View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19909_high_34 (Length: 236)

Name: NF19909_high_34
Description: NF19909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19909_high_34
NF19909_high_34
[»] chr7 (41 HSPs)
chr7 (87-221)||(39960753-39960888)
chr7 (23-60)||(584409-584446)
chr7 (23-66)||(19785606-19785649)
chr7 (23-66)||(21849673-21849716)
chr7 (23-66)||(32327869-32327912)
chr7 (23-66)||(42584360-42584403)
chr7 (24-66)||(31503020-31503062)
chr7 (24-66)||(45822987-45823029)
chr7 (23-60)||(43073773-43073810)
chr7 (23-60)||(46578824-46578861)
chr7 (26-66)||(2887467-2887507)
chr7 (23-66)||(2649111-2649154)
chr7 (23-66)||(16875689-16875732)
chr7 (23-66)||(18235096-18235139)
chr7 (23-66)||(22624525-22624568)
chr7 (23-66)||(22918373-22918416)
chr7 (23-66)||(24302618-24302661)
chr7 (23-66)||(25428391-25428434)
chr7 (23-66)||(27118875-27118918)
chr7 (23-62)||(28472100-28472139)
chr7 (23-66)||(28536659-28536702)
chr7 (23-66)||(33938242-33938285)
chr7 (23-66)||(35421689-35421732)
chr7 (23-66)||(37411286-37411329)
chr7 (27-66)||(39960907-39960946)
chr7 (23-66)||(41821011-41821054)
chr7 (23-66)||(42912238-42912281)
chr7 (23-66)||(46944516-46944559)
chr7 (23-66)||(47988231-47988274)
chr7 (23-61)||(22326558-22326596)
chr7 (24-66)||(25650985-25651027)
chr7 (23-61)||(26838005-26838043)
chr7 (24-66)||(28587146-28587188)
chr7 (23-61)||(29410118-29410156)
chr7 (23-61)||(32267561-32267599)
chr7 (24-66)||(35497868-35497910)
chr7 (23-61)||(39983294-39983332)
chr7 (24-66)||(42259337-42259379)
chr7 (23-60)||(9603692-9603729)
chr7 (23-60)||(9831263-9831300)
chr7 (25-66)||(39403727-39403768)
[»] chr8 (41 HSPs)
chr8 (23-66)||(543600-543643)
chr8 (23-66)||(2031417-2031460)
chr8 (23-66)||(23606394-23606437)
chr8 (23-66)||(29867468-29867511)
chr8 (23-66)||(34356725-34356768)
chr8 (23-66)||(38896486-38896529)
chr8 (23-61)||(5449334-5449372)
chr8 (23-61)||(17911167-17911205)
chr8 (24-66)||(26393847-26393889)
chr8 (26-66)||(11181457-11181497)
chr8 (23-63)||(17834111-17834151)
chr8 (26-66)||(19715441-19715481)
chr8 (23-59)||(44263141-44263177)
chr8 (23-66)||(548051-548094)
chr8 (23-66)||(4135898-4135941)
chr8 (23-66)||(9724795-9724838)
chr8 (23-66)||(15595668-15595711)
chr8 (23-66)||(21545467-21545510)
chr8 (23-66)||(22553068-22553111)
chr8 (23-66)||(26747039-26747082)
chr8 (23-66)||(28719893-28719936)
chr8 (23-66)||(30526368-30526411)
chr8 (23-66)||(31230506-31230549)
chr8 (23-66)||(31602739-31602782)
chr8 (23-66)||(32629620-32629663)
chr8 (26-60)||(2120293-2120327)
chr8 (23-61)||(10709132-10709170)
chr8 (28-66)||(17949463-17949501)
chr8 (24-66)||(29342918-29342960)
chr8 (24-66)||(37964864-37964906)
chr8 (23-61)||(39629053-39629091)
chr8 (23-61)||(39638603-39638641)
chr8 (26-66)||(9471021-9471061)
chr8 (26-66)||(12000706-12000746)
chr8 (23-59)||(12988016-12988052)
chr8 (26-66)||(24333222-24333262)
chr8 (26-66)||(35544020-35544060)
chr8 (26-62)||(40488351-40488387)
chr8 (23-59)||(42827521-42827557)
chr8 (23-63)||(42981404-42981444)
chr8 (23-63)||(42981502-42981542)
[»] chr6 (31 HSPs)
chr6 (23-66)||(17275272-17275315)
chr6 (23-66)||(6334974-6335017)
chr6 (23-66)||(6791800-6791843)
chr6 (23-66)||(8550380-8550423)
chr6 (23-66)||(10027977-10028020)
chr6 (23-66)||(17442017-17442060)
chr6 (23-66)||(29455553-29455596)
chr6 (23-66)||(31504058-31504101)
chr6 (23-66)||(1114377-1114420)
chr6 (23-66)||(2603423-2603466)
chr6 (23-66)||(3888773-3888816)
chr6 (23-66)||(4981164-4981207)
chr6 (23-66)||(5489793-5489836)
chr6 (23-66)||(6612586-6612629)
chr6 (23-66)||(8201671-8201714)
chr6 (23-66)||(8415031-8415074)
chr6 (23-66)||(9038275-9038318)
chr6 (23-66)||(9461785-9461828)
chr6 (23-66)||(11173443-11173486)
chr6 (23-66)||(12499498-12499541)
chr6 (23-66)||(12509360-12509403)
chr6 (23-66)||(29344186-29344229)
chr6 (23-61)||(78207-78245)
chr6 (23-61)||(690304-690342)
chr6 (23-61)||(4147843-4147881)
chr6 (23-61)||(14310799-14310837)
chr6 (24-66)||(20605781-20605823)
chr6 (23-61)||(29901406-29901444)
chr6 (23-63)||(11000577-11000617)
chr6 (26-66)||(19098732-19098772)
chr6 (26-66)||(26409261-26409301)
[»] chr4 (28 HSPs)
chr4 (23-66)||(19806854-19806897)
chr4 (23-66)||(48510663-48510706)
chr4 (26-66)||(29976927-29976967)
chr4 (23-66)||(27955857-27955900)
chr4 (23-62)||(37390706-37390745)
chr4 (23-66)||(37730781-37730824)
chr4 (23-66)||(47477000-47477043)
chr4 (23-66)||(10555123-10555166)
chr4 (23-66)||(15986400-15986443)
chr4 (23-66)||(17609005-17609048)
chr4 (23-66)||(22019301-22019344)
chr4 (23-66)||(23662736-23662779)
chr4 (23-66)||(26740244-26740287)
chr4 (23-66)||(32402891-32402934)
chr4 (23-66)||(35836263-35836306)
chr4 (23-66)||(41608652-41608695)
chr4 (23-66)||(46390917-46390960)
chr4 (23-66)||(47869068-47869111)
chr4 (23-66)||(52809030-52809073)
chr4 (24-66)||(23153867-23153909)
chr4 (23-61)||(23222682-23222720)
chr4 (27-61)||(34736134-34736168)
chr4 (24-66)||(38615084-38615126)
chr4 (24-66)||(41858925-41858967)
chr4 (29-61)||(14604411-14604443)
chr4 (23-59)||(26707200-26707236)
chr4 (23-51)||(30152872-30152900)
chr4 (23-63)||(32385390-32385430)
[»] chr3 (35 HSPs)
chr3 (23-66)||(21272839-21272882)
chr3 (23-66)||(32048204-32048247)
chr3 (23-66)||(1672725-1672768)
chr3 (23-66)||(5925508-5925551)
chr3 (23-66)||(33592979-33593022)
chr3 (23-66)||(33600110-33600153)
chr3 (23-66)||(35847024-35847067)
chr3 (23-66)||(46336901-46336944)
chr3 (23-66)||(49818489-49818532)
chr3 (24-66)||(4822708-4822750)
chr3 (24-66)||(39259470-39259512)
chr3 (23-59)||(53722368-53722404)
chr3 (23-66)||(1540861-1540904)
chr3 (23-66)||(6466361-6466404)
chr3 (23-62)||(23307987-23308026)
chr3 (23-66)||(23512921-23512964)
chr3 (23-66)||(27848713-27848756)
chr3 (23-66)||(29756549-29756592)
chr3 (23-66)||(33610118-33610161)
chr3 (23-66)||(36669359-36669402)
chr3 (23-66)||(37331216-37331259)
chr3 (23-66)||(38783469-38783512)
chr3 (23-66)||(45218925-45218968)
chr3 (23-66)||(51571964-51572007)
chr3 (23-66)||(51865900-51865943)
chr3 (23-62)||(54103791-54103830)
chr3 (23-61)||(335724-335762)
chr3 (23-61)||(21815819-21815857)
chr3 (23-61)||(29361361-29361399)
chr3 (24-66)||(40710540-40710582)
chr3 (23-61)||(49892996-49893034)
chr3 (23-60)||(24979040-24979077)
chr3 (23-67)||(19602382-19602426)
chr3 (26-66)||(23782279-23782319)
chr3 (26-66)||(29227198-29227238)
[»] chr2 (33 HSPs)
chr2 (23-66)||(4898008-4898051)
chr2 (23-66)||(4945402-4945445)
chr2 (23-66)||(3870967-3871010)
chr2 (23-66)||(5005050-5005093)
chr2 (23-66)||(23494653-23494696)
chr2 (23-66)||(25557055-25557098)
chr2 (23-66)||(29513578-29513621)
chr2 (23-66)||(30803639-30803682)
chr2 (23-66)||(44195774-44195817)
chr2 (23-63)||(3628416-3628456)
chr2 (23-63)||(28206438-28206478)
chr2 (23-66)||(2893774-2893817)
chr2 (23-66)||(6714097-6714140)
chr2 (23-66)||(8247165-8247208)
chr2 (23-66)||(10877515-10877558)
chr2 (23-66)||(12208166-12208209)
chr2 (23-66)||(19003116-19003159)
chr2 (23-66)||(27341615-27341658)
chr2 (23-66)||(36174166-36174209)
chr2 (23-66)||(36443724-36443767)
chr2 (23-66)||(39407987-39408030)
chr2 (23-66)||(43257300-43257343)
chr2 (23-66)||(44421787-44421830)
chr2 (23-61)||(1666791-1666829)
chr2 (23-61)||(2443312-2443350)
chr2 (23-61)||(5443694-5443732)
chr2 (28-66)||(36174396-36174434)
chr2 (26-63)||(12192621-12192658)
chr2 (25-66)||(29843689-29843730)
chr2 (23-60)||(40424994-40425031)
chr2 (23-63)||(1205123-1205163)
chr2 (23-66)||(5669036-5669077)
chr2 (26-66)||(40172096-40172136)
[»] chr1 (44 HSPs)
chr1 (26-66)||(9264814-9264854)
chr1 (23-66)||(2619373-2619416)
chr1 (23-66)||(13896391-13896434)
chr1 (23-66)||(26061689-26061732)
chr1 (23-66)||(28011278-28011321)
chr1 (23-66)||(42709886-42709929)
chr1 (23-61)||(8330351-8330389)
chr1 (23-61)||(8878973-8879011)
chr1 (23-61)||(45430216-45430254)
chr1 (24-61)||(28646361-28646398)
chr1 (23-63)||(17180883-17180923)
chr1 (23-63)||(44789479-44789519)
chr1 (23-66)||(3163384-3163427)
chr1 (23-66)||(8307997-8308040)
chr1 (23-62)||(11353771-11353810)
chr1 (23-66)||(21362657-21362700)
chr1 (23-66)||(25984586-25984629)
chr1 (23-66)||(26835039-26835082)
chr1 (23-66)||(28359671-28359714)
chr1 (23-66)||(31787280-31787323)
chr1 (23-66)||(31925094-31925137)
chr1 (23-66)||(34967358-34967401)
chr1 (23-66)||(39655566-39655609)
chr1 (23-66)||(42334285-42334328)
chr1 (23-66)||(46272772-46272815)
chr1 (23-66)||(46398810-46398853)
chr1 (23-66)||(46436309-46436352)
chr1 (23-66)||(49419389-49419432)
chr1 (23-66)||(49872710-49872753)
chr1 (23-66)||(52001036-52001079)
chr1 (23-61)||(8012481-8012519)
chr1 (24-66)||(14794947-14794989)
chr1 (23-66)||(16051673-16051718)
chr1 (23-61)||(16128577-16128615)
chr1 (23-61)||(42788067-42788105)
chr1 (24-66)||(43554849-43554891)
chr1 (23-61)||(48747445-48747483)
chr1 (23-60)||(12959327-12959364)
chr1 (25-58)||(36317798-36317831)
chr1 (23-63)||(5653518-5653558)
chr1 (26-66)||(9410908-9410948)
chr1 (23-63)||(27999831-27999871)
chr1 (23-51)||(39674228-39674256)
chr1 (26-66)||(45467083-45467123)
[»] scaffold1335 (1 HSPs)
scaffold1335 (23-66)||(1196-1239)
[»] scaffold0734 (1 HSPs)
scaffold0734 (23-66)||(6478-6521)
[»] scaffold0239 (1 HSPs)
scaffold0239 (23-66)||(1263-1306)
[»] scaffold0154 (1 HSPs)
scaffold0154 (23-66)||(4007-4050)
[»] chr5 (26 HSPs)
chr5 (23-66)||(8050599-8050642)
chr5 (23-66)||(23991903-23991946)
chr5 (23-66)||(39729588-39729631)
chr5 (26-66)||(22635565-22635605)
chr5 (23-66)||(8542971-8543014)
chr5 (23-66)||(10832623-10832666)
chr5 (23-66)||(13033230-13033273)
chr5 (23-66)||(13103203-13103246)
chr5 (23-66)||(14153524-14153567)
chr5 (23-66)||(15856512-15856555)
chr5 (23-58)||(16284849-16284884)
chr5 (23-66)||(20495648-20495691)
chr5 (23-66)||(23320321-23320364)
chr5 (23-66)||(25784558-25784601)
chr5 (23-66)||(27366261-27366304)
chr5 (23-66)||(34381849-34381892)
chr5 (23-66)||(35809254-35809297)
chr5 (23-66)||(36302722-36302765)
chr5 (23-66)||(39895827-39895870)
chr5 (23-66)||(40915441-40915484)
chr5 (24-66)||(4889975-4890017)
chr5 (26-60)||(28024784-28024818)
chr5 (23-61)||(37881465-37881503)
chr5 (26-66)||(4456607-4456647)
chr5 (23-63)||(11130362-11130402)
chr5 (26-66)||(13987760-13987800)
[»] scaffold0983 (1 HSPs)
scaffold0983 (24-66)||(1097-1139)
[»] scaffold0789 (1 HSPs)
scaffold0789 (23-66)||(3522-3565)
[»] scaffold0330 (1 HSPs)
scaffold0330 (23-66)||(13729-13772)
[»] scaffold0264 (1 HSPs)
scaffold0264 (23-66)||(18706-18749)
[»] scaffold0172 (1 HSPs)
scaffold0172 (23-66)||(18220-18263)
[»] scaffold0160 (1 HSPs)
scaffold0160 (23-66)||(25788-25831)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-66)||(151851-151894)
[»] scaffold0007 (1 HSPs)
scaffold0007 (27-66)||(3137-3176)
[»] scaffold0427 (1 HSPs)
scaffold0427 (23-61)||(5442-5480)
[»] scaffold0380 (1 HSPs)
scaffold0380 (24-66)||(16030-16072)
[»] scaffold0074 (1 HSPs)
scaffold0074 (28-66)||(45915-45953)
[»] scaffold0308 (1 HSPs)
scaffold0308 (26-66)||(20879-20919)
[»] scaffold0005 (1 HSPs)
scaffold0005 (29-61)||(212935-212967)


Alignment Details
Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 39960888 - 39960753
Alignment:
Q  87 acacaattttttgttaaatgacatggtgataaacatgaagggagttttaaatacaaacaatttaagttcgnnnnnnntaaaatactagtacctcgtactt 186  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  39960888 acacaatattttgttaaatgacatggtgataaacatgaaggaagttttaaatacaaacaatttaagttcgaaaaaaataaaatactagtacctcgtactt 39960789  T
Q  187 c-nnnnnnngaaggacagtacctcgtacttctattt 221  Q
    |        |||||||||||||||||||||||||||    
T  39960788 cttttttttgaaggacagtacctcgtacttctattt 39960753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 584446 - 584409
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaat 60  Q
    ||||||||||||||||||||||||||||||||||||||    
T  584446 cacacaatattaattgtatttcttaatatatgtgaaat 584409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 19785649 - 19785606
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  19785649 cacacaatattaattatatttcttaatatatgtgaaatgcccaa 19785606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 21849716 - 21849673
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||| ||||||| |||||||||||||||||||||||||||    
T  21849716 cacacaattttaattgcatttcttaatatatgtgaaatgtccaa 21849673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 32327912 - 32327869
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  32327912 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 32327869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 42584403 - 42584360
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  42584403 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 42584360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 31503020 - 31503062
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  31503020 acacaatattaattgcatttcttaatatgtgtgaaatgtccaa 31503062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 45823029 - 45822987
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  45823029 acacaatattaattatatttcttaatatgtgtgaaatgtccaa 45822987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 43073810 - 43073773
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaat 60  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  43073810 cacacaatattaattgtatttcttaatatgtgtgaaat 43073773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 46578824 - 46578861
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaat 60  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  46578824 cacacaatattaattgtatttcttaatatgtgtgaaat 46578861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 2887467 - 2887507
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  2887467 acaatattaattgcatttcttaatatatgtgaaatgcccaa 2887507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 2649111 - 2649154
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  2649111 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 2649154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 16875732 - 16875689
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  16875732 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 16875689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 18235096 - 18235139
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  18235096 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 18235139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 22624525 - 22624568
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  22624525 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 22624568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 22918373 - 22918416
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  22918373 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 22918416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 24302661 - 24302618
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| |||||||| |||||    
T  24302661 cacacaatattaattgcatttcttaatatgtgtgaaatatccaa 24302618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 25428391 - 25428434
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  25428391 cacacaatattaattatatttcttaatatgtgtgaaatgcccaa 25428434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 27118918 - 27118875
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  27118918 cacacaatattaattatatttcttaatatatatgaaatgcccaa 27118875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 28472139 - 28472100
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgt 62  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  28472139 cacacaatattaattacatttcttaatatatgtgaaatgt 28472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 28536702 - 28536659
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  28536702 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 28536659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 33938285 - 33938242
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  33938285 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 33938242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 35421732 - 35421689
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  35421732 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 35421689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 37411286 - 37411329
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  37411286 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 37411329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 39960946 - 39960907
Alignment:
Q  27 caatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  39960946 caatattaattatatttcttaatatgtgtgaaatgtccaa 39960907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 41821011 - 41821054
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||    
T  41821011 cacataatattaattgcatttcttaatatatgtgaaatgcccaa 41821054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 42912281 - 42912238
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  42912281 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 42912238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 46944559 - 46944516
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||    
T  46944559 cacacaatattaattatattttttaatatgtgtgaaatgtccaa 46944516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 47988274 - 47988231
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||    
T  47988274 cacacaatattaattgcattttttaatatatgtgaaatgcccaa 47988231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 22326596 - 22326558
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  22326596 cacacaatattaattgcatttcttaatatgtgtgaaatg 22326558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 25651027 - 25650985
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||  |||||||||||| ||||||||||||||    
T  25651027 acacaatattaattacatttcttaatatgtgtgaaatgtccaa 25650985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 26838043 - 26838005
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  26838043 cacacaatattaattgcatttcttaatatgtgtgaaatg 26838005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 28587146 - 28587188
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||    
T  28587146 acacaatattaattgcatttcttaatatgtgtgaaatgcccaa 28587188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 29410156 - 29410118
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  29410156 cacacaatattaattgcatttcttaatatgtgtgaaatg 29410118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 32267599 - 32267561
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  32267599 cacacaatattaattgcatttcttaatatgtgtgaaatg 32267561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 35497868 - 35497910
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||  |||||||||||| ||||||||||||||    
T  35497868 acacaatattaattacatttcttaatatgtgtgaaatgtccaa 35497910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 39983332 - 39983294
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  39983332 cacacaatattaattgcatttcttaatatgtgtgaaatg 39983294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 42259337 - 42259379
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||  |||||||||||| ||||||||||||||    
T  42259337 acacaatattaattaaatttcttaatatgtgtgaaatgtccaa 42259379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 9603729 - 9603692
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaat 60  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  9603729 cacacaatattaattatatttctcaatatatgtgaaat 9603692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 9831300 - 9831263
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaat 60  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  9831300 cacacaatattaattatatttctcaatatatgtgaaat 9831263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 39403768 - 39403727
Alignment:
Q  25 cacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  39403768 cacaatattaattacatttcttaatatgtgtgaaatgtccaa 39403727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 543643 - 543600
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  543643 cacacaatattaattgtatttcttaatatgtgtgaaatgtccaa 543600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 2031460 - 2031417
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  2031460 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 2031417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 23606394 - 23606437
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  23606394 cacacaatattaattacatttcttaatatatgtgaaatgtccaa 23606437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 29867468 - 29867511
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  29867468 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 29867511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 34356725 - 34356768
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  34356725 cacacaatattaattgcatttcttaatatatgtgaaatgcccaa 34356768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 38896529 - 38896486
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  38896529 cacacaatattaattatatttcttaatatgtgtgaaatgtccaa 38896486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 5449372 - 5449334
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  5449372 cacacaatattaattgcatttcttaatatatgtgaaatg 5449334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 17911167 - 17911205
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  17911167 cacacaatattaattatatttcttaatatatgtgaaatg 17911205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 26393889 - 26393847
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  26393889 acacaatattaattgcatttcttaatatgtgtgaaatgtccaa 26393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 11181457 - 11181497
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  11181457 acaatattaattgcatttcttaatatgtgtgaaatgtccaa 11181497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 17834111 - 17834151
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  17834111 cacacaatattaattgcatttcttaatatgtgtgaaatgtc 17834151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 19715441 - 19715481
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  19715441 acaatattaattatatttcttaatatatgtgaaatgcccaa 19715481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 44263177 - 44263141
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaa 59  Q
    |||||||||||||||| ||||||||||||||||||||    
T  44263177 cacacaatattaattgcatttcttaatatatgtgaaa 44263141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 548094 - 548051
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  548094 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 548051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 4135898 - 4135941
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  4135898 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 4135941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 9724795 - 9724838
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  9724795 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 9724838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 15595668 - 15595711
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||    
T  15595668 cacacaatattaattgcattttttaatatgtgtgaaatgtccaa 15595711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 21545467 - 21545510
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  21545467 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 21545510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 22553111 - 22553068
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||    
T  22553111 cacacattattaattgtatttcttaatatgtgtgaaatgcccaa 22553068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 26747039 - 26747082
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  26747039 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 26747082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 28719893 - 28719936
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  28719893 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 28719936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 30526368 - 30526411
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  30526368 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 30526411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 31230549 - 31230506
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  31230549 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 31230506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 31602782 - 31602739
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  31602782 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 31602739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 32629663 - 32629620
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  32629663 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 32629620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 2120327 - 2120293
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaat 60  Q
    ||||||||||||| |||||||||||||||||||||    
T  2120327 acaatattaattgcatttcttaatatatgtgaaat 2120293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 10709170 - 10709132
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  10709170 cacacaatattaattgtttttcttaatatgtgtgaaatg 10709132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 17949501 - 17949463
Alignment:
Q  28 aatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  17949501 aatattaattgtatttcttaatatgtgtgaaatgcccaa 17949463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 29342918 - 29342960
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||    
T  29342918 acacaatattaattgcattccttaatatgtgtgaaatgtccaa 29342960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 37964906 - 37964864
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||  |||||||||||||||||||||| ||||    
T  37964906 acacaatattaattacatttcttaatatatgtgaaatgcccaa 37964864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 39629053 - 39629091
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  39629053 cacacaatattaattgcatttcttaatatgtgtgaaatg 39629091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 39638603 - 39638641
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  39638603 cacacaatattaattgcatttcttaatatgtgtgaaatg 39638641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 9471021 - 9471061
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||| |||||||||||| ||||||||| ||||    
T  9471021 acaatattaattgcatttcttaatatgtgtgaaatgcccaa 9471061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 12000706 - 12000746
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  12000706 acaatattaattacatttcttaatatgtgtgaaatgtccaa 12000746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 12988052 - 12988016
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaa 59  Q
    |||||||||||||||| |||||||||||| |||||||    
T  12988052 cacacaatattaattgcatttcttaatatgtgtgaaa 12988016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 24333222 - 24333262
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  24333222 acaatattaattacatttcttaatatgtgtgaaatgtccaa 24333262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 35544060 - 35544020
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||| ||||||||||||| ||||||||| ||||    
T  35544060 acaatattaattatatttcttaatatgtgtgaaatgcccaa 35544020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 40488351 - 40488387
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgt 62  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  40488351 acaatattaattgcatttcttaatatgtgtgaaatgt 40488387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 42827557 - 42827521
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaa 59  Q
    |||||||||||||||| |||||||||||| |||||||    
T  42827557 cacacaatattaattgcatttcttaatatgtgtgaaa 42827521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 42981404 - 42981444
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  42981404 cacacaatattaattacatttcttaatatgtgtgaaatgtc 42981444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 42981502 - 42981542
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  42981502 cacacaatattaattacatttcttaatatgtgtgaaatgtc 42981542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 17275315 - 17275272
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  17275315 cacacaatattaattgtatttcttaatatgtgtgaaatgtccaa 17275272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 6335017 - 6334974
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  6335017 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 6334974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 6791843 - 6791800
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  6791843 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 6791800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 8550380 - 8550423
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  8550380 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 8550423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 10027977 - 10028020
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  10027977 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 10028020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 17442017 - 17442060
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  17442017 cacacaatattaattatatttcttaatatgtgtgaaatgtccaa 17442060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 29455553 - 29455596
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  29455553 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 29455596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 31504058 - 31504101
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  31504058 cacacaatattaattatatttcttaatatgtgtgaaatgtccaa 31504101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 1114420 - 1114377
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  1114420 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 1114377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 2603466 - 2603423
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  2603466 cacacaatattaattatatttcttaatatgtgtgaaatgcccaa 2603423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 3888773 - 3888816
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||    
T  3888773 cacacaatattaattatatttcttaatatatgtgacatgcccaa 3888816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 4981207 - 4981164
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  4981207 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 4981164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 5489793 - 5489836
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||    
T  5489793 cacaaaatattaattgcatttcttaatatgtgtgaaatgtccaa 5489836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 6612586 - 6612629
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  6612586 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 6612629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 8201671 - 8201714
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  8201671 cacacaatattaattatatttcttaatatgtgtaaaatgtccaa 8201714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 8415074 - 8415031
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  8415074 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 8415031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 9038318 - 9038275
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  9038318 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 9038275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 9461785 - 9461828
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  9461785 cacacaatattaattatatttcttaatatgtgtgaaatgaccaa 9461828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 11173443 - 11173486
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||    
T  11173443 cacacaaaattaattatatttcttaatatatgtgaaatgcccaa 11173486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 12499541 - 12499498
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  12499541 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 12499498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 12509360 - 12509403
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  12509360 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 12509403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 29344186 - 29344229
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  29344186 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 29344229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 78245 - 78207
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  78245 cacacaatattaattgcatttcttaatatgtgtgaaatg 78207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 690342 - 690304
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  690342 cacacaatattaattatatttcttaatatgtgtgaaatg 690304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 4147881 - 4147843
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  4147881 cacacaatattaattgcatttcttaatatgtgtgaaatg 4147843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 14310837 - 14310799
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  14310837 cacacaatattaattatatttcttaatatgtgtgaaatg 14310799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 20605781 - 20605823
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||    
T  20605781 acacaatattaattgcatttcttaatatgtgtgaaatgcccaa 20605823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 29901406 - 29901444
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  29901406 cacacaatattaattgcatttcttaatatgtgtgaaatg 29901444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 11000577 - 11000617
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||| |||||||||||| ||| |||||||    
T  11000577 cacacaatattaattgcatttcttaatatgtgtaaaatgtc 11000617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 19098732 - 19098772
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  19098732 acaatattaattacatttcttaatatgtgtgaaatgtccaa 19098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 26409261 - 26409301
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||||||||||||| ||||    
T  26409261 acaatattaattacatttcttaatatatgtgaaatgcccaa 26409301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 19806897 - 19806854
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  19806897 cacacaatattaattgtatttcttaatatatgtgaaatgcccaa 19806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 48510706 - 48510663
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  48510706 cacacaatattaattgtatttcttaatatgtgtgaaatgtccaa 48510663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 29976967 - 29976927
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  29976967 acaatattaattgtatttcttaatatatgtgaaatgcccaa 29976927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 27955900 - 27955857
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  27955900 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 27955857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 37390706 - 37390745
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgt 62  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37390706 cacacaatattaattatatttcttaatatatgtgaaatgt 37390745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 37730824 - 37730781
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  37730824 cacacaatattaattgcatttcttaatatatgtgaaatgcccaa 37730781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 47477043 - 47477000
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  47477043 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 47477000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 10555166 - 10555123
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  10555166 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 10555123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 15986443 - 15986400
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  15986443 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 15986400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 17609048 - 17609005
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  17609048 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 17609005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 22019301 - 22019344
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  22019301 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 22019344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 23662736 - 23662779
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||    
T  23662736 cacacaatattaattatatttcttaatataaatgaaatgtccaa 23662779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 26740287 - 26740244
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  26740287 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 26740244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 32402891 - 32402934
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  32402891 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 32402934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 35836263 - 35836306
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  35836263 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 35836306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 41608695 - 41608652
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  41608695 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 41608652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 46390917 - 46390960
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  46390917 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 46390960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 47869111 - 47869068
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  47869111 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 47869068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 52809030 - 52809073
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||| |||||||||||||||||||||||| | ||||||||||||    
T  52809030 cacataatattaattgtatttcttaatatgtatgaaatgtccaa 52809073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 23153867 - 23153909
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||    
T  23153867 acacaaaattaattatatttcttaatatgtgtgaaatgtccaa 23153909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 23222682 - 23222720
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  23222682 cacacaatattaattatatttcttaatatatgttaaatg 23222720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 34736134 - 34736168
Alignment:
Q  27 caatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||||||||||||| |||||||||    
T  34736134 caatattaattgtatttcttaatatgtgtgaaatg 34736168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 38615126 - 38615084
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||    
T  38615126 acacaatattaattgcatttcttaatatgtgtgaaatgcccaa 38615084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 41858925 - 41858967
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||  |||||||||||| ||||||||||||||    
T  41858925 acacaatattaattacatttcttaatatgtgtgaaatgtccaa 41858967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 14604411 - 14604443
Alignment:
Q  29 atattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||| |||||||||||||||||||||||    
T  14604411 atattaattatatttcttaatatatgtgaaatg 14604443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 26707236 - 26707200
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaa 59  Q
    |||||||||||||||| |||||||||||| |||||||    
T  26707236 cacacaatattaattgcatttcttaatatgtgtgaaa 26707200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 30152900 - 30152872
Alignment:
Q  23 cacacaatattaattgtatttcttaatat 51  Q
    |||||||||||||||||||||||||||||    
T  30152900 cacacaatattaattgtatttcttaatat 30152872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 32385430 - 32385390
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    ||||||| ||||||| ||||||||||||| |||||||||||    
T  32385430 cacacaaaattaattatatttcttaatatgtgtgaaatgtc 32385390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 21272839 - 21272882
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  21272839 cacacaatattaattgtatttcttaatatgtgtgaaatgtccaa 21272882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 32048204 - 32048247
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  32048204 cacacaatattaattgcatttcttaatatatgtgaaatgtccaa 32048247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 1672768 - 1672725
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  1672768 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 1672725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 5925508 - 5925551
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  5925508 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 5925551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 33593022 - 33592979
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  33593022 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 33592979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 33600153 - 33600110
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  33600153 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 33600110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 35847024 - 35847067
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  35847024 cacacaatattaattgcatttcttaatatatgtgaaatgcccaa 35847067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 46336901 - 46336944
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  46336901 cacacaatattaattgcatttcttaatatatgtgaaatgcccaa 46336944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 49818489 - 49818532
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  49818489 cacacaatattaattgcatttcttaatatatgtgaaatgcccaa 49818532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 4822750 - 4822708
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  4822750 acacaatattaattgtatttcttaatatgtgtgaaatgcccaa 4822708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 39259470 - 39259512
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  39259470 acacaatattaattgcatttcttaatatgtgtgaaatgtccaa 39259512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 53722368 - 53722404
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaa 59  Q
    ||||||||||||||||||||||||||||| |||||||    
T  53722368 cacacaatattaattgtatttcttaatatgtgtgaaa 53722404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 1540861 - 1540904
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  1540861 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 1540904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 6466404 - 6466361
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  6466404 cacacaatattaattatatttcttaatatgtgtgaaatgcccaa 6466361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 23307987 - 23308026
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgt 62  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  23307987 cacacaatattaattgcatttcttaatatgtgtgaaatgt 23308026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 23512964 - 23512921
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  23512964 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 23512921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 27848756 - 27848713
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  27848756 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 27848713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 29756592 - 29756549
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  29756592 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 29756549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 33610161 - 33610118
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  33610161 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 33610118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 36669359 - 36669402
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  36669359 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 36669402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 37331259 - 37331216
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  37331259 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 37331216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 38783512 - 38783469
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  38783512 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 38783469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 45218925 - 45218968
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  45218925 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 45218968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 51571964 - 51572007
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  51571964 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 51572007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 51865900 - 51865943
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  51865900 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 51865943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 54103830 - 54103791
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgt 62  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  54103830 cacacaatattaattacatttcttaatatatgtgaaatgt 54103791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 335762 - 335724
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  335762 cacacaatattaattgcatttcttaatatgtgtgaaatg 335724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 21815857 - 21815819
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  21815857 cacacaatattaattatatttcttaatatgtgtgaaatg 21815819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 29361399 - 29361361
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  29361399 cacacaatattaattgcatttcttaatatgtgtgaaatg 29361361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 40710582 - 40710540
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||    
T  40710582 acacaatattaattgcatttcttaatatgtgtgaaatgcccaa 40710540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 49893034 - 49892996
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  49893034 cacacaatattaattgcatttcttaatatgtgtgaaatg 49892996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 24979040 - 24979077
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaat 60  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  24979040 cacacaatattaattatatttcttaatatttgtgaaat 24979077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 19602382 - 19602426
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaat 67  Q
    |||||||||||||||  |||| ||||||| |||||||||||||||    
T  19602382 cacacaatattaattacattttttaatatgtgtgaaatgtccaat 19602426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 23782279 - 23782319
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||||||||||||| ||||    
T  23782279 acaatattaattacatttcttaatatatgtgaaatgcccaa 23782319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 29227238 - 29227198
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||||||||||||| ||||    
T  29227238 acaatattaattacatttcttaatatatgtgaaatgcccaa 29227198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 4898051 - 4898008
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  4898051 cacacaatattaattgcatttcttaatatatgtgaaatgtccaa 4898008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 4945445 - 4945402
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  4945445 cacacaatattaattgcatttcttaatatatgtgaaatgtccaa 4945402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 3870967 - 3871010
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  3870967 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 3871010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 5005093 - 5005050
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  5005093 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 5005050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 23494653 - 23494696
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  23494653 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 23494696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 25557055 - 25557098
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  25557055 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 25557098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 29513578 - 29513621
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  29513578 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 29513621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 30803639 - 30803682
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  30803639 cacacaatattaattatatttcttaatatatgtgaaatgcccaa 30803682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 44195774 - 44195817
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  44195774 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 44195817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 3628456 - 3628416
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  3628456 cacacaatattaattacatttcttaatatatgtgaaatgtc 3628416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 28206478 - 28206438
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  28206478 cacacaatattaattacatttcttaatatatgtgaaatgtc 28206438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 2893817 - 2893774
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  2893817 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 2893774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 6714097 - 6714140
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  6714097 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 6714140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 8247208 - 8247165
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  8247208 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 8247165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 10877515 - 10877558
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  10877515 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 10877558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 12208209 - 12208166
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| || |||||| ||||    
T  12208209 cacacaatattaattgtatttcttaatatgtgggaaatgcccaa 12208166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 19003116 - 19003159
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  19003116 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 19003159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 27341658 - 27341615
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  27341658 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 27341615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 36174166 - 36174209
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  36174166 cacacaatattaattatatttcttaatatgtgtgaaatggccaa 36174209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 36443724 - 36443767
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  36443724 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 36443767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 39407987 - 39408030
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  39407987 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 39408030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 43257343 - 43257300
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  43257343 cacacaatattaattatatttcttaatatgtgtgaaatgcccaa 43257300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 44421787 - 44421830
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  44421787 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 44421830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 1666829 - 1666791
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  1666829 cacacaatattaattgcatttcttaatatgtgtgaaatg 1666791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 2443350 - 2443312
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  2443350 cacacaatattaattgcattttttaatatatgtgaaatg 2443312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 5443732 - 5443694
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  5443732 cacacaatattaattgcatttcttaatatatgtaaaatg 5443694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 36174434 - 36174396
Alignment:
Q  28 aatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  36174434 aatattaattgtatttcttaatatgtatgaaatgtccaa 36174396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 12192621 - 12192658
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  12192621 acaatattaattatatttcttaatatatgttaaatgtc 12192658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 29843730 - 29843689
Alignment:
Q  25 cacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||  |||||||||||||||||||||| ||||    
T  29843730 cacaatattaattacatttcttaatatatgtgaaatgcccaa 29843689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 40425031 - 40424994
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaat 60  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  40425031 cacacaatattaattgcatttcttaatatgtgtgaaat 40424994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 1205123 - 1205163
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  1205123 cacacaatattaattacatttcttaatatttgtgaaatgtc 1205163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 5669077 - 5669036
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||  |||||||||||||||||    
T  5669077 cacacaatattaattatatttctta--atatgtgaaatgtccaa 5669036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 40172096 - 40172136
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||||||||||||| ||||    
T  40172096 acaatattaattacatttcttaatatatgtgaaatgcccaa 40172136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 9264854 - 9264814
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  9264854 acaatattaattgtatttcttaatatgtgtgaaatgtccaa 9264814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 2619416 - 2619373
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  2619416 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 2619373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 13896434 - 13896391
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  13896434 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 13896391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 26061732 - 26061689
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  26061732 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 26061689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 28011278 - 28011321
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  28011278 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 28011321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 42709886 - 42709929
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  42709886 cacacaatattaattatatttcttaatatatgtgaaatgcccaa 42709929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 8330351 - 8330389
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  8330351 cacacaatattaattgtatttcttaatatgtgtgaaatg 8330389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 8878973 - 8879011
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  8878973 cacacaatattaattgtatttcttaatatgtgtgaaatg 8879011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 45430216 - 45430254
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  45430216 cacacaatattaattgtatttcttaatatgtgtgaaatg 45430254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 28646361 - 28646398
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  28646361 acacaatattaattgcatttcttaatatatgtgaaatg 28646398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 17180883 - 17180923
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  17180883 cacacaatattaattgcatttcttaatatgtgtgaaatgtc 17180923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 44789479 - 44789519
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  44789479 cacacaatattaattacatttcttaatatatgtgaaatgtc 44789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 3163384 - 3163427
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  3163384 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 3163427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 8307997 - 8308040
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  8307997 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 8308040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 11353771 - 11353810
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgt 62  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  11353771 cacacaatattaattatatttcttaatatatatgaaatgt 11353810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 21362657 - 21362700
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  21362657 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 21362700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 25984586 - 25984629
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  25984586 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 25984629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 26835039 - 26835082
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  26835039 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 26835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 28359714 - 28359671
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  28359714 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 28359671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 31787280 - 31787323
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  31787280 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 31787323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 31925137 - 31925094
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  31925137 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 31925094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 34967401 - 34967358
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  34967401 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 34967358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 39655566 - 39655609
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  39655566 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 39655609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 42334328 - 42334285
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  42334328 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 42334285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 46272815 - 46272772
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||| ||||||||||    
T  46272815 cacacaatattaattacatttcttaatatatgtaaaatgtccaa 46272772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 46398810 - 46398853
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  46398810 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 46398853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 46436352 - 46436309
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  46436352 cacacaatattaattatatttcttaatatgtgtgaaatggccaa 46436309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 49419432 - 49419389
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  49419432 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 49419389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 49872710 - 49872753
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  49872710 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 49872753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 52001079 - 52001036
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  52001079 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 52001036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 8012519 - 8012481
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  8012519 cacacaatattaattacatttcttaatatatgtgaaatg 8012481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 14794989 - 14794947
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||  |||||||||||| ||||||||||||||    
T  14794989 acacaatattaattacatttcttaatatgtgtgaaatgtccaa 14794947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 16051718 - 16051673
Alignment:
Q  23 cacacaatattaattgtatttcttaatata--tgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||    
T  16051718 cacacaatattaattgcatttcttaatatatgtgtgaaatgtccaa 16051673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 16128615 - 16128577
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  16128615 cacacaatattaattgcatttcttaatatgtgtgaaatg 16128577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 42788067 - 42788105
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  42788067 cacacaatattaattgcatttcttaatatgtgtgaaatg 42788105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 43554891 - 43554849
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||    
T  43554891 acacaatattaattgcatttcttaatatgtgtgaaatgcccaa 43554849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 48747445 - 48747483
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  48747445 cacacaatattaattgcatttcttaatatgtgtgaaatg 48747483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 12959364 - 12959327
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaat 60  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  12959364 cacacaatattaattgcatttcttaatatgtgtgaaat 12959327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 36317798 - 36317831
Alignment:
Q  25 cacaatattaattgtatttcttaatatatgtgaa 58  Q
    ||||||||||||| ||||||||||||||||||||    
T  36317798 cacaatattaattatatttcttaatatatgtgaa 36317831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 5653558 - 5653518
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  5653558 cacacaatattaattacatttcttaatatgtgtgaaatgtc 5653518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 9410948 - 9410908
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||| ||||| ||||||| ||||||||||||||    
T  9410948 acaatattaattttattttttaatatgtgtgaaatgtccaa 9410908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 27999831 - 27999871
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||| |||||||||||| | |||||||||    
T  27999831 cacacaatattaattgcatttcttaatatgtatgaaatgtc 27999871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 39674228 - 39674256
Alignment:
Q  23 cacacaatattaattgtatttcttaatat 51  Q
    |||||||||||||||||||||||||||||    
T  39674228 cacacaatattaattgtatttcttaatat 39674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 45467123 - 45467083
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||||||||||||| ||||    
T  45467123 acaatattaattacatttcttaatatatgtgaaatgcccaa 45467083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1335 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1335
Description:

Target: scaffold1335; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 1239 - 1196
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  1239 cacacaatattaattgcatttcttaatatatgtgaaatgcccaa 1196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 6478 - 6521
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  6478 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 6521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 1306 - 1263
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  1306 cacacaatattaattgtatttcttaatatgtgtgaaatgcccaa 1263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 4050 - 4007
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  4050 cacacaatattaattatatttcttaatatatgtgaaatgcccaa 4007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 8050599 - 8050642
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  8050599 cacacaatattaattatatttcttaatatatgtgaaatgcccaa 8050642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 23991903 - 23991946
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  23991903 cacacaatattaattgcatttcttaatatgtgtgaaatgtccaa 23991946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 39729631 - 39729588
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  39729631 cacacaatattaattacatttcttaatatatgtgaaatgtccaa 39729588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 22635605 - 22635565
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  22635605 acaatattaattgcatttcttaatatgtgtgaaatgtccaa 22635565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 8542971 - 8543014
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  8542971 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 8543014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 10832666 - 10832623
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||| |||||||||||||||||||||||| |||||||| |||||    
T  10832666 cacataatattaattgtatttcttaatatgtgtgaaatatccaa 10832623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 13033230 - 13033273
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||    
T  13033230 cacacaatattaattgtgtttcttaatatgtgtgaaatgcccaa 13033273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 13103203 - 13103246
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||    
T  13103203 cacacaatattaattgtgtttcttaatatgtgtgaaatgcccaa 13103246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 14153567 - 14153524
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  14153567 cacacaatattaattatatttcttaatatgtgtgaaatgcccaa 14153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 15856512 - 15856555
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  15856512 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 15856555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 16284884 - 16284849
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaa 58  Q
    ||||||||||||||||||||||||||||| ||||||    
T  16284884 cacacaatattaattgtatttcttaatatgtgtgaa 16284849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 20495648 - 20495691
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  20495648 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 20495691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 23320364 - 23320321
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  23320364 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 23320321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 25784601 - 25784558
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  25784601 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 25784558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 27366304 - 27366261
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  27366304 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 27366261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 34381892 - 34381849
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||    
T  34381892 cacacaatattaattatatttcttaatatgtgtgaaatgcccaa 34381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 35809297 - 35809254
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  35809297 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 35809254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 36302765 - 36302722
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||    
T  36302765 cacacaatattaattgtatttcttaatatgtgttaaatgcccaa 36302722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 39895870 - 39895827
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  39895870 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 39895827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 40915484 - 40915441
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  40915484 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 40915441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 4890017 - 4889975
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||  |||||||||||||||||||||| ||||    
T  4890017 acacaatattaattacatttcttaatatatgtgaaatgcccaa 4889975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 28024784 - 28024818
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaat 60  Q
    |||||||||||||||||||||||||| ||||||||    
T  28024784 acaatattaattgtatttcttaatatgtgtgaaat 28024818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 37881503 - 37881465
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  37881503 cacacaatattaattgcatttcttaatatgtgtgaaatg 37881465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 4456607 - 4456647
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||||||||||||| ||||    
T  4456607 acaatattaattacatttcttaatatatgtgaaatgcccaa 4456647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 11130362 - 11130402
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtc 63  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  11130362 cacacaatattaattacatttcttaatatgtgtgaaatgtc 11130402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 13987760 - 13987800
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||| |||||||||||| ||||||||| ||||    
T  13987760 acaatattaattgcatttcttaatatgtgtgaaatgcccaa 13987800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 1139 - 1097
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  1139 acacaatattaattgcatttcttaatatgtgtgaaatgtccaa 1097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 3522 - 3565
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||    
T  3522 cacacaatattaattgtatttcttaatatgtatgaaatgaccaa 3565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 13772 - 13729
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  13772 cacacaatattaattacatttcttaatatatgtgaaatgcccaa 13729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 18749 - 18706
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  18749 cacacaatattaattgcatttcttaatatgtgtgaaatgcccaa 18706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 18263 - 18220
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  18263 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 18220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 25831 - 25788
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  25831 cacacaatattaattacatttcttaatatgtgtgaaatgtccaa 25788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 151851 - 151894
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||||||||||||||| || |||||| ||||    
T  151851 cacacaatattaattgtatttcttaatatgtgcgaaatgcccaa 151894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 3137 - 3176
Alignment:
Q  27 caatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  3137 caatattaattgtattttttaatatatgtgaaatgcccaa 3176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 5442 - 5480
Alignment:
Q  23 cacacaatattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  5442 cacacaatattaattatatttcttaatatgtgtgaaatg 5480  T

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Target: scaffold0380 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 16072 - 16030
Alignment:
Q  24 acacaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||    
T  16072 acacaatattaattgcatttcttaatatgtgtgaaatgcccaa 16030  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 45915 - 45953
Alignment:
Q  28 aatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  45915 aatattaattgcatttcttaatatgtgtgaaatgtccaa 45953  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 20879 - 20919
Alignment:
Q  26 acaatattaattgtatttcttaatatatgtgaaatgtccaa 66  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  20879 acaatattaattacatttcttaatatgtgtgaaatgtccaa 20919  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 212967 - 212935
Alignment:
Q  29 atattaattgtatttcttaatatatgtgaaatg 61  Q
    ||||||||| |||||||||||||||||||||||    
T  212967 atattaattatatttcttaatatatgtgaaatg 212935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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