View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19909_low_33 (Length: 248)
Name: NF19909_low_33
Description: NF19909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19909_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 2896943 - 2896776
Alignment:
| Q |
64 |
tgtataacttatacgtcctttctaagaaaatatatcttcaaataaattgatataaaatttgattttgatccactagttgaaatttagcctatgattttta |
163 |
Q |
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| T |
2896943 |
tgtataacttatacatcctttctaagaaaatatatcttcaaataaattgatataaaatttgattttgatccactagttgaaatttagcctatgattttta |
2896844 |
T |
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| Q |
164 |
attcttcaaatagaaattcacatatttttagaggaaatataattttacattaagaacataatacttac |
231 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2896843 |
attcttcaaatagaaattcacatttttttagaggaaatataattttacattaagaacataatacttac |
2896776 |
T |
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