View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19909_low_27 (Length: 275)

Name: NF19909_low_27
Description: NF19909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19909_low_27
NF19909_low_27
[»] chr5 (35 HSPs)
chr5 (1-257)||(18586134-18586382)
chr5 (22-98)||(5467974-5468051)
chr5 (23-94)||(7997166-7997238)
chr5 (23-80)||(24906316-24906373)
chr5 (22-77)||(13287417-13287472)
chr5 (182-257)||(18591745-18591820)
chr5 (22-99)||(26205755-26205833)
chr5 (23-81)||(38749577-38749635)
chr5 (22-80)||(43001786-43001844)
chr5 (28-99)||(25863196-25863268)
chr5 (16-80)||(39698521-39698585)
chr5 (23-78)||(4344729-4344784)
chr5 (22-80)||(14674255-14674313)
chr5 (22-80)||(21191071-21191129)
chr5 (22-80)||(21522736-21522794)
chr5 (22-80)||(21533302-21533360)
chr5 (22-80)||(31084309-31084367)
chr5 (23-80)||(6247609-6247666)
chr5 (35-99)||(43554520-43554585)
chr5 (131-167)||(19552474-19552510)
chr5 (22-81)||(22013400-22013459)
chr5 (27-66)||(42469212-42469251)
chr5 (36-78)||(18162055-18162097)
chr5 (22-68)||(19552570-19552616)
chr5 (27-81)||(28588688-28588742)
chr5 (22-80)||(42893346-42893404)
chr5 (36-81)||(6471903-6471948)
chr5 (29-78)||(11596472-11596521)
chr5 (23-80)||(21576760-21576817)
chr5 (22-75)||(40000555-40000608)
chr5 (23-99)||(14574045-14574121)
chr5 (28-68)||(28296320-28296360)
chr5 (22-66)||(36642791-36642835)
chr5 (28-79)||(38866445-38866497)
chr5 (35-98)||(39695995-39696059)
[»] chr8 (33 HSPs)
chr8 (22-163)||(44067502-44067644)
chr8 (16-81)||(25192361-25192426)
chr8 (22-81)||(34897071-34897130)
chr8 (22-80)||(4673440-4673498)
chr8 (22-80)||(20873055-20873113)
chr8 (22-80)||(30271306-30271364)
chr8 (16-74)||(41838144-41838202)
chr8 (16-81)||(15816143-15816208)
chr8 (23-80)||(22595981-22596038)
chr8 (111-164)||(24205749-24205802)
chr8 (19-68)||(26915267-26915316)
chr8 (31-94)||(1676707-1676771)
chr8 (22-81)||(36934656-36934715)
chr8 (22-68)||(13436991-13437037)
chr8 (131-165)||(14134784-14134818)
chr8 (22-68)||(22651962-22652008)
chr8 (22-80)||(29510319-29510377)
chr8 (36-78)||(30068045-30068087)
chr8 (22-80)||(36450769-36450827)
chr8 (23-68)||(5307048-5307092)
chr8 (108-165)||(13397613-13397670)
chr8 (21-78)||(29519180-29519237)
chr8 (28-80)||(2572071-2572123)
chr8 (44-80)||(4948660-4948696)
chr8 (17-81)||(20679409-20679473)
chr8 (44-80)||(25566849-25566885)
chr8 (22-62)||(28203968-28204008)
chr8 (22-74)||(28883899-28883951)
chr8 (22-58)||(29072504-29072540)
chr8 (24-80)||(31556985-31557040)
chr8 (39-94)||(35431140-35431196)
chr8 (21-81)||(39954293-39954353)
chr8 (43-98)||(40063958-40064014)
[»] chr7 (34 HSPs)
chr7 (22-157)||(43249979-43250115)
chr7 (22-99)||(23930205-23930283)
chr7 (28-99)||(38804550-38804622)
chr7 (22-80)||(24339628-24339686)
chr7 (22-80)||(25481888-25481946)
chr7 (22-80)||(26733290-26733348)
chr7 (22-79)||(32308106-32308163)
chr7 (35-94)||(23751899-23751959)
chr7 (21-81)||(42720904-42720964)
chr7 (19-78)||(1885556-1885615)
chr7 (19-78)||(5937438-5937497)
chr7 (22-77)||(43027487-43027542)
chr7 (115-165)||(2334329-2334379)
chr7 (22-99)||(4017789-4017867)
chr7 (41-98)||(5938477-5938535)
chr7 (37-94)||(12278836-12278894)
chr7 (22-80)||(13770677-13770735)
chr7 (131-165)||(17852085-17852119)
chr7 (22-80)||(24105664-24105722)
chr7 (22-80)||(27945027-27945085)
chr7 (1-79)||(35861929-35862007)
chr7 (25-66)||(927866-927907)
chr7 (35-99)||(7133273-7133338)
chr7 (23-80)||(7438693-7438750)
chr7 (35-68)||(13427575-13427608)
chr7 (29-82)||(29787382-29787435)
chr7 (43-99)||(29812659-29812716)
chr7 (36-77)||(44020975-44021016)
chr7 (36-99)||(17780079-17780143)
chr7 (37-81)||(18233612-18233656)
chr7 (131-163)||(26033392-26033424)
chr7 (44-80)||(26033476-26033512)
chr7 (22-78)||(30516374-30516430)
chr7 (14-78)||(38134423-38134487)
[»] chr1 (36 HSPs)
chr1 (22-165)||(22794018-22794151)
chr1 (36-165)||(42004882-42005006)
chr1 (24-165)||(20157284-20157421)
chr1 (22-81)||(398779-398838)
chr1 (23-80)||(38078676-38078733)
chr1 (35-99)||(40747768-40747833)
chr1 (36-102)||(21145466-21145534)
chr1 (22-81)||(36878447-36878506)
chr1 (26-80)||(113289-113343)
chr1 (23-99)||(6936395-6936472)
chr1 (25-81)||(1486723-1486779)
chr1 (16-80)||(1815237-1815301)
chr1 (22-81)||(5898280-5898339)
chr1 (22-81)||(13997869-13997928)
chr1 (22-81)||(16927199-16927258)
chr1 (5-80)||(29144373-29144448)
chr1 (22-76)||(2896140-2896194)
chr1 (22-80)||(6612186-6612244)
chr1 (22-68)||(9103626-9103672)
chr1 (22-165)||(15323149-15323287)
chr1 (22-80)||(22881631-22881689)
chr1 (22-80)||(31672910-31672968)
chr1 (22-80)||(46348398-46348456)
chr1 (22-80)||(47989484-47989541)
chr1 (22-80)||(48450602-48450660)
chr1 (22-82)||(9033020-9033081)
chr1 (22-87)||(16828648-16828713)
chr1 (128-165)||(18471377-18471414)
chr1 (24-81)||(19324550-19324607)
chr1 (16-80)||(16297298-16297362)
chr1 (22-78)||(17831548-17831604)
chr1 (44-80)||(18190123-18190159)
chr1 (44-80)||(24577201-24577237)
chr1 (44-80)||(40258948-40258984)
chr1 (37-77)||(42325561-42325601)
chr1 (22-58)||(48040499-48040535)
[»] scaffold0007 (1 HSPs)
scaffold0007 (22-163)||(225199-225341)
[»] chr3 (40 HSPs)
chr3 (22-94)||(24205041-24205114)
chr3 (37-99)||(12704652-12704715)
chr3 (22-99)||(41319305-41319383)
chr3 (28-94)||(15864825-15864892)
chr3 (23-80)||(4987306-4987363)
chr3 (37-97)||(21211289-21211350)
chr3 (23-78)||(20691306-20691361)
chr3 (22-99)||(21479104-21479183)
chr3 (22-81)||(25948901-25948960)
chr3 (22-80)||(10268501-10268559)
chr3 (22-80)||(20503451-20503509)
chr3 (28-165)||(25074781-25074914)
chr3 (16-81)||(23870573-23870638)
chr3 (35-99)||(52369774-52369839)
chr3 (22-97)||(25652028-25652104)
chr3 (16-80)||(26508090-26508154)
chr3 (22-66)||(39682870-39682914)
chr3 (30-77)||(3164043-3164090)
chr3 (23-78)||(10954939-10954994)
chr3 (25-80)||(28917990-28918045)
chr3 (25-80)||(47775714-47775769)
chr3 (35-81)||(7928449-7928495)
chr3 (28-93)||(8903424-8903489)
chr3 (22-80)||(15796309-15796367)
chr3 (35-77)||(16789668-16789710)
chr3 (22-80)||(34185138-34185196)
chr3 (22-68)||(40052318-40052364)
chr3 (136-165)||(13807244-13807273)
chr3 (30-79)||(14979175-14979224)
chr3 (22-79)||(21720750-21720807)
chr3 (131-168)||(21861660-21861697)
chr3 (35-80)||(49651801-49651846)
chr3 (24-60)||(10504938-10504974)
chr3 (22-82)||(15544679-15544739)
chr3 (131-167)||(18427034-18427070)
chr3 (42-78)||(21149073-21149109)
chr3 (22-82)||(25064895-25064955)
chr3 (34-78)||(34189425-34189469)
chr3 (44-99)||(34307775-34307831)
chr3 (44-80)||(34910325-34910361)
[»] chr4 (36 HSPs)
chr4 (23-99)||(20743273-20743350)
chr4 (28-98)||(24343499-24343570)
chr4 (23-94)||(16402211-16402283)
chr4 (35-83)||(32910550-32910598)
chr4 (181-248)||(32041861-32041928)
chr4 (22-80)||(21945489-21945547)
chr4 (23-77)||(34515892-34515946)
chr4 (22-80)||(30298932-30298991)
chr4 (22-80)||(30327800-30327859)
chr4 (16-74)||(11651155-11651213)
chr4 (16-99)||(20633465-20633546)
chr4 (22-75)||(7012052-7012105)
chr4 (22-99)||(20521846-20521922)
chr4 (19-68)||(43093552-43093601)
chr4 (16-80)||(16303281-16303345)
chr4 (34-97)||(31243545-31243609)
chr4 (36-80)||(37203264-37203308)
chr4 (22-81)||(15029751-15029810)
chr4 (22-81)||(22440614-22440673)
chr4 (37-80)||(29205445-29205488)
chr4 (22-81)||(40179650-40179709)
chr4 (115-165)||(3064868-3064918)
chr4 (37-98)||(3144648-3144710)
chr4 (28-78)||(5654608-5654658)
chr4 (22-80)||(23293001-23293059)
chr4 (22-80)||(27706192-27706250)
chr4 (23-91)||(19230312-19230381)
chr4 (22-99)||(34589703-34589779)
chr4 (44-81)||(54580037-54580074)
chr4 (16-80)||(4383348-4383411)
chr4 (22-62)||(5096129-5096169)
chr4 (36-99)||(6273944-6274008)
chr4 (44-80)||(11596367-11596403)
chr4 (28-68)||(15969345-15969385)
chr4 (44-80)||(28964263-28964299)
chr4 (22-78)||(37496690-37496746)
[»] chr6 (44 HSPs)
chr6 (36-98)||(34446565-34446628)
chr6 (22-97)||(6389729-6389805)
chr6 (21-80)||(5970123-5970182)
chr6 (29-94)||(12086345-12086411)
chr6 (22-80)||(12696310-12696368)
chr6 (22-80)||(16766683-16766741)
chr6 (22-99)||(17168458-17168536)
chr6 (22-66)||(10760870-10760914)
chr6 (36-80)||(28715295-28715339)
chr6 (22-81)||(7625108-7625167)
chr6 (25-80)||(7977845-7977900)
chr6 (22-81)||(13851722-13851781)
chr6 (22-80)||(17841604-17841662)
chr6 (36-92)||(12235521-12235578)
chr6 (24-81)||(17341678-17341735)
chr6 (23-80)||(31959146-31959203)
chr6 (16-65)||(33303639-33303688)
chr6 (29-77)||(17168887-17168935)
chr6 (25-81)||(19040341-19040397)
chr6 (19-166)||(26247409-26247551)
chr6 (22-81)||(7265607-7265666)
chr6 (22-81)||(7938102-7938161)
chr6 (22-81)||(9658865-9658924)
chr6 (22-81)||(16388247-16388305)
chr6 (22-68)||(426541-426587)
chr6 (22-80)||(8776988-8777046)
chr6 (22-80)||(9107385-9107443)
chr6 (22-80)||(10770689-10770747)
chr6 (22-68)||(13211308-13211354)
chr6 (22-80)||(16833294-16833352)
chr6 (22-80)||(17435185-17435243)
chr6 (22-80)||(34595120-34595178)
chr6 (23-81)||(1532225-1532285)
chr6 (24-61)||(6908082-6908119)
chr6 (28-80)||(8713971-8714024)
chr6 (21-78)||(10842517-10842574)
chr6 (23-68)||(17422282-17422327)
chr6 (19-68)||(28503170-28503219)
chr6 (19-68)||(29815575-29815624)
chr6 (44-93)||(34225812-34225860)
chr6 (37-81)||(7569182-7569226)
chr6 (22-82)||(8805585-8805645)
chr6 (27-165)||(9629374-9629513)
chr6 (44-80)||(31384928-31384964)
[»] chr2 (39 HSPs)
chr2 (22-80)||(30404865-30404923)
chr2 (35-99)||(11307999-11308063)
chr2 (28-99)||(19573970-19574042)
chr2 (35-98)||(25544480-25544544)
chr2 (35-98)||(30563408-30563472)
chr2 (23-82)||(21782831-21782890)
chr2 (22-81)||(36756358-36756417)
chr2 (22-80)||(20539689-20539747)
chr2 (22-80)||(21374714-21374772)
chr2 (19-81)||(28677892-28677954)
chr2 (28-78)||(30298464-30298514)
chr2 (22-99)||(37986765-37986843)
chr2 (22-80)||(39323250-39323308)
chr2 (35-166)||(10535684-10535819)
chr2 (44-81)||(12668437-12668474)
chr2 (36-99)||(23354647-23354711)
chr2 (22-82)||(28412336-28412396)
chr2 (18-78)||(43586022-43586082)
chr2 (25-80)||(4882711-4882766)
chr2 (22-81)||(16069268-16069327)
chr2 (22-81)||(21616748-21616807)
chr2 (33-68)||(25317134-25317169)
chr2 (22-80)||(12940950-12941008)
chr2 (22-80)||(15972859-15972917)
chr2 (22-80)||(24894375-24894433)
chr2 (22-79)||(27460012-27460070)
chr2 (22-80)||(37419729-37419787)
chr2 (22-80)||(37558963-37559021)
chr2 (22-80)||(38117174-38117232)
chr2 (22-94)||(12748670-12748743)
chr2 (16-81)||(23921233-23921298)
chr2 (42-98)||(24011042-24011099)
chr2 (25-58)||(41047863-41047896)
chr2 (131-164)||(44860416-44860449)
chr2 (22-54)||(11977704-11977736)
chr2 (44-80)||(30335425-30335461)
chr2 (44-80)||(30717545-30717581)
chr2 (21-81)||(31808062-31808122)
chr2 (117-165)||(34006930-34006978)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-77)||(8071-8147)
[»] scaffold0103 (1 HSPs)
scaffold0103 (22-80)||(51797-51855)
[»] scaffold0066 (1 HSPs)
scaffold0066 (28-98)||(33360-33430)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-80)||(92787-92851)
[»] scaffold0050 (1 HSPs)
scaffold0050 (22-81)||(70264-70323)
[»] scaffold0223 (1 HSPs)
scaffold0223 (22-80)||(20158-20216)
[»] scaffold0027 (1 HSPs)
scaffold0027 (22-80)||(46668-46726)
[»] scaffold0199 (1 HSPs)
scaffold0199 (31-94)||(1944-2008)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-80)||(192264-192328)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-82)||(241580-241640)
[»] scaffold0722 (1 HSPs)
scaffold0722 (17-68)||(7059-7110)
[»] scaffold0171 (1 HSPs)
scaffold0171 (22-81)||(23406-23465)
[»] scaffold0652 (1 HSPs)
scaffold0652 (22-80)||(477-535)
[»] scaffold0136 (1 HSPs)
scaffold0136 (22-80)||(3864-3922)
[»] scaffold0361 (1 HSPs)
scaffold0361 (44-80)||(14538-14574)
[»] scaffold0122 (1 HSPs)
scaffold0122 (44-80)||(8018-8054)
[»] scaffold0024 (1 HSPs)
scaffold0024 (22-78)||(18125-18181)


Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 18586382 - 18586134
Alignment:
Q  1 accggatacgacatagatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcggtgtcgt 100  Q
    |||||| | |||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| |          |||||||    
T  18586382 accggaaatgacatagacactgacactgacatgtcgatacggataataatttgaaaaa-tgacataatacagtgtaattatag----------gtgtcgt 18586294  T
Q  101 gtccgatactaacgcatgtctgactctgaaacacacctaattcgaggagtgtccgtgtttcatagaattaccgaaggactat---acttacatcaatttg 197  Q
    |||||| ||| ||||||||| ||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||    |||||||||||| ||    
T  18586293 gtccgagactgacgcatgtccgactctggaacacacctaattcgaggagtgtccgtgcttcaaagaattagcgaaggactacttaacttacatcaatgtg 18586194  T
Q  198 acctttctttgcaattttggaccaatcctttgctgccacaccagttttccacacaaaatc 257  Q
    || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18586193 acttttctttgcaattttggaccaatccttggctgccacaccagttttccacacaaaatc 18586134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 5468051 - 5467974
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    |||||||||||||| | || ||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||||    
T  5468051 gacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaattataggtgtcgtgtcggtgtc 5467974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 7997238 - 7997166
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    ||||||||||| | |||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||    
T  7997238 acactgacacgccaacacggataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtcgg 7997166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 24906373 - 24906316
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||| | |||| ||||||||||||||||||||||||||| |||||||||||    
T  24906373 acactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaatta 24906316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 13287472 - 13287417
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  13287472 gacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaa 13287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 18591820 - 18591745
Alignment:
Q  182 tacttacatcaatttgacctttctttgcaattttggaccaatcctttgctgccacaccagttttccacacaaaatc 257  Q
    ||||||||||||| | || ||||||||||||||||| ||||||||| ||   |||||||||||||||| |||||||    
T  18591820 tacttacatcaatgttacttttctttgcaattttgggccaatccttggcattcacaccagttttccactcaaaatc 18591745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 26205833 - 26205755
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||||||||||||| || ||||| | ||||| ||||||||||||| ||||||||| || |||||||||| |||||||    
T  26205833 gacactgacacgtcgataccgataaaattttgagaaaatgacataattcagtgtaatcataggtgtcgtgttggtgtcg 26205755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 38749635 - 38749577
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||| || |||||||||    
T  38749635 acacggacatgtcgacaccgataataatttgaaaaaatgacataattcaatgtaattat 38749577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 43001786 - 43001844
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||| |||||||| | ||||||||||||||||| ||||||| |||||||||||    
T  43001786 gacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaatta 43001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 25863196 - 25863268
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||||||||| | |||||||||||| ||||||| ||||| ||||||||||||  |||||||||| ||||||    
T  25863196 gacacgtcgacatgtataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtcagtgtcg 25863268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 39698521 - 39698585
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||||| ||||||| |||||||||||    
T  39698521 gatacggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 4344729 - 4344784
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||||| |||||||||    
T  4344729 acactaacacgctgacaccgataataatttgaaaaaatgacataattcagtgtaat 4344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 14674255 - 14674313
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||  ||||||||||    
T  14674255 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 21191129 - 21191071
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||| | |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  21191129 gacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 21522736 - 21522794
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||| ||||||| ||||||| |||||||||||    
T  21522736 gacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatta 21522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 21533302 - 21533360
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||| ||||||| ||||||| |||||||||||    
T  21533302 gacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatta 21533360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 31084309 - 31084367
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| ||||||| || ||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaatta 31084367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 6247609 - 6247666
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||| ||||||   ||||||||||||||||| ||||||| |||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 43554520 - 43554585
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||||| |||||||||||| ||||||| |||||  |||||||| || ||||||||||||||||||    
T  43554520 cgacacgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcg 43554585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 19552510 - 19552474
Alignment:
Q  131 acacacctaattcgaggagtgtccgtgtttcatagaa 167  Q
    ||||||||||| |||||||||||||||||||||||||    
T  19552510 acacacctaatccgaggagtgtccgtgtttcatagaa 19552474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 22013400 - 22013459
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| |||||| | |||||||||| |||||| |||||||  |||||||||||    
T  22013400 gacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattat 22013459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 42469212 - 42469251
Alignment:
Q  27 tgacacgtcgacacggataataatttgaaaaaatgacata 66  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  42469212 tgacacgccgacacggataataatttgagaaaatgacata 42469251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 18162055 - 18162097
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||||||||||| | ||||||||||||| |||||||||    
T  18162055 gacacggataataatttaagaaaatgacataattcagtgtaat 18162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 19552616 - 19552570
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||    
T  19552616 gacactgacacgccgacacagttaataatttgaaaaaatcacataat 19552570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 28588742 - 28588688
Alignment:
Q  27 tgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||| |||||| | ||||||||||| ||||| ||||||| ||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattat 28588688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 42893346 - 42893404
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| |||||  |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  42893346 gacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaatta 42893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 6471948 - 6471903
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||| ||||||||||| ||||| ||||||| ||||||||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagtgtaattat 6471903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 11596521 - 11596472
Alignment:
Q  29 acacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||| || ||||||||||||| ||||||||||||| || ||||||    
T  11596521 acacgtcgataccgataataatttgagaaaatgacataattcaatgtaat 11596472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 21576817 - 21576760
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||| ||| | |||| | ||||||||||||||||| ||||||| |||||||||||    
T  21576817 acactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaatta 21576760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 40000608 - 40000555
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgt 75  Q
    |||||||||| ||||||||   ||||||||||||||||| ||||||| ||||||    
T  40000608 gacactgacatgtcgacactcttaataatttgaaaaaatcacataattcagtgt 40000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 14574121 - 14574045
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcggtgtcg 99  Q
    |||| |||||| |||||||  |||||||||||  |||||| ||||| |||||||||||| |  ||||||| ||||||    
T  14574121 acaccgacacgccgacacgagtaataatttgatgaaatgatataattcagtgtaattataggttcgtgtcagtgtcg 14574045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 28296320 - 28296360
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||| |||||||| ||||||||||||| |||||||||||||    
T  28296320 gacaagtcgacaccgataataatttgagaaaatgacataat 28296360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 36642835 - 36642791
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacata 66  Q
    |||||||||||| |||||| | ||||||||||||||| |||||||    
T  36642835 gacactgacacgccgacacagttaataatttgaaaaagtgacata 36642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 38866445 - 38866497
Alignment:
Q  28 gacacgtcgacacggataataatttg-aaaaaatgacataatacagtgtaatt 79  Q
    ||||||||||||| ||||||| |||| ||||||||||||||| || |||||||    
T  38866445 gacacgtcgacaccgataatattttgaaaaaaatgacataattcaatgtaatt 38866497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 39696059 - 39695995
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    |||||| || |||||||||| ||||||| |||||  |||||||| || |||||||||||||||||    
T  39696059 cgacaccgacaataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtc 39695995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 44067502 - 44067644
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcgtgtccgatactaacgcatgtc 120  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| || ||| | || ||||    
T  44067502 gacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcgtgtcggacactgatgcgtgtc 44067601  T
Q  121 tgactctgaaacacacctaattcgaggagtgtccgtgtttcat 163  Q
     ||| |    |||| |||||||||||||||||||||| |||||    
T  44067602 cgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 25192426 - 25192361
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||| |||||||||||| |||||| | ||||||||||||||| ||||||||| |||| |||||||    
T  25192426 gatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattat 25192361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 34897071 - 34897130
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||| ||||||||||||| | ||||||||||| ||||| ||||||| ||||||||||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattat 34897130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 4673498 - 4673440
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| ||||||||||||||||||| | | ||| |||||||||||    
T  4673498 gacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaatta 4673440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 20873055 - 20873113
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||  ||||||||||||||||||| |||||||  ||||||||||    
T  20873055 gacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 30271364 - 30271306
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | |||| |||||||||||| ||||||| |||||||||||    
T  30271364 gacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaatta 30271306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 41838202 - 41838144
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtg 74  Q
    ||||| ||||||||||||||||||| | ||||||||| ||||||| ||||||| |||||    
T  41838202 gatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 15816208 - 15816143
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||| |||||||||||| ||||||   ||||||||||||||||| |||||||  |||||||||||    
T  15816208 gatacggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattat 15816143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 22595981 - 22596038
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||| |||||| | ||||||||| ||||||| ||||||| |||||||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaatta 22596038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 24205802 - 24205749
Alignment:
Q  111 aacgcatgtctgactctgaaacacacctaattcgaggagtgtccgtgtttcata 164  Q
    |||||||||||||| | | ||||| |||||| ||||||||||||||||||||||    
T  24205802 aacgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 26915316 - 26915267
Alignment:
Q  19 actgacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||||||| ||||||||||||||||||| | ||||| |||||||||||||    
T  26915316 actgacacggacacgtcgacacggataaaattttgagaaaatgacataat 26915267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 1676707 - 1676771
Alignment:
Q  31 acgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    |||||||||||||||||||||||  ||||||||||| |  |||||||| || |||||||||||||    
T  1676707 acgtcgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 1676771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 36934656 - 36934715
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||| |||||||||||| | |||||||| |||||||| ||||||| || |||||||||    
T  36934656 gacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattat 36934715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 13437037 - 13436991
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||    
T  13437037 gacactgacacgccgacacagctaataatttgaaaaaatcacataat 13436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 14134784 - 14134818
Alignment:
Q  131 acacacctaattcgaggagtgtccgtgtttcatag 165  Q
    |||| ||||||||||||||||||||||||||||||    
T  14134784 acacgcctaattcgaggagtgtccgtgtttcatag 14134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 22651962 - 22652008
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||    
T  22651962 gacactgacacgccgacacagctaataatttgaaaaaatcacataat 22652008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 29510377 - 29510319
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| ||| ||| |||| ||||||    
T  29510377 gacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataatta 29510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 30068087 - 30068045
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||    
T  30068087 gacacggataataatttgagaaaatgacataattcagtataat 30068045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 36450827 - 36450769
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||||   ||||||||||||||||| ||| ||| |||||||||||    
T  36450827 gacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 5307048 - 5307092
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||    
T  5307048 acacggacacgtcgacactgataataatttg-aaaaatgacataat 5307092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 13397613 - 13397670
Alignment:
Q  108 actaacgcatgtctgactctgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    ||||||||||||| ||| | || |||| |||||||| ||||||||||||| |||||||    
T  13397613 actaacgcatgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 29519180 - 29519237
Alignment:
Q  21 tgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||||||||| |||| ||||||||||| ||||||| | ||||| || ||||||    
T  29519180 tgacactgacacgtcaacaccgataataattttaaaaaatcatataattcaatgtaat 29519237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 2572123 - 2572071
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||||   ||||||||||||||||| |||||||  ||||||||||    
T  2572123 gacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaatta 2572071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 4948660 - 4948696
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  4948660 taataatttgaaaaaatcacataattcagtgtaatta 4948696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 20679473 - 20679409
Alignment:
Q  17 atactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||| |||||||||| ||||||||   ||||||||||| ||||| ||||| | ||||||||||||    
T  20679473 atacagacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattat 20679409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 25566849 - 25566885
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  25566849 taataatttgaaaaaatcacataattcagtgtaatta 25566885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 28204008 - 28203968
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatga 62  Q
    |||||| |||||||||||| |||| ||||||||||||||||    
T  28204008 gacactaacacgtcgacactgatagtaatttgaaaaaatga 28203968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 28883951 - 28883899
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtg 74  Q
    |||||||||| | || |||| |||||||||||| ||||||||||||| |||||    
T  28883951 gacactgacatgccgccacgaataataatttgagaaaatgacataattcagtg 28883899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29072540 - 29072504
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaa 58  Q
    |||||| |||||||||||| |||||||||||||||||    
T  29072540 gacactcacacgtcgacaccgataataatttgaaaaa 29072504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 31556985 - 31557040
Alignment:
Q  24 cactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||| |||||| | |||||||||| |||||| ||||||| |||||||||||    
T  31556985 cactgacacgccgacacagttaataatttg-aaaaatcacataattcagtgtaatta 31557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 35431196 - 35431140
Alignment:
Q  39 acggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    |||||||||||||||| ||||||||||| |  |||||||| || |||||||||||||    
T  35431196 acggataataatttgagaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 35431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 39954353 - 39954293
Alignment:
Q  21 tgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||| |||||| |||||| | ||||||||||| ||||| |||||||  |||||||||||    
T  39954353 tgacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattat 39954293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 40063958 - 40064014
Alignment:
Q  43 ataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    |||||||||||| ||||||||||||| || |||||| || || ||||||||||||||    
T  40063958 ataataatttgagaaaatgacataattcattgtaatcataggcgtcgtgtcggtgtc 40064014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 43249979 - 43250115
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcgtgtccgatactaacgcatgtc 120  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||| || ||| |||| ||||    
T  43249979 gacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcgcgtcggacactgacgcgtgtc 43250078  T
Q  121 tgactctgaaacacacctaattcgaggagtgtccgtg 157  Q
     ||| |    |||| ||||||||||||||||||||||    
T  43250079 cgacaccaggacacgcctaattcgaggagtgtccgtg 43250115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 23930205 - 23930283
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||| |||||| |||||||||||| |||||||| ||||||||||||| ||||||||| || ||||| ||||||||||||    
T  23930205 gacattgacacatcgacacggatagtaatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcg 23930283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 38804622 - 38804550
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||| |||||||||||||||||| | ||||||||||||| ||| ||||| || |||||||||| |||||||    
T  38804622 gacacgccgacacggataataatttcagaaaatgacataatccagggtaatcataggtgtcgtgttggtgtcg 38804550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 24339628 - 24339686
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  24339628 gacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 24339686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 25481888 - 25481946
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  25481888 gacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 26733290 - 26733348
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||||| |||| ||||||    
T  26733290 gacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatta 26733348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 32308106 - 32308163
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatt 79  Q
    |||||||||||| |||||| | ||||||||||| ||||| ||||||| ||||||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 23751899 - 23751959
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    |||||||||||||||||||| ||||||| |||||  |||||||| || |||||||||||||    
T  23751899 cgacacggataataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtcgg 23751959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 42720964 - 42720904
Alignment:
Q  21 tgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||||| ||||| | ||||||||||||||||| |||||||  | |||||||||    
T  42720964 tgacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattat 42720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 1885556 - 1885615
Alignment:
Q  19 actgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||| || ||||| ||||||||||||| | ||||||||||||||||||| || ||||||    
T  1885556 actgatacggacacatcgacacggataaaattttgaaaaaatgacataattcaatgtaat 1885615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 5937497 - 5937438
Alignment:
Q  19 actgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    |||||||| |||||||| |||||||||| | ||||| ||||||||||||| || ||||||    
T  5937497 actgacacagacacgtcaacacggataaaattttgagaaaatgacataattcaatgtaat 5937438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 43027542 - 43027487
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    |||||||||||| |||| | | ||||||||||||||||| ||||||| ||||||||    
T  43027542 gacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaa 43027487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 2334329 - 2334379
Alignment:
Q  115 catgtctgactctgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    |||||| ||| |||||||||  ||||| |||||||||||||||||||||||    
T  2334329 catgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 4017867 - 4017789
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||| |||||| |||||||||||||||||||| |||| || |||||  |||||||| ||  ||||||||| |||||||    
T  4017867 gacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtcgtgttggtgtcg 4017789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 5938477 - 5938535
Alignment:
Q  41 ggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    |||||||||||||| ||||| ||||||| |||| ||||||| ||||| |||||||||||    
T  5938477 ggataataatttgataaaataacataattcagtataattataggtgttgtgtcggtgtc 5938535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 12278836 - 12278894
Alignment:
Q  37 acacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    |||| ||||||||||| | ||||||||||||| ||||||||||||  ||||||||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgtcgtgtcgg 12278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 13770677 - 13770735
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||| ||| |||||| | ||||||||| ||||||| ||||||| |||||||||||    
T  13770677 gacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaatta 13770735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 17852085 - 17852119
Alignment:
Q  131 acacacctaattcgaggagtgtccgtgtttcatag 165  Q
    ||||||||||||||||||||||||||| |||||||    
T  17852085 acacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 24105664 - 24105722
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | |||||||||||||||||  ||| || |||||||||||    
T  24105664 gacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaatta 24105722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 27945027 - 27945085
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||||   ||||||||||| ||||| ||||||| |||||||||||    
T  27945027 gacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaatta 27945085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35861929 - 35862007
Alignment:
Q  1 accggatacgacatagatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatt 79  Q
    |||||| |||||| ||| ||| ||||| ||||| ||||||   ||||||||||||||||| ||||||| || |||||||    
T  35861929 accggacacgacacagacactaacactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaatt 35862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 927907 - 927866
Alignment:
Q  25 actgacacgtcgacacggataataatttgaaaaaatgacata 66  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  927907 actgacacgtcgacactaataataatttgagaaaatgacata 927866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 7133338 - 7133273
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||| ||| ||||||||| ||||||||||||| ||||||||| || ||||  ||||||||||||    
T  7133338 cgacacagatgataatttgagaaaatgacataattcagtgtaatcataggtggtgtgtcggtgtcg 7133273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 7438693 - 7438750
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||| | |||||| | ||||||||||||||||| ||||||| || ||||||||    
T  7438693 acactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaatta 7438750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 13427575 - 13427608
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataat 68  Q
    ||||||||| ||||||||||||||||||||||||    
T  13427575 cgacacggaaaataatttgaaaaaatgacataat 13427608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 29787435 - 29787382
Alignment:
Q  29 acacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatg 82  Q
    ||||| |||||| | ||||||||||| ||||| ||||||| |||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatg 29787382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 29812716 - 29812659
Alignment:
Q  43 ataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||||||||| ||||||| |||||  |||||||| || ||||||||||||||||||    
T  29812716 ataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcg 29812659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 44020975 - 44021016
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    ||||||||||||||||||||||||| ||||||| || |||||    
T  44020975 gacacggataataatttgaaaaaattacataattcaatgtaa 44021016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 17780143 - 17780079
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||| |||||||||||| | ||||||||||||| |  |||||| || ||||||||||||||||||    
T  17780143 gacatggataataatttaagaaaatgacataattctatgtaataataggtgtcgtgtcggtgtcg 17780079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 18233656 - 18233612
Alignment:
Q  37 acacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||| |||| |||||||| ||||||||||||| ||||||||||||    
T  18233656 acacagatagtaatttgagaaaatgacataattcagtgtaattat 18233612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 26033424 - 26033392
Alignment:
Q  131 acacacctaattcgaggagtgtccgtgtttcat 163  Q
    ||||||||||| |||||||||||||||||||||    
T  26033424 acacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 26033512 - 26033476
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  26033512 taataatttgaaaaaatcacataattcagtgtaatta 26033476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 30516430 - 30516374
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    |||||||||||||||||||  | |||||||||| ||||||| ||||| || ||||||    
T  30516430 gacactgacacgtcgacactaacaataatttgagaaaatgatataattcaatgtaat 30516374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 38134487 - 38134423
Alignment:
Q  14 tagatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||| ||||  |||| || ||||| ||||||||||||| ||||||||||||| || ||||||    
T  38134487 tagatacggacatggacatgttgacaccgataataatttgagaaaatgacataattcaatgtaat 38134423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 22794151 - 22794018
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcggtgtcgtgtccgatactaacgcatgtct 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||          | |||||||||||||| ||| |||||||||     
T  22794151 gacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaatta----------taggtgtcgtgtccgacactgacgcatgtcc 22794062  T
Q  122 gactctgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    ||||| |  |||||||||||||||||||||| |||| |||||||    
T  22794061 gactccgggacacacctaattcgaggagtgtacgtgcttcatag 22794018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 42005006 - 42004882
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcgtgtccgatactaacgcatgtctgactctgaaacac 134  Q
    ||||||||||||||||||| |||||||||||||  |||||||| || ||||| ||||||||||||     || ||  ||||||||| ||| || ||||||    
T  42005006 gacacggataataatttgagaaaatgacataatttagtgtaatcataggtgttgtgtcggtgtcg-----gacaccgacgcatgtccgacact-aaacac 42004913  T
Q  135 acctaattcgaggagtgtccgtgtttcatag 165  Q
     |||||||||| ||||||||||| |||||||    
T  42004912 gcctaattcgaagagtgtccgtgcttcatag 42004882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 20157421 - 20157284
Alignment:
Q  24 cactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcggtgtcgtgtccgatactaacgcatgtctga 123  Q
    ||||||||| ||||||| | ||||||| ||| ||||| ||||||| ||||||||| ||      ||||||||||||||||||| ||  |||| |||| ||    
T  20157421 cactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatat----gtgtcggtgtcgtgtccgacaccgacgcgtgtccga 20157326  T
Q  124 ctctgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    | | || |||||||||||| ||||||| |||||| |||||||    
T  20157325 caccgagacacacctaatttgaggagtatccgtgcttcatag 20157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 398838 - 398779
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| |||||| | ||||||||||||||||| ||||||| ||||||||||||    
T  398838 gacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattat 398779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 38078733 - 38078676
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||| || ||||||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 40747833 - 40747768
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||| |||||| ||| |||||||    
T  40747833 cgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtcatgttggtgtcg 40747768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 21145466 - 21145534
Alignment:
Q  36 gacacggataataatttg-aaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcgtgt 102  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| || || |||||||||||| |||||    
T  21145466 gacacggataataatttgaaaaaaatgacataattcagtgtaatcataggcgtcgtgtcggtgacgtgt 21145534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 36878447 - 36878506
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| |||||| | ||||||||||| ||||| ||||||| ||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 36878506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 113289 - 113343
Alignment:
Q  26 ctgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 6936472 - 6936395
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||| |||| || |||||||||||||| ||| |||||||||||||  |||||||| || ||||||||||| ||||||    
T  6936472 acactaacacatcaacacggataataatctgagaaaatgacataattaagtgtaatcataggtgtcgtgtctgtgtcg 6936395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 1486779 - 1486723
Alignment:
Q  25 actgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||  ||||| | ||||||||||||||||| ||||||| ||||||||||||    
T  1486779 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattat 1486723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 1815237 - 1815301
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| |||||||||||| ||||||  ||||| |||| ||||||| ||||||| |||||||||||    
T  1815237 gatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaatta 1815301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 5898339 - 5898280
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||| ||| |||||| | ||||||| ||||||||| ||||||| ||||||||||||    
T  5898339 gacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattat 5898280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 13997869 - 13997928
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| |||||| | |||| |||| ||||||| ||||||| ||||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattat 13997928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 16927258 - 16927199
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||||||| ||  | ||||||||||||||||| | ||||| ||||||||||||    
T  16927258 gacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattat 16927199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 29144448 - 29144373
Alignment:
Q  5 gatacgacatagatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||  || ||||||||||| ||| |||||| | ||||||||||||||||  | ||||| |||||||||||    
T  29144448 gatacgacacggacactgacactgatacgccgacacagctaataatttgaaaaaaatagataatgcagtgtaatta 29144373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 2896194 - 2896140
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgta 76  Q
    |||||||||||| |||||| | ||||||||||| ||||| ||||||| |||||||    
T  2896194 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 6612244 - 6612186
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| ||| || | ||||||||||||||||| ||||||| |||||||||||    
T  6612244 gacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaatta 6612186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 9103626 - 9103672
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||    
T  9103626 gacactgacacgccgacacagttaataatttgaaaaaatcacataat 9103672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 15323149 - 15323287
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcggtgtcgtgtccgatactaacgcatgtct 121  Q
    |||||||||| ||||| || | ||||||||||||||||| |||||||  ||||||||| |      ||||| || ||||||  |||| | || | ||||     
T  15323149 gacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaattgt----aagtgtctgtatcgtgttggata-tgacacgtgtcc 15323243  T
Q  122 gactctgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    ||| | |||||||||||||| ||||||||||| |||||||||||    
T  15323244 gacaccgaaacacacctaatccgaggagtgtcagtgtttcatag 15323287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 22881689 - 22881631
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||||   ||||||||||||||||| |||||||  ||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 31672968 - 31672910
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||  |||||| | ||||||||||||||||| || |||| |||||||||||    
T  31672968 gacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaatta 31672910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 46348456 - 46348398
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| | |||||  ||||||||||    
T  46348456 gacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 46348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 47989484 - 47989541
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||||  |||||||||| ||||||| ||||||| |||||||||||    
T  47989484 gacactgacacgccgacaca-ataataatttaaaaaaatcacataattcagtgtaatta 47989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 48450660 - 48450602
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| | |||| | ||||||||||||||||| |||||||  ||||||||||    
T  48450660 gacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaatta 48450602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 9033081 - 9033020
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaa-aaaatgacataatacagtgtaattatg 82  Q
    |||||||||||||| ||||   |||||||||||| ||||| ||||||| |||||||||||||    
T  9033081 gacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaattatg 9033020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 16828713 - 16828648
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtc 87  Q
    |||||| ||| || ||||| |||||||||||||  |||||||||||| ||| ||||| ||||||||    
T  16828713 gacactaacatgttgacactgataataatttgatgaaatgacataattcagcgtaatcatggtgtc 16828648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 18471377 - 18471414
Alignment:
Q  128 gaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    |||||||||||||||||||||||||||||  |||||||    
T  18471377 gaaacacacctaattcgaggagtgtccgtacttcatag 18471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 19324550 - 19324607
Alignment:
Q  24 cactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||| |||||||||| | | ||||||||| ||||| ||||||| ||||||||||||    
T  19324550 cactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaattat 19324607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 16297362 - 16297298
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| || |||||||||||||||| |  |||||| ||||||||| ||| ||| |||||||||||    
T  16297362 gatacggatactgacacgtcgacacagcaaataatatgaaaaaatcacaaaattcagtgtaatta 16297298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 17831604 - 17831548
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    |||||||||||| |||||| | ||||||||||| ||||| |||| || |||||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaat 17831548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 18190159 - 18190123
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaatta 18190123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 24577237 - 24577201
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  24577237 taataatttgaaaaaatcacataattcagtgtaatta 24577201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 40258984 - 40258948
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaatta 40258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 42325561 - 42325601
Alignment:
Q  37 acacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    |||| ||||||||||||| ||||||||||||| ||||||||    
T  42325561 acaccgataataatttgagaaaatgacataattcagtgtaa 42325601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 48040535 - 48040499
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaa 58  Q
    |||||||||||| |||||| |||||||||||||||||    
T  48040535 gacactgacacgccgacacagataataatttgaaaaa 48040499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 225341 - 225199
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcgtgtccgatactaacgcatgtc 120  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||| ||||||||||| || ||| |||| |||     
T  225341 gacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgtcgtgtcggacactgacgcgtgtt 225242  T
Q  121 tgactctgaaacacacctaattcgaggagtgtccgtgtttcat 163  Q
     ||| |    |||| |||||||||||||||||||||| |||||    
T  225241 cgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 24205114 - 24205041
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  24205114 gacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcgg 24205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 12704715 - 12704652
Alignment:
Q  37 acacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||||||||||||||||||||||||||||| || |||||| || ||||||||||||||||||    
T  12704715 acacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtcggtgtcg 12704652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 41319383 - 41319305
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||| || ||||||| |  |||||||||||||||||    
T  41319383 gacacggacacgtcgacaccaataataatttgaaaaaatgacataattcaatgtaattgtatgtgtcgtgtcggtgtcg 41319305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 15864825 - 15864892
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    |||||| |||||||||||||||||||||||||||| |||||  |||||||| || |||||||||||||    
T  15864825 gacacgccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgtcgtgtcgg 15864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 4987363 - 4987306
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 21211289 - 21211350
Alignment:
Q  37 acacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgt 97  Q
    |||||||||||||||||| ||||| ||||| | |||||||||||| ||||||||||||||||    
T  21211289 acacggataataatttgagaaaattacatagttcagtgtaattatgggtgtcgtgtcggtgt 21211350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 20691306 - 20691361
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    |||||||||||| || || ||||||||||||| ||||||||||||| |||||||||    
T  20691306 acactgacacgtagaaactgataataatttgagaaaatgacataattcagtgtaat 20691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 21479104 - 21479183
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta-tggtgtc-gtgtcggtgtcg 99  Q
    |||||||||||| |||||| | ||||||||||||||||| ||| ||| ||||||||||| | ||||| ||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcggtgtcg 21479183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 25948960 - 25948901
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||| | ||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  25948960 gacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattat 25948901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 10268559 - 10268501
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||  ||||||||||    
T  10268559 gacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 20503451 - 20503509
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaatta 20503509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 25074781 - 25074914
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcgtgtccgatactaacgcatgtctgactc 126  Q
    |||||| |||||| ||||||||||||| |||||||||||||  |||||||| || || || ||||||     ||||| || || ||||| |||| ||| |    
T  25074781 gacacgccgacaccgataataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcg-----gtgtctgacaccaacgcgtgtccgacac 25074875  T
Q  127 tgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    ||  ||||||||||| |||||||||| |||| |||||||    
T  25074876 tgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 23870638 - 23870573
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||| ||||| ||||||||||||| | ||||||||||||||||| | ||||| |||||| |||||    
T  23870638 gatacggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgattat 23870573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 52369774 - 52369839
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||| |||||||||||||| ||||| ||||||| || |||||| || ||||||||||||||||||    
T  52369774 cgacatggataataatttgagaaaattacataattcaatgtaatcataggtgtcgtgtcggtgtcg 52369839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 25652104 - 25652028
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgt 97  Q
    |||||| ||||| | |||||||||||||||||| ||||||| ||||| ||||||| |||| ||||| ||||| ||||    
T  25652104 gacactaacacgccaacacggataataatttgagaaaatgatataattcagtgtagttataggtgttgtgtcagtgt 25652028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 26508090 - 26508154
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| || |||||||||  ||||| | ||||||||||||||||| ||||||| |||||||||||    
T  26508090 gatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 26508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 39682870 - 39682914
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacata 66  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||    
T  39682870 gacactgacacgtggacacggataataatttaaaaaaatgtcata 39682914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 3164090 - 3164043
Alignment:
Q  30 cacgtcgacacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    ||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  3164090 cacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 10954939 - 10954994
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||||| ||||||   ||||||||||||||||| ||||||| |||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 28917990 - 28918045
Alignment:
Q  25 actgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||| |||||  | ||||||||||||||||| ||||||| |||||||||||    
T  28917990 actgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaatta 28918045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 47775714 - 47775769
Alignment:
Q  25 actgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| |||||||||||||||||||| | ||||||||| ||||| || ||||||||    
T  47775714 actgatacgtcgacacggataataatctaaaaaaatgatataattcaatgtaatta 47775769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 7928449 - 7928495
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||| | ||||||||||||||||| ||||||| ||||||||||||    
T  7928449 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattat 7928495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 8903424 - 8903489
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcg 93  Q
    |||||| |||||||||||||| ||||| |||||||||| ||  ||||||||||| ||||||||||||    
T  8903424 gacacgccgacacggataatattttgagaaaatgacat-atttagtgtaattataggtgtcgtgtcg 8903489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 15796367 - 15796309
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| |||||| | ||||||||||||||||| | ||||| |||||||||||    
T  15796367 gacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatta 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 16789710 - 16789668
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||    
T  16789710 cgacacagataataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 34185196 - 34185138
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| |||||||| ||||||||| ||||||| ||| ||| |||||||||||    
T  34185196 gacagtgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaatta 34185138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 40052318 - 40052364
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataat 40052364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 13807244 - 13807273
Alignment:
Q  136 cctaattcgaggagtgtccgtgtttcatag 165  Q
    ||||||||||||||||||||||||||||||    
T  13807244 cctaattcgaggagtgtccgtgtttcatag 13807273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 14979175 - 14979224
Alignment:
Q  30 cacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatt 79  Q
    |||| |||||| | ||||||||||||||||| ||||||| ||||||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 21720750 - 21720807
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatt 79  Q
    |||||||||||| |||||| ||||||||||||| || ||  |||||| ||||||||||    
T  21720750 gacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaatt 21720807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 21861660 - 21861697
Alignment:
Q  131 acacacctaattcgaggagtgtccgtgtttcatagaat 168  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  21861660 acacacctaatccgaggagtgtccgtgcttcatagaat 21861697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 49651846 - 49651801
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||| ||||||||||||||||| ||||||| || ||||||||    
T  49651846 cgacacggctaataatttgaaaaaatcacataattcactgtaatta 49651801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 10504974 - 10504938
Alignment:
Q  24 cactgacacgtcgacacggataataatttgaaaaaat 60  Q
    |||||||||||| |||| |||||||||||||||||||    
T  10504974 cactgacacgtcaacaccgataataatttgaaaaaat 10504938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 15544679 - 15544739
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatg 82  Q
    ||||||||||||| ||||| | ||||||||||| ||||| ||||||| | || ||||||||    
T  15544679 gacactgacacgttgacaccgctaataatttgataaaatcacataattctgtataattatg 15544739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 18427034 - 18427070
Alignment:
Q  131 acacacctaattcgaggagtgtccgtgtttcatagaa 167  Q
    |||||||||||  ||||||||||||||||||||||||    
T  18427034 acacacctaatctgaggagtgtccgtgtttcatagaa 18427070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 21149073 - 21149109
Alignment:
Q  42 gataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  21149073 gataataatttgagaaaatgacataattcagtgtaat 21149109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 25064895 - 25064955
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatg 82  Q
    |||| ||||||| |||||| | |||| |||||||||||| |||||||  ||||||||||||    
T  25064895 gacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattatg 25064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 34189425 - 34189469
Alignment:
Q  34 tcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||| ||||||||||||| ||||||||||| | |||||||||    
T  34189425 tcgacacagataataatttgagaaaatgacatatttcagtgtaat 34189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 34307831 - 34307775
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||||||||| ||||| ||||| | ||||||||||||  |||||||||||||||||    
T  34307831 taataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcggtgtcg 34307775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 34910325 - 34910361
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  34910325 taataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 20743350 - 20743273
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| || ||||| ||||||||||||    
T  20743350 acactgacacgccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcg 20743273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 24343499 - 24343570
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    |||||| |||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||||    
T  24343499 gacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgtc 24343570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 16402283 - 16402211
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    ||||||||| | |||||||||||||||||||| ||||| |||| ||||||||||||||| | |||||||||||    
T  16402283 acactgacatgccgacacggataataatttgagaaaataacatgatacagtgtaattatagctgtcgtgtcgg 16402211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 32910550 - 32910598
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattatgg 83  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  32910550 cgacacggataataatttgagaaaatgacataattcagtgtaattatgg 32910598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 32041928 - 32041861
Alignment:
Q  181 atacttacatcaatttgacctttctttgcaattttggaccaatcctttgctgccacaccagttttcca 248  Q
    ||||| ||||||| |||||||||||| ||||  |||| ||||||||| ||||||||||||||||||||    
T  32041928 atactcacatcaacttgacctttcttagcaacattgggccaatccttagctgccacaccagttttcca 32041861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 21945489 - 21945547
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||| | |||||| | ||||||||||||||||||||||||| |||||||||||    
T  21945489 gacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaatta 21945547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 34515946 - 34515892
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    |||||||||||||||||||||||||||||  | ||||||||||||| ||||||||    
T  34515946 acactgacacgtcgacacggataataattcaagaaaatgacataattcagtgtaa 34515892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 30298932 - 30298991
Alignment:
Q  22 gacactgacacgtcgacacggataataatttg-aaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | |||||||||| ||||||||||||||| |||||||||||    
T  30298932 gacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaatta 30298991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 30327800 - 30327859
Alignment:
Q  22 gacactgacacgtcgacacggataataatttg-aaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | |||||||||| ||||||||||||||| |||||||||||    
T  30327800 gacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaatta 30327859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 11651213 - 11651155
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtg 74  Q
    ||||| ||||||||||||||||||| | ||||||||| ||||||| ||||||| |||||    
T  11651213 gatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 20633465 - 20633546
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta-tggtgtcgtgtcggtgtcg 99  Q
    ||||| ||||||||||||||||||| | |||||||||||||||   ||||||| || ||||||||   |||||||||||||||||    
T  20633465 gatacggacactgacacgtcgacaccgctaataatttgaaaaa---acataattcaatgtaattacaagtgtcgtgtcggtgtcg 20633546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 7012052 - 7012105
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgt 75  Q
    ||||| |||||| |||||| ||||||||||||| ||||||||||||| ||||||    
T  7012052 gacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgt 7012105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 20521922 - 20521846
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcggtgtcg 99  Q
    |||||||||||| ||| || ||||||||||||| ||||| ||||||| || || ||| || |||||||||||||||||    
T  20521922 gacactgacacgccgataccgataataatttgataaaatcacataattcaatgaaatcat-gtgtcgtgtcggtgtcg 20521846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 43093601 - 43093552
Alignment:
Q  19 actgacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    ||||||||||||||||| ||||  ||||||||||||||||||| ||||||    
T  43093601 actgacactgacacgtcaacacccataataatttgaaaaaatggcataat 43093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 16303345 - 16303281
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| |||||||||||| |||||  ||||||| ||||||||||||| |||||  ||||||||||    
T  16303345 gatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaatta 16303281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 31243609 - 31243545
Alignment:
Q  34 tcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgt 97  Q
    |||||||  |||||||||||| ||||||||||||| ||||||||| || |||||| |||||||||    
T  31243609 tcgacacttataataatttgagaaaatgacataattcagtgtaatcataggtgtcatgtcggtgt 31243545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 37203264 - 37203308
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||    
T  37203264 gacacggctaataatttgaaaaaatgacataatttagtgtaatta 37203308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 15029751 - 15029810
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||||  ||||| | |||||||||||||| || ||||||| ||||||||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattat 15029810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 22440673 - 22440614
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||| || ||||||| | ||||||||||| ||||| ||||||| ||||||||||||    
T  22440673 gacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattat 22440614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 29205445 - 29205488
Alignment:
Q  37 acacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  29205445 acacggctaataatttgaaaaaatcacataattcagtgtaatta 29205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 40179709 - 40179650
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||||| |||||   ||||| ||||||||||| ||||||| ||||||||||||    
T  40179709 gacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattat 40179650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 3064918 - 3064868
Alignment:
Q  115 catgtctgactctgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    |||||| |||||||| |||| |||||| ||||||||||||||| |||||||    
T  3064918 catgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 3144710 - 3144648
Alignment:
Q  37 acacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    |||||||||||||||| | ||||||| |||||  |||||||| || |||||||||||||||||    
T  3144710 acacggataataatttcagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtc 3144648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 5654658 - 5654608
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    |||| |||||||| ||||||||||||| ||||||||||||| || ||||||    
T  5654658 gacatgtcgacactgataataatttgagaaaatgacataattcaatgtaat 5654608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 23293059 - 23293001
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| |||||| | ||||||||||||||||| ||||||| |||| ||||||    
T  23293059 gacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataatta 23293001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 27706250 - 27706192
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||||||||||   ||||||||| ||||||| |||||||  ||||||||||    
T  27706250 gacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 19230381 - 19230312
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgt 91  Q
    |||||||||| | ||||  ||||||||||||| ||||| ||||||| || ||||||||| ||||||||||    
T  19230381 acactgacacatggacatagataataatttgagaaaataacataattcaatgtaattataggtgtcgtgt 19230312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 34589779 - 34589703
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcggtgtcg 99  Q
    ||||| ||||| | ||||| ||||| ||||||| ||||||||||||| || |||||| || |||||||||| ||||||    
T  34589779 gacacggacacattgacaccgataacaatttgagaaaatgacataattcaatgtaatcat-gtgtcgtgtcagtgtcg 34589703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 54580074 - 54580037
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattat 54580037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 4383348 - 4383411
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| |||||||||||||||| ||   |||||||||| |||||| ||||||| |||||||||||    
T  4383348 gatacggacactgacacgtcgatacaactaataatttg-aaaaatcacataattcagtgtaatta 4383411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 5096169 - 5096129
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatga 62  Q
    |||| |||||||||||||| | |||||||||||||||||||    
T  5096169 gacattgacacgtcgacaccgctaataatttgaaaaaatga 5096129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 6273944 - 6274008
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaattatggt-gtcgtgtcggtgtcg 99  Q
    ||||| || |||||||||| ||||||| |||||  ||||||||||| || |||||||||||||||    
T  6273944 gacacagacaataatttgagaaaatgatataatttagtgtaattatagtcgtcgtgtcggtgtcg 6274008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 11596403 - 11596367
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  11596403 taataatttgaaaaaatcacataattcagtgtaatta 11596367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 15969345 - 15969385
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  15969345 gacacgtcgacactgataataattttaaaaaataacataat 15969385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 28964299 - 28964263
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  28964299 taataatttgaaaaaatcacataattcagtgtaatta 28964263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 37496690 - 37496746
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||||||| ||||| ||||||  ||||| ||||||||||||| || ||||||    
T  37496690 gacactgacacgttgacaccgataattttttgagaaaatgacataattcaatgtaat 37496746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 34446565 - 34446628
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||    
T  34446565 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 34446628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 6389729 - 6389805
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgt 97  Q
    |||||| ||||| |||||||||||||||||||| ||||||| |||||  |||||||| || ||||||||||||||||    
T  6389729 gacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgt 6389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 5970182 - 5970123
Alignment:
Q  21 tgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||||| |||||||||||    
T  5970182 tgacacggacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaatta 5970123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 12086411 - 12086345
Alignment:
Q  29 acacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    |||||||||||||||||||||||||| | ||||||||||| |||| |||| || |||||||||||||    
T  12086411 acacgtcgacacggataataatttgagataatgacataattcagtttaatcataggtgtcgtgtcgg 12086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 12696310 - 12696368
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  12696310 gacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 16766683 - 16766741
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  16766683 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 17168536 - 17168458
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||||||||| | |||| ||||||||||||| ||||||| |||||  |||||||| || ||||||||||||||||||    
T  17168536 gacactgacacgccaacactgataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtcggtgtcg 17168458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 10760914 - 10760870
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacata 66  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  10760914 gacactgacacgtcgacactgataataatttgagaaaatgacata 10760870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 28715295 - 28715339
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||    
T  28715295 gacacggctaataatttgaaaaaatgacataattcagtgtaatta 28715339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 7625108 - 7625167
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||| ||||||||||||||||||||||||||| ||||||| |||||  ||| |||||||    
T  7625108 gacaccgacacgtcgacacggataataatttgagaaaatgatataatttagtataattat 7625167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 7977900 - 7977845
Alignment:
Q  25 actgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  7977900 actgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 7977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 13851722 - 13851781
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||||||||||| | ||||||||||| ||||| || |||| ||||||||||||    
T  13851722 gacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattat 13851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 17841662 - 17841604
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||  ||||||||||    
T  17841662 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 12235578 - 12235521
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtc 92  Q
    |||||||||||||||| || ||||||||||||| ||||||||| || |||||||||||    
T  12235578 gacacggataataattagagaaaatgacataattcagtgtaatcataggtgtcgtgtc 12235521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 17341735 - 17341678
Alignment:
Q  24 cactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||| |||||| | ||||||||||| ||||| ||||||| ||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattat 17341678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 31959146 - 31959203
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||| || ||| | ||||||||||||||||| ||||||| |||||||||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaatta 31959203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 33303639 - 33303688
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacat 65  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||||||    
T  33303639 gatacggacactgacacatcgacactaataataatttgaaaaaatgacat 33303688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 17168887 - 17168935
Alignment:
Q  29 acacgtcgacacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    |||||||||||  ||||||||||||||||||||||||||| || |||||    
T  17168887 acacgtcgacattgataataatttgaaaaaatgacataattcaatgtaa 17168935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 19040341 - 19040397
Alignment:
Q  25 actgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||| |||||| | ||||||||||| ||||| ||||||| ||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 19040397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 166
Target Start/End: Original strand, 26247409 - 26247551
Alignment:
Q  19 actgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcgtgtccgatactaacgcat 117  Q
    ||||||||||||||   || |||||||||||||| | ||||||||||| |  ||| |||| || ||| ||||||||||||||     || || ||| | |    
T  26247409 actgacactgacacacagatacggataataatttaagaaaatgacatattttagtataatcataggtttcgtgtcggtgtcg-----gacaccaacacgt 26247503  T
Q  118 gtctgactctgaaacacacctaattcgaggagtgtccgtgtttcataga 166  Q
    ||||||| | ||| ||||||||||  |||||||||||||||||||||||    
T  26247504 gtctgacaccgaa-cacacctaatctgaggagtgtccgtgtttcataga 26247551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 7265666 - 7265607
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| | |||| | ||||||||||| ||||| ||||||| ||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattat 7265607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 7938102 - 7938161
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| |||||| | ||||||||||||||||| | |||||  |||||||||||    
T  7938102 gacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattat 7938161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 9658865 - 9658924
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| |||||| | ||||||||| | ||||| ||||||| ||||||||||||    
T  9658865 gacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattat 9658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 16388305 - 16388247
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||||||| | | | |||||||||||||||| ||||||| ||||||||||||    
T  16388305 gacactgacacgtcgataagca-aataatttgaaaaaatcacataattcagtgtaattat 16388247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 426587 - 426541
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||||    
T  426587 gacactgacacgccgacacagttaataatttgaaaaaatcacataat 426541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 8777046 - 8776988
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||||   ||||||||||||||||| ||| ||| |||||||||||    
T  8777046 gacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 9107443 - 9107385
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||| ||||| |||||| | ||||||||||||||||| ||| ||| |||||||||||    
T  9107443 gacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaatta 9107385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 10770747 - 10770689
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| | ||||   ||||||||||||||||| ||||||| |||||||||||    
T  10770747 gacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaatta 10770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 13211354 - 13211308
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||    
T  13211354 gacaccgacacgtcgacattgataataatttgagaaaatgacataat 13211308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 16833294 - 16833352
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||||   ||||||||||||||||| ||||| | |||||||||||    
T  16833294 gacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaatta 16833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 17435185 - 17435243
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||| |||||||||  | ||||||||| ||||||| ||||||| |||||||||||    
T  17435185 gacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaatta 17435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 34595120 - 34595178
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| ||||||   ||||||||||||||||| ||||||| |||||||||||    
T  34595120 gacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 1532225 - 1532285
Alignment:
Q  23 acactgacacgtcgacacg--gataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||||||||||   | ||||||||||| ||||| ||||||| ||||||||||||    
T  1532225 acactgacacgtcgacacaccgctaataatttgataaaattacataattcagtgtaattat 1532285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 6908082 - 6908119
Alignment:
Q  24 cactgacacgtcgacacggataataatttgaaaaaatg 61  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  6908082 cactgacacgtcgacacgggtaataatttgagaaaatg 6908119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 8713971 - 8714024
Alignment:
Q  28 gacacgtcgacacggataataatttg-aaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||| | |||||||||| ||||||| ||||||| |||||||||||    
T  8713971 gacacgtcgacacagttaataatttgaaaaaaatcacataattcagtgtaatta 8714024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 10842517 - 10842574
Alignment:
Q  21 tgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    |||||| |||||| |||||| | ||||||||||||||||| |||||||  ||||||||    
T  10842517 tgacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 17422327 - 17422282
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    ||||| |||||||||||| ||||||||||||| ||||||| |||||    
T  17422327 acactaacacgtcgacaccgataataatttgagaaaatgatataat 17422282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 28503219 - 28503170
Alignment:
Q  19 actgacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    ||||||||||||| || |||||  ||||| ||||||||||||||||||||    
T  28503219 actgacactgacatgttgacaccaataattatttgaaaaaatgacataat 28503170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 29815624 - 29815575
Alignment:
Q  19 actgacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    ||||||||||||| || |||||  ||||| ||||||||||||||||||||    
T  29815624 actgacactgacatgttgacaccaataattatttgaaaaaatgacataat 29815575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 34225860 - 34225812
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcg 93  Q
    |||||||||||||||||  |||||| |||||||||||| |||||||||||    
T  34225860 taataatttgaaaaaatcgcataattcagtgtaattat-gtgtcgtgtcg 34225812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 7569226 - 7569182
Alignment:
Q  37 acacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||| ||||||||||||| ||||| ||||||| ||||||||||||    
T  7569226 acacagataataatttgagaaaattacataattcagtgtaattat 7569182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 8805645 - 8805585
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatg 82  Q
    ||||| ||||||||| ||| | ||||||||||| ||||| |||||||  ||||||||||||    
T  8805645 gacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatg 8805585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 9629374 - 9629513
Alignment:
Q  27 tgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatg-gtgtcg-tgtcggtgtcgtgtccgatactaacgcatgtctgac 124  Q
    ||||||| |||||| |  |||||||||| ||||| ||||||| || |||||||||  |||||| ||||||||||||||| || || |||   |||| |||    
T  9629374 tgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtcgtgtcggacac-aacatgtgtccgac 9629472  T
Q  125 tctgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
     |||| ||||  ||||| |||||||||||| || |||||||    
T  9629473 actgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 31384928 - 31384964
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  31384928 taataatttgaaaaaatcacataattcagtgtaatta 31384964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 30404923 - 30404865
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||    
T  30404923 gacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 11308063 - 11307999
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  11308063 cgacacggata-taatttgaaaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcg 11307999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 19573970 - 19574042
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||| |||||| ||||||||||| | ||||| ||||||| |||||||||||| |||| |||||||||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataacataattcagtgtaattataggtggcgtgtcggtgtcg 19574042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 25544480 - 25544544
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    ||||||| |||||||||||| ||||||| ||||| ||||||||| || |||||||||||||||||    
T  25544480 cgacacgtataataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtcggtgtc 25544544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 30563408 - 30563472
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    |||||||||||||||||||| ||||||||||||| || ||||| ||| ||||| |||||||||||    
T  30563408 cgacacggataataatttgagaaaatgacataattcaatgtaactataggtgttgtgtcggtgtc 30563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 21782890 - 21782831
Alignment:
Q  23 acactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatg 82  Q
    ||||||||||| |||||| | ||||||||||| ||||| ||||||| |||||||||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattatg 21782831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 36756417 - 36756358
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||||||||||   |||||||||||| |||| ||||||| ||||||||||||    
T  36756417 gacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattat 36756358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 20539747 - 20539689
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||||| | ||||||||||||||||| | |||||  ||||||||||    
T  20539747 gacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaatta 20539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 21374772 - 21374714
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||| ||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  21374772 gacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 21374714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 28677892 - 28677954
Alignment:
Q  19 actgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||  ||| |||||| | ||||||||||||||||| ||||||| ||||||||||||    
T  28677892 actgacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattat 28677954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 30298514 - 30298464
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||||||| ||||||||||| | ||||||||||||| |||||||||    
T  30298514 gacacgtcgacaccgataataatttaataaaatgacataattcagtgtaat 30298464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 37986765 - 37986843
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |  |||||||| || ||| |||||| |||||||    
T  37986765 gacactgacacgccgacacagataataatttgaaaaaatgatatatttgagtgtaatcataggtatcgtgttggtgtcg 37986843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 39323250 - 39323308
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||| |||||||||| | ||||||||||| ||||| ||||||| |||||||||||    
T  39323250 gacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 166
Target Start/End: Complemental strand, 10535819 - 10535684
Alignment:
Q  35 cgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc---gtgtccgatactaacgcatgtctgactctgaa 130  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||| ||  ||||||||| |||| |   |||||||| ||||| |  |||||||| |        
T  10535819 cgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgttggtgacacagtgtccgacactaatgtgtgtctgacaccagg 10535720  T
Q  131 acacacctaattcgaggagtgtccgtgtttcataga 166  Q
    |||| |||||| |||||||||| |||| ||||||||    
T  10535719 acacgcctaatccgaggagtgttcgtgcttcataga 10535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 12668474 - 12668437
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattat 12668437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 23354711 - 23354647
Alignment:
Q  36 gacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtcg 99  Q
    ||||| ||||||||||||| ||||||| |||||  |||||||| || ||||||||||||||||||    
T  23354711 gacacagataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcg 23354647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 28412336 - 28412396
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatg 82  Q
    |||||| ||||||| |||| | ||||||||||| ||||| ||||||| |||||||||||||    
T  28412336 gacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaattatg 28412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 43586082 - 43586022
Alignment:
Q  18 tactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    |||||||||||||||||| |||| ||||| | ||||| ||||||||||||| || ||||||    
T  43586082 tactgacactgacacgtcaacacagataaaattttgagaaaatgacataattcaatgtaat 43586022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 4882766 - 4882711
Alignment:
Q  25 actgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||| || | |||| |||||||||||||| ||||| |||||||||||    
T  4882766 actgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaatta 4882711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 16069327 - 16069268
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| |||||| | ||||||||| ||||||| | ||||| ||||||||||||    
T  16069327 gacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 21616748 - 21616807
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||| |||||| |||||| | ||||||||||| ||||| ||||||| ||||||||||||    
T  21616748 gacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 21616807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 25317134 - 25317169
Alignment:
Q  33 gtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||||||| |||||||||||||||||||||||||||    
T  25317134 gtcgacaccgataataatttgaaaaaatgacataat 25317169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 12941008 - 12940950
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||| |||||   ||||||||||||||||| | ||||| |||||||||||    
T  12941008 gacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 15972859 - 15972917
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||||   ||||||||||||||||| ||| ||| |||||||||||    
T  15972859 gacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaatta 15972917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 24894375 - 24894433
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||| ||||||| ||||||| ||||| |||||    
T  24894375 gacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaatta 24894433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 27460012 - 27460070
Alignment:
Q  22 gacactgacacgtcgacacggataataatttg-aaaaaatgacataatacagtgtaatt 79  Q
    |||||||||||| |||||| | |||||||||| ||||||||||||||| |||| |||||    
T  27460012 gacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtataatt 27460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 37419729 - 37419787
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| ||||| ||  |||||||||||||||| ||| ||| |||||||||||    
T  37419729 gacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaatta 37419787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 37558963 - 37559021
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | |||||||||| |||||| ||||||| || ||||||||    
T  37558963 gacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaatta 37559021  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 38117232 - 38117174
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| ||||| | | |||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaatta 38117174  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 12748670 - 12748743
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    ||||| ||||||  |||| |||||||||||||| ||||||||||| | ||||||||| || ||||| |||||||    
T  12748670 gacacggacacgctgacatggataataatttgagaaaatgacatagttcagtgtaatcataggtgttgtgtcgg 12748743  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 23921233 - 23921298
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||| |||| ||||| ||||| || | ||||||||||| ||||| ||||||| ||||||||||||    
T  23921233 gatacagacattgacaggtcgataccgttaataatttgagaaaattacataattcagtgtaattat 23921298  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 24011042 - 24011099
Alignment:
Q  42 gataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcggtgtc 98  Q
    ||||||||||||| |||||||||||||  |||||||| || ||||||| |||||||||    
T  24011042 gataataatttgagaaaatgacataatttagtgtaatcataggtgtcgcgtcggtgtc 24011099  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 41047863 - 41047896
Alignment:
Q  25 actgacacgtcgacacggataataatttgaaaaa 58  Q
    |||||||||||||||| |||||||||||||||||    
T  41047863 actgacacgtcgacactgataataatttgaaaaa 41047896  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 44860416 - 44860449
Alignment:
Q  131 acacacctaattcgaggagtgtccgtgtttcata 164  Q
    ||||||||||||||||||||||||||| ||||||    
T  44860416 acacacctaattcgaggagtgtccgtgcttcata 44860449  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 11977704 - 11977736
Alignment:
Q  22 gacactgacacgtcgacacggataataatttga 54  Q
    ||||||||||||||||||| |||||||||||||    
T  11977704 gacactgacacgtcgacactgataataatttga 11977736  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 30335425 - 30335461
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||||||||||||||||  ||||||||||    
T  30335425 taataatttgaaaaaatgacataatttagtgtaatta 30335461  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 30717581 - 30717545
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  30717581 taataatttgaaaaaatcacataattcagtgtaatta 30717545  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 31808062 - 31808122
Alignment:
Q  21 tgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||||||||||  |||||| | ||||||||| | ||||| ||||||| ||||||||||||    
T  31808062 tgacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattat 31808122  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 34006978 - 34006930
Alignment:
Q  117 tgtctgactctgaaacacacctaattcgaggagtgtccgtgtttcatag 165  Q
    |||||||| | | |||||||||||||| ||||||||||||| |||||||    
T  34006978 tgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcatag 34006930  T

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Target: scaffold0598 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8147 - 8071
Alignment:
Q  1 accggatacgacatagatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaa 77  Q
    |||||| ||||||  || || ||||| |||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  8147 accggacacgacacggacacggacaccgacacgtcgatacggataataatttgagaaaatgacataattcagtgtaa 8071  T

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Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 51797 - 51855
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  51797 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

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Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 33430 - 33360
Alignment:
Q  28 gacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatggtgtcgtgtcggtgtc 98  Q
    |||||| |||||| | ||||||||||||||||| ||||||| |||||||||||   |||||||||||||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaatgtcgtgtcggtgtc 33360  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 92787 - 92851
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| |||||||||||| |||||| | ||||||||||| ||||| ||||||| |||||||||||    
T  92787 gatacggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 70264 - 70323
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    ||||| |||| |||||||| | ||||||||||||||||| ||||||| ||||||||||||    
T  70264 gacacagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattat 70323  T

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Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 20158 - 20216
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  20158 gacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 46668 - 46726
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||| ||||||| |||||| | ||||||||||||||||| ||||||| |||||||||||    
T  46668 gacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

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Target: scaffold0199 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 1944 - 2008
Alignment:
Q  31 acgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat-ggtgtcgtgtcgg 94  Q
    |||||||||||||||||||||||  ||||||||||| |  |||||||| || |||||||||||||    
T  1944 acgtcgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 2008  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 192328 - 192264
Alignment:
Q  16 gatactgacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||| |||||||||||| |||||| | ||||||||||| ||||| ||||||| | |||||||||    
T  192328 gatacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 241580 - 241640
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattatg 82  Q
    |||||||||||| |||||| | |||||||||| |||||| |||||||  ||||||||||||    
T  241580 gacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatg 241640  T

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Target: scaffold0722 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 7110 - 7059
Alignment:
Q  17 atactgacactgacacgtcgacacggataataatttgaaaaaatgacataat 68  Q
    |||| |||||||| |||||||||| | ||||||||||||||||| |||||||    
T  7110 atacggacactgatacgtcgacacagctaataatttgaaaaaattacataat 7059  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 23406 - 23465
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaattat 81  Q
    |||||||||||| |||||| |||||||| |  ||||||| ||||||| ||||||||||||    
T  23406 gacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattat 23465  T

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Target: scaffold0652 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 535 - 477
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||| ||| |||||| | ||||||||||||||||| ||| ||| |||||||||||    
T  535 gacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaatta 477  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 3922 - 3864
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaatta 80  Q
    |||||||| | | |||||||| ||||||||| ||||||| ||||||| |||||||||||    
T  3922 gacactgatatgccgacacggttaataatttaaaaaaatcacataattcagtgtaatta 3864  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 14538 - 14574
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  14538 taataatttgaaaaaatcacataattcagtgtaatta 14574  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 8018 - 8054
Alignment:
Q  44 taataatttgaaaaaatgacataatacagtgtaatta 80  Q
    ||||||||||||||||| | |||||||||||||||||    
T  8018 taataatttgaaaaaatcatataatacagtgtaatta 8054  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 18181 - 18125
Alignment:
Q  22 gacactgacacgtcgacacggataataatttgaaaaaatgacataatacagtgtaat 78  Q
    ||||||||||||||||||| ||||| | ||||| ||||| ||||||| || ||||||    
T  18181 gacactgacacgtcgacaccgataaaattttgagaaaataacataattcaatgtaat 18125  T

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