Start/End: Complemental strand, 7614731 - 7614612
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||| ||||||| |||||||| ||| || |  | ||||  |||| ||| ||||||||    
T  7614731 aacatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtgattaatatatattg-taaaattacgacatgtat 7614633  T
Q  643 tttgaaacgaatggagtataa 663  Q
    ||||||||| |||||||||||    
T  7614632 tttgaaacggatggagtataa 7614612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 25296726 - 25296833
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  |||||||||||||||||||||| ||  | ||||||    
T  25296726 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaatta-gatatgtat 25296824  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  25296825 tttgaaacg 25296833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 660
Target Start/End: Complemental strand, 39307799 - 39307696
Alignment:
Q  557 ctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatg 655  Q
    |||||||||||||| |||||||||||||||| |||  |||||||||||||| ||||||| | | ||||| |||||| | ||||||||||||||||| |||    
T  39307799 ctaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgtgaatagggtatattgc-aaaaatgcgacatgtattttgaaacggatg 39307701  T
Q  656 gagta 660  Q
    |||||    
T  39307700 gagta 39307696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 544 - 650
Target Start/End: Original strand, 12240324 - 12240430
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||||||| |||||||||||||||||  ||||||   ||||||||    
T  12240324 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattg-taaaaattggacatgtat 12240422  T
Q  643 tttgaaac 650  Q
    ||||||||    
T  12240423 tttgaaac 12240430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 54330836 - 54330922
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||| ||||||||||||||    
T  54330836 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgcaaaaa 54330922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 20875408 - 20875512
Alignment:
Q  559 aacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatgga 657  Q
    |||||||  ||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||||   |||| ||||||||||||||||||||  ||| |    
T  20875408 aacatttacatttatatattagttaaaaaatatggtcaaagtaaattatatgaatagtgcacatt-ttaaaattacaacatgtattttgaaacagatgaa 20875506  T
Q  658 gtataa 663  Q
    ||||||    
T  20875507 gtataa 20875512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 26170102 - 26169986
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||| |||  |||||||||||||||||| |||||   ||||||||    
T  26170102 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgca-aaaattggacatgtat 26170004  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  26170003 tttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 55209720 - 55209836
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || ||||||||||| |||  ||||||||||||||||  ||||||   ||||||||    
T  55209720 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattg-gaaaaattggacatgtat 55209818  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  55209819 tttgaaacggagggagta 55209836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 555 - 650
Target Start/End: Complemental strand, 3037085 - 3036990
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaac 650  Q
    |||||| ||||||||| |||||||||||||||| || |||||||||||||||| |||||||| |||||||  | || ||| ||||||||||||||||    
T  3037085 tgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagtacacattg-tataattacgacatgtattttgaaac 3036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 650
Target Start/End: Complemental strand, 38717002 - 38716897
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||||||| || ||||||||||||||| ||||||   ||||||||    
T  38717002 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtca-attaatagtgcacattgc-aaaaattggacatgtat 38716905  T
Q  643 tttgaaac 650  Q
    ||||||||    
T  38716904 tttgaaac 38716897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 55800939 - 55800864
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||||||||||    
T  55800939 tgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 55800864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 17610396 - 17610310
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| ||||| ||||||||| |||||||||||||||  ||||||||||| ||||||||||    
T  17610396 aacatcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaa 17610310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 535 - 629
Target Start/End: Complemental strand, 34316645 - 34316551
Alignment:
Q  535 aacaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaataggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||||| |||||| ||  |||||||||||||||| ||||||||||||| ||   | |||||||||||||||| ||||||||||| || |||||    
T  34316645 aacaaatcgaacatcttatatgctaacatttgtatttatatattagttaacaatatgatcaaagtaagtcatataaatagtgcacactgtaaaaa 34316551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 645
Target Start/End: Complemental strand, 38721453 - 38721352
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||||||||||||| ||||||| ||||||||||| | ||||| |||||||| |||||| | ||||||| ||||||| | ||||||||    
T  38721453 aacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattg-aaaaaatgcgacatgtat 38721355  T
Q  643 ttt 645  Q
    |||    
T  38721354 ttt 38721352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 45291948 - 45291862
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || | |||||||||||||  |||||||||||||||| |||||    
T  45291948 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattggaaaaa 45291862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 629
Target Start/End: Complemental strand, 31010351 - 31010244
Alignment:
Q  527 atttgtcga-acaaatcaaaca---tcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    ||||||||| ||||||||||||   || ||| |||||| |||| |||| ||| |||||||||||| || ||||||||||||||| |||||||||||||||    
T  31010351 atttgtcgagacaaatcaaacaatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacat 31010252  T
Q  622 tgcaaaaa 629  Q
    | ||||||    
T  31010251 tacaaaaa 31010244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 555 - 629
Target Start/End: Original strand, 27407776 - 27407851
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||||||||| |||||||||||||||| || ||||||||||||| || |||||||| |||| ||||||||    
T  27407776 tgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagttcacactgcaaaaa 27407851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 650
Target Start/End: Complemental strand, 35686489 - 35686383
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| || ||| ||||||||| ||| |||||||||||| || ||||||||||||| |  |||||||||||||||||| |||||   ||||||||    
T  35686489 aacatcttacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgca-aaaattggacatgtat 35686391  T
Q  643 tttgaaac 650  Q
    ||||||||    
T  35686390 tttgaaac 35686383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 26125824 - 26125738
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||  |||||| |||| |||| |||||    
T  26125824 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaataatgcatattgtaaaaa 26125738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 577 - 661
Target Start/End: Complemental strand, 5428661 - 5428577
Alignment:
Q  577 ttagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagtat 661  Q
    ||||||||||| || |||||| ||||||||| |||||||||||||||||  ||||| | ||||||||||||||||| || ||||||    
T  5428661 ttagttaaaaagtatggtcaacgtaagtcatgtgaatagtgcacattgc-caaaatgcgacatgtattttgaaacggatagagtat 5428577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 628
Target Start/End: Complemental strand, 10550550 - 10550455
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata---ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||||||||||| ||| ||||||||||| |||| ||||||||||||||||| |   ||| |||||||  ||| ||||||||||| |||| ||||    
T  10550550 acaaatcaaacatcttacatgctaacatttttatttatatattagttaaaaaaaatatggttaaagtaaaccatgtgaatagtgcatattgtaaaa 10550455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 651
Target Start/End: Complemental strand, 55191929 - 55191833
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacg 651  Q
    |||||| ||||||||| | | |||| ||||||| ||  |||||||||||||| ||||||||||||||||||| |||||  ||||| ||||||||||||    
T  55191929 tgctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgca-aaaattgaacatatattttgaaacg 55191833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 622
Target Start/End: Original strand, 2571039 - 2571107
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacatt 622  Q
    |||||||||||||||| |||||||||||||||||||  |||||| ||| |||| |||||| ||||||||    
T  2571039 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaataatgcacatt 2571107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 661
Target Start/End: Complemental strand, 29051782 - 29051683
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagta 660  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| || |||||| || | ||||  |||| | ||||||||||||| ||||| ||| ||||    
T  29051782 atttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattg-taaaattgcaacatgtattttaaaacggatgtagta 29051684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 652
Target Start/End: Complemental strand, 30446401 - 30446306
Alignment:
Q  556 gctaacatttgtattcatatattagttaaaaaataggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacga 652  Q
    ||||||||||||||| |||||||||| |||||   |||||||||||||||| |||||| |||| ||| | ||| || | ||||| ||||||||||||    
T  30446401 gctaacatttgtatttatatattagtcaaaaatagggtcaaagtaagtcatgtgaataatgcagattac-aaacatgcgacatgcattttgaaacga 30446306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 650
Target Start/End: Original strand, 19433504 - 19433614
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-----ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacat 638  Q
    |||||| ||| |||||| ||||||||| ||| | |||||||||| ||     |||||||||||||||  |||| |||||||||||| ||||||  |||||    
T  19433504 aacatcttacatgctaatatttgtatttatacaatagttaaaaagtatatatggtcaaagtaagtcaagtgaaaagtgcacattgc-aaaaattgaacat 19433602  T
Q  639 gtattttgaaac 650  Q
    ||||||||||||    
T  19433603 gtattttgaaac 19433614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 19903807 - 19903874
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||| | || ||||| ||||||||    
T  19903807 tgctaacatttgtatttatatattagttaaaatatatggtcaaagtaaattatgtgaatcgtgcacat 19903874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 649
Target Start/End: Complemental strand, 25101825 - 25101731
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaa 649  Q
    |||||| ||||| ||| |||| ||||||||||| || ||||||| ||| |||||| |||| | ||||||||||||| | |||||||||||||||||    
T  25101825 tgctaatatttgaatttatatgttagttaaaaagtatggtcaaaataaatcatataaataatacacattgcaaaaa-tgcaacatgtattttgaaa 25101731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 17446779 - 17446865
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| || ||| ||||||||| ||| |||||||||||  || ||||||||| ||||| ||||||||||||||||| |||||    
T  17446779 aacatcttacatgttaatatttgtatttatacattagttaaaatgtatggtcaaagttagtcaaatgaatagtgcacattgtaaaaa 17446865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 616
Target Start/End: Original strand, 29586005 - 29586063
Alignment:
Q  558 taacatttgtattcatatattagttaaaaaataggtcaaagtaagtcatatgaatagtg 616  Q
    ||||||||||||| | |||||| |||||||||| |||||||||||| || |||||||||    
T  29586005 taacatttgtatttacatattaattaaaaaatatgtcaaagtaagttatgtgaatagtg 29586063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 644
Target Start/End: Original strand, 56297859 - 56297948
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattt 644  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||  |||| || |||||| || ||||||  |||||||| ||||||||||    
T  56297859 tgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattg-taaaaatacgacatgtattt 56297948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 660
Target Start/End: Original strand, 9029574 - 9029714
Alignment:
Q  527 atttgtcga-acaaatcaaaca---tcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    ||||||||| ||||||||||||   || ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||||| |  | |||||| || ||    
T  9029574 atttgtcgagacaaatcaaacaatatcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtaaatagtacagat 9029673  T
Q  622 tgcaaaa--aatacaacatgtattttgaaacgaatggagta 660  Q
    |||||||  |||   ||||||||||| ||||| ||||||||    
T  9029674 tgcaaaattaattggacatgtattttaaaacggatggagta 9029714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 25918319 - 25918233
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| |||| |||| ||| ||| |||||||| |||| ||||| ||| |||  ||||||||||||||||||||||    
T  25918319 aacatcttacatgctaatatttatatttatacattggttaaaaagtagggtcaaaataattcaagtgaatagtgcacattgcaaaaa 25918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 34652211 - 34652300
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacg 651  Q
    ||||||||| |||| |||||||||||||| |||| ||||||||| | | |||||| |||||| | ||||||   |||||||||||||||||    
T  34652211 atttgtatttatatgttagttaaaaaatatggtcgaagtaagtcgtgtaaatagtacacattac-aaaaatgtgacatgtattttgaaacg 34652300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 649
Target Start/End: Complemental strand, 27755839 - 27755730
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatata----ttagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacat 638  Q
    |||||| ||| |||||||||||||||| |||||    ||||||||||| || ||||||| ||||| ||||||| | || ||||| | |||||| | ||||    
T  27755839 aacatcttacgtgctaacatttgtatttatatatatgttagttaaaaagtatggtcaaaataagttatatgaacaatgtacattac-aaaaatgcgacat 27755741  T
Q  639 gtattttgaaa 649  Q
    |||||||||||    
T  27755740 gtattttgaaa 27755730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 544 - 603
Target Start/End: Original strand, 14144603 - 14144663
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaat-aggtcaaagtaagt 603  Q
    |||||| ||| | |||| ||||||||| ||||||||||||||||||  |||||||||||||    
T  14144603 aacatcttacatactaatatttgtatttatatattagttaaaaaatgtggtcaaagtaagt 14144663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 573 - 660
Target Start/End: Complemental strand, 19897726 - 19897639
Alignment:
Q  573 tatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagta 660  Q
    |||||||||| ||||||  ||||||||||||| || ||||||||| ||||||  |||| | | ||| ||||||||||||||| ||||||    
T  19897726 tatattagttcaaaaatgtggtcaaagtaagttatgtgaatagtgtacattg-taaaattgcgacaagtattttgaaacgaagggagta 19897639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 3e-31; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 527 - 662
Target Start/End: Complemental strand, 6766506 - 6766370
Alignment:
Q  527 atttgtcga-acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgc 624  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  6766506 atttgtcgagacaaatcaaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc 6766407  T
Q  625 aaaaaatacaacatgtattttgaaacgaatggagtata 662  Q
     ||||||  |||||||||||||||||| | ||||||||    
T  6766406 -aaaaattgaacatgtattttgaaacggagggagtata 6766370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 544 - 663
Target Start/End: Original strand, 36757632 - 36757751
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  36757632 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 36757730  T
Q  643 tttgaaacgaatggagtataa 663  Q
    ||||||| | |||||||||||    
T  36757731 tttgaaatggatggagtataa 36757751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 527 - 661
Target Start/End: Original strand, 42735290 - 42735431
Alignment:
Q  527 atttgtcga-acaaatcaaacatcat---acttgctaacatttgtattcatatattagttaaaaaatag----gtcaaagtaagtcatatgaatagtgca 618  Q
    ||||||||| ||||||||||||||||   || |||||| ||||||||| ||||||||||||||||| ||    ||||||||||||||  |||||||||||    
T  42735290 atttgtcgagacaaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgca 42735389  T
Q  619 cattgcaaaaaatacaacatgtattttgaaacgaatggagtat 661  Q
    |||||| || |||  |||||||||||||||||| |||||||||    
T  42735390 cattgc-aataattgaacatgtattttgaaacggatggagtat 42735431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 555 - 658
Target Start/End: Original strand, 28030838 - 28030941
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    |||||||||||||||| |||| ||||||||||| || ||||||| |||||||| | |||| |||||||||| |||||| ||||||||||||||||||| |    
T  28030838 tgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgcacattgc-aaaaatgcaacatgtattttgaaacgta 28030936  T
Q  654 tggag 658  Q
    |||||    
T  28030937 tggag 28030941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 544 - 663
Target Start/End: Complemental strand, 30003649 - 30003530
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||| | ||||||   ||||||||    
T  30003649 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattac-aaaaattggacatgtat 30003551  T
Q  643 tttgaaacgaatggagtataa 663  Q
    ||||||||| |||||||||||    
T  30003550 tttgaaacggatggagtataa 30003530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 544 - 662
Target Start/End: Original strand, 11641213 - 11641331
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  11641213 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 11641311  T
Q  643 tttgaaacgaatggagtata 662  Q
    ||||||| | | ||||||||    
T  11641312 tttgaaatggagggagtata 11641331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 6402556 - 6402673
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || ||||||| |||||||  ||||||||||||||||| ||||||   ||||||||    
T  6402556 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 6402654  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  6402655 tttgaaacggagggagtat 6402673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 9342791 - 9342907
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| | |||||||||||||  ||||||  |||||||||||||| ||  |||||| |    
T  9342791 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaataacgcacattgcaaaaatta-gacatgttt 9342889  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| ||||||||    
T  9342890 tttgaaacggatggagta 9342907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 16120586 - 16120702
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  |||||| |||||||||| ||||||   ||||||||    
T  16120586 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgc-aaaaattggacatgtat 16120684  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  16120685 tttgaaacggagggagta 16120702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 660
Target Start/End: Complemental strand, 36399202 - 36399098
Alignment:
Q  556 gctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaat 654  Q
    ||||| ||||||||| ||| |||||||||||| || ||||||||||||| |  |||||||||||||||||| |||||   ||||||||||||||||| ||    
T  36399202 gctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgca-aaaattggacatgtattttgaaacggat 36399104  T
Q  655 ggagta 660  Q
    ||||||    
T  36399103 ggagta 36399098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 535 - 663
Target Start/End: Complemental strand, 27984680 - 27984553
Alignment:
Q  535 aacaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaataggtcaaagtaagtcatatgaatagtgcacattgcaaaaaataca 634  Q
    ||||||||||||||| |||  |||||||||||||||| |||||||||||||||   ||||||||||||  || |||||||||||  |||  |||| |       
T  27984680 aacaaatcaaacatcttacaagctaacatttgtattcgtatattagttaaaaatatggtcaaagtaagcaatgtgaatagtgcatgttg-taaaattgtg 27984582  T
Q  635 acatgtattttgaaacgaatggagtataa 663  Q
    ||||||||||| ||||| |||||||||||    
T  27984581 acatgtattttaaaacggatggagtataa 27984553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 663
Target Start/End: Complemental strand, 24321398 - 24321256
Alignment:
Q  527 atttgtcga-acaaatcaaaca---tcatacttgctaacatttgtattcatatattagttaaaaaata---ggtcaaagtaagtcatatgaatagtgcac 619  Q
    ||||||||| ||||||||||||   || ||| |||||| ||||||||| ||| |||||||||||| ||   ||||||||||| |||  ||||||||||||    
T  24321398 atttgtcgagacaaatcaaacaatatcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcac 24321299  T
Q  620 attgcaaaaaatacaacatgtattttgaaacgaatggagtataa 663  Q
    |||||| ||||| | ||||||||||| ||||| | |||||||||    
T  24321298 attgca-aaaattcgacatgtattttaaaacggagggagtataa 24321256  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 662
Target Start/End: Original strand, 40771918 - 40772036
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||| |||  ||||||||||||||||  ||||||   ||||||||    
T  40771918 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattg-taaaaattggacatgtat 40772016  T
Q  643 tttgaaacgaatggagtata 662  Q
    ||||||||| | ||||||||    
T  40772017 tttgaaacggagggagtata 40772036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 645
Target Start/End: Original strand, 44644512 - 44644602
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtatttt 645  Q
    |||||||||||||||| ||||||| ||||||||||| | |||||||||||||| |||||| | ||||||| ||||||| | |||||||||||    
T  44644512 tgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattg-aaaaaatgcgacatgtatttt 44644602  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 17306070 - 17305984
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||||||| ||||||| ||  ||||||||||||||  ||||||||||||||||||||||    
T  17306070 aacatcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 17305984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 556 - 661
Target Start/End: Complemental strand, 30701822 - 30701717
Alignment:
Q  556 gctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaat 654  Q
    ||||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||| | ||||||   ||||||||||||||||| |     
T  30701822 gctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattac-aaaaattggacatgtattttgaaacggag 30701724  T
Q  655 ggagtat 661  Q
    |||||||    
T  30701723 ggagtat 30701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 645
Target Start/End: Original strand, 44647859 - 44647960
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||||||||||||| ||||||| ||||||||||| | ||||| |||||||| |||||| | ||||||| ||||||| | ||||||||    
T  44647859 aacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattg-aaaaaatgcgacatgtat 44647957  T
Q  643 ttt 645  Q
    |||    
T  44647958 ttt 44647960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 556 - 661
Target Start/End: Complemental strand, 52024130 - 52024025
Alignment:
Q  556 gctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaat 654  Q
    ||||| |||| |||| ||| |||||||||||| || ||||||||||||| |  |||||||||||||||||| |||||  |||||||||||||||||| |     
T  52024130 gctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgca-aaaattgaacatgtattttgaaacggag 52024032  T
Q  655 ggagtat 661  Q
    |||||||    
T  52024031 ggagtat 52024025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 538 - 622
Target Start/End: Original strand, 30385285 - 30385370
Alignment:
Q  538 aaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacatt 622  Q
    |||| ||||||| ||| | |||||||||||||| ||||||||||||||||||| |||||||||||   || |||||||||||||||    
T  30385285 aaattaaacatcttacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacatt 30385370  T

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Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 562 - 629
Target Start/End: Complemental strand, 26910174 - 26910106
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||||||||||    
T  26910174 atttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 26910106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 649
Target Start/End: Original strand, 38153423 - 38153528
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| || ||||||||||||| |||| ||||||||||| || ||| | |||||||||| |||||||||||||||   |||||| | ||||||||    
T  38153423 aacatcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtgcacatt-ataaaaatgcgacatgtat 38153521  T
Q  643 tttgaaa 649  Q
    |||||||    
T  38153522 tttgaaa 38153528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 40977634 - 40977720
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||| |||||  |||||||| |||||||||||||    
T  40977634 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagttagtcaagtgaatagtacacattgcaaaaa 40977720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 42788688 - 42788774
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| ||| || ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||| ||||||    
T  42788688 aacatcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaa 42788774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 558 - 650
Target Start/End: Original strand, 3485367 - 3485459
Alignment:
Q  558 taacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaac 650  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||| ||  |||||||||| ||||  |||| ||| ||||||||||| ||||    
T  3485367 taacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattg-taaaattacgacatgtattttaaaac 3485459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 629
Target Start/End: Complemental strand, 4302252 - 4302148
Alignment:
Q  527 atttgtcgaa-caaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgc 624  Q
    |||||||||| ||||||||||||| ||| |||||| |||| |||| ||| ||||||||||||| |   |||||||||||||  | ||||||| |||||||    
T  4302252 atttgtcgaaacaaatcaaacatcttacatgctaatatttatatttatacattagttaaaaaacattatcaaagtaagtcaagtaaatagtgtacattgc 4302153  T
Q  625 aaaaa 629  Q
    |||||    
T  4302152 aaaaa 4302148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 25695624 - 25695557
Alignment:
Q  402 atactctatcagtttcaaaatacatgctacattcaactattttacatatgttaatgcacaattttgac 469  Q
    |||||||||| |||| |||||||||| || | ||||| |||||||| |||||||||||||| ||||||    
T  25695624 atactctatctgttttaaaatacatgttatagtcaaccattttacacatgttaatgcacaactttgac 25695557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 649
Target Start/End: Original strand, 40800533 - 40800638
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagtt-aaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgta 641  Q
    |||||| ||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| || ||| || |||||||||  |||| ||| |||| ||    
T  40800533 aacatcttacatgctaacatttgtatt-atatattagttaaaaaaatatggtcaaagtaagttatgtgattaatgcacattg-taaaattacgacatata 40800630  T
Q  642 ttttgaaa 649  Q
    ||||||||    
T  40800631 ttttgaaa 40800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 590
Target Start/End: Original strand, 22575733 - 22575779
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata 590  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||    
T  22575733 aacatcttacatgctaacatttgtatttatatattagttaaaaaata 22575779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 15382572 - 15382679
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaa-taggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| | |||| ||||||||| |||||||| |||||||| | ||||| ||||||| || ||||||||| |||||| ||||  | | ||||||||    
T  15382572 aacatcttacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaat-tgcgacatgtat 15382670  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  15382671 tttgaaacg 15382679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 564 - 621
Target Start/End: Complemental strand, 16689920 - 16689862
Alignment:
Q  564 ttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacat 621  Q
    ||||||| |||||||||||| |||||| | ||||||||||| || ||||||||||||||    
T  16689920 ttgtatttatatattagttagaaaatatgatcaaagtaagttatgtgaatagtgcacat 16689862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 27292756 - 27292670
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||  ||||||||||| ||  |||||||||| |||  ||||||||||| ||||||||||    
T  27292756 aacatcttacatgctaatatttgtatttatactttagttaaaaagtatagtcaaagtaaatcaagtgaatagtgcagattgcaaaaa 27292670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 25695505 - 25695427
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata----ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    ||||||||||| |||| ||||||||||||||||| |    |||||| | |||| |||||| || |||||||||||||||    
T  25695505 tgctaacatttatatttatatattagttaaaaaaaaatatggtcaacgcaagtgatatgattaatgcacattgcaaaaa 25695427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 558 - 590
Target Start/End: Complemental strand, 34635009 - 34634977
Alignment:
Q  558 taacatttgtattcatatattagttaaaaaata 590  Q
    ||||||||||||| |||||||||||||||||||    
T  34635009 taacatttgtatttatatattagttaaaaaata 34634977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 8e-29; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 7799963 - 7799847
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||| | ||||||||    
T  7799963 aacatcttacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgca-aaaatgcgacatgtat 7799865  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  7799864 tttgaaacgtagggagta 7799847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 527 - 661
Target Start/End: Original strand, 2183085 - 2183220
Alignment:
Q  527 atttgtcga-acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgc 624  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||||| |||||||||||| || |||||||||||||||  |||||||||||||||||    
T  2183085 atttgtcgagacaaatcaaacatcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc 2183184  T
Q  625 aaaaaatacaacatgtattttgaaacgaatggagtat 661  Q
     ||||||   ||||||||||||||||| | |||||||    
T  2183185 -aaaaattggacatgtattttgaaacggagggagtat 2183220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 527 - 651
Target Start/End: Complemental strand, 6223203 - 6223075
Alignment:
Q  527 atttgtcga-acaaatcaaacatcat---acttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    ||||||||| ||||||||||||||||   || |||||| ||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  6223203 atttgtcgagacaaatcaaacatcatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacat 6223104  T
Q  622 tgcaaaaaatacaacatgtattttgaaacg 651  Q
    |||| |||||  ||||||||||||||||||    
T  6223103 tgca-aaaattgaacatgtattttgaaacg 6223075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 7608165 - 7608049
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  7608165 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 7608067  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| ||||||||    
T  7608066 tttgaaacggatggagta 7608049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 19141212 - 19141329
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  19141212 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 19141310  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  19141311 tttgaaacggagggagtat 19141329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 8042168 - 8042284
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  8042168 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 8042266  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  8042267 tttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 667
Target Start/End: Original strand, 24093682 - 24093806
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaa-ta-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgta 641  Q
    |||||| ||| |||||||||||||||| |||| |||||||||||| || ||||||||||| ||||| |||||| |||||| ||||||||||| |||||||    
T  24093682 aacatcttacatgctaacatttgtatt-atatgttagttaaaaaagtatggtcaaagtaaatcatacgaatagcgcacatcgcaaaaaatacgacatgta 24093780  T
Q  642 ttttgaaacgaatggagtataagtta 667  Q
    |||||||| | ||| ||||| |||||    
T  24093781 ttttgaaatggatgaagtattagtta 24093806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 5405112 - 5405005
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  5405112 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 5405014  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  5405013 tttgaaacg 5405005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 538 - 661
Target Start/End: Complemental strand, 42133874 - 42133751
Alignment:
Q  538 aaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaac 636  Q
    |||||||||||| | | |||||||||||||||| ||||||||||||||||||| | |||||||||   ||||||||||||||||||   |||| ||| ||    
T  42133874 aaatcaaacatctttcatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgcacatt-ttaaaattacgac 42133776  T
Q  637 atgtattttgaaacgaatggagtat 661  Q
    ||||||||||||| ||| |||||||    
T  42133775 atgtattttgaaatgaagggagtat 42133751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 11841739 - 11841825
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  11841739 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaa 11841825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 39358262 - 39358145
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  39358262 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 39358164  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  39358163 tttgaaacggagggagtat 39358145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 555 - 651
Target Start/End: Complemental strand, 19262785 - 19262689
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacg 651  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||| | || |||||||||||||| |||||||   |||||||||||||||||    
T  19262785 tgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgcacattg-aaaaaattggacatgtattttgaaacg 19262689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 555 - 650
Target Start/End: Complemental strand, 11931796 - 11931701
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaac 650  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||| ||||  |||| | | ||||||||||||||||    
T  11931796 tgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattg-taaaattgcgacatgtattttgaaac 11931701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 44365273 - 44365166
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||| ||||| ||||||   ||||||||    
T  44365273 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgc-aaaaattggacatgtat 44365175  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  44365174 tttgaaacg 44365166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 661
Target Start/End: Original strand, 9006941 - 9007047
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||||||  | ||||||| |||||||||  |||| | | ||||||||||||||| | |    
T  9006941 tgctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattg-taaaattgcgacatgtattttgaaatgga 9007039  T
Q  654 tggagtat 661  Q
    ||||||||    
T  9007040 tggagtat 9007047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 555 - 627
Target Start/End: Original strand, 22839084 - 22839157
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaa 627  Q
    |||||||||||  ||| ||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  22839084 tgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacattgcaaa 22839157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 578 - 651
Target Start/End: Complemental strand, 13598523 - 13598451
Alignment:
Q  578 tagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacg 651  Q
    |||||||||| || |||||||||||||||||||||||||||||||||  |||||| |||||| |||||| |||||    
T  13598523 tagttaaaaagtatggtcaaagtaagtcatatgaatagtgcacattg--aaaaatgcaacatatattttaaaacg 13598451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 555 - 649
Target Start/End: Original strand, 43444697 - 43444791
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaa 649  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| || | || |||||| |||||||||  |||| | | |||||||||||||||    
T  43444697 tgctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattg-taaaattgcgacatgtattttgaaa 43444791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 36072290 - 36072204
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| |||| |||| ||| ||||||||||||||| | ||||||||||||| |||||||||||| |||| |||||    
T  36072290 aacatcttacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaa 36072204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 613
Target Start/End: Complemental strand, 24252086 - 24252006
Alignment:
Q  536 acaaatcaaacatcat--acttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaata 613  Q
    |||||||||||| |||  || |||||||||||||||| ||||||||||||||||||| ||||||| ||||| || ||||||    
T  24252086 acaaatcaaacaacatttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaata 24252006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 613
Target Start/End: Complemental strand, 16865159 - 16865100
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaata 613  Q
    |||||||||||||||| |||| ||||||||||| ||  ||||||||||||||||||||||    
T  16865159 tgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaata 16865100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 618
Target Start/End: Complemental strand, 38292068 - 38291993
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgca 618  Q
    |||||| ||| || ||||||||||||| ||||| ||||||||||||| ||||||||||||| || |||||| ||||    
T  38292068 aacatcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaaagtaagttatctgaataatgca 38291993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 603
Target Start/End: Original strand, 9172292 - 9172352
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagt 603  Q
    |||||| ||| ||||||| |||||||| ||| ||||||||||||||| |||||||||||||    
T  9172292 aacatcttacatgctaacttttgtatttatacattagttaaaaaatatggtcaaagtaagt 9172352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 536 - 592
Target Start/End: Complemental strand, 24607891 - 24607836
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaatagg 592  Q
    |||||||||||| ||| ||| ||||||||| |||| |||||||||||||||||||||    
T  24607891 acaaatcaaacaacat-cttactaacatttatatttatatattagttaaaaaatagg 24607836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 620
Target Start/End: Original strand, 31610812 - 31610876
Alignment:
Q  557 ctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcaca 620  Q
    |||||||||||||| ||||||||||||||||| | ||| ||| ||||| || |||||||||||||    
T  31610812 ctaacatttgtatttatatattagttaaaaaaaatggtaaaaataagttatgtgaatagtgcaca 31610876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 629
Target Start/End: Complemental strand, 33607474 - 33607406
Alignment:
Q  562 atttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    ||||||||| ||| |||||||||||| ||   ||||||||||||| ||||||||||||||||| |||||    
T  33607474 atttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaa 33607406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Complemental strand, 38839178 - 38839143
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata 590  Q
    |||||||||||||||| |||||||||||||||||||    
T  38839178 tgctaacatttgtatttatatattagttaaaaaata 38839143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 624
Target Start/End: Complemental strand, 44644968 - 44644905
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgc 624  Q
    |||| |||| |||||||||||||||| || |||||||||||| ||  |||||||||||||||||    
T  44644968 atttatatttatatattagttaaaaagtatggtcaaagtaagacaattgaatagtgcacattgc 44644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 628
Target Start/End: Original strand, 36177715 - 36177809
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagtt-aaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||||||||||| ||  || ||| |||| |||| ||||||||||| |||||||| ||||||| ||| |||| |||||| ||| ||||||||||    
T  36177715 acaaatcaaacatcttagatgttaatatttttatttatatattagttaaaaaaatatggtcaaaataaatcatgtgaataatgcgcattgcaaaa 36177809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 621
Target Start/End: Original strand, 13117483 - 13117548
Alignment:
Q  557 ctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    |||| |||| |||| |||||| |||||||||||| ||||||||||||| |||| || |||||||||    
T  13117483 ctaatatttatatttatatatcagttaaaaaatatggtcaaagtaagttatataaacagtgcacat 13117548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 616
Target Start/End: Original strand, 31904018 - 31904099
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtg 616  Q
    |||||||| ||||| ||| || ||| |||| |||| ||||||||||||||||||| ||||| ||||||  || |||||||||    
T  31904018 acaaatcacacatcttacgtgataatatttatatttatatattagttaaaaaatatggtcagagtaagctatgtgaatagtg 31904099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 618
Target Start/End: Original strand, 44563154 - 44563219
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaa-tagg-tcaaagtaagtcatatgaatagtgca 618  Q
    ||||||||| |||||| |||||||| |||||||| || | ||||||||||| ||||||||||||||    
T  44563154 tgctaacatatgtatttatatattaattaaaaaaatatgatcaaagtaagttatatgaatagtgca 44563219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 622
Target Start/End: Complemental strand, 7666191 - 7666127
Alignment:
Q  559 aacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacatt 622  Q
    |||| ||||||| ||||||||| ||||| ||| ||||||||||| | ||||||||| ||||||||    
T  7666191 aacaattgtatttatatattagataaaatatatggtcaaagtaaattatatgaataatgcacatt 7666127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 614
Target Start/End: Original strand, 13125302 - 13125362
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatag 614  Q
    |||||| ||||||||| ||| ||||||||||||||| ||| |||||||||||  |||||||    
T  13125302 tgctaatatttgtatttatacattagttaaaaaatatggtgaaagtaagtcaagtgaatag 13125362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 536 - 576
Target Start/End: Complemental strand, 34248599 - 34248559
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatata 576  Q
    |||||||||||||| ||| |||||||||||||||| |||||    
T  34248599 acaaatcaaacatcttacatgctaacatttgtatttatata 34248559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 9502773 - 9502889
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  9502773 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaatta-aacatgtat 9502871  T
Q  643 tttgaaacgaatggagta 660  Q
    ||| ||||| | ||||||    
T  9502872 tttaaaacggagggagta 9502889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 978193 - 978077
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  978193 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 978095  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  978094 tttgaaacggagggagta 978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 33587615 - 33587732
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| || ||| ||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||   ||||||||    
T  33587615 aacatcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgc-aaaaattggacatgtat 33587713  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||  |||||||||    
T  33587714 tttgaaacagatggagtat 33587732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 3472423 - 3472530
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||  ||||||||||||||| |||||||||||||||  | ||||||||||||||| ||||||  |||||||||    
T  3472423 aacatcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagtcaagtaaatagtgcacattgc-aaaaattgaacatgtat 3472521  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  3472522 tttgaaacg 3472530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 555 - 661
Target Start/End: Original strand, 38916407 - 38916513
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    |||||||||||||||| |||| ||||||||||| || |||||||| ||||||| ||||||||||| | ||| |||||| | ||||||||||||||||| |    
T  38916407 tgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatagtgcatactgc-aaaaatgcgacatgtattttgaaacgga 38916505  T
Q  654 tggagtat 661  Q
     |||||||    
T  38916506 gggagtat 38916513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 8086176 - 8086293
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| || ||| ||||||||| |||||||||||||||| ||  ||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  8086176 aacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 8086274  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  8086275 tttgaaacggagggagtat 8086293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 33387336 - 33387250
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| ||  ||||||||||||||  ||||||||||||||||||||||    
T  33387336 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 33387250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 14634303 - 14634410
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| ||  ||||||||||||||  ||| ||||||||||||| ||||||   ||||||||    
T  14634303 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgc-aaaaattggacatgtat 14634401  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  14634402 tttgaaacg 14634410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 651
Target Start/End: Complemental strand, 34112094 - 34111971
Alignment:
Q  527 atttgtcga-acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgc 624  Q
    ||||||||| ||||||||||  || ||| || ||| ||||||||| ||| |||||| ||||||||  ||||||||||||||  |||||||||||||||||    
T  34112094 atttgtcgagacaaatcaaa--tcttacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacattgc 34111997  T
Q  625 aaaaaatacaacatgtattttgaaacg 651  Q
    ||||| ||  |||||||||||||||||    
T  34111996 aaaaacta-gacatgtattttgaaacg 34111971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 660
Target Start/End: Original strand, 24992295 - 24992400
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    |||||| ||||||||| ||| ||||||||||||||| ||||||||||||  || ||||||||||||||||  |||| ||  ||||||||||||||||| |    
T  24992295 tgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcacattg-taaaactatgacatgtattttgaaacgga 24992393  T
Q  654 tggagta 660  Q
     ||||||    
T  24992394 gggagta 24992400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 621
Target Start/End: Complemental strand, 32017329 - 32017251
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||| | ||||||||||| || |||||| |||||||    
T  32017329 aacatcttacatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgtgaatattgcacat 32017251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 628
Target Start/End: Complemental strand, 11251230 - 11251145
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||| |||||||  |||||||||||||||||||||    
T  11251230 aacatcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 11251145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 538 - 649
Target Start/End: Complemental strand, 39776752 - 39776641
Alignment:
Q  538 aaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaac 636  Q
    ||||| |||||  ||| |||||| ||||||||| |||| ||||||||||| || ||||||| ||||| || ||||||||| |||||||| ||||||| |     
T  39776752 aaatcgaacattttacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaatagtgtacattgca-aaaatacgaa 39776654  T
Q  637 atgtattttgaaa 649  Q
    |||||||||||||    
T  39776653 atgtattttgaaa 39776641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 10696856 - 10696790
Alignment:
Q  593 tcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagta 660  Q
    |||||||||||||||||||||||||||||||||||| |  | || |||||||||||||| ||||||||    
T  10696856 tcaaagtaagtcatatgaatagtgcacattgcaaaata-gcgacgtgtattttgaaacggatggagta 10696790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 563 - 649
Target Start/End: Original strand, 11785891 - 11785977
Alignment:
Q  563 tttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaa 649  Q
    |||||||| ||| |||||||||||| || | |||||||||||||  |||||||| ||||||||||||| || ||||||||||||||||    
T  11785891 tttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtacacattgcaaaaatta-aacatgtattttgaaa 11785977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 527 - 650
Target Start/End: Complemental strand, 7224302 - 7224175
Alignment:
Q  527 atttgtcga-acaaatcaaacatcat---acttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    ||||||||| |||||||||||| |||   || |||||| ||||||||| ||| |||||||| ||| || |||||||||||||||  | |||||| |||||    
T  7224302 atttgtcgagacaaatcaaacaacattttacatgctaatatttgtatttataaattagttagaaagtatggtcaaagtaagtcaattaaatagtacacat 7224203  T
Q  622 tgcaaaaaatacaacatgtattttgaaac 650  Q
    ||||||||||  |||||||||||| ||||    
T  7224202 tgcaaaaaat-gaacatgtattttaaaac 7224175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 652
Target Start/End: Original strand, 30355020 - 30355128
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||  || ||| ||||||| |||  ||||||||||| ||||| ||||||   ||||||||    
T  30355020 aacatcttacatgctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagtgaatagtgcatattgc-aaaaattggacatgtat 30355118  T
Q  643 tttgaaacga 652  Q
    ||||||||||    
T  30355119 tttgaaacga 30355128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 628
Target Start/End: Complemental strand, 40156314 - 40156229
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| |||||| ||||||||| ||| |||| ||||||| || ||| |||||||||||  |||||||||||||||||||||    
T  40156314 aacatcttacatgctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgcaaaa 40156229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 660
Target Start/End: Original strand, 12007757 - 12007894
Alignment:
Q  527 atttgtcgaa-caaatcaaacatcat---acttgctaacatttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacat 621  Q
    |||||||||| ||||||||||| |||   || ||||| |||||||||| |||||||| ||||||| |||| ||||| |||||||| | |||||||||||     
T  12007757 atttgtcgaaacaaatcaaacaacattttacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtgcacaa 12007856  T
Q  622 tgcaaaaaatacaacatgtattttgaaacgaatggagta 660  Q
    |  ||||| | | ||||||||||||||||| | ||||||    
T  12007857 tataaaaa-tgcgacatgtattttgaaacggagggagta 12007894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 644
Target Start/End: Original strand, 36240095 - 36240177
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattt 644  Q
    ||||||||| ||||||||||| ||||||| |||||||| |||| ||| |||||||||||||||   ||| ||||||||||||||    
T  36240095 atttgtatttatatattagtttaaaaatatggtcaaagaaagttataagaatagtgcacattg-tcaaattacaacatgtattt 36240177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 628
Target Start/End: Original strand, 12456786 - 12456871
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| | ||||||||||||||  |||||||||||||||||| | | ||||||||| || | |||||||||||||| ||||    
T  12456786 aacatcttacatactaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgtaaatagtgcacattgtaaaa 12456871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 588
Target Start/End: Original strand, 3422356 - 3422400
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaa 588  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||    
T  3422356 aacatcttacatgctaacatttgtatttatatattagttaaaaaa 3422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 536 - 588
Target Start/End: Complemental strand, 17477001 - 17476949
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaa 588  Q
    |||||||||||||| ||  | |||||||||||||| |||||||||||||||||    
T  17477001 acaaatcaaacatcttatatactaacatttgtatttatatattagttaaaaaa 17476949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 606
Target Start/End: Original strand, 27579587 - 27579639
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcat 606  Q
    |||||||||||||||| |||||||||||||||||||  || ||||||||||||    
T  27579587 tgctaacatttgtatttatatattagttaaaaaatatagttaaagtaagtcat 27579639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 662
Target Start/End: Complemental strand, 18598612 - 18598542
Alignment:
Q  591 ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagtata 662  Q
    ||||||||||| |||| | |||| ||||||||||| ||||| | ||||||||||||||||  ||||||||||    
T  18598612 ggtcaaagtaattcatgtcaataatgcacattgca-aaaatgcgacatgtattttgaaacagatggagtata 18598542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 590
Target Start/End: Complemental strand, 18998803 - 18998757
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata 590  Q
    |||||| ||| | |||||||||||||| |||||||||||||||||||    
T  18998803 aacatcttacatactaacatttgtatttatatattagttaaaaaata 18998757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 600
Target Start/End: Complemental strand, 11761182 - 11761125
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagta 600  Q
    |||||| ||| || ||| ||||||||| ||||||||||||||||||| ||||||||||    
T  11761182 aacatcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaaagta 11761125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 588
Target Start/End: Original strand, 12359978 - 12360011
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaa 588  Q
    |||||||||||||||| |||||||||||||||||    
T  12359978 tgctaacatttgtatttatatattagttaaaaaa 12360011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 37495708 - 37495620
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaac 650  Q
    ||||||||| ||||||||||||||||||| | ||||||||||  ||  |||||||||| |||   |||| ||||| ||||||||||||||    
T  37495708 atttgtatttatatattagttaaaaaatatgatcaaagtaagatatgagaatagtgcatatt-ataaaattacaaaatgtattttgaaac 37495620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 544 - 588
Target Start/End: Complemental strand, 32400443 - 32400399
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaa 588  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||||    
T  32400443 aacatcttacatgctaatatttgtatttatatattagttaaaaaa 32400399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 535 - 587
Target Start/End: Original strand, 40267932 - 40267984
Alignment:
Q  535 aacaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaa 587  Q
    ||||||||||||||| ||| |||||||||||||||  || ||||| |||||||    
T  40267932 aacaaatcaaacatcttacatgctaacatttgtatctatgtattaattaaaaa 40267984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 1e-24; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 27334877 - 27334994
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||  |||||||||    
T  27334877 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattgaacatgtat 27334975  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  27334976 tttgaaacggaaggagtat 27334994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 559 - 660
Target Start/End: Complemental strand, 44561885 - 44561784
Alignment:
Q  559 aacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatgga 657  Q
    |||||||||||| |||| ||||||||||| || |||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||||||| |||    
T  44561885 aacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgc-aaacatgcaacatgtattttgaaacgaaagga 44561787  T
Q  658 gta 660  Q
    |||    
T  44561786 gta 44561784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 42490342 - 42490459
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  42490342 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 42490440  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  42490441 tttgaaacggagggagtat 42490459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 13499481 - 13499597
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  13499481 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 13499579  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  13499580 tttgaaacggagggagta 13499597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 536 - 628
Target Start/End: Original strand, 41252901 - 41252994
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||||||||||||| ||| ||||||||  ||||||||||||||||||| ||||    
T  41252901 acaaatcaaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtgcacattgtaaaa 41252994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 536 - 645
Target Start/End: Original strand, 3430412 - 3430521
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaataca 634  Q
    |||||||||||||  ||| |||||| |||| |||| ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||  |||| | ||    
T  3430412 acaaatcaaacattttacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtgcacattg-taaaattgca 3430510  T
Q  635 acatgtatttt 645  Q
    |||||||||||    
T  3430511 acatgtatttt 3430521  T

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Target: chr3; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 27010620 - 27010737
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| |  |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  27010620 aacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 27010718  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  27010719 tttgaaacggagggagtat 27010737  T

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Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 39866287 - 39866373
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||||||||    
T  39866287 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 39866373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 42761629 - 42761745
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||  ||||||   ||||||||    
T  42761629 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattg-taaaaattggacatgtat 42761727  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  42761728 tttgaaacggagggagta 42761745  T

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Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 662
Target Start/End: Complemental strand, 21005409 - 21005291
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| |||| |||| |||||||| ||||||| || ||||||||||||| |  |||||||||||| |||| ||||||  |||||||||    
T  21005409 aacatcttacatgctaatatttatatttatatattaattaaaaagtatggtcaaagtaagtgaagtgaatagtgcacgttgc-aaaaattgaacatgtat 21005311  T
Q  643 tttgaaacgaatggagtata 662  Q
    ||||||||| | ||||||||    
T  21005310 tttgaaacggagggagtata 21005291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 650
Target Start/End: Complemental strand, 33415915 - 33415809
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || ||||||||||||||| || ||||  ||||||||| ||||||   ||||||||    
T  33415915 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaataaataacgcacattgc-aaaaattggacatgtat 33415817  T
Q  643 tttgaaac 650  Q
    ||||||||    
T  33415816 tttgaaac 33415809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 651
Target Start/End: Original strand, 34912301 - 34912395
Alignment:
Q  557 ctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacg 651  Q
    |||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   |||||||||||||||||    
T  34912301 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtattttgaaacg 34912395  T

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Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 20765312 - 20765226
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| || ||| ||||||||| |||||||||||||||| ||  ||||||||||||||  ||||||||||||||||||||||    
T  20765312 aacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 20765226  T

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Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 36227661 - 36227575
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| |||| || ||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  36227661 aacatcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcattgcaaaaa 36227575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 628
Target Start/End: Original strand, 15332952 - 15333037
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaa-taggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||| | |||||||| |||  || |||||||||||||||| ||||    
T  15332952 aacatcttacatgctaacatttgtatttatatattagttaaaaaatttggtcaaagcaagctatgtgaatagtgcacattgtaaaa 15333037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 21797672 - 21797565
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||| ||| |||  ||||||||||||||||| ||||||   ||||||||    
T  21797672 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgc-aaaaattggacatgtat 21797574  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  21797573 tttgaaacg 21797565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 649
Target Start/End: Complemental strand, 33803626 - 33803532
Alignment:
Q  556 gctaacatttgtattcatatattagttaaaaaa-ta-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaa 649  Q
    ||||| |||| |||| ||| ||||||||||||| || |||||||||||||||  |||||||||||||||||||||| ||  |||||||||||||||    
T  33803626 gctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaatta-gacatgtattttgaaa 33803532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 567 - 660
Target Start/End: Complemental strand, 19823993 - 19823900
Alignment:
Q  567 tattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagta 660  Q
    |||| ||| |||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||||||||||| | ||||||    
T  19823993 tatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtattttgaaacggagggagta 19823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 651
Target Start/End: Complemental strand, 25527529 - 25527415
Alignment:
Q  535 aacaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatac 633  Q
    |||||||| |||||| ||| || ||| ||||||||| |||||| |||||||||||| |||| ||||||||||| ||||||   |||||||| |||||| |    
T  25527529 aacaaatcgaacatcttacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaata--tcacattgc-aaaaatgc 25527433  T
Q  634 aacatgtattttgaaacg 651  Q
     |||||||||| ||||||    
T  25527432 gacatgtatttcgaaacg 25527415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 628
Target Start/End: Original strand, 23940500 - 23940593
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaat-aggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||||||||||| ||| || |||||||| |||| |||||||||||||||||| ||||||| |||| | ||||||| ||| ||| ||| ||||    
T  23940500 acaaatcaaacatcttacatgttaacatttttatttatatattagttaaaaaataaggtcaatgtaaattatatgaaaagtacacgttgtaaaa 23940593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 592 - 661
Target Start/End: Complemental strand, 32220930 - 32220862
Alignment:
Q  592 gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagtat 661  Q
    ||||||||||||||  |||||||| ||||||||||||| || |||||||||||| ||||| |||||||||    
T  32220930 gtcaaagtaagtcaagtgaatagtacacattgcaaaaatta-aacatgtattttaaaacggatggagtat 32220862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 620
Target Start/End: Original strand, 27813443 - 27813511
Alignment:
Q  553 cttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcaca 620  Q
    |||||||||||||||||| |||||||||||||||||||  |||||| ||||  || |||||||||||||    
T  27813443 cttgctaacatttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaatagtgcaca 27813511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 618
Target Start/End: Complemental strand, 30213920 - 30213845
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgca 618  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || ||||||| |||||||  |||||||||||    
T  30213920 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgca 30213845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 38137940 - 38137854
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| ||||||| ||| |||   |||||||||| ||||||||||    
T  38137940 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaaataaatcaagcgaatagtgcagattgcaaaaa 38137854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 43181501 - 43181618
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaa-ta-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgta 641  Q
    |||||| ||| | |||| |||| |||| ||| ||||||||||||| || ||||||||||| |||  ||||||||||||||| | |||| || ||||||||    
T  43181501 aacatcttacatactaatatttatatttatacattagttaaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattacgaaaatta-aacatgta 43181599  T
Q  642 ttttgaaacgaatggagta 660  Q
    |||| ||||| ||||||||    
T  43181600 tttttaaacggatggagta 43181618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 576 - 665
Target Start/End: Complemental strand, 45613657 - 45613568
Alignment:
Q  576 attagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagtataagt 665  Q
    |||||||||||| ||  ||||||||||||||  | |||||||||||||||| |||||   ||||| ||||||||||| |||||||||||||    
T  45613657 attagttaaaaagtatagtcaaagtaagtcaagtaaatagtgcacattgca-aaaattggacatgaattttgaaacggatggagtataagt 45613568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 628
Target Start/End: Complemental strand, 6910450 - 6910365
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| || ||| ||||||||| ||| ||||||||||||||| ||| |||||||||||  ||||||||| |||||| ||||    
T  6910450 aacatcttacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaa 6910365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 22786744 - 22786639
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| ||| ||||||||| |  |||||||||||||||||||| |||||||||||  || |||||||||||||||  ||||| | | |||||||     
T  22786744 aacatcttacatgcaaacatttgttt--atatattagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacatt-aaaaaattgcgacatgtag 22786648  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  22786647 tttgaaacg 22786639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 590
Target Start/End: Original strand, 41751567 - 41751602
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata 590  Q
    |||||||||||||||| |||||||||||||||||||    
T  41751567 tgctaacatttgtatttatatattagttaaaaaata 41751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 590
Target Start/End: Original strand, 47164590 - 47164645
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgta-ttcatatattagttaaaaaata 590  Q
    |||||||||||||| ||| | |||||||||||| || |||||||||||||||||||    
T  47164590 acaaatcaaacatcttacatactaacatttgtattttatatattagttaaaaaata 47164645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 43467888 - 43467974
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||| | ||| ||| || ||||||||| || |||||||||||||||  |||||||| |||||||||||||    
T  43467888 aacatcttacctgctaatattagaatttatacatcagttaaaaagtatggtcaaagtaagtcaagtgaatagtacacattgcaaaaa 43467974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 22782380 - 22782275
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| ||| ||||||||| |  |||| ||||||||||||||| |||||||||||  || |||||||||||||||  ||||| | | |||||||     
T  22782380 aacatcttacatgcaaacatttgttt--atattttagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacatt-aaaaaattgcgacatgtag 22782284  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  22782283 tttgaaacg 22782275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 43467742 - 43467810
Alignment:
Q  403 tactctatcagtttcaaaatacatg-ctacattcaactattttacatatgttaatgcacaattttgaccg 471  Q
    ||||| ||| ||||||||||||||| ||| | ||||| |||||| |||||| ||||||||||||||||||    
T  43467742 tactccatccgtttcaaaatacatgtcta-agtcaaccattttatatatgtcaatgcacaattttgaccg 43467810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 552 - 603
Target Start/End: Original strand, 14412249 - 14412301
Alignment:
Q  552 acttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagt 603  Q
    ||||| |||| |||||||| ||||||||||||||||||| ||||||| |||||    
T  14412249 acttgttaacgtttgtatttatatattagttaaaaaatacggtcaaaataagt 14412301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 558 - 590
Target Start/End: Original strand, 15568095 - 15568127
Alignment:
Q  558 taacatttgtattcatatattagttaaaaaata 590  Q
    ||||||||||||| |||||||||||||||||||    
T  15568095 taacatttgtatttatatattagttaaaaaata 15568127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 5e-24; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 18044541 - 18044425
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  18044541 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 18044443  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| ||||||||    
T  18044442 tttgaaacggatggagta 18044425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 616899 - 616782
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  616899 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 616801  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  616800 tttgaaacggagggagtat 616782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 623292 - 623175
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  623292 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 623194  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  623193 tttgaaacggagggagtat 623175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 14237396 - 14237289
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  14237396 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 14237298  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  14237297 tttgaaacg 14237289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 32998566 - 32998459
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  32998566 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 32998468  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  32998467 tttgaaacg 32998459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 36642004 - 36642121
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata--ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgta 641  Q
    |||||| ||| |||||| ||||||||| |||||| ||||||||| ||  |||||||||||||||  ||||||||||||||||| ||||||  ||||||||    
T  36642004 aacatcttacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattgaacatgta 36642102  T
Q  642 ttttgaaacgaatggagta 660  Q
    |||||||||| | ||||||    
T  36642103 ttttgaaacggagggagta 36642121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 33700219 - 33700337
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||  || |||||||||| ||||| |||   | | ||||||||    
T  33700219 aacatcttacttactaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcattgtaaattttgcgacatgtat 33700318  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  33700319 tttgaaacggagggagtat 33700337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 41263926 - 41263840
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  41263926 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 41263840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 42587394 - 42587511
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  42587394 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 42587492  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  42587493 tttgaaacggagggagtat 42587511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 40494500 - 40494393
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||  ||||||   ||||||||    
T  40494500 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattg-gaaaaattggacatgtat 40494402  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  40494401 tttgaaacg 40494393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 5878421 - 5878346
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  5878421 tgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 5878346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 132133 - 132017
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| | |||||||||||||  |||||||||||| ||||||||| |   ||||||||    
T  132133 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaatagtgcacgttgcaaaaagt-ggacatgtat 132035  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  132034 tttgaaacggagggagta 132017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 558 - 630
Target Start/End: Original strand, 3370416 - 3370489
Alignment:
Q  558 taacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaa 630  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||||||| |||| ||| ||||||||||||||    
T  3370416 taacatttgtatttatatattaattaaaaaatatggtcaaagtaagtcatgtgaacagtccacattgcaaaaaa 3370489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 660
Target Start/End: Complemental strand, 8394449 - 8394346
Alignment:
Q  557 ctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatg 655  Q
    |||| ||||||| | ||| ||||||||||||||  |||||||||||||||  |||||||||||||||||||||| ||  ||||||||||||||||| | |    
T  8394449 ctaatatttgtacttatacattagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaatta-gacatgtattttgaaacggagg 8394351  T
Q  656 gagta 660  Q
    |||||    
T  8394350 gagta 8394346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 555 - 662
Target Start/End: Original strand, 13216878 - 13216985
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    |||||| |||| |||| ||| |||||||||||| || |||||||||||||||  |||||||||||||||||||||| ||  ||||||||||||||| | |    
T  13216878 tgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaatta-gacatgtattttgaaatgta 13216976  T
Q  654 tggagtata 662  Q
     ||||||||    
T  13216977 aggagtata 13216985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 653
Target Start/End: Complemental strand, 18090433 - 18090336
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    ||||||||||| |||| ||||||||||||||||||| | ||||| |||||||||| |||||||||||||| ||||||| | ||||||| ||| |||||||    
T  18090433 tgctaacatttatatttatatattagttaaaaaatatgatcaaa-taagtcatataaatagtgcacattg-aaaaaattcgacatgtaatttaaaacgaa 18090336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 628
Target Start/End: Complemental strand, 5173367 - 5173282
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| || ||| ||||||||| |||||||||||||| |||| | ||||||||| ||||||||||||| ||||||||||||    
T  5173367 aacatcttacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacattgcaaaa 5173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 22489433 - 22489506
Alignment:
Q  557 ctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||||||||||    
T  22489433 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 22489506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 3100641 - 3100748
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||| |||  | ||||||||||||||| ||||||   ||||||||    
T  3100641 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtaaatagtgcacattgc-aaaaattggacatgtat 3100739  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  3100740 tttgaaacg 3100748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 562 - 629
Target Start/End: Original strand, 4270256 - 4270324
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||    
T  4270256 atttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaa 4270324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 563 - 629
Target Start/End: Original strand, 6414130 - 6414197
Alignment:
Q  563 tttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||| ||| |||||||| ||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  6414130 tttgcatttatatattatttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaaaa 6414197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 660
Target Start/End: Complemental strand, 24524198 - 24524100
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagta 660  Q
    ||||||||| ||| |||||||||||| || |||||||||||||||  | ||||||||||||||| |||| |  |||||||||||||||||| | ||||||    
T  24524198 atttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgc-aaaatttgaacatgtattttgaaacggaaggagta 24524100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 2766194 - 2766280
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| |||| |||| ||| |||||||||||| || |||||||||||||||  | ||||||||||||||||||||    
T  2766194 aacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaa 2766280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 35403632 - 35403515
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| || ||| || |||||| ||| |||||||||||| || |||||||||| ||||  |||||||||||||||||| |||||   ||||||||    
T  35403632 aacatcttacatgttaatatctgtatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgca-aaaattggacatgtat 35403534  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| ||| |||||    
T  35403533 tttgaaacggatgaagtat 35403515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 38957286 - 38957200
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||  |||||||||||||| ||||||||||| |||  | ||||||||||||||||||||    
T  38957286 aacatcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaaatcaagttaatagtgcacattgcaaaaa 38957200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 622
Target Start/End: Original strand, 40204879 - 40204947
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacatt 622  Q
    |||||||||||||||| |||||||||| |||||||| | |||||||||||   ||||||||||||||||    
T  40204879 tgctaacatttgtatttatatattagtcaaaaaatatgttcaaagtaagttggatgaatagtgcacatt 40204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 11637898 - 11637812
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| | ||||||| ||| | |||||||||| || ||||||| |||||||  |||||||||||||||| |||||    
T  11637898 aacatcttacatgctaatacttgtatttatacactagttaaaaagtacggtcaaaataagtcaagtgaatagtgcacattgtaaaaa 11637812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 590
Target Start/End: Original strand, 40716669 - 40716715
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata 590  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||||||    
T  40716669 aacatcttacatgctaaaatttgtatttatatattagttaaaaaata 40716715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 640
Target Start/End: Original strand, 11162397 - 11162500
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaataca 634  Q
    |||||||||||||| |   ||||||||||||| || ||||||||| ||||||||| |||||||||| ||  ||| ||||||||| ||||| |||| |||     
T  11162397 acaaatcaaacatcttttatgctaacatttgtctttatatattag-taaaaaatatggtcaaagtatgttttattaatagtgca-attgctaaaattacg 11162494  T
Q  635 acatgt 640  Q
    ||||||    
T  11162495 acatgt 11162500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 663
Target Start/End: Complemental strand, 36167181 - 36167073
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    |||||| ||||||||| ||| |||||| ||||| ||   |||||||||||||  |||||||| ||||||||| |||||   ||||||||||| ||||| |    
T  36167181 tgctaatatttgtatttatacattagtgaaaaagtataatcaaagtaagtcaagtgaatagtacacattgca-aaaatgatacatgtattttaaaacgga 36167083  T
Q  654 tggagtataa 663  Q
     |||||||||    
T  36167082 gggagtataa 36167073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 5e-24; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 42890489 - 42890605
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || ||||||| ||||||| |||||||||||||||||| ||||||   ||||||||    
T  42890489 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgc-aaaaattggacatgtat 42890587  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| ||||||||    
T  42890588 tttgaaacggatggagta 42890605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 28061661 - 28061778
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  28061661 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 28061759  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  28061760 tttgaaacggagggagtat 28061778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 536 - 660
Target Start/End: Complemental strand, 8683942 - 8683818
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaataca 634  Q
    |||||||||||| |||  ||||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||| |||||||| | ||||||       
T  8683942 acaaatcaaacaacatctttgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacatttc-aaaaattgg 8683844  T
Q  635 acatgtattttgaaacgaatggagta 660  Q
    ||||||||||| ||||||||||||||    
T  8683843 acatgtattttaaaacgaatggagta 8683818  T

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Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 36623424 - 36623308
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  36623424 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 36623326  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  36623325 tttgaaacggagggagta 36623308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 39130072 - 39130188
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||| ||||||  |||||||||||||||||||||| || || ||||||    
T  39130072 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacattgcaaaaatta-aagatgtat 39130170  T
Q  643 tttgaaacgaatggagta 660  Q
    ||| ||||| ||||||||    
T  39130171 tttaaaacggatggagta 39130188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 47156143 - 47156027
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  47156143 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 47156045  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  47156044 tttgaaacggagggagta 47156027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 536 - 663
Target Start/End: Complemental strand, 6174960 - 6174833
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaataca 634  Q
    |||||||||||||| ||| ||||||  |||||||| ||| ||||||||||||||| ||||| ||||||||| ||||||||||||| |||| ||||||       
T  6174960 acaaatcaaacatcttacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcaccttgc-aaaaattgg 6174862  T
Q  635 acatgtattttgaaacgaatggagtataa 663  Q
    |||| |||||||||||| ||||| |||||    
T  6174861 acatatattttgaaacggatggaatataa 6174833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 41898104 - 41897987
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || | |||||||||||||  |||||||||||||||||| |||||   ||||||||    
T  41898104 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgca-aaaattggacatgtat 41898006  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  41898005 tttgaaacggagggagtat 41897987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 48602552 - 48602466
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  48602552 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattggaaaaa 48602466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 36341736 - 36341620
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| | ||||||||| |||| |||| ||||||||||| ||  || ||| |||||||| |||||||||||||||||||||| | | ||||||||    
T  36341736 aacatcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaaa-tgcgacatgtat 36341638  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||||||||||||    
T  36341637 tttgaaacgaatggagta 36341620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 527 - 661
Target Start/End: Original strand, 38851972 - 38852110
Alignment:
Q  527 atttgtcga-acaaatcaaaca---tcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    ||||||||| ||||||||||||   || ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  38851972 atttgtcgagacaaatcaaacaatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacat 38852071  T
Q  622 tgcaaaaaatacaacatgtattttgaaacgaatggagtat 661  Q
    ||  ||||||   ||||||||||||||||| | |||||||    
T  38852072 tg-gaaaaattggacatgtattttgaaacggagggagtat 38852110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 40090064 - 40090150
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||| |||||    
T  40090064 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaa 40090150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 7457868 - 7457983
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||||| |  |||||||||||||||||||||  ||  ||||||||    
T  7457868 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt-aagtgaatagtgcacattgcaaaactta-gacatgtat 7457965  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| ||||||||    
T  7457966 tttgaaacggatggagta 7457983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 20885219 - 20885103
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||||||||||  |||||||| |||||||  ||||||   ||||||||    
T  20885219 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattg-taaaaattggacatgtat 20885121  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  20885120 tttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 555 - 651
Target Start/End: Original strand, 27045565 - 27045661
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacg 651  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||  ||| ||||||||  ||||||  |||| | |||||||||||||||||||    
T  27045565 tgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaaccatgtgaatagtatacattg-taaaattgcaacatgtattttgaaacg 27045661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 40256173 - 40256066
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||| |||||||||| |||||   ||||||||    
T  40256173 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgca-aaaattggacatgtat 40256075  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  40256074 tttgaaacg 40256066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 46479945 - 46479838
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaa-ataggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||  | |||||||||||||||   ||||||||||||||| ||||| || |||||||||    
T  46479945 aacatcttacatgctaatatttgtatttatacattagttaaaaattttggtcaaagtaagtcaagcgaatagtgcacattgtaaaaatta-aacatgtat 46479847  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  46479846 tttgaaacg 46479838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 16778621 - 16778504
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||| ||  |||||||||||||||||||||  |  | |||||||    
T  16778621 aacatcttacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgcaaaagttgga-catgtat 16778523  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  16778522 tttgaaacggagggagtat 16778504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 44732128 - 44732042
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || | |||||||||||||  ||||||||||||||||||||||    
T  44732128 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaa 44732042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 558 - 622
Target Start/End: Original strand, 49110630 - 49110695
Alignment:
Q  558 taacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacatt 622  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||| ||||||    
T  49110630 taacatttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagtacacatt 49110695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 557 - 623
Target Start/End: Complemental strand, 3785623 - 3785556
Alignment:
Q  557 ctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattg 623  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||   |||||||||||||| ||||    
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatatgaatagtgcatattg 3785556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 662
Target Start/End: Original strand, 4131649 - 4131767
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| ||||||| |||||||| ||||||||||||||||||| ||| ||||||||| || ||||||||  ||||||  |||| | | |||| |||    
T  4131649 aacatcttacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattg-taaaattgcgacatatat 4131747  T
Q  643 tttgaaacgaatggagtata 662  Q
    ||||||||| ||| ||||||    
T  4131748 tttgaaacggatgaagtata 4131767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 650
Target Start/End: Complemental strand, 7439019 - 7438913
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||||||| |||||||  |||||| |||| |||||||||| ||  ||||||||    
T  7439019 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaataatgcatattgcaaaaatta-gacatgtat 7438921  T
Q  643 tttgaaac 650  Q
    ||||||||    
T  7438920 tttgaaac 7438913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 6766696 - 6766813
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||||||||| ||| ||| ||||||||||||||| ||||||| ||||| || |||||| |||| ||||  |||| | | ||||||||    
T  6766696 aacatcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcagattg-taaaattgcgacatgtat 6766794  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  6766795 tttgaaacggagggagtat 6766813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 537 - 662
Target Start/End: Complemental strand, 7169249 - 7169124
Alignment:
Q  537 caaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaa 635  Q
    ||||| ||||||| ||  || ||| ||||||||| |||||||||||||||||||  |||||||||| |||| ||||||   |||||||| |||| ||  |    
T  7169249 caaattaaacatcttatatgttaatatttgtatttatatattagttaaaaaatatagtcaaagtaaatcatgtgaatatgacacattgc-aaaattatga 7169151  T
Q  636 catgtattttgaaacgaatggagtata 662  Q
    |||||||||||||||| |||| |||||    
T  7169150 catgtattttgaaacggatggtgtata 7169124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 32431504 - 32431590
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| | |||| ||||||||| ||| |||||||||||| || |||||||||||||||  |||||| |||||||||||||||    
T  32431504 aacatcttacatactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaa 32431590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 629
Target Start/End: Original strand, 46322129 - 46322197
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    ||||||||| ||| |||||||||||| || |||||||||||||||  |||||| |||||||||||||||    
T  46322129 atttgtattgatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaa 46322197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 611
Target Start/End: Complemental strand, 34750625 - 34750550
Alignment:
Q  537 caaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaa 611  Q
    ||||||||||||| ||| || |||||||| ||||  ||||||||||||||| || |||||||||||||||| ||||    
T  34750625 caaatcaaacatcttacatgttaacatttttatttgtatattagttaaaaagtagggtcaaagtaagtcatgtgaa 34750550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 663
Target Start/End: Complemental strand, 35117241 - 35117123
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaataggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtatt 643  Q
    |||||| ||| |||||| |||| |||| ||| |||||||||||    |||||||||||||||  ||||||||||| ||||| ||||||  |||| |||||    
T  35117241 aacatcttacatgctaatatttatatttatacattagttaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgc-aaaaattgaacaggtatt 35117143  T
Q  644 ttgaaacgaatggagtataa 663  Q
    || ||||| | |||||||||    
T  35117142 ttaaaacggagggagtataa 35117123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 41134634 - 41134745
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaataggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtatt 643  Q
    |||||| ||| |||||| ||||||||| ||| |||||||| |     ||||||||||||||| ||||||||| |||||||  ||||||  ||||||||||    
T  41134634 aacatcttacatgctaatatttgtatttatacattagttatat----ggtcaaagtaagtcaaatgaatagtacacattg-taaaaattgaacatgtatt 41134728  T
Q  644 ttgaaacgaatggagta 660  Q
    || ||||| ||||||||    
T  41134729 ttaaaacggatggagta 41134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 2198718 - 2198601
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| |||||| ||| ||||||||| ||| |||||||||||| || | ||||| ||| ||| ||||||||| ||||||||||| | ||| |||| |||    
T  2198718 aacatcttacttgttaatatttgtatttatacattagttaaaaagtatgttcaaaataaatcagatgaatagtacacattgcaaatattac-acatctat 2198620  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||| ||||| | |||||||    
T  2198619 tttaaaacggagggagtat 2198601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 628
Target Start/End: Original strand, 16870641 - 16870711
Alignment:
Q  559 aacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    ||||||| |||| ||||||||||||| ||||| ||||||||||||| || ||||||||||| |||| ||||    
T  16870641 aacatttatatttatatattagttaacaaatatggtcaaagtaagttatttgaatagtgcatattgtaaaa 16870711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 36585225 - 36585139
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||| ||||||| |||| || ||| ||| |||||||  ||||||||||||||||||||||    
T  36585225 aacatcttacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacattgcaaaaa 36585139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 37467464 - 37467531
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattg 623  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||||||  | ||| ||||||||||||||    
T  37467464 tgctaacatttgtatttatatattagttaaaaaatatggttaaagtaa--cctataaatagtgcacattg 37467531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 580 - 629
Target Start/End: Complemental strand, 45331992 - 45331942
Alignment:
Q  580 gttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  45331992 gttaaaaaatatggtcaaagtaagtcatatgaataatgcatattgcaaaaa 45331942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 46103516 - 46103578
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtca 605  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||    
T  46103516 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtca 46103578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 628
Target Start/End: Complemental strand, 8656200 - 8656105
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata---ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||||| ||||| || ||||||||||||| ||||||||| ||||||| |   ||| ||||||| | || |||||||||||||||| ||||    
T  8656200 acaaattaaacaacatacatgataacatttgtatttatatattagataaaaaaaaaatggtaaaagtaaattatgtgaatagtgcacattgtaaaa 8656105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 651
Target Start/End: Original strand, 25566705 - 25566800
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacg 651  Q
    |||||| ||||||||| ||| |||||||| ||| || |||||||||||||||  ||||||||||||||||  ||||||   |||||||||||||||||    
T  25566705 tgctaatatttgtatt-atacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattg-taaaaattggacatgtattttgaaacg 25566800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 628
Target Start/End: Complemental strand, 41088703 - 41088618
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| || ||| ||||| ||| ||| ||||||||||||||| ||||||||||||||| ||||| |||||| |||| ||||    
T  41088703 aacatcttacatgttaatatttgcatttatacattagttaaaaaatatggtcaaagtaagtcagatgaacagtgcatattgtaaaa 41088618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 603
Target Start/End: Original strand, 38767221 - 38767265
Alignment:
Q  560 acatttgtattcatatattagttaaaaaata-ggtcaaagtaagt 603  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  38767221 acatttgtatttatatattagttaaaaaatatggtcaaagtaagt 38767265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 35570195 - 35570307
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata------ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaaca 637  Q
    |||||| ||| |||||| |||||||||  |||||||||||||||| |      |||||||||||||  | ||||||||||||||||  |||| | | |||    
T  35570195 aacatcttacatgctaaaatttgtatttgtatattagttaaaaaaaaaaatatggtcaaagtaagttttgtgaatagtgcacattg-taaaattgcgaca 35570293  T
Q  638 tgtattttgaaacg 651  Q
    ||||||||||||||    
T  35570294 tgtattttgaaacg 35570307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 42662284 - 42662196
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacg 651  Q
    ||||||||| |||||||||||||||| || ||||||||||||  || |||||| | |||||||| |||| | | |||||||||||||||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaagtaag-aatgtgaataatacacattgc-aaaattgcgacatgtattttgaaacg 42662196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 653
Target Start/End: Original strand, 49101959 - 49102068
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaataggtc-aaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| ||| || ||||||||| || |||||||||||||||| | | ||| ||||| |||||||||||||| ||||  |||| |  |||||||||    
T  49101959 aacatcttacatgcaaaaatttgtatttatgtattagttaaaaaatatgacaaaaataagttatatgaatagtgcatattg-taaaattgtaacatgtat 49102057  T
Q  643 tttgaaacgaa 653  Q
    |||||| ||||    
T  49102058 tttgaagcgaa 49102068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 629
Target Start/End: Complemental strand, 30342177 - 30342104
Alignment:
Q  557 ctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||| ||||||||| ||| |||||||||||| ||  |||||||||| |||  |||||| |||||||||||||||    
T  30342177 ctaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagtgaataatgcacattgcaaaaa 30342104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 628
Target Start/End: Complemental strand, 42877502 - 42877417
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| | |||| |||| |||| ||| |||||||||||| || ||||||||||||| | || ||||||||||||| |||||    
T  42877502 aacatcttacattctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacattacaaaa 42877417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 588
Target Start/End: Original strand, 47525993 - 47526026
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaa 588  Q
    |||||||||||||||| |||||||||||||||||    
T  47525993 tgctaacatttgtatttatatattagttaaaaaa 47526026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 622
Target Start/End: Complemental strand, 26161701 - 26161633
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacatt 622  Q
    |||||| ||||||||| ||||||||||||||||  | ||||||| ||| |||| |||||||||| ||||    
T  26161701 tgctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtgcgcatt 26161633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 5e-24; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 24624087 - 24624203
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||  |||||||||    
T  24624087 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattgaacatgtat 24624185  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  24624186 tttgaaacggagggagta 24624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 32414825 - 32414942
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  |||||||||||||||| |||||||   ||||||||    
T  32414825 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattg-aaaaaattggacatgtat 32414923  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  32414924 tttgaaacggagggagtat 32414942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 6563342 - 6563226
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| || |||||||||||||||  | ||||||||||||||| ||||||  |||||||||    
T  6563342 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgc-aaaaattgaacatgtat 6563244  T
Q  643 tttgaaacgaatggagta 660  Q
    ||||||||| | ||||||    
T  6563243 tttgaaacggagggagta 6563226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 544 - 663
Target Start/End: Original strand, 19088104 - 19088223
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||| |  |||||||||||||||  ||||||||||||||||| ||||||   ||||||||    
T  19088104 aacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 19088202  T
Q  643 tttgaaacgaatggagtataa 663  Q
    ||||||||| | |||||||||    
T  19088203 tttgaaacggagggagtataa 19088223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 544 - 662
Target Start/End: Original strand, 18668834 - 18668952
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||||||||| |||||||| ||||||  ||||||||||||||||| ||||||   ||||||||    
T  18668834 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgc-aaaaattggacatgtat 18668932  T
Q  643 tttgaaacgaatggagtata 662  Q
    ||||||||| | ||||||||    
T  18668933 tttgaaacggagggagtata 18668952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 649
Target Start/End: Original strand, 17213930 - 17214035
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| ||  |||||||||||||| ||||||||||||||||||||||| ||  ||||||||    
T  17213930 aacatcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaatta-gacatgtat 17214028  T
Q  643 tttgaaa 649  Q
    |||||||    
T  17214029 tttgaaa 17214035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 650
Target Start/End: Original strand, 20226423 - 20226550
Alignment:
Q  527 atttgtcga-acaaatcaaaca---tcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    ||||||||| ||||||||||||   || ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||||||| |||||||||||||||    
T  20226423 atttgtcgagacaaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacat 20226522  T
Q  622 tgcaaaaaatacaacatgtattttgaaac 650  Q
    ||| ||||||   ||||||||||||||||    
T  20226523 tgc-aaaaattgtacatgtattttgaaac 20226550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 650
Target Start/End: Original strand, 22120407 - 22120534
Alignment:
Q  527 atttgtcga-acaaatcaaaca---tcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacat 621  Q
    ||||||||| ||||||||||||   || ||| |||||| ||||||||| ||| |||||||||||| || ||||||||||||||| |||||||||||||||    
T  22120407 atttgtcgagacaaatcaaacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacat 22120506  T
Q  622 tgcaaaaaatacaacatgtattttgaaac 650  Q
    ||| ||||||   ||||||||||||||||    
T  22120507 tgc-aaaaattgtacatgtattttgaaac 22120534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 4440966 - 4440859
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||||||||||||| |||| |||  |||||| || ||||||||||||| |||||||||||||||||| | |||||| |||||| |||    
T  4440966 aacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtgcacattac-aaaaatgcaacatatat 4440868  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  4440867 tttgaaacg 4440859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 661
Target Start/End: Complemental strand, 4148047 - 4147930
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  |||||| ||||||||||| |||||   ||||||||    
T  4148047 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgca-aaaattggacatgtat 4147949  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  4147948 tttgaaacggagggagtat 4147930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 17257797 - 17257914
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| |||||||||  || |||||||||||| || |||||||||||||||  |||||| ||||||||||||||| ||  ||||||||    
T  17257797 aacatcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaatta-gacatgtat 17257895  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||  |||||||||    
T  17257896 tttgaaacagatggagtat 17257914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 15383076 - 15383183
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || ||| ||||||||||| ||||||| |||||||||| ||||||   ||||||||    
T  15383076 aacatcttacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgc-aaaaattggacatgtat 15383174  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  15383175 tttgaaacg 15383183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 651
Target Start/End: Complemental strand, 22054888 - 22054781
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||| ||||| ||||||   ||||||||    
T  22054888 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgc-aaaaattggacatgtat 22054790  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  22054789 tttgaaacg 22054781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 555 - 662
Target Start/End: Complemental strand, 29790311 - 29790204
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    |||||| ||||||||| |||||||||||||||| || |||| ||||||||||| ||||||||  ||||||| |||| | | ||||||||||||||||  |    
T  29790311 tgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgc-aaaattgcgacatgtattttgaaacaga 29790213  T
Q  654 tggagtata 662  Q
    |||||||||    
T  29790212 tggagtata 29790204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 538 - 628
Target Start/End: Original strand, 19240732 - 19240823
Alignment:
Q  538 aaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||||| ||| ||||||| || ||||||||| ||||||||||||||||||| ||||||| ||||| || ||||||||  |||||||||||    
T  19240732 aaatcaaatatcttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaatagtatacattgcaaaa 19240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 538 - 628
Target Start/End: Complemental strand, 31869830 - 31869739
Alignment:
Q  538 aaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||||| | ||||||||||| | ||  |||||||| |||||| ||||    
T  31869830 aaatcaaacatcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaa 31869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 628
Target Start/End: Complemental strand, 28477858 - 28477784
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||||||||| |||||||||||||||| || |||||||| ||||||| |||||||| ||||||||||||    
T  28477858 tgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaa 28477784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 556 - 661
Target Start/End: Complemental strand, 32671920 - 32671815
Alignment:
Q  556 gctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaat 654  Q
    ||||| ||||||||| ||| |||||||||||| || ||||||||||||| |  |||||||||||||||||| |||||   ||||||||||||||||| |     
T  32671920 gctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgca-aaaattggacatgtattttgaaacggag 32671822  T
Q  655 ggagtat 661  Q
    |||||||    
T  32671821 ggagtat 32671815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 601
Target Start/End: Original strand, 3623848 - 3623913
Alignment:
Q  536 acaaatcaaacatcatacttgctaacatttgtattcatatattagttaaaaaataggtcaaagtaa 601  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||||||||   |||||||||||    
T  3623848 acaaatcaaacatcttacatgctaacatttgtatttatatattagttaaaaatatggtcaaagtaa 3623913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 544 - 655
Target Start/End: Complemental strand, 17155265 - 17155154
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||||||||||||| |||| |||||||  || || | |||||||| ||||| ||||||||| |||||  |||||| || ||||||||    
T  17155265 aacatcttacatgctaacatttgtatttatatgttagttatgaagtatgatcaaagtaggtcatgtgaatagtgaacattttaaaaaa-acgacatgtat 17155167  T
Q  643 tttgaaacgaatg 655  Q
    |||||||||||||    
T  17155166 tttgaaacgaatg 17155154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 562 - 649
Target Start/End: Original strand, 21540793 - 21540880
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaa 649  Q
    ||||||||| ||| | ||||| |||| || ||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||    
T  21540793 atttgtatttataaactagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaatta-aacatgtattttgaaa 21540880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 630
Target Start/End: Complemental strand, 1040940 - 1040853
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaa 630  Q
    |||||| ||| || ||| ||||||||| ||| |||||||||||| || ||||||||||| |||  |||||||||||||||||||||||    
T  1040940 aacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaaa 1040853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 628
Target Start/End: Complemental strand, 29693981 - 29693914
Alignment:
Q  562 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    ||||||||| |||||||||||||||| || |||||||| ||||||| |||||||| ||||||||||||    
T  29693981 atttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaa 29693914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 555 - 628
Target Start/End: Complemental strand, 15337593 - 15337519
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||| || |||||| |||| |||| ||||    
T  15337593 tgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaa 15337519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 661
Target Start/End: Original strand, 20437177 - 20437277
Alignment:
Q  562 atttgtattcatatattagttaaaaaa-tagg-tcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagt 659  Q
    ||||||||| ||| ||||||||||||| || | |||||||||||||  |||||||||||||||||||||| ||  ||||||||||  ||||| |||||||    
T  20437177 atttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaatta-gacatgtatttgaaaacggatggagt 20437275  T
Q  660 at 661  Q
    ||    
T  20437276 at 20437277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 622
Target Start/End: Original strand, 10298730 - 10298798
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacatt 622  Q
    |||||||||||||||| |||||||||| |||||||| ||||||| ||||  || |||||||||||||||    
T  10298730 tgctaacatttgtatttatatattagtgaaaaaatatggtcaaattaagctatgtgaatagtgcacatt 10298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 576 - 629
Target Start/End: Original strand, 3989441 - 3989495
Alignment:
Q  576 attagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||||||||| || |||||||||||||||  ||||||||||||||||||||||    
T  3989441 attagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 3989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 567 - 660
Target Start/End: Original strand, 25475977 - 25476070
Alignment:
Q  567 tattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagta 660  Q
    |||| ||| |||||||||||| || |||||||||||||||  |||||| |||||||||| ||||||   ||||||||||||||||| | ||||||    
T  25475977 tatttatacattagttaaaaagtaaggtcaaagtaagtcaagtgaataatgcacattgc-aaaaattggacatgtattttgaaacggagggagta 25476070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 660
Target Start/End: Complemental strand, 10520536 - 10520468
Alignment:
Q  591 ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagta 660  Q
    ||||||||||||||| ||||||| | ||||||||| |||||  |||||||||||||||||| | ||||||    
T  10520536 ggtcaaagtaagtcaaatgaataatacacattgca-aaaattgaacatgtattttgaaacggaaggagta 10520468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 603
Target Start/End: Original strand, 23158055 - 23158115
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaat-aggtcaaagtaagt 603  Q
    |||||| ||| || ||||||||||||| ||||||||||||||||||  |||||||||||||    
T  23158055 aacatcttacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagt 23158115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 590
Target Start/End: Complemental strand, 8101716 - 8101670
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata 590  Q
    |||||| ||| || ||||||||||||| |||||||||||||||||||    
T  8101716 aacatcttacatgttaacatttgtatttatatattagttaaaaaata 8101670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 24955542 - 24955628
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||| |||||| ||||||||| ||  ||||||||||||||| | ||||| |||||||  |||||| |||||||| ||||||    
T  24955542 aacatcttacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataagtcaagtgaataatgcacattacaaaaa 24955628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 599
Target Start/End: Complemental strand, 1260535 - 1260490
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagt 599  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||    
T  1260535 tgctaacaattgtatttatatattagttaaaaaatatggtcaaagt 1260490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 588
Target Start/End: Complemental strand, 5495354 - 5495321
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaa 588  Q
    |||||||||||||||| |||||||||||||||||    
T  5495354 tgctaacatttgtatttatatattagttaaaaaa 5495321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 655
Target Start/End: Original strand, 14214070 - 14214170
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaa 653  Q
    ||||||||||| |||| ||||||| ||||||||||| |||||||  |||||  ||||||| ||||||||   |||| | | ||||||||||| |||||||    
T  14214070 tgctaacatttatatttatatattggttaaaaaatacggtcaaaacaagtcggatgaataatgcacatt-ataaaattgcgacatgtattttaaaacgaa 14214168  T
Q  654 tg 655  Q
    ||    
T  14214169 tg 14214170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 622
Target Start/End: Complemental strand, 2360095 - 2360027
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacatt 622  Q
    ||||||||||| |||| |||||||||||||||| ||  |||||||||| | |||| |||||| ||||||    
T  2360095 tgctaacatttttatttatatattagttaaaaattatagtcaaagtaaattatataaatagtacacatt 2360027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 556 - 662
Target Start/End: Original strand, 100805 - 100911
Alignment:
Q  556 gctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaat 654  Q
    ||||| ||||||||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||||| |||| |  |||||||||||||||||| |     
T  100805 gctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgc-aaaagttgaacatgtattttgaaacggag 100903  T
Q  655 ggagtata 662  Q
    ||||||||    
T  100904 ggagtata 100911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 161983 - 162100
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| ||||||||| ||| |||||||||||| || |||||| ||||||||  ||||||||||||||| |||||| ||  ||||||||    
T  161983 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaatta-gacatgtat 162081  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||||||||| | |||||||    
T  162082 tttgaaacggagggagtat 162100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 161847 - 161903
Alignment:
Q  413 gtttcaaaatacatgctacattcaactattttacatatgttaatgcacaattttgac 469  Q
    ||||||||||||||| |  | ||||| | ||||||||||| ||||||||||||||||    
T  161847 gtttcaaaatacatgttcaagtcaaccactttacatatgtcaatgcacaattttgac 161903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 651
Target Start/End: Original strand, 67915 - 68022
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| || ||| ||||||||| ||| |||||||||||| || ||||||||||||||| |||||||||||||||| | ||||||   ||||||||    
T  67915 aacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttc-aaaaattggacatgtat 68013  T
Q  643 tttgaaacg 651  Q
    |||||||||    
T  68014 tttgaaacg 68022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 628
Target Start/End: Original strand, 8979 - 9064
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaat-aggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||  ||||||||||||| || |||||| |||| |||| ||||    
T  8979 aacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaa 9064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 628
Target Start/End: Original strand, 138176 - 138261
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaat-aggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||  ||||||||||||| || |||||| |||| |||| ||||    
T  138176 aacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaa 138261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 555 - 617
Target Start/End: Complemental strand, 4053 - 3990
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgc 617  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||  || ||||||||||    
T  4053 tgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgc 3990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 661
Target Start/End: Original strand, 13863 - 13980
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtat 642  Q
    |||||| ||| |||||| |||| |||| ||| |||||||||||| || |||||||||||||||  ||||||||||||||| |||| | ||  ||||||||    
T  13863 aacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaatatta-gacatgtat 13961  T
Q  643 tttgaaacgaatggagtat 661  Q
    ||| ||||| | |||||||    
T  13962 tttaaaacggagggagtat 13980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 661
Target Start/End: Complemental strand, 9433 - 9371
Alignment:
Q  598 gtaagtcatatgaatagtgcacattgcaaaaaatacaacatgtattttgaaacgaatggagtat 661  Q
    ||||||||  |||||||||||||||||||||| ||  ||||||||||||||||| | |||||||    
T  9433 gtaagtcaagtgaatagtgcacattgcaaaaatta-gacatgtattttgaaacggagggagtat 9371  T

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Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 71065 - 70991
Alignment:
Q  555 tgctaacatttgtattcatatattagttaaaaaataggtcaaagtaagtcatatgaatagtgcacattgcaaaaa 629  Q
    |||||| ||||||||| ||| ||||||||||||   ||||||| |||||||  ||||||||||| ||||||||||    
T  71065 tgctaatatttgtatttatacattagttaaaaatatggtcaaaataagtcaagtgaatagtgcatattgcaaaaa 70991  T

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Target: scaffold0262 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 628
Target Start/End: Complemental strand, 22896 - 22811
Alignment:
Q  544 aacatcatacttgctaacatttgtattcatatattagttaaaaaat-aggtcaaagtaagtcatatgaatagtgcacattgcaaaa 628  Q
    |||||| ||| |||||||||||||||| |||||| |||||||||||  ||||||| ||||| || |||||| |||| |||| ||||    
T  22896 aacatcttacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaa 22811  T

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Target: scaffold0099 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 628
Target Start/End: Original strand, 28796 - 28884
Alignment:
Q  542 caaacatcatacttgctaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtcatatgaatag-tgcacattgcaaaa 628  Q
    |||||||| ||  |||||| ||||||||| ||| ||||||||||||||| ||||||||||||  || ||||||| ||||||||| ||||    
T  28796 caaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagttgcacattgtaaaa 28884  T

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