View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19910_high_1 (Length: 994)

Name: NF19910_high_1
Description: NF19910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19910_high_1
NF19910_high_1
[»] chr4 (15 HSPs)
chr4 (14-612)||(54147477-54148077)
chr4 (716-978)||(54147113-54147373)
chr4 (394-521)||(16870567-16870700)
chr4 (148-225)||(16870777-16870858)
chr4 (127-175)||(16871279-16871327)
chr4 (307-378)||(16870654-16870724)
chr4 (311-405)||(42265400-42265492)
chr4 (17-99)||(24225768-24225851)
chr4 (479-521)||(16870396-16870438)
chr4 (227-267)||(16870798-16870838)
chr4 (187-227)||(24225506-24225546)
chr4 (169-224)||(16870685-16870738)
chr4 (206-266)||(16870705-16870766)
chr4 (188-227)||(42265453-42265492)
chr4 (187-224)||(42265426-42265462)
[»] chr6 (22 HSPs)
chr6 (12-177)||(28063341-28063506)
chr6 (188-282)||(21862276-21862371)
chr6 (195-287)||(28063589-28063679)
chr6 (164-225)||(21862270-21862332)
chr6 (206-267)||(13167536-13167597)
chr6 (127-175)||(9291076-9291124)
chr6 (49-113)||(33424299-33424363)
chr6 (307-378)||(21862241-21862311)
chr6 (293-386)||(21862043-21862137)
chr6 (195-266)||(21862102-21862173)
chr6 (308-378)||(21862144-21862213)
chr6 (290-378)||(28063528-28063618)
chr6 (164-223)||(28063621-28063678)
chr6 (164-213)||(13167527-13167576)
chr6 (291-346)||(28063622-28063678)
chr6 (206-282)||(21862179-21862259)
chr6 (207-265)||(13167445-13167502)
chr6 (179-225)||(21862173-21862219)
chr6 (167-224)||(21862082-21862137)
chr6 (184-224)||(10741529-10741569)
chr6 (422-467)||(13167367-13167412)
chr6 (474-515)||(28063772-28063813)
[»] chr7 (44 HSPs)
chr7 (372-593)||(21813696-21813918)
chr7 (22-114)||(21814149-21814241)
chr7 (187-266)||(44338338-44338416)
chr7 (372-521)||(11828578-11828721)
chr7 (394-521)||(46963841-46963974)
chr7 (195-282)||(15623052-15623139)
chr7 (307-378)||(15623104-15623174)
chr7 (195-286)||(15623145-15623236)
chr7 (291-409)||(21813819-21813940)
chr7 (195-266)||(44338430-44338500)
chr7 (291-378)||(44338287-44338375)
chr7 (307-388)||(11828575-11828656)
chr7 (116-184)||(21813995-21814063)
chr7 (127-175)||(46963499-46963547)
chr7 (307-378)||(15623197-15623267)
chr7 (341-451)||(11828578-11828688)
chr7 (394-521)||(44338205-44338333)
chr7 (291-378)||(44338379-44338467)
chr7 (164-225)||(44338500-44338561)
chr7 (302-378)||(15623006-15623081)
chr7 (291-378)||(44338471-44338560)
chr7 (218-266)||(44338522-44338570)
chr7 (429-560)||(6530511-6530643)
chr7 (164-225)||(15623084-15623145)
chr7 (280-378)||(46963788-46963887)
chr7 (195-263)||(15623238-15623306)
chr7 (164-224)||(44338318-44338376)
chr7 (164-224)||(44338410-44338468)
chr7 (14-75)||(11828263-11828324)
chr7 (363-436)||(21813823-21813896)
chr7 (187-224)||(21813850-21813887)
chr7 (25-114)||(10236744-10236835)
chr7 (148-224)||(46963778-46963856)
chr7 (179-225)||(15623192-15623238)
chr7 (15-178)||(24486819-24486985)
chr7 (181-224)||(11828572-11828615)
chr7 (182-225)||(15623009-15623052)
chr7 (728-798)||(24487454-24487524)
chr7 (280-310)||(26403153-26403183)
chr7 (280-310)||(44338654-44338684)
chr7 (162-227)||(21813878-21813943)
chr7 (142-183)||(24487013-24487054)
chr7 (190-227)||(24487088-24487125)
chr7 (834-878)||(24487555-24487600)
[»] chr2 (23 HSPs)
chr2 (330-593)||(1173541-1173809)
chr2 (291-521)||(38584083-38584322)
chr2 (291-467)||(1173469-1173647)
chr2 (206-282)||(1173447-1173523)
chr2 (195-282)||(1173343-1173430)
chr2 (394-521)||(8986129-8986262)
chr2 (281-378)||(1173273-1173372)
chr2 (294-378)||(1173379-1173465)
chr2 (165-225)||(1173283-1173343)
chr2 (164-224)||(1173468-1173528)
chr2 (127-175)||(8986555-8986603)
chr2 (168-225)||(1173379-1173436)
chr2 (156-227)||(38584074-38584145)
chr2 (126-169)||(1173171-1173214)
chr2 (307-378)||(8986216-8986286)
chr2 (228-286)||(1173283-1173341)
chr2 (141-177)||(32290827-32290863)
chr2 (24-114)||(2484652-2484744)
chr2 (394-467)||(32290565-32290642)
chr2 (422-470)||(32290597-32290645)
chr2 (187-227)||(38584202-38584242)
chr2 (227-282)||(38584082-38584137)
chr2 (187-229)||(32290556-32290598)
[»] chr5 (21 HSPs)
chr5 (394-593)||(9511654-9511854)
chr5 (195-378)||(24136891-24137075)
chr5 (164-282)||(24136927-24137043)
chr5 (394-521)||(11335415-11335537)
chr5 (158-224)||(11335364-11335430)
chr5 (309-378)||(24137046-24137114)
chr5 (290-404)||(9511782-9511899)
chr5 (129-184)||(24137213-24137268)
chr5 (38-114)||(9512187-9512263)
chr5 (131-184)||(9512063-9512116)
chr5 (281-388)||(11335361-11335469)
chr5 (164-227)||(24136919-24136981)
chr5 (187-239)||(24136876-24136928)
chr5 (141-225)||(24137075-24137163)
chr5 (361-440)||(9511777-9511856)
chr5 (474-521)||(24136725-24136772)
chr5 (310-378)||(9511777-9511845)
chr5 (187-221)||(9511811-9511845)
chr5 (165-227)||(9511836-9511898)
chr5 (228-282)||(11335371-11335425)
chr5 (331-378)||(24136808-24136855)
[»] chr3 (16 HSPs)
chr3 (22-114)||(16462689-16462781)
chr3 (280-378)||(42530736-42530835)
chr3 (361-521)||(50295478-50295636)
chr3 (195-282)||(46692012-46692099)
chr3 (127-185)||(50295901-50295959)
chr3 (164-225)||(46692044-46692105)
chr3 (291-385)||(46692045-46692141)
chr3 (158-224)||(42530767-42530831)
chr3 (127-177)||(42531001-42531051)
chr3 (127-177)||(46691878-46691928)
chr3 (293-439)||(50295527-50295677)
chr3 (187-238)||(42530722-42530773)
chr3 (156-225)||(46691942-46692012)
chr3 (230-286)||(50295620-50295677)
chr3 (307-378)||(46691970-46692041)
chr3 (411-450)||(2593560-2593599)
[»] chr1 (14 HSPs)
chr1 (156-225)||(15629922-15629990)
chr1 (372-521)||(2072369-2072519)
chr1 (164-224)||(15630022-15630081)
chr1 (372-521)||(2075899-2076049)
chr1 (206-282)||(15630001-15630076)
chr1 (284-378)||(15629924-15630019)
chr1 (291-373)||(15630023-15630107)
chr1 (315-388)||(19825091-19825164)
chr1 (305-387)||(2072364-2072446)
chr1 (305-387)||(2075894-2075976)
chr1 (127-175)||(15629787-15629835)
chr1 (380-508)||(19825094-19825223)
chr1 (187-227)||(19825117-19825157)
chr1 (341-404)||(15630044-15630107)
[»] chr8 (19 HSPs)
chr8 (187-266)||(20242015-20242093)
chr8 (187-266)||(20250974-20251052)
chr8 (195-266)||(20242107-20242177)
chr8 (291-378)||(20241964-20242052)
chr8 (291-378)||(20251015-20251103)
chr8 (394-521)||(20241882-20242010)
chr8 (291-378)||(20242056-20242144)
chr8 (291-378)||(20250923-20251011)
chr8 (394-521)||(20251057-20251185)
chr8 (164-225)||(20242177-20242238)
chr8 (291-378)||(20242148-20242237)
chr8 (218-266)||(20242199-20242247)
chr8 (164-224)||(20241995-20242053)
chr8 (164-224)||(20242087-20242145)
chr8 (164-224)||(20250922-20250980)
chr8 (164-224)||(20251014-20251072)
chr8 (218-266)||(20250913-20250960)
chr8 (280-310)||(20242331-20242361)
chr8 (280-310)||(20250799-20250829)
[»] scaffold0499 (2 HSPs)
scaffold0499 (367-466)||(7233-7329)
scaffold0499 (194-223)||(7304-7333)


Alignment Details
Target: chr4 (Bit Score: 446; Significance: 0; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 14 - 612
Target Start/End: Complemental strand, 54148077 - 54147477
Alignment:
Q  14 catcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaaccaa 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  54148077 catcaatcagccaaagagagaaattatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatacagaagaaccaa 54147978  T
Q  114 tcgagagaaaaacaaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcacc 213  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54147977 tcgagagagaaacaaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaagg-ggagaagaaaccaaattgtgagcactcgactcacc 54147879  T
Q  214 aaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaatcaatcaaaagaatcaaaaggggg--agaaa 311  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||  |||||    
T  54147878 aaacaaccaacttgaagaatcaaaa-ggggagaagaaaccaaattatgagcactcgacccaccaaacaatcaatcagaagaatcaaaagggggaaagaaa 54147780  T
Q  312 ccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagcacctaattcaccaaacaactaaagt 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||  ||| |    
T  54147779 ccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaactaaagtgtgagcacctgactcaccaaacaaacaaatt 54147680  T
Q  412 gtgagcacctgactcatcaaacaaaca----aattatgagcacttgacccaccaaacaaataatatccaattgtgagcactatcttgactcacctaacaa 507  Q
     ||||||| |||| || ||||||||||    |||  ||||||||||||| |||||||||| |  | ||||||||||| ||||||||||||||||||||||    
T  54147679 atgagcacttgacccaccaaacaaacaatccaatagtgagcacttgacctaccaaacaaaca--aaccaattgtgaggactatcttgactcacctaacaa 54147582  T
Q  508 ccaaacaaattgaaagcgaatccaaatcaaaccaaactgaaccaaacgaaccatgcaaagacaaattgacgaaccaatatgaaccacaatgaatcaagcc 607  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54147581 ccaaacaaattcaaaatgaatccaaatcaaaccaaactgaaccaaacgaaccatgcaaagacaaattgacgaaccaatatgaaccacaatgaatcaagcc 54147482  T
Q  608 aaacc 612  Q
    |||||    
T  54147481 aaacc 54147477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 716 - 978
Target Start/End: Complemental strand, 54147373 - 54147113
Alignment:
Q  716 tcatagaccaacacaattttgcagacattgagaagactagttaccaatgccatgttatcacaacaatgaagcctactaactcccaagcaccaaaaaacca 815  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  54147373 tcatagaccaacacaattttgtagacattgagaagactagttaccaatgccatgttatcacaacaatgaagcctactaactcccaagcactaaaaaacca 54147274  T
Q  816 atttatgcttaggtacactaccttcaccattagaaatttatcggtctcccaatcaaaacaaaaaagcaacatgctaatcaaccaataggaactaattttg 915  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  54147273 atttatgcttaggtacactaccttcaccattataaatttatcggtctcccaatcaaaac--aaaagcaacatgctaatcaaccaataggaactaattttg 54147176  T
Q  916 accagcaaattaaatgagaaaaagaagaaacaaaccatattgaatagtcatggacgaacaaaa 978  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54147175 accagcaaattaaatgagaaaaagaagaaacaaaccatattgaatagtcatggacgaacaaaa 54147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 394 - 521
Target Start/End: Complemental strand, 16870700 - 16870567
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat------atccaattgtgagcac 487  Q
    |||||||||||| |||||||||| |   |||||| ||||||| |||||||||||  |||||||||||||||||| ||       | ||||||||||||||    
T  16870700 tcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaattatgagttcttgacccaccaaacaaacaaatgaacaaaccaattgtgagcac 16870601  T
Q  488 tatcttgactcacctaacaaccaaacaaattgaa 521  Q
    ||| |||||||||| |||||||||||||||||||    
T  16870600 tattttgactcacccaacaaccaaacaaattgaa 16870567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 16870858 - 16870777
Alignment:
Q  148 gggagaagtgcaatca----gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    ||||||||||||||||    ||||||| |||| | ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16870858 gggagaagtgcaatcaatgagaagaataaaaaaggggagaagaaaccaaattatgagcactcgactcacgaaacaaccaaat 16870777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 16871327 - 16871279
Alignment:
Q  127 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaa 175  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16871327 aaccaaagaatcatcaaaagtgggagaagtgcaattagaagaatcaaaa 16871279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 16870724 - 16870654
Alignment:
Q  307 agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||||||| |  ||||||||||||||||| |||||||| | |||||||||||||| ||||    
T  16870724 agaaaccaaattgtgagcac-atgctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaa 16870654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 405
Target Start/End: Complemental strand, 42265492 - 42265400
Alignment:
Q  311 accaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagcacctaattcaccaaacaac 405  Q
    ||||||||||||||||   | |||||||||||||||| |||||| ||| |||||||||||||||||||  |||||||| | | ||||||||||||    
T  42265492 accaaattgtgagcacttgaatcaccaaacaaccaaattgtgag-actcgactcaccaaacaaccaaacagtgagcacttga-tcaccaaacaac 42265400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 24225851 - 24225768
Alignment:
Q  17 caatcagccaaagagagaaatcatccaagt-agaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaacca 99  Q
    |||||| |||||||||| || |||||||   | ||||||||||||||| |||||||||||| ||| ||||||||||| ||||||    
T  24225851 caatcaaccaaagagagtaaccatccaaaacataagaaccatttcaaattaaaccaaacaagaatcggtagggagaaacaacca 24225768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 479 - 521
Target Start/End: Complemental strand, 16870438 - 16870396
Alignment:
Q  479 tgtgagcactatcttgactcacctaacaaccaaacaaattgaa 521  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  16870438 tgtgagcactattttgactcaccaaacaaccaaacaaattgaa 16870396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 16870838 - 16870798
Alignment:
Q  227 gaagaatcaaaagggggagaagaaaccaaattatgagcact 267  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  16870838 gaagaataaaaaaggggagaagaaaccaaattatgagcact 16870798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 24225546 - 24225506
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  24225546 aaccaaattgtaagcactcgattcaccaaacaaccaaattg 24225506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 16870738 - 16870685
Alignment:
Q  169 atcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||||||||    
T  16870738 atcaaaagg-ggagaagaaaccaaattgtgagcacatg-ctcaccaaacaaccaaa 16870685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 16870766 - 16870705
Alignment:
Q  206 gactcaccaaacaaccaaattgaagaat--caaaagggggagaagaaaccaaattatgagcac 266  Q
    ||||||| || |||||||||||||||||  ||||||||| ||||||||||||||| |||||||    
T  16870766 gactcactaatcaaccaaattgaagaatatcaaaagggg-agaagaaaccaaattgtgagcac 16870705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 42265492 - 42265453
Alignment:
Q  188 accaaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  42265492 accaaattgtgagcacttgaatcaccaaacaaccaaattg 42265453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 42265462 - 42265426
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||| |||||||||||||||||||||||    
T  42265462 aaccaaattgtgag-actcgactcaccaaacaaccaaa 42265426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 3e-57; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 12 - 177
Target Start/End: Original strand, 28063341 - 28063506
Alignment:
Q  12 atcatcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaacc 111  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||  ||||||||||||||||||| | |||||||    
T  28063341 atcatcaaccagccaaagagagaaatcatccaagcagaagaaccatttcaaactaaaccaaacaagcatcagtagggagaagcaaccatacaaaagaacc 28063440  T
Q  112 aatcgagagaaaaacaaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaagg 177  Q
    ||| || ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  28063441 aattgatagagaaacaaccaaagaatcatcaaaagtgggagaaatgcaatcagaaggatcaaaagg 28063506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 21862371 - 21862276
Alignment:
Q  188 accaaattgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaa-gggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    |||||| |||||| | | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  || ||||||||||    
T  21862371 accaaagtgtgagaattagactcaccaaacaaccaaattgaagaatcaaaatgggggagaagaaaccaaattgtgagcactcgactcaccaaacaa 21862276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 28063589 - 28063679
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaatcaat 287  Q
    |||||| ||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| | || |||||||||| ||||    
T  28063589 tgtgagaactagactcaccaaacaaccaaattgaagaatcaaaa--gggagaagaaaccaaattgtgagcacctgactcaccaaacaaccaat 28063679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 21862332 - 21862270
Alignment:
Q  164 gaagaatcaaaa-ggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  21862332 gaagaatcaaaatgggggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 21862270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 13167597 - 13167536
Alignment:
Q  206 gactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcact 267  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||    
T  13167597 gactcaccaaacaaccaaattgaagaatcagaagggggagaagaaaccaaactgtgagcact 13167536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 9291076 - 9291124
Alignment:
Q  127 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaa 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9291076 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaa 9291124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 33424299 - 33424363
Alignment:
Q  49 aagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaaccaa 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||    
T  33424299 aagaaccatttcaaactaaaccaaacaagaatcggtaaggagaagcaaccatagagaagaaccaa 33424363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 21862311 - 21862241
Alignment:
Q  307 agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    ||||||||||||||||||||   |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  21862311 agaaaccaaattgtgagcactcgactcaccaaacaaccaaa-tgtgagagctagactcaccaaacaaccaaa 21862241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 293 - 386
Target Start/End: Complemental strand, 21862137 - 21862043
Alignment:
Q  293 gaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagc 386  Q
    |||||||||||||   |||||||||||||||||||| |  |||| ||||||||||||||||||||| | |||||||||||||| |||| |||||||    
T  21862137 gaatcaaaaggggagaagaaaccaaattgtgagcac-acgctcaacaaacaaccaaaatgtgagaattcgactcaccaaacaagcaaattgtgagc 21862043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 21862173 - 21862102
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaa-gaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  21862173 tgtgagaactagactcaccaaacaaccaaattgaacgaatcaaaa-ggggagaagaaaccaaattgtgagcac 21862102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 308 - 378
Target Start/End: Complemental strand, 21862213 - 21862144
Alignment:
Q  308 gaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    ||||||||||  |||||||   |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21862213 gaaaccaaatattgagcactcgactcaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 21862144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 378
Target Start/End: Original strand, 28063528 - 28063618
Alignment:
Q  290 aaagaatcaaaaggggg---agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||||   ||||| ||||||| ||| |   |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  28063528 aaagaatcaaaagggggtgaagaaatcaaattgggagaattcaacttaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 28063618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 28063621 - 28063678
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaa 223  Q
    ||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||    
T  28063621 gaagaatcaaaagg--gagaagaaaccaaattgtgagcacctgactcaccaaacaaccaa 28063678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 13167576 - 13167527
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcacc 213  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  13167576 gaagaatcagaagggggagaagaaaccaaactgtgagcactcgactcacc 13167527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 28063622 - 28063678
Alignment:
Q  291 aagaatcaaaaggggga-gaaaccaaattgtgagcaccaaactcaccaaacaaccaa 346  Q
    |||||||||||||| || ||||||||||||||||||||  |||||||||||||||||    
T  28063622 aagaatcaaaagggagaagaaaccaaattgtgagcacctgactcaccaaacaaccaa 28063678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 21862259 - 21862179
Alignment:
Q  206 gactcaccaaacaaccaaattgaagaatcaaaa----gggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    |||||||||||||||||||||||||||||| ||    |||||||| ||||||||||  ||||||||  || ||||||||||    
T  21862259 gactcaccaaacaaccaaattgaagaatcagaagggggggggagaggaaaccaaatattgagcactcgactcaccaaacaa 21862179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 13167502 - 13167445
Alignment:
Q  207 actcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagca 265  Q
    |||||||| ||||||||||||||||| ||||| |||||||||| |||||||| ||||||    
T  13167502 actcaccacacaaccaaattgaagaaccaaaa-ggggagaagacaccaaattgtgagca 13167445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 21862219 - 21862173
Alignment:
Q  179 ggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||||    
T  21862219 ggagaggaaaccaaatattgagcactcgactcaccaaacaaccaaat 21862173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 21862137 - 21862082
Alignment:
Q  167 gaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    ||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||    
T  21862137 gaatcaaaagg-ggagaagaaaccaaattgtgagcacacg-ctcaacaaacaaccaaa 21862082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 10741569 - 10741529
Alignment:
Q  184 agaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  10741569 agaaaccaaattgtgagtactcgactcaccgaacaaccaaa 10741529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 467
Target Start/End: Complemental strand, 13167412 - 13167367
Alignment:
Q  422 gactcatcaaacaaacaaattatgagcacttgacccaccaaacaaa 467  Q
    |||||| ||||||| ||||||  |||||||||||||||||||||||    
T  13167412 gactcaccaaacaagcaaattgcgagcacttgacccaccaaacaaa 13167367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 474 - 515
Target Start/End: Original strand, 28063772 - 28063813
Alignment:
Q  474 ccaattgtgagcactatcttgactcacctaacaaccaaacaa 515  Q
    |||| ||||||||| ||||| |||||||||||||||||||||    
T  28063772 ccaaatgtgagcacaatcttaactcacctaacaaccaaacaa 28063813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 6e-49; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 372 - 593
Target Start/End: Complemental strand, 21813918 - 21813696
Alignment:
Q  372 aaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat 471  Q
    ||||||| |||| | || || |||||||| |||| ||| |||||||||  |||||| ||||||| |||| | |||||||||||| ||||||||||||||     
T  21813918 aaccaaattgtgggtacttatttcaccaagcaaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcacttgactcaccaaacaaataaa 21813819  T
Q  472 atccaattgtgagcactatcttgactcacctaacaaccaaacaaattgaa---agcgaatccaaatcaaaccaaactgaaccaaacgaaccatgcaaaga 568  Q
      ||||||||||| | ||||||||||| ||||||||||||||||||||||   | ||||||||||||||||| ||||||| |||||||||||  ||||||    
T  21813818 --ccaattgtgaggaatatcttgactcgcctaacaaccaaacaaattgaaccaaccgaatccaaatcaaaccgaactgaatcaaacgaaccagacaaaga 21813721  T
Q  569 caaattgacgaaccaatatgaacca 593  Q
    |||||||||||||||||| ||||||    
T  21813720 caaattgacgaaccaatacgaacca 21813696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 21814241 - 21814149
Alignment:
Q  22 agccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaaccaat 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||    
T  21814241 agccaaagagagaaatcatccaagcagaagaaccatttcaaactaaaccaaacaagaattggtagggagaagcaatcatacaaaagaaccaat 21814149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 44338416 - 44338338
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  44338416 aaccaaagtgtgagaactcgactcaccaaaccaccaaattgaagaatcaaaa-ggggagaagaaaccaaattgtgagcac 44338338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 372 - 521
Target Start/End: Original strand, 11828578 - 11828721
Alignment:
Q  372 aaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat 471  Q
    ||||||| |||||| || ||| |||||||||||| ||| |||||||||| |||||| || |||| |||||| |||||||||||||||||||||      |    
T  11828578 aaccaaattgtgagtacttaactcaccaaacaaccaaaatgtgagcacccgactcaccagacaaccaaattgtgagcacttgacccaccaaac------t 11828671  T
Q  472 atccaattgtgagcactatcttgactcacctaacaaccaaacaaattgaa 521  Q
    | | ||||||||||||||||||| |||| |  |||| |||||||||||||    
T  11828672 aacaaattgtgagcactatcttgtctcatcctacaatcaaacaaattgaa 11828721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 394 - 521
Target Start/End: Original strand, 46963841 - 46963974
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat------atccaattgtgagcac 487  Q
    |||||||||||| |||||||||| |   |||||| ||||||| |||||||||||  |||||||||||||||||| ||       | ||||||||||||||    
T  46963841 tcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaattatgagttcttgacccaccaaacaaacaaatgaacaaaccaattgtgagcac 46963940  T
Q  488 tatcttgactcacctaacaaccaaacaaattgaa 521  Q
    ||| |||||||||| |||||||||||||||||||    
T  46963941 tattttgactcacccaacaaccaaacaaattgaa 46963974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 15623052 - 15623139
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    |||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||  || ||||||||||    
T  15623052 tgtgagaactagactcaccaaacaaccaaattgaagaatcagtagggggagaagaaacaaaattgtgagcactcaactcaccaaacaa 15623139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 15623104 - 15623174
Alignment:
Q  307 agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15623104 agaaacaaaattgtgagcactcaactcaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 15623174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 15623145 - 15623236
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaatcaa 286  Q
    |||||| ||| |||||||||||||||||||||||||||||   ||||||||||||||| ||||| ||||||||  || ||||||||||||||    
T  15623145 tgtgagaactagactcaccaaacaaccaaattgaagaatcggtagggggagaagaaacaaaattgtgagcactcaactcaccaaacaatcaa 15623236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 291 - 409
Target Start/End: Complemental strand, 21813940 - 21813819
Alignment:
Q  291 aagaatcaaaagggggagaaa---ccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagca 387  Q
    |||||||||||||||||||||   |||||||||| | ||  |  ||||||| |||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  21813940 aagaatcaaaagggggagaaaaaaccaaattgtgggtacttatttcaccaagcaaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagca 21813841  T
Q  388 cctaattcaccaaacaactaaa 409  Q
    | | | ||||||||||| ||||    
T  21813840 cttgactcaccaaacaaataaa 21813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 44338500 - 44338430
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  44338500 tgtgagaactctactcaccaaacaaccaaattgaagaatcaaaa-ggggagaagaaaccaaattgtgagcac 44338430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 44338375 - 44338287
Alignment:
Q  291 aagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||   |||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  44338375 aagaatcaaaaggggagaagaaaccaaattgtgagcac-acgctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaa 44338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 11828575 - 11828656
Alignment:
Q  307 agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagcac 388  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||| ||  ||||||||| ||||||||| |||||||||    
T  11828575 agaaaccaaattgtgagtacttaactcaccaaacaaccaaaatgtgagcacccgactcaccagacaaccaaattgtgagcac 11828656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 21814063 - 21813995
Alignment:
Q  116 gagagaaaaacaaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaaggaggagaa 184  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  21814063 gagagagaaataaccaaagaatcatcaaaagtgggagaagtgcaattagaacaatcaaaagggggagaa 21813995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 46963499 - 46963547
Alignment:
Q  127 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaa 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46963499 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaa 46963547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 15623197 - 15623267
Alignment:
Q  307 agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||| |||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  15623197 agaaacaaaattgtgagcactcaactcaccaaacaatcaaa-tgtgagaactagactcaccaaacaaccaaa 15623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 341 - 451
Target Start/End: Original strand, 11828578 - 11828688
Alignment:
Q  341 aaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaa 440  Q
    ||||||| |||||| |||  |||||||||||||||||| ||||||||||  | |||||| ||||| ||| ||||||||| |||| || ||||| ||||||    
T  11828578 aaccaaattgtgagtacttaactcaccaaacaaccaaaatgtgagcacccgactcaccagacaaccaaattgtgagcacttgacccaccaaactaacaaa 11828677  T
Q  441 ttatgagcact 451  Q
    || ||||||||    
T  11828678 ttgtgagcact 11828688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 394 - 521
Target Start/End: Complemental strand, 44338333 - 44338205
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat--atccaattgtgagcactatc 491  Q
    |||||||||||| ||| |||||| ||  |||||| ||||||| |||||||||||  || |||||||||||||||  |   | | |||||||||||||||     
T  44338333 tcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaattatgagtgct-gacccaccaaacaaacgaacaaactaattgtgagcactatt 44338235  T
Q  492 ttgactcacctaacaaccaaacaaattgaa 521  Q
    |||||||||| |||||||||||||||||||    
T  44338234 ttgactcacccaacaaccaaacaaattgaa 44338205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 44338467 - 44338379
Alignment:
Q  291 aagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||   |||||||||||||||||||| |  ||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  44338467 aagaatcaaaaggggagaagaaaccaaattgtgagcac-acgctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaaa 44338379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 44338561 - 44338500
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||||    
T  44338561 gaagaatcaaaagggggagaagaaaccaaattgtgagcacactactcaccagacaaccaaat 44338500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 302 - 378
Target Start/End: Original strand, 15623006 - 15623081
Alignment:
Q  302 gggggagaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||| ||||||| ||| ||||||||   |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15623006 ggggaagaaaccgaatcgtgagcacacgactcaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 15623081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 44338560 - 44338471
Alignment:
Q  291 aagaatcaaaagggggagaa---accaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    ||||||||||||||||||||   ||||||||||||||||   |||||||| ||||||||| ||||||||||  ||||||||||||||||||    
T  44338560 aagaatcaaaagggggagaagaaaccaaattgtgagcacactactcaccagacaaccaaa-tgtgagaactctactcaccaaacaaccaaa 44338471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 44338570 - 44338522
Alignment:
Q  218 aaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44338570 aaccaaattgaagaatcaaaagggggagaagaaaccaaattgtgagcac 44338522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 429 - 560
Target Start/End: Complemental strand, 6530643 - 6530511
Alignment:
Q  429 caaacaaacaaattatgagcacttgacccaccaaacaaataatatccaattgtgagcactatcttgactcacctaacaaccaaacaaattg---aaagcg 525  Q
    ||||||| |||||| ||| || ||||| ||||||||| | ||   ||||||||||  |||||||||||||||| ||||| |||||||||||   ||| ||    
T  6530643 caaacaaccaaattgtgaacatttgactcaccaaacagacaaa--ccaattgtgaatactatcttgactcacccaacaatcaaacaaattgaacaaaacg 6530546  T
Q  526 aatccaaatcaaaccaaactgaaccaaacgaacca 560  Q
    ||||||||||||||  ||| |||||||| ||||||    
T  6530545 aatccaaatcaaactgaacggaaccaaatgaacca 6530511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 15623084 - 15623145
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    |||||||||  ||| ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  15623084 gaagaatcagtagggggagaagaaacaaaattgtgagcactcaactcaccaaacaaccaaat 15623145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 378
Target Start/End: Original strand, 46963788 - 46963887
Alignment:
Q  280 caatcaatcaaaagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaa 377  Q
    |||||||| | |||||| ||||||||   |||||||||||||||||||| |  ||||||||||||||||| |||||||| | |||||||||||||| |||    
T  46963788 caatcaatgagaagaataaaaaggggagaagaaaccaaattgtgagcac-atgctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaa 46963886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 15623238 - 15623306
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgag 263  Q
    |||||| ||| ||||||||||||||||||||||||||| ||  | ||||||||||||||||||| ||||    
T  15623238 tgtgagaactagactcaccaaacaaccaaattgaagaaccagtacggggagaagaaaccaaattgtgag 15623306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 44338376 - 44338318
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  44338376 gaagaatcaaaagg-ggagaagaaaccaaattgtgagcacacg-ctcaccaaacaaccaaa 44338318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 44338468 - 44338410
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  44338468 gaagaatcaaaagg-ggagaagaaaccaaattgtgagcacacg-ctcaccaaacaaccaaa 44338410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 11828263 - 11828324
Alignment:
Q  14 catcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaaca 75  Q
    ||||||||| ||||||||||||| |||||||||||||||||||  |||||| || |||||||    
T  11828263 catcaatcaaccaaagagagaaaccatccaagtagaagaaccaagtcaaaccaatccaaaca 11828324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 21813896 - 21813823
Alignment:
Q  363 tcaccaaacaaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaa 436  Q
    ||||||| |||||||| |||||||||   | |||||||||||| ||||||||||||| ||||||| ||||||||    
T  21813896 tcaccaagcaaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcacttgactcaccaaacaaa 21813823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 21813887 - 21813850
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21813887 aaccaaattgtgagcactcgactcaccaaacaaccaaa 21813850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 10236835 - 10236744
Alignment:
Q  25 caaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaa--attggtagggagaagcaaccatatagaagaaccaat 114  Q
    |||||||| |||||||||||  | ||||||||  |||||| || ||||||||||  |  | |||||||||||||||||||||||||||||||    
T  10236835 caaagagaaaaatcatccaaacaaaagaaccaagtcaaacaaatccaaacaaaagaaccgctagggagaagcaaccatatagaagaaccaat 10236744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 46963778 - 46963856
Alignment:
Q  148 gggagaagtgcaatca----gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    ||||||||||||||||    ||||||| |||||| |||||||||||||||||||||||||  | |||||||||||||||||    
T  46963778 gggagaagtgcaatcaatgagaagaataaaaagg-ggagaagaaaccaaattgtgagcacatg-ctcaccaaacaaccaaa 46963856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 15623192 - 15623238
Alignment:
Q  179 ggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  15623192 ggagaagaaacaaaattgtgagcactcaactcaccaaacaatcaaat 15623238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 24486819 - 24486985
Alignment:
Q  15 atcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaaccaat 114  Q
    ||||| ||| |||||||||||| |||||||  ||||||||||||| || ||||||||||| || || | |||||| || |||||||| |||| |  ||||    
T  24486819 atcaaccaggcaaagagagaaaccatccaataagaagaaccatttaaagctaaaccaaac-aagatcgatagggaaaaacaaccatacagaaaagtcaat 24486917  T
Q  115 cgagagaaaaacaaccaa--agaatcatcaaaagtgggagaagt----gcaatcagaagaatcaaaagga 178  Q
      || |  ||||||||||  |||||||||||||| || ||||||     |||||||||||||||||||||    
T  24486918 --agtgggaaacaaccaaacagaatcatcaaaaggggtagaagtacaatcaatcagaagaatcaaaagga 24486985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 11828572 - 11828615
Alignment:
Q  181 agaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||||||||| |||  ||||||||||||||||||    
T  11828572 agaagaaaccaaattgtgagtacttaactcaccaaacaaccaaa 11828615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 15623009 - 15623052
Alignment:
Q  182 gaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    ||||||||| ||| |||||||| |||||||||||||||||||||    
T  15623009 gaagaaaccgaatcgtgagcacacgactcaccaaacaaccaaat 15623052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 728 - 798
Target Start/End: Original strand, 24487454 - 24487524
Alignment:
Q  728 acaattttgcagacattgagaagactagttaccaatgccatgttatcacaacaatgaagcctactaactcc 798  Q
    |||||||| ||||||  ||||||||||| ||| |||  ||||||  |||||||| ||||||||||||||||    
T  24487454 acaattttacagacaacgagaagactagatacaaatatcatgttgccacaacaaagaagcctactaactcc 24487524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 310
Target Start/End: Complemental strand, 26403183 - 26403153
Alignment:
Q  280 caatcaatcaaaagaatcaaaagggggagaa 310  Q
    |||||||||||||||||||||||||||||||    
T  26403183 caatcaatcaaaagaatcaaaagggggagaa 26403153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 310
Target Start/End: Complemental strand, 44338684 - 44338654
Alignment:
Q  280 caatcaatcaaaagaatcaaaagggggagaa 310  Q
    |||||||||||||||||||||||||||||||    
T  44338684 caatcaatcaaaagaatcaaaagggggagaa 44338654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 21813943 - 21813878
Alignment:
Q  162 cagaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    |||||||||||||||| |||||| ||||||||||||| | |||    ||||||| |||||||||||    
T  21813943 cagaagaatcaaaagggggagaaaaaaccaaattgtgggtacttatttcaccaagcaaccaaattg 21813878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 24487013 - 24487054
Alignment:
Q  142 aaaagtgggagaagtgcaatcagaagaatcaaaaggaggaga 183  Q
    ||||||| |||||||||||||| ||||||||| |||||||||    
T  24487013 aaaagtgagagaagtgcaatcaaaagaatcaataggaggaga 24487054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 24487088 - 24487125
Alignment:
Q  190 caaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  24487088 caaattgtgagaacttgactcaccaaacaaccaaattg 24487125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 834 - 878
Target Start/End: Original strand, 24487555 - 24487600
Alignment:
Q  834 taccttcaccattagaaatt-tatcggtctcccaatcaaaacaaaa 878  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||    
T  24487555 taccttcaccactagatattctatcggtctcccaatcaaaacaaaa 24487600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 6e-49; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 330 - 593
Target Start/End: Original strand, 1173541 - 1173809
Alignment:
Q  330 actcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatc 429  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||||||||| | |||| ||   | |||||||||||  ||| | |||||||  ||| || |    
T  1173541 actcaccaaacaaacaacatgtgagcactagactcaccaaacaaccaaaatatgagtactcgactcaccaaacaaacaaattatgagcactcgacccacc 1173640  T
Q  430 aaacaaacaaattatgagcacttgacccaccaaacaaataa--tatccaattgtgagcactatcttgactcacctaacaaccaaacaaattga---aagc 524  Q
    |||||||||||||||||||||||||||||||||||||| ||   | |||||| |||| ||||||||||||||||||||||||||||||||| |   || |    
T  1173641 aaacaaacaaattatgagcacttgacccaccaaacaaacaaacaaaccaattttgagaactatcttgactcacctaacaaccaaacaaatttaatcaaac 1173740  T
Q  525 gaatccaaatcaaaccaaactgaaccaaacgaaccatgcaaagacaaattgacgaaccaatatgaacca 593  Q
    ||| |||||||||||  |||  |||||||||| ||| || || ||||||||| ||||| ||||||||||    
T  1173741 gaaaccaaatcaaactgaaccaaaccaaacgagccaagcgaaaacaaattgatgaacccatatgaacca 1173809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 291 - 521
Target Start/End: Original strand, 38584083 - 38584322
Alignment:
Q  291 aagaatcaaaagggggagaaac---caaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagca 387  Q
    |||||||||||||||||||||    |||||||||||||   ||||||||||||||||||| |||||| |||  ||||||||||| |||||| ||||||||    
T  38584083 aagaatcaaaagggggagaaaaaatcaaattgtgagcatttaactcaccaaacaaccaaattgtgagcacttaactcaccaaactaccaaattgtgagca 38584182  T
Q  388 cctaattc----accaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaa---ataatatccaattg 480  Q
    | | | ||    |||||||||| ||| |||||||||  |||||| ||||||| |||||| ||||  ||| |||||||||||||   |  | | | |||||    
T  38584183 cttgactcaccaaccaaacaaccaaaatgtgagcactcgactcaccaaacaagcaaattgtgagtgctt-acccaccaaacaaacgaacaaaccaaattg 38584281  T
Q  481 tgagcactatcttgactcacctaacaaccaaacaaattgaa 521  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  38584282 tgagcactattttgactcacccaacaaccaaacaaattgaa 38584322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 291 - 467
Target Start/End: Original strand, 1173469 - 1173647
Alignment:
Q  291 aagaatcaaaagggggagaa---accaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagca 387  Q
    |||||||||||||| |||||   |||||||||||||||| | |||||||||||||||||| ||||||  ||  ||||||||||||| |||  ||||||||    
T  1173469 aagaatcaaaagggcgagaagaaaccaaattgtgagcactagactcaccaaacaaccaaagtgtgagcgctt-actcaccaaacaaacaacatgtgagca 1173567  T
Q  388 cctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaa 467  Q
    |   | |||||||||||| ||| | |||| ||  |||||| ||||||||||||||||||||||| |||||||||||||||    
T  1173568 ctagactcaccaaacaaccaaaatatgagtactcgactcaccaaacaaacaaattatgagcactcgacccaccaaacaaa 1173647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 1173447 - 1173523
Alignment:
Q  206 gactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||  || ||||||||||    
T  1173447 gactcaccaaacaaccaaattgaagaatcaaaagggcgagaagaaaccaaattgtgagcactagactcaccaaacaa 1173523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 1173343 - 1173430
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||  || ||||||||||    
T  1173343 tgtgagaactagactcaccaaacaaccaaattgaataatcaaaagggggagaagaaaccaaattgtgtgcactagactcaccaaacaa 1173430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 394 - 521
Target Start/End: Complemental strand, 8986262 - 8986129
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat------atccaattgtgagcac 487  Q
    |||||||||||| |||||||||| |   |||||| ||||||| |||||||||||  |||||||||||||||||| ||       | ||||||||||||||    
T  8986262 tcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaattatgagttcttgacccaccaaacaaacaaatgaacaaaccaattgtgagcac 8986163  T
Q  488 tatcttgactcacctaacaaccaaacaaattgaa 521  Q
    ||| |||||||||| |||||||||||||||||||    
T  8986162 tattttgactcacccaacaaccaaacaaattgaa 8986129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 281 - 378
Target Start/End: Original strand, 1173273 - 1173372
Alignment:
Q  281 aatcaatcaaaagaatcaaaagggggagaa---accaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaa 377  Q
    ||||||||  ||||||||||||||||||||   ||||||||||||||||   |||||| |||||| |||| |||||||||||||||||||||||||||||    
T  1173273 aatcaatcccaagaatcaaaagggggagaagaaaccaaattgtgagcactcgactcactaaacaatcaaa-tgtgagaactagactcaccaaacaaccaa 1173371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 1173379 - 1173465
Alignment:
Q  294 aatcaaaagggggagaa---accaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||||   ||||||||||| |||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  1173379 aatcaaaagggggagaagaaaccaaattgtgtgcactagactcaccaaacaacc-aaatgtgagaattagactcaccaaacaaccaaa 1173465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 1173283 - 1173343
Alignment:
Q  165 aagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  1173283 aagaatcaaaagggggagaagaaaccaaattgtgagcactcgactcactaaacaatcaaat 1173343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 1173468 - 1173528
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  1173468 gaagaatcaaaagggcgagaagaaaccaaattgtgagcactagactcaccaaacaaccaaa 1173528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 8986603 - 8986555
Alignment:
Q  127 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaa 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8986603 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaa 8986555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 1173379 - 1173436
Alignment:
Q  168 aatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  1173379 aatcaaaagggggagaagaaaccaaattgtgtgcactagactcaccaaacaaccaaat 1173436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 38584074 - 38584145
Alignment:
Q  156 tgcaatcagaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    |||||| ||||||||||||||| |||||| ||| ||||||||||||| |  |||||||||||||||||||||    
T  38584074 tgcaattagaagaatcaaaagggggagaaaaaatcaaattgtgagcatttaactcaccaaacaaccaaattg 38584145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 1173171 - 1173214
Alignment:
Q  126 caaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaa 169  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  1173171 caaccaaagaatcatcaaaagtggaagaagtgcaatcagaagaa 1173214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 8986286 - 8986216
Alignment:
Q  307 agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||||||| |  ||||||||||||||||| |||||||| | |||||||||||||| ||||    
T  8986286 agaaaccaaattgtgagcac-atgctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaa 8986216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 1173283 - 1173341
Alignment:
Q  228 aagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaatcaa 286  Q
    ||||||||||||||||||||||||||||||| ||||||||  || ||| ||||||||||    
T  1173283 aagaatcaaaagggggagaagaaaccaaattgtgagcactcgactcactaaacaatcaa 1173341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 32290863 - 32290827
Alignment:
Q  141 caaaagtgggagaagtgcaatcagaagaatcaaaagg 177  Q
    |||||||||||||||||||||||||||||||||||||    
T  32290863 caaaagtgggagaagtgcaatcagaagaatcaaaagg 32290827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 2484744 - 2484652
Alignment:
Q  24 ccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaa--aattggtagggagaagcaaccatatagaagaaccaat 114  Q
    ||||||||||||| ||||||| || ||||||||  |||||| ||||||||||||  ||  || |  ||||||||||| |||||||||||||||    
T  2484744 ccaaagagagaaaccatccaaataaaagaaccaagtcaaaccaaaccaaacaaaataaccggcattgagaagcaaccttatagaagaaccaat 2484652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 32290642 - 32290565
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaa----caaattatgagcacttgacccaccaaacaaa 467  Q
    |||||||||||| ||| ||||||||| |||| || |||| |||    |||||| ||||||||||||||||||||||||    
T  32290642 tcaccaaacaaccaaattgtgagcacttgacccaccaaaaaaataaccaaattgtgagcacttgacccaccaaacaaa 32290565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 422 - 470
Target Start/End: Complemental strand, 32290645 - 32290597
Alignment:
Q  422 gactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataa 470  Q
    |||||| ||||||| |||||| |||||||||||||||||||| ||||||    
T  32290645 gactcaccaaacaaccaaattgtgagcacttgacccaccaaaaaaataa 32290597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 38584202 - 38584242
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  38584202 aaccaaaatgtgagcactcgactcaccaaacaagcaaattg 38584242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 38584082 - 38584137
Alignment:
Q  227 gaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    ||||||||||||||||||||| ||| |||||| |||||| || || ||||||||||    
T  38584082 gaagaatcaaaagggggagaaaaaatcaaattgtgagcatttaactcaccaaacaa 38584137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 32290598 - 32290556
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattgaa 229  Q
    |||||||||||||||||| ||| |||||||||| |||||||||    
T  32290598 aaccaaattgtgagcacttgacccaccaaacaaacaaattgaa 32290556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 6e-43; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 394 - 593
Target Start/End: Complemental strand, 9511854 - 9511654
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataatatccaattgtgagcactatctt 493  Q
    |||||||||||| ||| |||||||||  |||||| ||||||| | || | |||||||| ||| ||||||||||| ||   | ||||||||| ||||||||    
T  9511854 tcaccaaacaaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaa--cgaattgtgaggactatctt 9511757  T
Q  494 gactcacctaacaaccaaacaaattgaa---agcgaatccaaatcaaaccaaactgaaccaaacgaaccatgcaaagacaaattgacgaaccaatatgaa 590  Q
     |||||||||||||||||||||||| ||   ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| || ||    
T  9511756 aactcacctaacaaccaaacaaattcaaccaagcgaatccaaatcaaaccgaactgaaccacacgaaccatgcaaagacaaattgacgaaacaaaattaa 9511657  T
Q  591 cca 593  Q
    |||    
T  9511656 cca 9511654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 195 - 378
Target Start/End: Complemental strand, 24137075 - 24136891
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaatcaatcaaaaga 294  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||  || |||||||||| |||    ||||    
T  24137075 tgtgagaactagactcaccaaacaaccaaattgaagaatcaaa-gggggagaagaaaccaaattgtgagaactagactcaccaaacaaccaaattgaaga 24136977  T
Q  295 atcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||| |||||||  |||||| |||||||||||||   |||||||||||||||||| |||||||| | | |||||||||||||||||    
T  24136976 atcagaaggggggaagaaacaaaattgtgagcactcgactcaccaaacaaccaaattgtgagaagtcggctcaccaaacaaccaaa 24136891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 24137043 - 24136927
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgag 263  Q
    ||||||||||| || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||||    
T  24137043 gaagaatcaaaggg-ggagaagaaaccaaattgtgagaactagactcaccaaacaaccaaattgaagaatcagaaggggg-gaagaaacaaaattgtgag 24136946  T
Q  264 cacttcacccaccaaacaa 282  Q
    ||||  || ||||||||||    
T  24136945 cactcgactcaccaaacaa 24136927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 394 - 521
Target Start/End: Original strand, 11335415 - 11335537
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataatatccaattgtgagcactatctt 493  Q
    |||||||||||| |||||||||| || |  | || |||||||||||||| |||||||||||||| ||||||||| |  | ||||||||||||||||||||    
T  11335415 tcaccaaacaaccaaagtgtgagtactt--cccaccaaacaaacaaattgtgagcacttgacccgccaaacaaaca--aaccaattgtgagcactatctt 11335510  T
Q  494 gactcacctaacaaccaaacaaattgaa 521  Q
    |||||||| |||||||||||||||||||    
T  11335511 gactcacc-aacaaccaaacaaattgaa 11335537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 11335364 - 11335430
Alignment:
Q  158 caatcagaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  11335364 caatcaaaagaatcaaaagggggagaagaaaccaaattgtgagcattcgactcaccaaacaaccaaa 11335430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 309 - 378
Target Start/End: Complemental strand, 24137114 - 24137046
Alignment:
Q  309 aaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24137114 aaaccaaattgtgagcactcaactcaccaaacaaccaaa-tgtgagaactagactcaccaaacaaccaaa 24137046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 290 - 404
Target Start/End: Complemental strand, 9511899 - 9511782
Alignment:
Q  290 aaagaatcaaaaggggga---gaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagc 386  Q
    ||||||||||||||||||   |||| ||||||||||| |   ||||||||||||||||||| |||||| ||| |||||||||||||||| ||||||||||    
T  9511899 aaagaatcaaaagggggataagaaatcaaattgtgagtatttaactcaccaaacaaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagc 9511800  T
Q  387 acctaattcaccaaacaa 404  Q
    ||   | |||||||||||    
T  9511799 actcgactcaccaaacaa 9511782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 24137268 - 24137213
Alignment:
Q  129 ccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaaggaggagaa 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24137268 ccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaagggggagaa 24137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 9512263 - 9512187
Alignment:
Q  38 catccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaaccaat 114  Q
    |||||||||||||||  |||||| ||||||||||||||| ||| |||||| ||||||||||||| ||||||||||||    
T  9512263 catccaagtagaagagtcatttcgaactaaaccaaacaagaatcggtaggaagaagcaaccatacagaagaaccaat 9512187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 9512116 - 9512063
Alignment:
Q  131 aaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaaggaggagaa 184  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9512116 aaagaatcatcaaaagtgggagaagtgcaatcaaaagaatcaaaagggggagaa 9512063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 281 - 388
Target Start/End: Original strand, 11335361 - 11335469
Alignment:
Q  281 aatcaatcaaaagaatcaaaaggggg---agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaa 377  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||    |||||||||||||||||| |||||| |||   | |||||||||| |||    
T  11335361 aatcaatcaaaagaatcaaaagggggagaagaaaccaaattgtgagcattcgactcaccaaacaaccaaagtgtgagtact--tcccaccaaacaaacaa 11335458  T
Q  378 agtgtgagcac 388  Q
    | |||||||||    
T  11335459 attgtgagcac 11335469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 24136981 - 24136919
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    ||||||||| |||| || |||||||| |||||||||||||||||||||||||||||||||||||    
T  24136981 gaagaatcagaaggggg-gaagaaacaaaattgtgagcactcgactcaccaaacaaccaaattg 24136919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 24136928 - 24136876
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaag 239  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||||||||||    
T  24136928 aaccaaattgtgagaagtcggctcaccaaacaaccaaattgaagaatcaaaag 24136876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 24137163 - 24137075
Alignment:
Q  141 caaaagtgggagaagtgcaatc----agaagaatcaaaaggagg-agaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    |||||| |||||||||||||||    ||||||| ||||||| || |||| |||||||||||||||||||| |||||||||||||||||||    
T  24137163 caaaagggggagaagtgcaatctattagaagaaccaaaaggggggagaa-aaaccaaattgtgagcactcaactcaccaaacaaccaaat 24137075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 9511856 - 9511777
Alignment:
Q  361 actcaccaaacaaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaa 440  Q
    |||||||||||||||||| |||||||||   | ||||||||||||  ||||||||||||  |||||| ||||||||||||    
T  9511856 actcaccaaacaaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaa 9511777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 474 - 521
Target Start/End: Complemental strand, 24136772 - 24136725
Alignment:
Q  474 ccaattgtgagcactatcttgactcacctaacaaccaaacaaattgaa 521  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  24136772 ccaattgtgagcactattttgactcacccaacaaccaaacaaattgaa 24136725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 9511845 - 9511777
Alignment:
Q  310 aaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||||   ||||||||||||||| || |||||| ||| |||||||||||||| ||||    
T  9511845 aaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaa 9511777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 221
Target Start/End: Complemental strand, 9511845 - 9511811
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaacc 221  Q
    |||||||||||||||||||||||||||||||||||    
T  9511845 aaccaaattgtgagcactcgactcaccaaacaacc 9511811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 9511898 - 9511836
Alignment:
Q  165 aagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    ||||||||||||| ||| |||||| ||||||||||| | |  |||||||||||||||||||||    
T  9511898 aagaatcaaaagggggataagaaatcaaattgtgagtatttaactcaccaaacaaccaaattg 9511836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 11335371 - 11335425
Alignment:
Q  228 aagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    ||||||||||||||||||||||||||||||| |||||| |  || ||||||||||    
T  11335371 aagaatcaaaagggggagaagaaaccaaattgtgagcattcgactcaccaaacaa 11335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 378
Target Start/End: Complemental strand, 24136855 - 24136808
Alignment:
Q  331 ctcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    ||||||||||||||| |||||||||||| |||||||| ||||| ||||    
T  24136855 ctcaccaaacaaccataatgtgagaactcgactcacccaacaagcaaa 24136808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 8e-33; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 16462781 - 16462689
Alignment:
Q  22 agccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaaccaat 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||    
T  16462781 agccaaagagagaaatcatccaagcagaagaaccatttcaaactaaaccaaacaagaattggtagggagaagcaatcatacaaaagaaccaat 16462689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 280 - 378
Target Start/End: Complemental strand, 42530835 - 42530736
Alignment:
Q  280 caatcaatcaaaagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaa 377  Q
    |||||||||| |||||||||||||||   |||||||||||||||||||| |  ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  42530835 caatcaatcagaagaatcaaaaggggagaagaaaccaaattgtgagcac-acgctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaaccaa 42530737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 361 - 521
Target Start/End: Complemental strand, 50295636 - 50295478
Alignment:
Q  361 actcaccaaacaaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccacc 460  Q
    ||||||||||||| ||||||  ||| ||  || ||||||||||||  ||||||||||||  ||||||  |||||| |||||| ||||||||||||||||     
T  50295636 actcaccaaacaatcaaagtacgagaactcaactcaccaaacaacccaagtgtgagcactcgactcacgaaacaaccaaattgtgagcacttgacccact 50295537  T
Q  461 aaacaaataatatccaattgtgagcactatcttgactcacctaacaaccaaacaaattgaa 521  Q
    ||||||| |  ||| ||||||| |||||||||  ||||| | |||||||||||||||||||    
T  50295536 aaacaaaca--atcaaattgtgtgcactatctcaactcatccaacaaccaaacaaattgaa 50295478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 46692012 - 46692099
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||  || ||||||||||    
T  46692012 tgtgagaactagactcaccaaaccaccaaattgaagaatcaaaagggagagaagaaaccaaattgtgagcactcgactcaccaaacaa 46692099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 50295959 - 50295901
Alignment:
Q  127 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaaggaggagaag 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  50295959 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaagagggagaag 50295901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 46692044 - 46692105
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  46692044 gaagaatcaaaagggagagaagaaaccaaattgtgagcactcgactcaccaaacaactaaat 46692105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 46692045 - 46692141
Alignment:
Q  291 aagaatcaaaagggggagaa---accaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgag 385  Q
    |||||||||||||| |||||   ||||||||||||||||   |||||||||||||| ||| |||||||| ||||||||||||||||||||| ||||||    
T  46692045 aagaatcaaaagggagagaagaaaccaaattgtgagcactcgactcaccaaacaactaaa-tgtgagaattagactcaccaaacaaccaaattgtgag 46692141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 42530831 - 42530767
Alignment:
Q  158 caatcagaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  42530831 caatcagaagaatcaaaagg-ggagaagaaaccaaattgtgagcacacg-ctcaccaaacaaccaaa 42530767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 42531051 - 42531001
Alignment:
Q  127 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaagg 177  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42531051 aaccaaagaatcattaaaagtgggagaagtgcaatcagaagaatcaaaagg 42531001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 46691878 - 46691928
Alignment:
Q  127 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaagg 177  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46691878 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaattaaaagg 46691928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 293 - 439
Target Start/End: Complemental strand, 50295677 - 50295527
Alignment:
Q  293 gaatcaaaaggggg----agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagcac 388  Q
    ||||||||||||||    |||||||||||| |||| ||  |||||||||||||| |||| |  |||||||  ||||||||||||||| ||||||||||||    
T  50295677 gaatcaaaaggggggagaagaaaccaaattatgagtacttaactcaccaaacaatcaaagtacgagaactcaactcaccaaacaacccaagtgtgagcac 50295578  T
Q  389 ctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaa 439  Q
       | |||| ||||||| ||| ||||||||| |||| ||  ||||||||||    
T  50295577 tcgactcacgaaacaaccaaattgtgagcacttgacccactaaacaaacaa 50295527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 42530773 - 42530722
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaa 238  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  42530773 aaccaaagtgtgagaactcgactcaccaaacaaccaaattaaagaatcaaaa 42530722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 46691942 - 46692012
Alignment:
Q  156 tgcaatcagaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcacc-aaacaaccaaat 225  Q
    ||||||||||||||| |||| |   ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  46691942 tgcaatcagaagaataaaaaaggaaagaagaaaccaaattgtgaacactcgactcaccaaaacaaccaaat 46692012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 50295677 - 50295620
Alignment:
Q  230 gaatcaaaaggggg-agaagaaaccaaattatgagcacttcacccaccaaacaatcaa 286  Q
    |||||||||||||| |||||||||||||||||||| |||| || ||||||||||||||    
T  50295677 gaatcaaaaggggggagaagaaaccaaattatgagtacttaactcaccaaacaatcaa 50295620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 46691970 - 46692041
Alignment:
Q  307 agaaaccaaattgtgagcaccaaactcacc-aaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||| |||   ||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  46691970 agaaaccaaattgtgaacactcgactcaccaaaacaacc-aaatgtgagaactagactcaccaaaccaccaaa 46692041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 411 - 450
Target Start/End: Original strand, 2593560 - 2593599
Alignment:
Q  411 tgtgagcacctgactcatcaaacaaacaaattatgagcac 450  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  2593560 tgtgagcacttgactcatcaaacaaacaaattatgagcac 2593599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 7e-24; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 15629922 - 15629990
Alignment:
Q  156 tgcaatcagaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15629922 tgcaatcagaagaatcataagg-ggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 15629990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 372 - 521
Target Start/End: Original strand, 2072369 - 2072519
Alignment:
Q  372 aaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat 471  Q
    ||||||| |||||| || ||| |||||||||||| ||||| |||||||  |||||||||||||| |||||| ||||||  | ||||||| | |||| |||    
T  2072369 aaccaaattgtgagtacataactcaccaaacaaccaaagtatgagcactcgactcatcaaacaatcaaattgtgagca-atcacccacccaccaaacaat 2072467  T
Q  472 --atccaattgtgagcactatcttgactcacctaacaaccaaacaaattgaa 521  Q
      | ||||| |||||| ||||||||||||||| |||||| ||||||||||||    
T  2072468 caaaccaatggtgagccctatcttgactcacccaacaactaaacaaattgaa 2072519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 15630022 - 15630081
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15630022 gaagaatcaaaagg-ggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 15630081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 372 - 521
Target Start/End: Original strand, 2075899 - 2076049
Alignment:
Q  372 aaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat 471  Q
    ||||||| |||||| || ||| |||||||||||| ||||| |||||||  ||||| |||||||| |||||| ||||||  | ||||||| | |||| |||    
T  2075899 aaccaaattgtgagtacataactcaccaaacaaccaaagtatgagcactcgactcgtcaaacaaccaaattgtgagca-atcacccacccaccaaacaat 2075997  T
Q  472 --atccaattgtgagcactatcttgactcacctaacaaccaaacaaattgaa 521  Q
      | ||||| |||||| ||||||||||||||| |||||| ||||||||||||    
T  2075998 taaaccaatggtgagccctatcttgactcacccaacaactaaacaaattgaa 2076049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 15630001 - 15630076
Alignment:
Q  206 gactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcacttcacccaccaaacaa 282  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  || ||||||||||    
T  15630001 gactcactaaacaaccaaattgaagaatcaaaa-ggggagaagaaaccaaattgtgagcactcgactcaccaaacaa 15630076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 284 - 378
Target Start/End: Original strand, 15629924 - 15630019
Alignment:
Q  284 caatcaaaagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||| |||||||| ||||||   ||||||||||||||||||||   ||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  15629924 caatcagaagaatcataaggggagaagaaaccaaattgtgagcactcgactcaccaaacaacc-aaatgtgagaattagactcactaaacaaccaaa 15630019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 15630023 - 15630107
Alignment:
Q  291 aagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaa 373  Q
    |||||||||||||||   ||||||||||||||||||||   |||||||||||||||||| |||||| ||| ||||||||||||||    
T  15630023 aagaatcaaaaggggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcactcgactcaccaaacaa 15630107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 315 - 388
Target Start/End: Original strand, 19825091 - 19825164
Alignment:
Q  315 aattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagcac 388  Q
    ||||||||||||  ||||||||||||||||||| |||||| ||| ||||| ||||||||||||| |||||||||    
T  19825091 aattgtgagcacttaactcaccaaacaaccaaattgtgagcactcgactcgccaaacaaccaaattgtgagcac 19825164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 305 - 387
Target Start/End: Original strand, 2072364 - 2072446
Alignment:
Q  305 ggagaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagca 387  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| | |||| ||| |||||| ||||||| |||| ||||||||    
T  2072364 ggagaaaccaaattgtgagtacataactcaccaaacaaccaaagtatgagcactcgactcatcaaacaatcaaattgtgagca 2072446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 305 - 387
Target Start/End: Original strand, 2075894 - 2075976
Alignment:
Q  305 ggagaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagca 387  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| | |||| ||| |||||  |||||||||||| ||||||||    
T  2075894 ggagaaaccaaattgtgagtacataactcaccaaacaaccaaagtatgagcactcgactcgtcaaacaaccaaattgtgagca 2075976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 15629787 - 15629835
Alignment:
Q  127 aaccaaagaatcatcaaaagtgggagaagtgcaatcagaagaatcaaaa 175  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  15629787 aaccaaaaaatcatcaaaagttggagaagtgcaatcagaagaatcaaaa 15629835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 380 - 508
Target Start/End: Original strand, 19825094 - 19825223
Alignment:
Q  380 tgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataa--tatccaa 477  Q
    ||||||||| ||| |||||||||||| ||| |||||||||  |||||  ||||||| |||||| ||||||||| || |||||| |||| ||   | | ||    
T  19825094 tgtgagcacttaactcaccaaacaaccaaattgtgagcactcgactcgccaaacaaccaaattgtgagcactt-actcaccaaccaaacaaacaaacaaa 19825192  T
Q  478 ttgtgagcactatcttgactcacctaacaac 508  Q
    ||||||||| |||||||||||||| ||||||    
T  19825193 ttgtgagcattatcttgactcaccaaacaac 19825223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 19825117 - 19825157
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattg 227  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  19825117 aaccaaattgtgagcactcgactcgccaaacaaccaaattg 19825157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 341 - 404
Target Start/End: Original strand, 15630044 - 15630107
Alignment:
Q  341 aaccaaaatgtgagaactagactcaccaaacaaccaaagtgtgagcacctaattcaccaaacaa 404  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||||||   | |||||||||||    
T  15630044 aaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcactcgactcaccaaacaa 15630107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 1e-22; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 20242093 - 20242015
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  20242093 aaccaaagtgtgagaactcgactcaccaaaccaccaaattgaagaatcaaaa-ggggagaagaaaccaaattgtgagcac 20242015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 20250974 - 20251052
Alignment:
Q  187 aaccaaattgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  20250974 aaccaaagtgtgagaactcgactcaccaaaccaccaaattgaagaatcaaaa-ggggagaagaaaccaaattgtgagcac 20251052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 20242177 - 20242107
Alignment:
Q  195 tgtgagcactcgactcaccaaacaaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  20242177 tgtgagaactctactcaccaaacaaccaaattgaagaatcaaaa-ggggagaagaaaccaaattgtgagcac 20242107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 20242052 - 20241964
Alignment:
Q  291 aagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||   |||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  20242052 aagaatcaaaaggggagaagaaaccaaattgtgagcac-acgctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaa 20241964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 20251015 - 20251103
Alignment:
Q  291 aagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||   |||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  20251015 aagaatcaaaaggggagaagaaaccaaattgtgagcac-acgctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaa 20251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 394 - 521
Target Start/End: Complemental strand, 20242010 - 20241882
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat--atccaattgtgagcactatc 491  Q
    |||||||||||| ||| |||||| ||  |||||| ||||||| |||||||||||  || |||||||||||||||  |   | | |||||||||||||||     
T  20242010 tcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaattatgagtgct-gacccaccaaacaaacgaacaaactaattgtgagcactatt 20241912  T
Q  492 ttgactcacctaacaaccaaacaaattgaa 521  Q
    |||||||||| |||||||||||||||||||    
T  20241911 ttgactcacccaacaaccaaacaaattgaa 20241882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 20242144 - 20242056
Alignment:
Q  291 aagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||   |||||||||||||||||||| |  ||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  20242144 aagaatcaaaaggggagaagaaaccaaattgtgagcac-acgctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaaa 20242056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 20250923 - 20251011
Alignment:
Q  291 aagaatcaaaaggggg--agaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    |||||||||||||||   |||||||||||||||||||| |  ||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  20250923 aagaatcaaaaggggagaagaaaccaaattgtgagcac-acgctcaccaaacaaccaaagtgtgagaactcgactcaccaaaccaccaaa 20251011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 394 - 521
Target Start/End: Original strand, 20251057 - 20251185
Alignment:
Q  394 tcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaaataat--atccaattgtgagcactatc 491  Q
    |||||||||||| ||| |||||| ||  |||||| ||||||| |||||||||||  || |||||||||||||||  |   | | |||||||||||||||     
T  20251057 tcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaattatgagtgct-gacccaccaaacaaacgaacaaactaattgtgagcactatt 20251155  T
Q  492 ttgactcacctaacaaccaaacaaattgaa 521  Q
    |||||||||| |||||||||||||||||||    
T  20251156 ttgactcacccaacaaccaaacaaattgaa 20251185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 20242238 - 20242177
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaat 225  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||||    
T  20242238 gaagaatcaaaagggggagaagaaaccaaattgtgagcacactactcaccagacaaccaaat 20242177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 20242237 - 20242148
Alignment:
Q  291 aagaatcaaaagggggagaa---accaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaaccaaa 378  Q
    ||||||||||||||||||||   ||||||||||||||||   |||||||| ||||||||| ||||||||||  ||||||||||||||||||    
T  20242237 aagaatcaaaagggggagaagaaaccaaattgtgagcacactactcaccagacaaccaaa-tgtgagaactctactcaccaaacaaccaaa 20242148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 20242247 - 20242199
Alignment:
Q  218 aaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20242247 aaccaaattgaagaatcaaaagggggagaagaaaccaaattgtgagcac 20242199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 20242053 - 20241995
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  20242053 gaagaatcaaaagg-ggagaagaaaccaaattgtgagcacacg-ctcaccaaacaaccaaa 20241995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 20242145 - 20242087
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  20242145 gaagaatcaaaagg-ggagaagaaaccaaattgtgagcacacg-ctcaccaaacaaccaaa 20242087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 20250922 - 20250980
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  20250922 gaagaatcaaaagg-ggagaagaaaccaaattgtgagcacacg-ctcaccaaacaaccaaa 20250980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 20251014 - 20251072
Alignment:
Q  164 gaagaatcaaaaggaggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 224  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  20251014 gaagaatcaaaagg-ggagaagaaaccaaattgtgagcacacg-ctcaccaaacaaccaaa 20251072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 20250913 - 20250960
Alignment:
Q  218 aaccaaattgaagaatcaaaagggggagaagaaaccaaattatgagcac 266  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  20250913 aaccaaattgaagaatcaaaa-ggggagaagaaaccaaattgtgagcac 20250960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 310
Target Start/End: Complemental strand, 20242361 - 20242331
Alignment:
Q  280 caatcaatcaaaagaatcaaaagggggagaa 310  Q
    |||||||||||||||||||||||||||||||    
T  20242361 caatcaatcaaaagaatcaaaagggggagaa 20242331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 280 - 310
Target Start/End: Original strand, 20250799 - 20250829
Alignment:
Q  280 caatcaatcaaaagaatcaaaagggggagaa 310  Q
    |||||||||||||||||||||||||||||||    
T  20250799 caatcaatcaaaagaatcaaaagggggagaa 20250829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 7233 - 7329
Alignment:
Q  367 caaacaaccaaagtgtgagcacctaattcaccaaacaactaaagtgtgagcacctgactcatcaaacaaacaaattatgagcacttgacccaccaaacaa 466  Q
    |||||||||||| ||||||||||| | ||||||   ||||||| ||||||||  || |||| ||||||| ||| || |||||||| ||| ||||||||||    
T  7233 caaacaaccaaattgtgagcacctgactcacca---aactaaattgtgagcatttgtctcaacaaacaatcaatttgtgagcactcgactcaccaaacaa 7329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 223
Target Start/End: Original strand, 7304 - 7333
Alignment:
Q  194 ttgtgagcactcgactcaccaaacaaccaa 223  Q
    ||||||||||||||||||||||||||||||    
T  7304 ttgtgagcactcgactcaccaaacaaccaa 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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