View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19911_high_6 (Length: 342)

Name: NF19911_high_6
Description: NF19911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19911_high_6
NF19911_high_6
[»] chr4 (32 HSPs)
chr4 (13-328)||(24062685-24063001)
chr4 (47-174)||(2125926-2126053)
chr4 (47-174)||(35470191-35470318)
chr4 (47-174)||(42776120-42776247)
chr4 (37-136)||(13088592-13088691)
chr4 (32-174)||(29091206-29091348)
chr4 (70-179)||(52493988-52494096)
chr4 (47-143)||(27284539-27284635)
chr4 (17-161)||(13318498-13318650)
chr4 (76-179)||(42776701-42776804)
chr4 (32-154)||(24705440-24705562)
chr4 (76-174)||(53760696-53760794)
chr4 (47-172)||(46242974-46243099)
chr4 (70-174)||(56339202-56339306)
chr4 (47-145)||(16516270-16516368)
chr4 (76-174)||(46242450-46242548)
chr4 (32-161)||(10354424-10354553)
chr4 (17-179)||(41139537-41139707)
chr4 (70-174)||(40338152-40338256)
chr4 (47-174)||(17727134-17727261)
chr4 (47-114)||(18922449-18922516)
chr4 (47-161)||(4490109-4490223)
chr4 (33-141)||(54566277-54566385)
chr4 (70-145)||(47108378-47108453)
chr4 (80-174)||(40548128-40548222)
chr4 (71-174)||(42775674-42775780)
chr4 (70-145)||(30303819-30303894)
chr4 (70-161)||(52294945-52295036)
chr4 (47-101)||(33915494-33915548)
chr4 (51-141)||(29685957-29686047)
chr4 (80-145)||(17727026-17727091)
chr4 (81-141)||(16300129-16300189)
[»] chr7 (35 HSPs)
chr7 (47-174)||(40495786-40495913)
chr7 (17-158)||(23695991-23696140)
chr7 (47-172)||(14603125-14603250)
chr7 (47-176)||(30524322-30524451)
chr7 (47-174)||(23548474-23548601)
chr7 (47-174)||(28539031-28539158)
chr7 (32-174)||(13814842-13814984)
chr7 (44-174)||(30080661-30080791)
chr7 (47-176)||(40667408-40667537)
chr7 (40-161)||(45967029-45967150)
chr7 (51-174)||(39342509-39342632)
chr7 (48-174)||(3905523-3905649)
chr7 (32-174)||(40495299-40495441)
chr7 (47-172)||(35455875-35456000)
chr7 (17-174)||(22391413-22391577)
chr7 (70-174)||(25189112-25189216)
chr7 (47-179)||(33310868-33311000)
chr7 (47-161)||(26416035-26416149)
chr7 (47-174)||(30629126-30629253)
chr7 (76-174)||(9784823-9784921)
chr7 (81-174)||(23455144-23455237)
chr7 (70-154)||(19865440-19865524)
chr7 (58-174)||(30587777-30587893)
chr7 (40-100)||(34114479-34114539)
chr7 (54-161)||(36328665-36328773)
chr7 (70-161)||(14790195-14790286)
chr7 (80-174)||(42816618-42816712)
chr7 (40-161)||(15990973-15991092)
chr7 (80-174)||(43791159-43791253)
chr7 (81-161)||(32650655-32650735)
chr7 (90-174)||(45984409-45984493)
chr7 (90-174)||(45988769-45988853)
chr7 (70-141)||(18938898-18938969)
chr7 (90-176)||(18926727-18926813)
chr7 (48-101)||(37460771-37460824)
[»] chr1 (36 HSPs)
chr1 (17-174)||(8224837-8225002)
chr1 (17-177)||(41822390-41822550)
chr1 (17-174)||(28632426-28632590)
chr1 (47-174)||(15467840-15467967)
chr1 (47-161)||(52135502-52135616)
chr1 (47-176)||(946441-946570)
chr1 (47-177)||(31166376-31166506)
chr1 (17-174)||(37447198-37447363)
chr1 (17-174)||(44571270-44571435)
chr1 (47-174)||(39887196-39887323)
chr1 (70-177)||(41822597-41822704)
chr1 (47-161)||(21267688-21267801)
chr1 (32-172)||(37036811-37036951)
chr1 (70-174)||(49659285-49659389)
chr1 (40-179)||(10166563-10166701)
chr1 (70-174)||(37448301-37448405)
chr1 (57-174)||(48953637-48953754)
chr1 (70-159)||(49216238-49216327)
chr1 (47-175)||(35491225-35491353)
chr1 (58-161)||(1902143-1902246)
chr1 (47-174)||(34003530-34003657)
chr1 (47-174)||(37447779-37447906)
chr1 (47-177)||(41823037-41823167)
chr1 (76-161)||(13181670-13181755)
chr1 (70-174)||(44570747-44570851)
chr1 (70-174)||(47820282-47820385)
chr1 (40-179)||(51847915-51848053)
chr1 (81-174)||(42230789-42230883)
chr1 (47-161)||(50471832-50471946)
chr1 (47-174)||(32201838-32201965)
chr1 (76-174)||(946982-947080)
chr1 (77-154)||(32128119-32128196)
chr1 (76-171)||(6470592-6470687)
chr1 (47-174)||(23956239-23956366)
chr1 (70-158)||(52280853-52280941)
chr1 (58-174)||(31195525-31195641)
[»] chr3 (43 HSPs)
chr3 (47-179)||(47336945-47337077)
chr3 (47-174)||(48947674-48947801)
chr3 (17-174)||(7976617-7976782)
chr3 (47-174)||(43863827-43863954)
chr3 (47-174)||(53129719-53129846)
chr3 (47-174)||(53470305-53470432)
chr3 (47-177)||(21730967-21731097)
chr3 (51-174)||(671499-671622)
chr3 (32-159)||(26547099-26547226)
chr3 (47-174)||(34088640-34088767)
chr3 (47-174)||(36397865-36397992)
chr3 (47-154)||(46635935-46636042)
chr3 (70-172)||(52527107-52527209)
chr3 (58-161)||(1146832-1146935)
chr3 (70-174)||(2104803-2104907)
chr3 (78-174)||(46706721-46706817)
chr3 (47-174)||(47767501-47767628)
chr3 (52-174)||(21307413-21307535)
chr3 (80-174)||(35279831-35279925)
chr3 (52-161)||(44288340-44288449)
chr3 (47-154)||(31021768-31021876)
chr3 (47-143)||(36635982-36636078)
chr3 (47-174)||(7302415-7302542)
chr3 (80-179)||(26323420-26323519)
chr3 (70-145)||(37054492-37054567)
chr3 (47-145)||(42005829-42005927)
chr3 (76-174)||(55460409-55460507)
chr3 (47-136)||(34396386-34396475)
chr3 (70-154)||(6836958-6837042)
chr3 (70-174)||(38506775-38506879)
chr3 (47-174)||(30766622-30766749)
chr3 (47-161)||(32665966-32666081)
chr3 (76-158)||(20634293-20634375)
chr3 (81-175)||(47284113-47284207)
chr3 (47-140)||(15760358-15760451)
chr3 (47-141)||(28182122-28182215)
chr3 (32-161)||(31189258-31189387)
chr3 (48-161)||(40493151-40493264)
chr3 (70-155)||(48825026-48825111)
chr3 (47-124)||(30767413-30767492)
chr3 (76-144)||(1796135-1796203)
chr3 (110-174)||(30767174-30767238)
chr3 (93-145)||(46199242-46199294)
[»] chr8 (31 HSPs)
chr8 (47-174)||(29257238-29257365)
chr8 (17-174)||(9982705-9982861)
chr8 (47-176)||(40733988-40734117)
chr8 (47-174)||(29482694-29482821)
chr8 (47-142)||(31980370-31980465)
chr8 (47-174)||(33377184-33377311)
chr8 (47-174)||(34008850-34008977)
chr8 (47-174)||(44346565-44346692)
chr8 (17-174)||(15186675-15186831)
chr8 (37-171)||(24063673-24063807)
chr8 (47-142)||(14339-14434)
chr8 (76-174)||(6416253-6416351)
chr8 (65-172)||(1088181-1088289)
chr8 (70-174)||(13144652-13144756)
chr8 (70-174)||(24045029-24045133)
chr8 (76-174)||(26520355-26520453)
chr8 (32-140)||(7668742-7668850)
chr8 (85-177)||(31976507-31976599)
chr8 (47-154)||(24510165-24510271)
chr8 (32-154)||(33986093-33986215)
chr8 (76-154)||(36625141-36625219)
chr8 (32-161)||(7079412-7079541)
chr8 (82-161)||(8049336-8049415)
chr8 (47-161)||(10593153-10593267)
chr8 (70-158)||(33422914-33423003)
chr8 (32-141)||(35404614-35404723)
chr8 (47-119)||(29611484-29611556)
chr8 (110-174)||(34388576-34388640)
chr8 (58-161)||(15718279-15718382)
chr8 (47-145)||(6460773-6460871)
chr8 (78-174)||(28324580-28324676)
[»] chr6 (11 HSPs)
chr6 (47-174)||(8475230-8475357)
chr6 (17-175)||(31412969-31413135)
chr6 (47-155)||(26901641-26901749)
chr6 (40-161)||(29395389-29395510)
chr6 (48-174)||(1195402-1195528)
chr6 (47-161)||(10105121-10105234)
chr6 (47-154)||(6358128-6358235)
chr6 (76-174)||(9697531-9697629)
chr6 (80-174)||(15616271-15616365)
chr6 (70-174)||(28918234-28918337)
chr6 (47-142)||(1368578-1368672)
[»] chr5 (33 HSPs)
chr5 (51-153)||(11409271-11409373)
chr5 (17-174)||(17542197-17542362)
chr5 (47-174)||(41762089-41762216)
chr5 (40-178)||(17493032-17493170)
chr5 (70-174)||(28489532-28489636)
chr5 (47-174)||(33146242-33146369)
chr5 (17-154)||(40089653-40089798)
chr5 (47-174)||(927371-927497)
chr5 (17-177)||(34105137-34105305)
chr5 (48-174)||(6772088-6772214)
chr5 (47-177)||(32249972-32250102)
chr5 (17-174)||(9894158-9894323)
chr5 (70-165)||(35379421-35379515)
chr5 (32-174)||(10314718-10314860)
chr5 (47-145)||(22303744-22303842)
chr5 (70-174)||(15270751-15270855)
chr5 (80-174)||(37241018-37241111)
chr5 (80-161)||(31316243-31316324)
chr5 (47-154)||(8264597-8264704)
chr5 (48-154)||(12479996-12480102)
chr5 (80-161)||(17444337-17444419)
chr5 (76-158)||(21541474-21541556)
chr5 (76-161)||(30519085-30519170)
chr5 (76-161)||(30559425-30559510)
chr5 (81-166)||(37241506-37241591)
chr5 (17-114)||(8674314-8674419)
chr5 (17-125)||(22768185-22768301)
chr5 (70-161)||(35111308-35111399)
chr5 (53-161)||(11601121-11601227)
chr5 (47-145)||(6955360-6955457)
chr5 (45-98)||(8255117-8255170)
chr5 (85-174)||(14834893-14834982)
chr5 (110-174)||(17492585-17492649)
[»] chr2 (40 HSPs)
chr2 (17-174)||(8736280-8736445)
chr2 (47-174)||(769105-769232)
chr2 (47-174)||(1583686-1583813)
chr2 (47-174)||(7309640-7309767)
chr2 (47-174)||(33189134-33189261)
chr2 (47-174)||(44255703-44255830)
chr2 (48-174)||(20935775-20935901)
chr2 (32-157)||(740790-740915)
chr2 (47-174)||(7611765-7611892)
chr2 (47-142)||(39630325-39630420)
chr2 (47-174)||(45094348-45094475)
chr2 (47-177)||(1730119-1730248)
chr2 (48-174)||(11141374-11141500)
chr2 (47-154)||(28021981-28022088)
chr2 (47-174)||(30698350-30698477)
chr2 (70-172)||(28740667-28740769)
chr2 (32-161)||(6749239-6749368)
chr2 (65-172)||(3092353-3092460)
chr2 (51-174)||(35047560-35047683)
chr2 (47-145)||(7167544-7167642)
chr2 (47-161)||(14306684-14306798)
chr2 (58-179)||(2274677-2274797)
chr2 (76-161)||(41585596-41585681)
chr2 (17-174)||(32840031-32840196)
chr2 (70-141)||(12263528-12263599)
chr2 (47-174)||(13017848-13017974)
chr2 (47-161)||(17905735-17905848)
chr2 (53-129)||(42941047-42941121)
chr2 (70-145)||(7227912-7227987)
chr2 (19-174)||(32839498-32839652)
chr2 (71-153)||(767263-767345)
chr2 (70-177)||(21504516-21504622)
chr2 (90-172)||(11981626-11981708)
chr2 (17-136)||(29278863-29278983)
chr2 (78-154)||(11036431-11036507)
chr2 (32-136)||(11606821-11606925)
chr2 (32-101)||(11594951-11595020)
chr2 (76-117)||(11595415-11595456)
chr2 (76-117)||(11607317-11607358)
chr2 (70-161)||(44205557-44205649)
[»] scaffold0400 (1 HSPs)
scaffold0400 (47-174)||(4375-4502)
[»] scaffold0365 (1 HSPs)
scaffold0365 (47-174)||(5019-5146)
[»] scaffold0014 (2 HSPs)
scaffold0014 (47-142)||(221073-221168)
scaffold0014 (47-142)||(223626-223721)
[»] scaffold0318 (1 HSPs)
scaffold0318 (47-174)||(2935-3062)
[»] scaffold0301 (1 HSPs)
scaffold0301 (47-174)||(7220-7347)
[»] scaffold0337 (2 HSPs)
scaffold0337 (76-180)||(15772-15876)
scaffold0337 (81-172)||(16285-16376)
[»] scaffold0129 (1 HSPs)
scaffold0129 (70-154)||(19685-19769)
[»] scaffold0047 (1 HSPs)
scaffold0047 (52-174)||(50189-50311)
[»] scaffold0169 (1 HSPs)
scaffold0169 (70-174)||(4144-4247)
[»] scaffold0065 (2 HSPs)
scaffold0065 (76-180)||(2814-2918)
scaffold0065 (81-172)||(9497-9588)
[»] scaffold0039 (1 HSPs)
scaffold0039 (47-174)||(109100-109226)
[»] scaffold0417 (1 HSPs)
scaffold0417 (47-140)||(11832-11926)


Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 13 - 328
Target Start/End: Complemental strand, 24063001 - 24062685
Alignment:
Q  13 aatatgaggaccaaaatgcaaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaa 112  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24063001 aatatgaggaccaaaatttaaaatttgtaagaaagaagaaatttaaaattcttagcgtttagatgtcatttgaaattctctaaatttaaattggactaaa 24062902  T
Q  113 tacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcatctaagctttctcttgattgttccca-tggtcgcctgg 211  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  24062901 tacttcacaaatttccatcattttgaaaattctcaaaattatcatccaatcaaaggaattcatctaagctttctcttgattgttcccattggtcgcatgg 24062802  T
Q  212 gtgattcatcccttgagatgacgagggaatcaaagaagttttcccaagtaattatgtacggggtgttcattattggcatgtttactgggaacacgttgaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  24062801 gtgattcatcccttgagatgacgagggaatcaaagaagttttcccaagtaattatgtacggggtgttcattattggcatgttcattgggaacacgttgaa 24062702  T
Q  312 gtctttggtaacatttg 328  Q
    |||||||||||||||||    
T  24062701 gtctttggtaacatttg 24062685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 2126053 - 2125926
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||  ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  2126053 gaagaaatttgaaattcttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 2125954  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  2125953 caaattattatccaaacaatggaattca 2125926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 35470318 - 35470191
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||  ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  35470318 gaagaaatttgaaattcttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 35470219  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  35470218 caaattattatccaaacaatggaattca 35470191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 42776120 - 42776247
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| ||  || |||||||||| |||| || |||||||| ||||| ||     
T  42776120 gaagaaatttaaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaatttctatcattttgaaaatgctt 42776219  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  42776220 caaattattatccaaacaatggaattca 42776247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 13088592 - 13088691
Alignment:
Q  37 ttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcatttt 136  Q
    ||||| ||| |||||||||||||||||||| | ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| | |||||||||    
T  13088592 ttgtaggaatgaagaaatttaaaattcctatcttttaggtgtcatttgaaattctctaaatttaatttgaacaaaatacttcataaattttcatcatttt 13088691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 29091348 - 29091206
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| ||| |||||| || | ||||| |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||    
T  29091348 aaaatttataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatc 29091249  T
Q  132 attttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||||| ||||||||  ||||||| |||||| |||  |||||||    
T  29091248 attttgaaaattcttcaaattattatccaaacaatagaattca 29091206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 52494096 - 52493988
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||||||||||||| ||| |  |||||||||| || | |||||| ||||||||||||||||||||||||||||| ||| | |    
T  52494096 tttaggtgtcatttgaaattctctaaatttaacttgaagaaaatacttcataatt-tccatccttttaaaaattctcaaaattatcatccaaacaacgaa 52493998  T
Q  170 attcatctaa 179  Q
    ||||| ||||    
T  52493997 attcacctaa 52493988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 27284539 - 27284635
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaatt 143  Q
    |||||||||| |||||| | || |||| || |||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||||||||||    
T  27284539 gaagaaatttgaaattcttggcttttaaatatcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttaaaaatt 27284635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 13318498 - 13318650
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||||||| |||||| |||  ||||| |||||||||||||||||||||||||| ||| ||    
T  13318498 tgaggaccaaaatgcaaaatttgaaaaattataacaatgaagaaatttcaaattcttagattttaggtgtcatttgaaattctctaaatttaacttgaac 13318597  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
     |||||||||| || | || |||||||| ||||||||  ||||||| ||||||    
T  13318598 aaaatacttcataagtttctatcattttgaaaattcttcaaattattatccaa 13318650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 42776804 - 42776701
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcat 175  Q
    |||||||||||||| ||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  |||||||||||||| ||| | ||||||     
T  42776804 tgtcatttgaaattatctaaatttaatttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattatcatccaaacaatgaaattcac 42776705  T
Q  176 ctaa 179  Q
    ||||    
T  42776704 ctaa 42776701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 24705562 - 24705440
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| |||||| |||||| ||| |||||| || | ||||| |||||||||||||||| ||||||||| ||| || ||||| |||| |||| || |||    
T  24705562 aaaatttataagaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatatttcataaatttctatc 24705463  T
Q  132 attttaaaaattctcaaaattat 154  Q
    ||||||||||||||  |||||||    
T  24705462 attttaaaaattcttcaaattat 24705440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 53760696 - 53760794
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||||||||||||  ||||||| |||||| |||  |||||||    
T  53760696 tgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttaaaaattcttcaaattattatccaaacaatagaattca 53760794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 46242974 - 46243099
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||  |||| |||||||||||||| ||||||||||||||||| ||| |  |||||||||  |||| ||||||||||| ||||||||     
T  46242974 gaagaattttgaaattattagcttttagatgtcattttaaattctctaaatttaacttgaataaaatacttcttaaatttccatcattttgaaaattctt 46243073  T
Q  147 aaaattatcatccaatcaaaggaatt 172  Q
     ||||||| |||||| ||| ||||||    
T  46243074 taaattattatccaaacaatggaatt 46243099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 56339306 - 56339202
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| ||| |||||||||||| ||||||||| |||||| |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| | |    
T  56339306 tttaggtgttatttgaaattctttaaatttaacttggacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgaa 56339207  T
Q  170 attca 174  Q
    |||||    
T  56339206 attca 56339202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 16516368 - 16516270
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| | ||||||||| ||||||||    
T  16516368 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaattct 16516270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 46242450 - 46242548
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  |||||||  ||||| ||| ||||||||    
T  46242450 tgtcatttgaaattctataaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattctccaaacaatggaattca 46242548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 10354553 - 10354424
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||||||| |||||| |||  ||||| ||||||||||||||||||| ||||   ||| || |||||||||| ||||  |||||    
T  10354553 aaaatttataacaatgaagaaatttgaaattcttaggttttaggtgtcatttgaaattctctatatttgtcttgaacaaaatacttcataaattcccatc 10354454  T
Q  132 attttaaaaattctcaaaattatcatccaa 161  Q
    ||||| ||||||||  ||||||| ||||||    
T  10354453 attttgaaaattcttcaaattattatccaa 10354424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 41139707 - 41139537
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| ||| ||||| ||| |||||| || | ||||| || ||||||||||||||||||||||  ||  ||    
T  41139707 tgaggaccaaaatgcaaaatttgaaaaactataacaaataagaagtttgaaattcttaacttttaggtgccatttgaaattctctaaatttagcttaaac 41139608  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcatctaa 179  Q
     |||||||||| |||| | ||||||||||||||||||  ||||||| |||||| |||  ||||||| ||||    
T  41139607 aaaatacttcataaattttcatcattttaaaaattctttaaattattatccaaacaatagaattcacctaa 41139537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 40338152 - 40338256
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||| ||||||||||| ||| |  |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| | |    
T  40338152 tttaggtgtcatttgaaattttctaaatttaacttgaataaaatacttcataaatttccatcattttgaaaattctgtaaattattatccaaacaatgaa 40338251  T
Q  170 attca 174  Q
    |||||    
T  40338252 attca 40338256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 17727261 - 17727134
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||  || |||||||||  |||| ||||| ||||| ||||||||     
T  17727261 gaagaattttgaaattcttaacttttagttgtcatttgaaattctctaaatttaactttaacaaaatacttcgtaaatttccataattttgaaaattctt 17727162  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| | ||||||    
T  17727161 caaattattatccaaacaatgaaattca 17727134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 18922449 - 18922516
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaata 114  Q
    |||| |||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||| |||||    
T  18922449 gaaggaatttaaaattcatagcttttagatatcatttgaaattctctaaatttaacttggacaaaata 18922516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 4490223 - 4490109
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||  ||| |||||||||||||||||||||| ||| || |||||| ||| |||| ||||||||||| ||||||||     
T  4490223 gaagaattttgaaattcttaacttttatgtgtaatttgaaattctctaaatttaacttgaacaaaatacatcataaatttccatcattttgaaaattctt 4490124  T
Q  147 aaaattatcatccaa 161  Q
     ||||||| ||||||    
T  4490123 taaattattatccaa 4490109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 54566385 - 54566277
Alignment:
Q  33 aaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatca 132  Q
    |||||| ||| || |||||| ||| |||||| || | || || |||||||||||||||| ||||||||| ||| || |||||||||| |||| || ||||    
T  54566385 aaatttataacaatgaagaattttgaaattcttaactttcaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttcgatca 54566286  T
Q  133 ttttaaaaa 141  Q
    |||||||||    
T  54566285 ttttaaaaa 54566277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 47108453 - 47108378
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    ||||| |||||||||||||||| ||||||||| ||| || |||||||||| |||| | |||| |||||||||||||    
T  47108453 tttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaattttcatcgttttaaaaattct 47108378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 40548128 - 40548222
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||||||||| ||| || ||||| |||  |||| ||||||||||| ||||| ||  ||||||| |||||| ||| ||||||||    
T  40548128 atttgaaattctctaaatttaacttgaacaaaatatttcctaaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattca 40548222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 42775780 - 42775674
Alignment:
Q  71 ttagatgtcatttgaaattctctaaatttaaattggac---taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaag 167  Q
    |||| |||||||||||||||||||||||||| ||| ||    |||||||||| |||| ||||| ||||| |||||| |  ||||||| |||||| ||| |    
T  42775780 ttaggtgtcatttgaaattctctaaatttaacttgaacaaaaaaatacttcataaatttccattattttgaaaattatttaaattattatccaaacaatg 42775681  T
Q  168 gaattca 174  Q
    |||||||    
T  42775680 gaattca 42775674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 30303894 - 30303819
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    ||||| ||| |||||||||||||||||||||| |||||  |||||||||| |||| | ||| ||||| ||||||||    
T  30303894 tttaggtgttatttgaaattctctaaatttaagttggataaaatacttcataaattttcattattttgaaaattct 30303819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 52294945 - 52295036
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    ||||| ||||||||||||||||||| |||||| ||| ||  ||||||||| ||||   ||||||||| ||||||||  ||||||| ||||||    
T  52294945 tttaggtgtcatttgaaattctctacatttaacttgaacacaatacttcataaattctcatcattttgaaaattcttcaaattattatccaa 52295036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 33915494 - 33915548
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaa 101  Q
    ||||||| || ||||| ||| | ||||||||||||||||||||||||||||||||    
T  33915494 gaagaaaattgaaatttctaccttttagatgtcatttgaaattctctaaatttaa 33915548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 29685957 - 29686047
Alignment:
Q  51 aaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaa 141  Q
    |||||| |||||| || | ||||| ||||||| ||||||||||||||| ||  || || |||||||| | |||| ||||||||||| ||||    
T  29685957 aaatttgaaattcttaacttttaggtgtcattagaaattctctaaattcaacatgaacaaaatactttataaatttccatcattttgaaaa 29686047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 17727091 - 17727026
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    |||| |||||||||||||| || ||| || ||||| |||| |||| | ||||||||||||||||||    
T  17727091 atttaaaattctctaaattcaatttgaacaaaatatttcataaattttcatcattttaaaaattct 17727026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 16300129 - 16300189
Alignment:
Q  81 tttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaa 141  Q
    |||||||||||||| |||||| ||| || |||||||||| |||| | |||||||| |||||    
T  16300129 tttgaaattctctatatttaacttgtacaaaatacttcataaattttcatcatttgaaaaa 16300189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 40495913 - 40495786
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||||||||| ||     
T  40495913 gaagaaatttaaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttaaaaatgctt 40495814  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  40495813 caaattattatccaaacaatggaattca 40495786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 23696140 - 23695991
Alignment:
Q  17 tgaggaccaaaatgcaaaatttgtaa--------gaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    ||||||||||||||||||||||||||        ||| |||||||||| |||||| |||| |||||||||||||||||||| ||||||||||| ||| ||    
T  23696140 tgaggaccaaaatgcaaaatttgtaaaacgataagaatgaagaaatttcaaattcttagcttttagatgtcatttgaaattttctaaatttaacttgaac 23696041  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatc 158  Q
     |||||||| | |||| | |||| |||||||||||||| |||||||||||    
T  23696040 aaaatactttataaattttcatcgttttaaaaattctccaaattatcatc 23695991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 14603125 - 14603250
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  14603125 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 14603224  T
Q  147 aaaattatcatccaatcaaaggaatt 172  Q
     ||||||| |||||| ||| ||||||    
T  14603225 caaattattatccaaacaatggaatt 14603250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 30524451 - 30524322
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||||||||||| ||| || |||||||||| |||| |||||||||||||||||  |     
T  30524451 gaagaaatttaaaattcttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttaaaaatattt 30524352  T
Q  147 aaaattatcatccaatcaaaggaattcatc 176  Q
     ||||||| |||||| ||| | ||||||||    
T  30524351 caaattattatccaaacaatgaaattcatc 30524322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 23548474 - 23548601
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||||||||||||| |||| ||||| |||||||||||||| ||||||||||| ||| || |||||||||| |||| || |||||||| ||||| ||     
T  23548474 gaagaaatttaaaattcttagcttttaggtgtcatttgaaattttctaaatttaacttgaacaaaatacttcataaatttctatcattttgaaaatgctt 23548573  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  23548574 caaattattatccaaacaatggaattca 23548601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 28539031 - 28539158
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||  || |||||||||| |||| ||||||||||| ||||| ||     
T  28539031 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaatttccatcattttgaaaatgctt 28539130  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  28539131 caaattattatccaaacaatggaattca 28539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 13814842 - 13814984
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| ||| |||||| || | |||||||||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||    
T  13814842 aaaatttataacaatgaagaattttgaaattcttaacttttagatgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatc 13814941  T
Q  132 attttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||||| ||||||||  ||||||| ||||||  || ||||||||    
T  13814942 attttgaaaattcttcaaattattatccaaataatggaattca 13814984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 44 - 174
Target Start/End: Original strand, 30080661 - 30080791
Alignment:
Q  44 aaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaatt 143  Q
    ||||||||||||| |||| | || | ||||| |||||||||||||| ||||||||||| ||  || |||||||||| |||| ||||||||||| ||||||    
T  30080661 aaagaagaaatttgaaatacttaacttttaggtgtcatttgaaattttctaaatttaacttaaacaaaatacttcataaatttccatcattttgaaaatt 30080760  T
Q  144 ctcaaaattatcatccaatcaaaggaattca 174  Q
    ||  |||||||||||||| ||| ||||||||    
T  30080761 cttcaaattatcatccaaacaatggaattca 30080791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 40667537 - 40667408
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  40667537 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 40667438  T
Q  147 aaaattatcatccaatcaaaggaattcatc 176  Q
     ||||||| |||||| ||| | ||||||||    
T  40667437 caaattattatccaaacaatgaaattcatc 40667408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 45967150 - 45967029
Alignment:
Q  40 taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaa 139  Q
    |||||| ||| |||||| |||||| |||  ||||| |||| ||||||||||| ||||||||| ||| || ||||| |||| |||| | ||||||||||||    
T  45967150 taagaatgaataaatttgaaattcttagtttttagttgtcgtttgaaattctttaaatttaacttgaacaaaatatttcataaattttcatcattttaaa 45967051  T
Q  140 aattctcaaaattatcatccaa 161  Q
    ||||||||||||||||||||||    
T  45967050 aattctcaaaattatcatccaa 45967029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 39342509 - 39342632
Alignment:
Q  51 aaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaa 150  Q
    |||||| |||||| |||| ||||| ||| |||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||  |||    
T  39342509 aaatttgaaattcttagcttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaa 39342608  T
Q  151 ttatcatccaatcaaaggaattca 174  Q
    |||| |||||| ||| ||||||||    
T  39342609 ttattatccaaacaatggaattca 39342632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 3905523 - 3905649
Alignment:
Q  48 aagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctca 147  Q
    ||||||||| ||||||||||| ||| | |||||||||||||||||||||||||| ||| || ||||| |||| |||| | ||||||||| ||||||||      
T  3905523 aagaaatttgaaattcctagctttttgctgtcatttgaaattctctaaatttaacttgaacaaaataattcataaattttcatcattttgaaaattcttc 3905622  T
Q  148 aaattatcatccaatcaaaggaattca 174  Q
    ||||||| |||||| |||  |||||||    
T  3905623 aaattattatccaaacaatagaattca 3905649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 40495441 - 40495299
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| ||| |||||| || | ||||| |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||    
T  40495441 aaaatttataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatc 40495342  T
Q  132 attttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||||| ||||||||  ||||||| |||||| |||  |||||||    
T  40495341 attttgaaaattcttcaaattattatccaaacaatagaattca 40495299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 35456000 - 35455875
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||| ||||||||||||||||| ||  || |||||||||| |||| ||||||||||| ||||| ||     
T  35456000 gaagaaatttgaaattcttagcttttaggtgtcatttaaaattctctaaatttaacttcaacaaaatacttcataaatttccatcattttgaaaatgctt 35455901  T
Q  147 aaaattatcatccaatcaaaggaatt 172  Q
     ||||||| |||||| ||| ||||||    
T  35455900 caaattattatccaaacaatggaatt 35455875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 22391413 - 22391577
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| ||    
T  22391413 tgaggaccaaaatgcaaaatttgataaaatataacaacgaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaac 22391512  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| | ||||||    
T  22391513 aaaatacttcagaaatttccatcatttt-aaaattctttaaattattatccaaacaatgaaattca 22391577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 25189112 - 25189216
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||||||||| |||||||||||||||||||| ||| || |||||||||  |||| ||||||||||| ||||||||  |||||||||||||| ||| | |    
T  25189112 tttagatgtcacttgaaattctctaaatttaacttgaacaaaatacttcgtaaatttccatcattttgaaaattcttcaaattatcatccaaacaatgaa 25189211  T
Q  170 attca 174  Q
    |||||    
T  25189212 attca 25189216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 33311000 - 33310868
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||  |||  ||||| |||||||| ||||||||||||||||| ||| || |||||||||| |||| ||||||||||| |||| |||     
T  33311000 gaagaaatttgaaatttataggttttaggtgtcattttaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaactcta 33310901  T
Q  147 aaaattatcatccaatcaaaggaattcatctaa 179  Q
     ||||||  |||||| |||||||||| ||||||    
T  33310900 caaattactatccaaacaaaggaattaatctaa 33310868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 26416149 - 26416035
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||| ||||||||||||||| | ||| || |||||||||  |||| ||||||||||| ||||||||     
T  26416149 gaagaaatttgaaattcttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcctaaatttccatcattttgaaaattctt 26416050  T
Q  147 aaaattatcatccaa 161  Q
     ||||||| ||||||    
T  26416049 caaattattatccaa 26416035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 30629253 - 30629126
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||  ||||| |||||||||||||| ||||||||||| ||| |  |||||||||| |||| ||||||||||| ||||| ||     
T  30629253 gaagaaatttgaaattcttagtttttaggtgtcatttgaaattttctaaatttaacttgaaaaaaatacttcataaatttccatcattttgaaaatcctt 30629154  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| | ||||||    
T  30629153 caaattattatccaaacaatgaaattca 30629126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 9784823 - 9784921
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||  ||||||| |||||| ||| ||| ||||    
T  9784823 tgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggatttca 9784921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 23455144 - 23455237
Alignment:
Q  81 tttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||  ||||||| |||||| ||| ||||||||    
T  23455144 tttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattca 23455237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 19865440 - 19865524
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattat 154  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||| ||||  |||||||||| ||||||||  |||||||    
T  19865440 tttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattaccatcattttgaaaattctttaaattat 19865524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 30587777 - 30587893
Alignment:
Q  58 aaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcat 157  Q
    |||||| |||| ||||| |||||||| ||||||||||||||| | ||| || |||||||||| |||| ||||||||||| ||||| ||  ||| ||| ||    
T  30587777 aaattcttagcttttaggtgtcatttaaaattctctaaatttgacttgaacaaaatacttcataaatttccatcattttgaaaatacttcaaactattat 30587876  T
Q  158 ccaatcaaaggaattca 174  Q
    |||| ||| ||||||||    
T  30587877 ccaaacaatggaattca 30587893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 34114479 - 34114539
Alignment:
Q  40 taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaattta 100  Q
    |||||| |||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  34114479 taagaatgaagaaatttgaaattcctaacttttagatgtcatttgaaattctctaaattta 34114539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 36328665 - 36328773
Alignment:
Q  54 tttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaatt-ggactaaatacttcacaaatctccatcattttaaaaattctcaaaatt 152  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||||||| || | || |||||||||| ||||  |||||||||| ||||||||  |||||    
T  36328665 tttaaaattcttagcttttaggtgtcatttgaaattctctgaatttaacttagaacaaaatacttcataaattaccatcattttgaaaattcttcaaatt 36328764  T
Q  153 atcatccaa 161  Q
    || ||||||    
T  36328765 attatccaa 36328773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 14790286 - 14790195
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    ||||| ||||||||||||||||||||||| || ||| || |||||||| | |||| | ||||||||||||||||||  ||||||| ||||||    
T  14790286 tttaggtgtcatttgaaattctctaaattcaacttgaacaaaatactttataaattttcatcattttaaaaattctttaaattattatccaa 14790195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 42816712 - 42816618
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||||||||| ||| || |||||||||| |||| | ||||||||| ||||| ||  ||||||| |||||| ||| ||||||||    
T  42816712 atttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaatgcttcaaattattatccaaacaatggaattca 42816618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 15991092 - 15990973
Alignment:
Q  40 taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaa 139  Q
    |||||| ||||||||| ||||||| || | ||||  | | |||||||||| |||| |||||| ||  || |||||||||| |||| ||||||||||| ||    
T  15991092 taagaatgaagaaattgaaaattcttaacttttatgtatgatttgaaattttctacatttaactt--acaaaatacttcataaatttccatcattttgaa 15990995  T
Q  140 aattctcaaaattatcatccaa 161  Q
    ||| ||| ||||||||||||||    
T  15990994 aatactctaaattatcatccaa 15990973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 43791253 - 43791159
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||||||||| ||| || ||||||||   |||| ||||||||||| ||||||||  ||||||| |||||| ||| ||| ||||    
T  43791253 atttgaaattctctaaatttaacttgaaccaaatacttattaaatttccatcattttgaaaattcttcaaattattatccaaacaatggagttca 43791159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 32650735 - 32650655
Alignment:
Q  81 tttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    ||||||||| ||||||||||| ||| |  |||||||||| |||| ||||||||||| ||||||||  ||||||| ||||||    
T  32650735 tttgaaattatctaaatttaacttgaaaaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaa 32650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 45984493 - 45984409
Alignment:
Q  90 ctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| |||  |||||||    
T  45984493 ctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaattgaattca 45984409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 45988853 - 45988769
Alignment:
Q  90 ctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| |||  |||||||    
T  45988853 ctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaattgaattca 45988769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 18938898 - 18938969
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaa 141  Q
    ||||| |||||||||| ||||||||||||||| ||| || |||||||||| |||| || |||||||| ||||    
T  18938898 tttaggtgtcatttgagattctctaaatttaatttgaacaaaatacttcataaatttctatcattttgaaaa 18938969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 18926727 - 18926813
Alignment:
Q  90 ctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcatc 176  Q
    |||||||||||| ||| || |||||||||| |||| ||||||||||| ||| || |  |||||||||||||| ||| | ||||||||    
T  18926727 ctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaattttttcaaattatcatccaaacaatgaaattcatc 18926813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 37460771 - 37460824
Alignment:
Q  48 aagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaa 101  Q
    |||||||||||||||| |||  ||||||||| |||||||||| |||||||||||    
T  37460771 aagaaatttaaaattcgtagtttttagatgtgatttgaaattttctaaatttaa 37460824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 6e-31; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 8225002 - 8224837
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| |||||||||| || | ||||| |||||||||||||||||||||||||| ||| ||    
T  8225002 tgaggaccaaaatgcaaaatttgaaaaattataacaatgaagaattttaaaattcttaccttttaggtgtcatttgaaattctctaaatttaacttgaac 8224903  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     |||||||||| |||| ||||||||||| ||||||||  |||||||||||||| ||| ||||||||    
T  8224902 aaaatacttcataaatttccatcattttgaaaattctttaaattatcatccaaacaatggaattca 8224837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 41822390 - 41822550
Alignment:
Q  17 tgaggaccaaaatgcaaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatact 116  Q
    ||||||||||||||||||| || ||  || |||||| |||||||||| ||   ||||| |||||||||||||||||||| ||||| ||| || |||||||    
T  41822390 tgaggaccaaaatgcaaaaattatatcaatgaagaattttaaaattcttaagttttaggtgtcatttgaaattctctaattttaacttgaacaaaatact 41822489  T
Q  117 tcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcatct 177  Q
    ||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| |||||||||||    
T  41822490 tcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcatct 41822550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 28632426 - 28632590
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg-------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggact 109  Q
    |||||||||||||||||||||||       ||| || |||||||||| |||||| || | |||||||||||||||||||||||||||||||| ||| ||     
T  28632426 tgaggaccaaaatgcaaaatttgaaaattataacaatgaagaaatttgaaattcttaacttttagatgtcatttgaaattctctaaatttaacttgaaca 28632525  T
Q  110 aaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||| |||| | ||||||||| ||||||||  ||||||| |||||| ||| ||||||||    
T  28632526 aaatacttcataaattttcatcattttgaaaattctttaaattattatccaaacaatggaattca 28632590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 15467840 - 15467967
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  15467840 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 15467939  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  15467940 caaattattatccaaacaatggaattca 15467967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 52135502 - 52135616
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||||||||||||| || | |||||| |||||||||||||||| || ||||| ||| || |||||||||| |||| ||||||||||||||||||||     
T  52135502 gaagaaatttaaaattcttaacttttagacgtcatttgaaattctcaaactttaacttgaacaaaatacttcataaatttccatcattttaaaaattctt 52135601  T
Q  147 aaaattatcatccaa 161  Q
     ||||||||||||||    
T  52135602 caaattatcatccaa 52135616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 946570 - 946441
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  946570 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 946471  T
Q  147 aaaattatcatccaatcaaaggaattcatc 176  Q
     ||||||| |||||| |||  |||||||||    
T  946470 caaattattatccaaacaatagaattcatc 946441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 31166506 - 31166376
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||| || |||||| |||| |||||||||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  31166506 gaagaaaattgaaattcttagcttttagatgtcatttgaaattctataaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctt 31166407  T
Q  147 aaaattatcatccaatcaaaggaattcatct 177  Q
     ||||||| || ||| |||  ||||||||||    
T  31166406 caaattattattcaaacaatagaattcatct 31166376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 37447198 - 37447363
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||| | |||||||||||||||||||||||||| ||| ||    
T  37447198 tgaggaccaaaatgcaaaatttgaaaaattataacaatgaagaattttgaaattcttaactttttggtgtcatttgaaattctctaaatttaacttgaac 37447297  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| ||||||||    
T  37447298 caaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattca 37447363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 44571435 - 44571270
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||||| ||||||||||||||||||||||| || ||| ||    
T  44571435 tgaggaccaaaatgcaaaatttgaaaaaatataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaattcaacttgaac 44571336  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     |||||||| | |||| ||||||||||||||||||||  ||||||| |||||| ||| ||||||||    
T  44571335 aaaatactttataaatttccatcattttaaaaattctttaaattattatccaaacaatggaattca 44571270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 39887323 - 39887196
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  39887323 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctt 39887224  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  39887223 caaattattatccaaacaatggaattca 39887196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 41822597 - 41822704
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||||||| ||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| |||    
T  41822597 tttaggtgtcatttgaaattctctaattttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgga 41822696  T
Q  170 attcatct 177  Q
    ||||||||    
T  41822697 attcatct 41822704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 21267688 - 21267801
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| || | ||||| |||||||||||||||||||||||||||||| || |||| ||||| |||| ||||||||||| ||||||||     
T  21267688 gaagaaatttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaaattgaacaaaattcttcataaat-tccatcattttgaaaattctt 21267786  T
Q  147 aaaattatcatccaa 161  Q
     ||||||| ||||||    
T  21267787 caaattattatccaa 21267801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 37036811 - 37036951
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| || |||    
T  37036811 aaaatttctaacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttctatc 37036910  T
Q  132 attttaaaaattctcaaaattatcatccaatcaaaggaatt 172  Q
    ||||| ||||||||  ||||||| |||| | ||| ||||||    
T  37036911 attttgaaaattcttcaaattattatccgaacaatggaatt 37036951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 49659389 - 49659285
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||||||| |||||||||||||||||||||| ||| || |||||||||| ||||  |||||||||| ||||||||  ||||||| |||||| ||| |||    
T  49659389 tttagatgttatttgaaattctctaaatttaacttgaacaaaatacttcataaattaccatcattttgaaaattcttcaaattattatccaaacaatgga 49659290  T
Q  170 attca 174  Q
    |||||    
T  49659289 attca 49659285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 10166701 - 10166563
Alignment:
Q  40 taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaa 139  Q
    |||||| ||||||||||||||||| || | ||||| |||||||||||||||| ||||||||| ||| |  |||||||||| |||| | |||| |||| ||    
T  10166701 taagaatgaagaaatttaaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttgaataaaatacttcataaat-ttcatcgttttgaa 10166603  T
Q  140 aattctcaaaattatcatccaatcaaaggaattcatctaa 179  Q
    ||||||| |||||||||| ||| ||| | |||||| ||||    
T  10166602 aattctccaaattatcattcaaacaatgaaattcacctaa 10166563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 37448301 - 37448405
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaa-atacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagg 168  Q
    |||||||||||||||||||||| ||||||||| ||| || || |||||||| |||| ||||||||||| ||||||||| ||||||| |||||| ||| ||    
T  37448301 tttagatgtcatttgaaattctttaaatttaacttgaacaaatatacttcataaatttccatcattttgaaaattctccaaattat-atccaaacaatgg 37448399  T
Q  169 aattca 174  Q
    ||||||    
T  37448400 aattca 37448405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 48953754 - 48953637
Alignment:
Q  57 aaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatca 156  Q
    ||||||| |||| ||||| |||||||| ||||||||||||||| | ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||| |    
T  48953754 aaaattcttagcttttaggtgtcatttcaaattctctaaatttgacttgaacaaaatacttcataaatatccatcattttgaaaattcttcaaattatta 48953655  T
Q  157 tccaatcaaaggaattca 174  Q
    ||||| |||  |||||||    
T  48953654 tccaaacaatagaattca 48953637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 49216238 - 49216327
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatcc 159  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||| ||||    
T  49216238 tttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctttaaattattatcc 49216327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 35491353 - 35491225
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||  |||||||||||||||||||||||||| |||  | |||||||||| |||| ||||||||||| ||||||||     
T  35491353 gaagaattttgaaattcttaacttttaagtgtcatttgaaattctctaaatttaacttgagcaaaatacttcataaatttccatcattttgaaaattctt 35491254  T
Q  147 aaaattatcatccaatcaaaggaattcat 175  Q
     ||||||| |||||| ||| | |||||||    
T  35491253 caaattattatccaaacaatgaaattcat 35491225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 1902246 - 1902143
Alignment:
Q  58 aaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcat 157  Q
    ||||||||| | ||||| ||||||||||||||||| |||||| | || ||  |||||| |||  ||| ||||||||||||||||||||| ||||||||||    
T  1902246 aaattcctaacttttaggtgtcatttgaaattctcaaaattttacttcgagaaaatacctcatgaatttccatcattttaaaaattctctaaattatcat 1902147  T
Q  158 ccaa 161  Q
    ||||    
T  1902146 ccaa 1902143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 34003657 - 34003530
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| || | ||||| ||| |||| ||||||||||||||||| ||| || ||||| |||| |||| ||||||||||| | |||||      
T  34003657 gaagaaatttgaaattcttaacttttaggtgttattttaaattctctaaatttaacttgaacaaaatatttcataaatttccatcattttgataattcat 34003558  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     |||||||||||||| ||| ||||||||    
T  34003557 caaattatcatccaaacaatggaattca 34003530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 37447779 - 37447906
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| ||||||||||| ||||||| |||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  37447779 gaagaattttgaaattcttaacttttaggtgtcatttgaatttctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctt 37447878  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||| ||| |||||| ||| ||||||||    
T  37447879 caaactattatccaaacaatggaattca 37447906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 41823037 - 41823167
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| ||| ||||||||||||||| |||||| ||| || |||||||||| |||| ||||| ||||| ||||||||     
T  41823037 gaagaattttgaaattcttaacttttaggtgttatttgaaattctctacatttaacttgaacaaaatacttcataaatttccattattttgaaaattctt 41823136  T
Q  147 aaaattatcatccaatcaaaggaattcatct 177  Q
     ||| ||| |||||| ||| |||||||||||    
T  41823137 caaactattatccaaacaatggaattcatct 41823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 13181755 - 13181670
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| || |||||  ||||||| ||||||    
T  13181755 tgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaatattcttcaaattattatccaa 13181670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 44570851 - 44570747
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| ||||||||||||||||||| |||||| ||| || |||||||||| |||| ||||||||||  ||||||||  ||| ||| |||||| ||| |||    
T  44570851 tttaggtgtcatttgaaattctctatatttaacttgaacaaaatacttcataaatttccatcatttcgaaaattcttcaaactattatccaaacaatgga 44570752  T
Q  170 attca 174  Q
    |||||    
T  44570751 attca 44570747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 47820385 - 47820282
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| ||||||||||||||| |||||||||| ||| || |||||||||| |||| ||||||||||||||||| ||  ||||||| |||||| ||| | |    
T  47820385 tttaggtgtcatttgaaattc-ctaaatttaacttgaacaaaatacttcataaatttccatcattttaaaaatgcttcaaattattatccaaacaatgaa 47820287  T
Q  170 attca 174  Q
    |||||    
T  47820286 attca 47820282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 51848053 - 51847915
Alignment:
Q  40 taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaa 139  Q
    |||||| |||||||||| |||||| |||| ||||| |||||||||||||||  |||| |||| ||  || |||||||| | |||| ||||||||| | ||    
T  51848053 taagaatgaagaaatttgaaattcatagcttttaggtgtcatttgaaattccataaa-ttaacttaaacaaaatacttgataaatttccatcattcttaa 51847955  T
Q  140 aattctcaaaattatcatccaatcaaaggaattcatctaa 179  Q
     |||||| |||||||||||||| | | |||||||| ||||    
T  51847954 tattctccaaattatcatccaaacgatggaattcacctaa 51847915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 174
Target Start/End: Complemental strand, 42230883 - 42230789
Alignment:
Q  81 tttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattc-tcaaaattatcatccaatcaaaggaattca 174  Q
    ||||||||||||||||||||| ||  || | |||||||| |||| ||||||||||||||||||| |||||||||| |||||| ||| | ||||||    
T  42230883 tttgaaattctctaaatttaacttaaacaagatacttcataaatttccatcattttaaaaattcttcaaaattattatccaaacaatgaaattca 42230789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 50471946 - 50471832
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||  |||||||||||||| ||||||||||| ||  || |||||||||| |||| ||||||||||| ||||||||     
T  50471946 gaagaattttgaaattcttaacatttatgtgtcatttgaaattttctaaatttaatttcaacaaaatacttcaaaaatttccatcattttgaaaattctt 50471847  T
Q  147 aaaattatcatccaa 161  Q
     ||||||| ||||||    
T  50471846 taaattattatccaa 50471832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 32201965 - 32201838
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattc-t 145  Q
    |||||||||| |||||| |||| ||||| ||||||||||||||||||| |||||| | | || |||||||||| ||||  | |||||||| ||||||| |    
T  32201965 gaagaaatttgaaattcatagcttttaggtgtcatttgaaattctctatatttaactagaacaaaatacttca-aaattccaatcattttgaaaattctt 32201867  T
Q  146 caaaattatcatccaatcaaaggaattca 174  Q
    |||| | || |||||| ||| ||||||||    
T  32201866 caaattaattatccaaacaatggaattca 32201838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 947080 - 946982
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||| ||||||||| ||| || ||||| |||| |||| || |||||||| ||||| ||  ||||||| |||||| ||| ||||||||    
T  947080 tgtcatttgaaattctttaaatttaacttgaacaaaatatttcataaatttctatcattttgaaaatgcttcaaattattatccaaacaatggaattca 946982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 32128196 - 32128119
Alignment:
Q  77 gtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattat 154  Q
    ||||||||||||||||||||||||| ||| || |||||| ||| ||||  |||||||||| ||||||||  |||||||    
T  32128196 gtcatttgaaattctctaaatttaacttgaacaaaatacctcataaattcccatcattttgaaaattcttcaaattat 32128119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 171
Target Start/End: Original strand, 6470592 - 6470687
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaat 171  Q
    |||||||||||||||||||||||||| ||| || || |  |||| |||| ||||||||||| ||||||||  ||||||| || ||| ||| |||||    
T  6470592 tgtcatttgaaattctctaaatttaacttgaacaaattttttcataaatttccatcattttgaaaattcttcaaattattattcaaacaatggaat 6470687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 23956239 - 23956366
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| || | ||||  |||||||||||||||||||||||||| ||| |  |||||||| | |||| |||||||| || | |||| |     
T  23956239 gaagaaatttgaaattcttaacttttatgtgtcatttgaaattctctaaatttaacttgaataaaatactttataaatttccatcatattgataattttt 23956338  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| | ||||||    
T  23956339 caaattataatccaaacaatgaaattca 23956366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 52280853 - 52280941
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatc 158  Q
    ||||| |||||||||||||||| ||||||| |  ||||  || ||||||  |||| ||  |||||||||||||||| ||||||||||||    
T  52280853 tttaggtgtcatttgaaattctttaaatttgatatggataaattacttcgtaaatttcagtcattttaaaaattcttaaaattatcatc 52280941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 31195641 - 31195525
Alignment:
Q  58 aaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcat 157  Q
    |||||| |||| || || |||||||| ||||||| ||||||| | ||  || |||||||||  |||| |  |||||||||||||||||  ||||||| ||    
T  31195641 aaattcttagctttcaggtgtcatttcaaattctttaaatttgactttaacaaaatacttcgtaaatttttatcattttaaaaattcttcaaattattat 31195542  T
Q  158 ccaatcaaaggaattca 174  Q
     ||| ||| ||||||||    
T  31195541 acaaacaatggaattca 31195525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 47337077 - 47336945
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||||||| || || | |||||| ||||||||||||||||||||||||| ||| || |||||||||| |||| || |||||||| ||||||||     
T  47337077 gaagaaatttaaaaatcttaacttttagaagtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttctatcatttttaaaattcta 47336978  T
Q  147 aaaattatcatccaatcaaaggaattcatctaa 179  Q
     |||||||||||||| ||| |||||||| ||||    
T  47336977 taaattatcatccaaacaatggaattcacctaa 47336945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 48947801 - 48947674
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  48947801 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 48947702  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  48947701 caaattattatccaaacaatggaattca 48947674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 7976782 - 7976617
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| ||    
T  7976782 tgaggaccaaaatgcaaaatttgaaaaaatataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaac 7976683  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     |||||||||| |||| ||||||||||||||||||||  ||||||| |||||| |||  |||||||    
T  7976682 aaaatacttcataaatttccatcattttaaaaattctttaaattattatccaaacaatagaattca 7976617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 43863827 - 43863954
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||  ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  43863827 gaagaaatttgaaattcttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 43863926  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  43863927 caaattattatccaaacaatggaattca 43863954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 53129719 - 53129846
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| | ||||||||| ||||| ||     
T  53129719 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaatactt 53129818  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  53129819 caaattattatccaaacaatggaattca 53129846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 53470305 - 53470432
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  53470305 gaagaaatttaaaattcttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 53470404  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| | ||||||    
T  53470405 caaattattatccaaacaatgaaattca 53470432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 21731097 - 21730967
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||||||||||||| ||   |||||||||||||||||||||||||||||||| ||| || ||||| |||| |||| |||||||||||||||||| |     
T  21731097 gaagaaatttaaaattcttaagttttagatgtcatttgaaattctctaaatttaacttgaacaaaatagttcataaatttccatcattttaaaaattgtt 21730998  T
Q  147 aaaattatcatccaatcaaaggaattcatct 177  Q
     ||||||| || ||| ||| | |||||||||    
T  21730997 taaattattattcaaacaatgaaattcatct 21730967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 671499 - 671622
Alignment:
Q  51 aaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaa 150  Q
    |||||| |||||| |||  |||||||||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||  |||    
T  671499 aaatttgaaattcttagtttttagatgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaa 671598  T
Q  151 ttatcatccaatcaaaggaattca 174  Q
    |||| | |||| ||| ||||||||    
T  671599 ttattacccaaacaatggaattca 671622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 159
Target Start/End: Complemental strand, 26547226 - 26547099
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||    
T  26547226 aaaatttataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatc 26547127  T
Q  132 attttaaaaattctcaaaattatcatcc 159  Q
    ||||| ||||||||  ||||||| ||||    
T  26547126 attttgaaaattcttcaaattattatcc 26547099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 34088767 - 34088640
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||  ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  34088767 gaagaaatttgaaattcttagtttttaggtgtcatttgaaattctctaaatttaatttgaacaaaatacttcataaatttccatcattttgaaaatgctt 34088668  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||| | ||| ||||||||    
T  34088667 caaattattatcctaacaatggaattca 34088640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 36397865 - 36397992
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||  ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  36397865 gaagaaatttgaaattcttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 36397964  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||| | ||| ||||||||    
T  36397965 caaattattatccgaacaatggaattca 36397992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 46636042 - 46635935
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||  || |||| ||||| |||| | ||||||||| |||||||||    
T  46636042 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatgcttcataaattttcatcattttgaaaattctc 46635943  T
Q  147 aaaattat 154  Q
     |||||||    
T  46635942 caaattat 46635935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 52527209 - 52527107
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||| ||||| ||||||||  ||||||||| |||| ||| |||    
T  52527209 tttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccattattttgaaaattcttcaaattatcaaccaaacaatgga 52527110  T
Q  170 att 172  Q
    |||    
T  52527109 att 52527107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 1146832 - 1146935
Alignment:
Q  58 aaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattc-tcaaaattatca 156  Q
    |||||| |||| |||||||||||||||||||||||||||||||| || ||| |||||||||| |||| || |||||||| ||||||| ||||| | ||||    
T  1146832 aaattcatagcttttagatgtcatttgaaattctctaaatttaacttcgac-aaatacttcataaatatctatcattttgaaaattcttcaaattaatca 1146930  T
Q  157 tccaa 161  Q
    |||||    
T  1146931 tccaa 1146935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 2104907 - 2104803
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| |||  ||    
T  2104907 tttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaataga 2104808  T
Q  170 attca 174  Q
    |||||    
T  2104807 attca 2104803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 46706817 - 46706721
Alignment:
Q  78 tcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||||||||||| ||| |  |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| ||||||||    
T  46706817 tcatttgaaattctctaaatttaacttgaaaaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattca 46706721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 47767628 - 47767501
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| ||||||||||||||||||| |||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  47767628 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctacatttaatttgaacaaaatacttcataaatttccatcattttgaaaattctt 47767529  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||| ||| |||||| ||| | ||||||    
T  47767528 caaactattatccaaacaatgtaattca 47767501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 21307413 - 21307535
Alignment:
Q  52 aatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaat 151  Q
    ||||| |||||| || | ||||| |||||||||||||||||||||||||| ||| |  |||||||||| |||| || |||||||| |||||| |  ||||    
T  21307413 aatttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcataaatttctatcattttgaaaattttacaaat 21307512  T
Q  152 tatcatccaatcaaaggaattca 174  Q
    ||| |||||| ||| ||||||||    
T  21307513 tattatccaaacaatggaattca 21307535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 35279831 - 35279925
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| | ||||||    
T  35279831 atttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgtaattca 35279925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 44288340 - 44288449
Alignment:
Q  52 aatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaat 151  Q
    ||||| |||||| |||| ||| | |||||||||||||| ||||||||||| ||| || |||||||||| |||| | ||  |||||||| |||||| ||||    
T  44288340 aatttgaaattcttagctttttggtgtcatttgaaattatctaaatttaacttgaacaaaatacttcataaattttcaatattttaaagattctccaaat 44288439  T
Q  152 tatcatccaa 161  Q
    ||||||||||    
T  44288440 tatcatccaa 44288449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 31021876 - 31021768
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcatttt-aaaaattct 145  Q
    |||||| ||| |||||| || | ||||| |||||||||||||| | ||||||||| |||||| |||||||||| |||| ||||||||||| |||||||||    
T  31021876 gaagaattttgaaattcttaacttttaggtgtcatttgaaattttttaaatttaacttggacaaaatacttcataaatttccatcattttgaaaaattct 31021777  T
Q  146 caaaattat 154  Q
      |||||||    
T  31021776 tcaaattat 31021768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 36636078 - 36635982
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaatt 143  Q
    |||||||||| |||||| || | ||||| ||||||||  |||||||||||||||| ||| || |||| ||||| |||| ||||||||||||||||||    
T  36636078 gaagaaatttgaaattcttaacttttaggtgtcatttataattctctaaatttaacttgaacaaaatccttcataaatttccatcattttaaaaatt 36635982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 7302542 - 7302415
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||| |||||||||  |||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  7302542 gaagaattttgaaattcttaacttttaggtgtcattttaaattctctgcatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctt 7302443  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||| ||| |||||| ||| ||||||||    
T  7302442 caaactattatccaaacaatggaattca 7302415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 26323519 - 26323420
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcatctaa 179  Q
    |||||||||||||||||||| | ||| || |||||||||| |||| ||||||||||| ||||| ||  ||||||| |||||| ||| |||||||| ||||    
T  26323519 atttgaaattctctaaatttgacttgaacaaaatacttcataaatttccatcattttgaaaatcctataaattattatccaaacaacggaattcacctaa 26323420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 37054567 - 37054492
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    ||||| ||||||||||||||||||| |||||| ||| || |||||||||| |||| ||||||||||| ||||||||    
T  37054567 tttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 37054492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 42005829 - 42005927
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    |||||| ||| |||||| || | ||||| ||||||||||||||||||| |||||| ||| || |||||||||| |||| | ||||||||| ||||||||    
T  42005829 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaattttcatcattttgaaaattct 42005927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 55460507 - 55460409
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||| |||| |||| ||| || |||||||||  |||| ||||||||||| |||||||||  ||||||||||||| | | ||||||||    
T  55460507 tgtcatttgaaattctttaaaattaacttgaacaaaatacttcgtaaatttccatcattttgaaaattctcctaattatcatccaaacgatggaattca 55460409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 34396386 - 34396475
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcatttt 136  Q
    |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || |||||||||| ||||  ||||||||||    
T  34396386 gaagaatttttaaattcttaccttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattcccatcatttt 34396475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 6836958 - 6837042
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattat 154  Q
    ||||| |||||||||||||||||||||||||| ||| || |||| ||||| |||| || |||||||| ||||||||  |||||||    
T  6836958 tttaggtgtcatttgaaattctctaaatttaacttgaacaaaatgcttcataaatttctatcattttgaaaattcttcaaattat 6837042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 38506775 - 38506879
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||| ||| ||||| ||| || |||||||| | |||| ||||||||||| ||||||||  ||||||| || ||| ||| |||    
T  38506775 tttaggtgtcatttgaaattctttaattttaacttgaacaaaatactttataaatttccatcattttgaaaattcttcaaattattattcaaacaatgga 38506874  T
Q  170 attca 174  Q
    |||||    
T  38506875 attca 38506879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 30766749 - 30766622
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| ||||||||||||||| ||| |||||| ||| || |||||||||| |||| || ||| |||| ||||||||     
T  30766749 gaagaattttgaaattcttaacttttaggtgtcatttgaaattcactacatttaacttgaacaaaatacttcataaatttctatctttttgaaaattctt 30766650  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||| ||| |||||| ||| ||||||||    
T  30766649 caaactattatccaaacaatggaattca 30766622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 32666081 - 32665966
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattc-t 145  Q
    |||||||||| ||||| ||| | ||||| || ||||| |||||||| |||||||| || ||| |||||||||| |||| | || |||||||||||||| |    
T  32666081 gaagaaatttgaaatttctaacttttaggtgacatttcaaattctcaaaatttaactttgacaaaatacttcataaattttcagcattttaaaaattctt 32665982  T
Q  146 caaaattatcatccaa 161  Q
    |||| | |||||||||    
T  32665981 caaattaatcatccaa 32665966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 158
Target Start/End: Complemental strand, 20634375 - 20634293
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatc 158  Q
    |||||||||||||||||||||||||| ||| || ||||| |||| | || || |||||||||||| |||| ||| ||||||||    
T  20634375 tgtcatttgaaattctctaaatttaacttgtacaaaataattcatagatttcaatcattttaaaatttcttaaagttatcatc 20634293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 47284113 - 47284207
Alignment:
Q  81 tttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcat 175  Q
    ||||||||||| ||||||||| ||| |  |||||||||| |||| ||||||||||| ||||||||  ||||||| || ||| ||| |||||||||    
T  47284113 tttgaaattctttaaatttaacttgaataaaatacttcataaatttccatcattttgaaaattcttcaaattattattcaaacaatggaattcat 47284207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 15760358 - 15760451
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaa 140  Q
    |||||||||| |||||| || | |||||||||||||||||| ||| |||||||||  || || |||||||| | |||| ||||||||| |||||    
T  15760358 gaagaaatttgaaattcttaacttttagatgtcatttgaaaatctttaaatttaacctgaacaaaatacttaataaatttccatcattataaaa 15760451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 28182122 - 28182215
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaa 141  Q
    |||||| ||| |||||| || | ||||| ||||  |||||||||||||||||||| ||| || || ||||||| |||| ||||||||||||||||    
T  28182122 gaagaattttgaaattcttaacttttaggtgtctattgaaattctctaaatttaacttgaac-aagtacttcataaatttccatcattttaaaaa 28182215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 31189258 - 31189387
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||||||| || ||| |||  || || ||| |||||||||||| ||||||||| ||  || |||||||||| || | ||||||    
T  31189258 aaaatttataaaaatgaagaaatttgaatttcatagatttaaggtgttatttgaaattctataaatttaacttaaacaaaatacttcataagtttccatc 31189357  T
Q  132 attttaaaaattctcaaaattatcatccaa 161  Q
    || ||||||||| |  ||||||||| ||||    
T  31189358 atcttaaaaattatttaaattatcacccaa 31189387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 40493264 - 40493151
Alignment:
Q  48 aagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctca 147  Q
    ||||||||| ||||| |||   ||||| ||||||||||||| ||||||||| ||  || || ||||| |||| |||| | ||| | |||||| ||||||     
T  40493264 aagaaatttgaaatttctaatttttaggtgtcatttgaaatactctaaattgaacatgaacaaaatagttcataaattttcattactttaaacattctcc 40493165  T
Q  148 aaattatcatccaa 161  Q
    ||||||||||||||    
T  40493164 aaattatcatccaa 40493151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 48825026 - 48825111
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatc 155  Q
    ||||||||||| |||||||||| ||||||||| ||| || ||||| || | |||| |  |||||||||||||||||  ||||||||    
T  48825026 tttagatgtcagttgaaattctttaaatttaacttgaacaaaatattttataaatttttatcattttaaaaattcttcaaattatc 48825111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 30767492 - 30767413
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctc--taaatttaaattggactaaatacttcacaaat 124  Q
    |||||| ||| |||||| |||| ||||| |||||||||||||||||  ||||||||| ||| || |||||||||| ||||    
T  30767492 gaagaattttgaaattcttagcttttaggtgtcatttgaaattctctataaatttaacttgaacaaaatacttcataaat 30767413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 1796135 - 1796203
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattc 144  Q
    |||||||||||||||| ||||||||| ||  |  |||||||| | |||| | |||||||||||||||||    
T  1796135 tgtcatttgaaattctttaaatttaacttaaataaaatactttataaattttcatcattttaaaaattc 1796203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 30767238 - 30767174
Alignment:
Q  110 aaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||| |||| ||||||||||| ||||||||  ||||||| | |||| ||| ||||||||    
T  30767238 aaatacttcataaatttccatcattttgaaaattcttcaaattattacccaaacaatggaattca 30767174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 46199294 - 46199242
Alignment:
Q  93 taaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    ||||||||| |||||| |||||||| | |||| || |||||||||||||||||    
T  46199294 taaatttaatttggacaaaatactttataaatttcaatcattttaaaaattct 46199242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 29257238 - 29257365
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  29257238 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 29257337  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  29257338 caaattattatccaaacaatggaattca 29257365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 9982861 - 9982705
Alignment:
Q  17 tgaggaccaaaatgcaaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatact 116  Q
    |||||||| ||||| ||||||  ||||||  ||||||||| |||||| |||  |||||||||||||||||||||| ||||||||| ||| || |||||||    
T  9982861 tgaggacctaaatgaaaaatta-taagaataaagaaatttcaaattcttagtttttagatgtcatttgaaattctttaaatttaacttgaacaaaatact 9982763  T
Q  117 tcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||| |||| | ||||||||||||||||||  ||||||| ||| || ||| ||||||||    
T  9982762 tcataaattttcatcattttaaaaattcttcaaattattatctaaacaatggaattca 9982705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 40733988 - 40734117
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  40733988 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 40734087  T
Q  147 aaaattatcatccaatcaaaggaattcatc 176  Q
     ||||||| ||| || ||| ||||||||||    
T  40734088 caaattattatcaaaacaatggaattcatc 40734117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 29482694 - 29482821
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||  ||||  |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  29482694 gaagaaatttgaaattcttagtttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 29482793  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  29482794 caaattattatccaaacaatggaattca 29482821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 31980370 - 31980465
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaat 142  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| |||||    
T  31980370 gaagaaatttaaaattcttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaat 31980465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 33377184 - 33377311
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||  ||||| |||||||||||||||||||||||||| ||| || |||||||||  |||| ||||||||||| ||||| ||     
T  33377184 gaagaaatttgaaattcttagtttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcgtaaatttccatcattttgaaaatgctt 33377283  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  33377284 caaattattatccaaacaatggaattca 33377311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 34008977 - 34008850
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||  |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  34008977 gaagaattttgaaattcttaacttttatgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctt 34008878  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  34008877 taaattattatccaaacaatggaattca 34008850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 44346565 - 44346692
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| | || ||||| |||||||||||||||||||||||||| ||  || |||||||||| |||| ||||||||||| ||||| ||     
T  44346565 gaagaaatttgaaattctttgcttttaggtgtcatttgaaattctctaaatttaacttcaacaaaatacttcataaatttccatcattttgaaaatgctt 44346664  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  44346665 caaattattatccaaacaatggaattca 44346692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 15186675 - 15186831
Alignment:
Q  17 tgaggaccaaaatgcaaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatact 116  Q
    |||||||||||||| ||||||| ||| || ||| ||||||||||||| || | ||||| |||||||| ||| ||||||||||||| ||| || |||||||    
T  15186675 tgaggaccaaaatg-aaaatttataacaacgaaaaaatttaaaattcttaacttttaggtgtcatttaaaaatctctaaatttaacttgaacaaaatact 15186773  T
Q  117 tcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||| |||| ||||||| ||| ||||||||   |||||||| |||| |||  |||||||    
T  15186774 tcataaatttccatcaatttgaaaattcttttaattatcacccaaacaatagaattca 15186831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 24063673 - 24063807
Alignment:
Q  37 ttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcatttt 136  Q
    ||||||||||||| |||||| ||||||||||  ||||| |||||| |||||||||||||||||||  || || ||||| | || |||| | ||| |||||    
T  24063673 ttgtaagaaagaataaatttgaaattcctagactttaggtgtcatatgaaattctctaaatttaacctgaacaaaatattgcataaattttcattatttt 24063772  T
Q  137 aaaaattctcaaaattatcatccaatcaaaggaat 171  Q
     |||||| || |||||||||||||| ||| |||||    
T  24063773 gaaaattatccaaattatcatccaaacaatggaat 24063807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 14434 - 14339
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaat 142  Q
    |||||||||||||| || |||| ||||  |||||||||||||||||||||||||| ||| || | |||||||| |||| ||||||||||| |||||    
T  14434 gaagaaatttaaaactcttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaagatacttcataaatttccatcattttgaaaat 14339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 6416351 - 6416253
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||| ||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||| ||| || ||| ||||||||    
T  6416351 tgtcatttgaaattttctaaatttaagttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcaaaacaatggaattca 6416253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 1088181 - 1088289
Alignment:
Q  65 tagcgtttagatgtcatttgaaattctctaaatttaaa-ttggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatc 163  Q
    |||| ||||| ||||||||||||||||||||||||||| ||| || |||||||||| |||| || |||||||| ||||| ||  ||||||| |||||| |    
T  1088181 tagcttttaggtgtcatttgaaattctctaaatttaaacttgaacaaaatacttcataaatttctatcattttgaaaatgcttgaaattattatccaaac 1088280  T
Q  164 aaaggaatt 172  Q
    || ||||||    
T  1088281 aatggaatt 1088289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 13144756 - 13144652
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| ||||||||||||||||||||||| || ||| || |||||||||| ||||   ||||||||| ||||||||  ||||||| |||||| ||| |||    
T  13144756 tttaggtgtcatttgaaattctctaaattgaacttgaacaaaatacttcataaattctcatcattttgaaaattcttcaaattattatccaaacaatgga 13144657  T
Q  170 attca 174  Q
    |||||    
T  13144656 attca 13144652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 24045133 - 24045029
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| ||||||||||||||||||| |||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||| ||| | |||| ||| |||    
T  24045133 tttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatgga 24045034  T
Q  170 attca 174  Q
    |||||    
T  24045033 attca 24045029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 26520355 - 26520453
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||| ||||||||||||||| | ||| |  |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| ||||||||    
T  26520355 tgtcatttcaaattctctaaatttgacttgaataaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattca 26520453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 7668850 - 7668742
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| |||||| ||||||||||||||||| || | ||||  |||||||||||||||||| |||| || ||  || ||||| |||| |||| ||||||    
T  7668850 aaaatttataagaatgaagaaatttaaaattcttaccttttaagtgtcatttgaaattctcttaattaaacttaaacaaaatatttcataaatttccatc 7668751  T
Q  132 attttaaaa 140  Q
     ||||||||    
T  7668750 tttttaaaa 7668742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 31976507 - 31976599
Alignment:
Q  85 aaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcatct 177  Q
    ||||||||||||||||| ||| |  |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| | |||||||||    
T  31976507 aaattctctaaatttaatttgaataaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcatct 31976599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 24510165 - 24510271
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| |||||||||| || | ||||| |||| ||||||| | ||||||||||| ||  || |||||||||| |||| ||||||||||||||||||||     
T  24510165 gaagaattttaaaattcttaacttttag-tgtcttttgaaagtttctaaatttaactttaacaaaatacttcataaatttccatcattttaaaaattctt 24510263  T
Q  147 aaaattat 154  Q
     |||||||    
T  24510264 caaattat 24510271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 33986215 - 33986093
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    |||| |||||| || |||||| ||| |||||| || | ||||| |||||||| ||||||||||||||| | |||  | ||||||||||  ||| ||||||    
T  33986215 aaaaattgtaacaatgaagaattttgaaattcttaacttttaggtgtcatttcaaattctctaaatttgacttgaccaaaatacttcatgaatttccatc 33986116  T
Q  132 attttaaaaattctcaaaattat 154  Q
    ||||| ||||||||  |||||||    
T  33986115 attttgaaaattcttcaaattat 33986093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 36625141 - 36625219
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattat 154  Q
    |||||||||||||||| ||||||||| |||  | |||||||||| |||| ||||||||||| ||||||||  |||||||    
T  36625141 tgtcatttgaaattctttaaatttaacttgatcaaaatacttcataaatttccatcattttgaaaattcttcaaattat 36625219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 7079541 - 7079412
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| ||| |||||| || | ||||| | |||||||||||||||||||||||| ||| |  |||||||||  |||| | ||||    
T  7079541 aaaatttataacaatgaagaattttgaaattcttaacttttaggtatcatttgaaattctctaaatttaacttgaataaaatacttcttaaattttcatc 7079442  T
Q  132 attttaaaaattctcaaaattatcatccaa 161  Q
     |||| ||||||||  ||||||| ||||||    
T  7079441 gttttgaaaattctttaaattattatccaa 7079412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 8049415 - 8049336
Alignment:
Q  82 ttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    ||||| |||||||||||||| ||| || |||||||||| |||| || |||||||| ||||||||  ||||||| ||||||    
T  8049415 ttgaagttctctaaatttaacttgaacaaaatacttcataaatttcaatcattttgaaaattcttcaaattattatccaa 8049336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 10593267 - 10593153
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| |||||||||| || |  |||| ||| |||||||||||||||||||||| ||| || ||||| |||| |||  |  |||||||| ||||||||     
T  10593267 gaagaattttaaaattcttaactcttaggtgttatttgaaattctctaaatttaacttgaacaaaatatttcataaagtttaatcattttgaaaattctt 10593168  T
Q  147 aaaattatcatccaa 161  Q
     ||||||| ||||||    
T  10593167 caaattattatccaa 10593153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 33422914 - 33423003
Alignment:
Q  70 tttagatgtcatttgaaa-ttctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatc 158  Q
    ||||| |||||||||||| |||||||||||||| |||||| ||||| |||| |||| | || ||||||||||| | |  |||||||||||    
T  33422914 tttaggtgtcatttgaaaattctctaaatttaatttggacaaaatagttcataaatttacaccattttaaaaaattttcaaattatcatc 33423003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 35404614 - 35404723
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| | | |||||| || | ||||| ||||||||| |||||| | ||||||| ||| || |||||||||| |||| || |||    
T  35404614 aaaatttttaataatgaagaattatgaaattcttaacctttaggtgtcatttgtaattctttgaatttaacttgaacaaaatacttcataaatttctatc 35404713  T
Q  132 attttaaaaa 141  Q
    ||||||||||    
T  35404714 attttaaaaa 35404723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 29611556 - 29611484
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttca 119  Q
    |||||||||| |||||| |||| ||||  ||| |||||||||||||||||||||| ||| || ||||| ||||    
T  29611556 gaagaaatttgaaattcttagcttttaagtgttatttgaaattctctaaatttaacttgaacaaaatatttca 29611484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 34388640 - 34388576
Alignment:
Q  110 aaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||| |||| ||||||||||||||| ||||  ||||||| |||||| ||| ||||||||    
T  34388640 aaatacttcataaatttccatcattttaaaagttctttaaattattatccaaacaatggaattca 34388576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 15718382 - 15718279
Alignment:
Q  58 aaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcat 157  Q
    |||||| |||| ||||||| |||||||||||| ||||||||||| ||  || |||| ||||  |||| | ||||||||| |||| |||  |||||| |||    
T  15718382 aaattcttagcttttagatatcatttgaaattatctaaatttaacttaaacaaaatccttcctaaattttcatcattttgaaaactcttcaaattaacat 15718283  T
Q  158 ccaa 161  Q
    ||||    
T  15718282 ccaa 15718279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 6460773 - 6460871
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    |||||| ||| ||||||||| | || || ||||||||||| || | ||||||||| ||| || ||||| |||| |||| ||||||||||| ||| ||||    
T  6460773 gaagaagtttgaaattcctaactttcaggtgtcatttgaacttatttaaatttaacttgaacaaaataattcataaatttccatcattttgaaatttct 6460871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 28324580 - 28324676
Alignment:
Q  78 tcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||||||||| ||| ||| |||||| ||| || |||||| ||| |||| ||||||||||| ||||||||  ||| ||| |||||| ||| | ||||||    
T  28324580 tcatttgaatttccctacatttaacttgaacaaaatacctcataaatttccatcattttgaaaattcttcaaactattatccaaacaatgtaattca 28324676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 6e-28; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 8475357 - 8475230
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  8475357 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 8475258  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  8475257 caaattattatccaaacaatggaattca 8475230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 31413135 - 31412969
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||||| |||||||||||||||| ||||||||| ||| ||    
T  31413135 tgaggaccaaaatgcaaaatttgaaaaattataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttgaac 31413036  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcat 175  Q
    ||||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| |||||||||    
T  31413035 taaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcat 31412969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 26901641 - 26901749
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    ||||||||||||||||| | |  |||||||||||||||||||||  ||||||||| ||| || |||||||||| |||| || ||||||||||||||||||    
T  26901641 gaagaaatttaaaattctttgtttttagatgtcatttgaaattcaataaatttaacttgaacaaaatacttcataaatttctatcattttaaaaattctc 26901740  T
Q  147 aaaattatc 155  Q
    |||||||||    
T  26901741 aaaattatc 26901749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 29395389 - 29395510
Alignment:
Q  40 taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaa 139  Q
    |||||| |||||||||| |||| | || |||  ||||||||||||||||||| ||||||||| ||  || |||||||||  |||||||||||||||| ||    
T  29395389 taagaacgaagaaatttcaaatccttaacgtcgagatgtcatttgaaattctttaaatttaatttcaacaaaatacttcgtaaatctccatcattttgaa 29395488  T
Q  140 aattctcaaaattatcatccaa 161  Q
    ||||||| ||||||||||||||    
T  29395489 aattctccaaattatcatccaa 29395510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 1195528 - 1195402
Alignment:
Q  48 aagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctca 147  Q
    ||||||||| |||||| || | ||||| |||||||||||||||||||||||| | ||| || |||||||||| |||| ||||| ||||| ||||||||      
T  1195528 aagaaatttgaaattcttaacttttaggtgtcatttgaaattctctaaatttgacttgaacaaaatacttcataaatttccataattttgaaaattcttc 1195429  T
Q  148 aaattatcatccaatcaaaggaattca 174  Q
    ||||||| ||| || ||| ||||||||    
T  1195428 aaattattatctaaacaatggaattca 1195402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 10105234 - 10105121
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| ||||||||||  ||||| ||||||| |||||||||||||||||| ||| |  |||||||||| | || ||||||||||||||||| ||     
T  10105234 gaagaaatttgaaattcctagtttttaggtgtcatt-gaaattctctaaatttaacttgaataaaatacttcatacatttccatcattttaaaaatgctt 10105136  T
Q  147 aaaattatcatccaa 161  Q
     ||||||| ||||||    
T  10105135 caaattattatccaa 10105121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 6358128 - 6358235
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| || | ||||| |||||||||||| ||||||||||||| |||||| |||| ||| | |||| ||||| ||||| ||||||||     
T  6358128 gaagaaatttgaaattcttatcttttaggtgtcatttgaaactctctaaatttaacttggacaaaatgcttaataaatttccattattttgaaaattctt 6358227  T
Q  147 aaaattat 154  Q
     |||||||    
T  6358228 caaattat 6358235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 9697629 - 9697531
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||||||||||||||| ||| || |||||||||| |||| | ||||||||| |||||||   ||| ||| |||||| ||| ||||||||    
T  9697629 tgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaattttcatcattttgaaaattcatcaaactattatccaaacaatggaattca 9697531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 15616271 - 15616365
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||| ||||||||||||||||| ||| || |||||||||| |||| | ||||||||||||||||||  ||||||| |||||| |||  |||||||    
T  15616271 atttaaaattctctaaatttaacttgaacaaaatacttcataaatttgcatcattttaaaaattctttaaattattatccaaacaatagaattca 15616365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 28918337 - 28918234
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||||| ||||||| ||| || ||||| |||| |||| ||||||||||| ||||| ||  ||||||| |||||| ||| | |    
T  28918337 tttaggtgtcatttgaaattctctgaatttaacttgaac-aaatatttcataaatttccatcattttgaaaatccttcaaattattatccaaacaatgaa 28918239  T
Q  170 attca 174  Q
    |||||    
T  28918238 attca 28918234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 1368672 - 1368578
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaat 142  Q
    |||||| ||| |||||| || | ||||  |||||||||||||||||||||||||| ||| || ||||| |||| |||| ||||||||||| |||||    
T  1368672 gaagaattttgaaattcttaacttttaagtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaatttccatcattttgaaaat 1368578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 11409373 - 11409271
Alignment:
Q  51 aaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaa 150  Q
    |||||| |||||| |||| ||||  |||||||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| |||    
T  11409373 aaatttgaaattcttagcttttaagtgtcatttgaaattctttaaatttaacttggacaaaatacttcacaaatttccatcattttaaaaattctccaaa 11409274  T
Q  151 tta 153  Q
    |||    
T  11409273 tta 11409271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 17542197 - 17542362
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||||||||||||||||||||||||||||| || ||| ||    
T  17542197 tgaggaccaaaatgcaaaatttgaaaaaatataacaatgaagaattttgaaattcttaacttttagatgtcatttgaaattctctaaattcaacttgaac 17542296  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     |||||||||| |||| ||||||||||||||||||||  ||||||| || ||| ||| ||||||||    
T  17542297 aaaatacttcataaatttccatcattttaaaaattctttaaattattattcaaacaatggaattca 17542362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 41762089 - 41762216
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| ||| |||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  41762089 gaagaaatttgaaattcttagcttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 41762188  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  41762189 caaattattatccaaacaatggaattca 41762216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 17493032 - 17493170
Alignment:
Q  40 taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaa 139  Q
    |||||| ||||| |||| |||||| |||| ||| | |||||||||||||||| ||||||||| ||  |  |||||||| | |||| ||||||||||| ||    
T  17493032 taagaatgaagatatttgaaattcttagcttttcggtgtcatttgaaattctttaaatttaactttaaaaaaatactttataaatttccatcattttgaa 17493131  T
Q  140 aattctcaaaattatcatccaatcaaaggaattcatcta 178  Q
    ||||||| |||||||||||||| ||| ||||||||||||    
T  17493132 aattctccaaattatcatccaaacaatggaattcatcta 17493170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 28489636 - 28489532
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    |||||||||||||||||||||||||||||||| ||| || || ||||||| |||| ||||||||||||||||||||  ||||||| ||| || ||| |||    
T  28489636 tttagatgtcatttgaaattctctaaatttaacttgaacaaactacttcataaatttccatcattttaaaaattctttaaattattatcgaaacaatgga 28489537  T
Q  170 attca 174  Q
    |||||    
T  28489536 attca 28489532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 33146369 - 33146242
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||  |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  33146369 gaagaattttgaaattcttaacttttatgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctt 33146270  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  33146269 taaattattatccaaacaatggaattca 33146242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 40089653 - 40089798
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| ||    
T  40089653 tgaggaccaaaatgcaaaatttgaaaaaatataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaac 40089752  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattat 154  Q
     |||||||||| |||| ||||||||||| ||||||||  |||||||    
T  40089753 aaaatacttcataaatttccatcattttgaaaattctttaaattat 40089798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 927497 - 927371
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| ||||||||||||| |||||||||||| ||| || |||||||||| |||| ||||| ||||| ||||| ||     
T  927497 gaagaaatttgaaattcttagcttttaggtgtcatttgaaatcctctaaatttaacttgaacaaaatacttcataaatttccat-attttgaaaatgctt 927399  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  927398 caaattattatccaaacaatggaattca 927371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 34105305 - 34105137
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| ||||||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||  ||    
T  34105305 tgaggaccaaaatgcaaaatttggaaaattataacaaagaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttaaac 34105206  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcatct 177  Q
     |||||||||  |||| || |||||||| ||||||||  ||||||| |||||| ||| | |||||||||    
T  34105205 aaaatacttcgtaaatttctatcattttgaaaattcttcaaattattatccaaacaatgaaattcatct 34105137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 6772088 - 6772214
Alignment:
Q  48 aagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctca 147  Q
    ||||||||| |||||| |||| ||||  |||||||||||||||||||||||||| ||| || |||||||||| |||| |||||| |||| | |||| |      
T  6772088 aagaaatttgaaattcttagcttttacgtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcgttttgataattattc 6772187  T
Q  148 aaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||| ||| | ||||||    
T  6772188 aaattatcatccaaacaatgaaattca 6772214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 32249972 - 32250102
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||| ||||||| ||||||||| ||| |  |||||||||| ||||  |||||||||||||||||||     
T  32249972 gaagaattttgaaattcataacttttaggtgtcatttaaaattctttaaatttaacttgaataaaatacttcataaattaccatcattttaaaaattctt 32250071  T
Q  147 aaaattatcatccaatcaaaggaattcatct 177  Q
     ||||||| |||||| ||| |||||||||||    
T  32250072 taaattattatccaaacaatggaattcatct 32250102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 9894158 - 9894323
Alignment:
Q  17 tgaggaccaaaatgcaaaatttgtaaga--------aagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    ||||||||||||||||||||||| ||||        | |||||| ||| |||||| || | ||||| ||||||||||| |||||| ||||||| ||| ||    
T  9894158 tgaggaccaaaatgcaaaatttgaaagattataacaatgaagaattttgaaattcttaccttttaggtgtcatttgaatttctctgaatttaacttgaac 9894257  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     |||||||||| ||||  |||||||||| ||||||||  ||||||| |||||| ||| ||||||||    
T  9894258 aaaatacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattca 9894323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 35379515 - 35379421
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaa 165  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| |||| |||||| |||| |||  ||||||||||||||||||    
T  35379515 tttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccaccattttgaaaa-tcttcaaattatcatccaatcaa 35379421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 10314860 - 10314718
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| ||| |||||| || | ||||| |||||||||||||||| ||||||||| ||  || |||||||||| |||| | ||||    
T  10314860 aaaatttataacaacgaagaatttttaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttaaacaaaatacttcataaattttcatc 10314761  T
Q  132 attttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||||| ||||||||  ||||||| |||||| |||  |||||||    
T  10314760 attttgaaaattcttcaaattattatccaaacaatagaattca 10314718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 22303744 - 22303842
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    |||||| ||| |||||| || | ||||| ||||||||||||||||||| |||||| ||| || |||||||||| |||| ||||||||||| ||||||||    
T  22303744 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 22303842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 15270751 - 15270855
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||||||||||||| ||| |  |||||||||| |||| ||||||||||| || |||||  ||||||| || ||| ||| |||    
T  15270751 tttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcataaatttccatcattttgaatattctacaaattattattcaaacaatgga 15270850  T
Q  170 attca 174  Q
    |||||    
T  15270851 attca 15270855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 37241018 - 37241111
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||||| ||||||||| ||  || |||||||||| |||| ||||||||||||||||||||  ||||||| |||||| ||| ||||||||    
T  37241018 atttgaaattctttaaatttaacttcaac-aaatacttcataaatttccatcattttaaaaattcttcaaattattatccaaacaatggaattca 37241111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 31316324 - 31316243
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    |||||||||||||||||||||| ||  || |||| ||||| |||| |||||||||| |||||||||  ||||||||||||||    
T  31316324 atttgaaattctctaaatttaacttaaacaaaatgcttcataaatttccatcatttaaaaaattcttcaaattatcatccaa 31316243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 8264704 - 8264597
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||| ||||||||||||||||| ||| |  |||||||||| |||| |||||||||||  |||||||     
T  8264704 gaagaattttgaaattcttaacttttaggtgtcatttaaaattctctaaatttaacttgaataaaatacttcataaatttccatcattttggaaattctt 8264605  T
Q  147 aaaattat 154  Q
     |||||||    
T  8264604 caaattat 8264597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 12480102 - 12479996
Alignment:
Q  48 aagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctca 147  Q
    ||||| ||| |||||| |||| ||||| |||||||| |||||||||||||||   ||| || ||||||||||  ||| ||||||||||| ||||||||      
T  12480102 aagaattttgaaattcttagcttttaggtgtcatttcaaattctctaaatttgtcttgaacaaaatacttcatgaatttccatcattttgaaaattcttc 12480003  T
Q  148 aaattat 154  Q
    |||||||    
T  12480002 aaattat 12479996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 17444337 - 17444419
Alignment:
Q  80 atttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcatttt-aaaaattctcaaaattatcatccaa 161  Q
    |||||||||||||||||||||| |  ||| |||||||||| |||| ||||||||||| |||||||||| |||| || ||||||    
T  17444337 atttgaaattctctaaatttaactcagacaaaatacttcataaatttccatcattttgaaaaattctctaaatcattatccaa 17444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 158
Target Start/End: Original strand, 21541474 - 21541556
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatc 158  Q
    |||||||||||||||||||||||||| ||| || ||||| |||| | || || |||||||||||| |||| ||| ||||||||    
T  21541474 tgtcatttgaaattctctaaatttaacttgtacaaaataattcatagatttcaatcattttaaaatttcttaaagttatcatc 21541556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 30519170 - 30519085
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    |||||||||||||||| |||||| || ||| || |||||||||| ||||  |||||||||| ||||||||  ||||||| ||||||    
T  30519170 tgtcatttgaaattctttaaattgaacttgaacaaaatacttcataaattcccatcattttgaaaattcttcaaattattatccaa 30519085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 30559510 - 30559425
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    |||||||||||||||| |||||| || ||| || |||||||||| ||||  |||||||||| ||||||||  ||||||| ||||||    
T  30559510 tgtcatttgaaattctttaaattgaacttgaacaaaatacttcataaattcccatcattttgaaaattcttcaaattattatccaa 30559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 37241506 - 37241591
Alignment:
Q  81 tttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaa 166  Q
    ||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||| ||| |||||| ||||    
T  37241506 tttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaaatattatccaaacaaa 37241591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 8674314 - 8674419
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        |||||| ||| ||||||||||||| |||  ||||  |||||||||||||||||||||||||| ||| ||    
T  8674314 tgaggaccaaaatgcaaaatttgaaaaattataagaatgaataaatttaaaattcttagtttttatgtgtcatttgaaattctctaaatttaacttgaac 8674413  T
Q  109 taaata 114  Q
     |||||    
T  8674414 aaaata 8674419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 22768301 - 22768185
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||||| ||||||||||||||||||||||| || ||| ||    
T  22768301 tgaggaccaaaatgcaaaatttgaaaaaatataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaattcaacttgaac 22768202  T
Q  109 taaatacttcacaaatc 125  Q
     |||||||||| |||||    
T  22768201 aaaatacttcataaatc 22768185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 35111399 - 35111308
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    ||||| |||||||||||||||| ||||||||| ||  || |||||||||| |||| | ||||||||| ||| ||||  ||||||| ||||||    
T  35111399 tttaggtgtcatttgaaattctttaaatttaacttaaacaaaatacttcataaattttcatcattttgaaagttcttcaaattattatccaa 35111308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 11601227 - 11601121
Alignment:
Q  53 atttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaatt 152  Q
    |||| |||||| |||| ||||| ||| |||| ||||| ||||||||||| ||| || |||||||||| |||| ||||  ||||| ||||||||  |||||    
T  11601227 atttgaaattcttagcttttaggtgtaattt-aaattgtctaaatttaacttgaacaaaatacttcagaaat-tccacaattttgaaaattcttcaaatt 11601130  T
Q  153 atcatccaa 161  Q
    |||||||||    
T  11601129 atcatccaa 11601121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 6955360 - 6955457
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    |||| ||||| || ||| |||| ||| | |||||||||||||||||||||||||| ||  | ||||| ||| | ||| || ||||||||||||||||||    
T  6955360 gaaggaatttgaatttcttagctttttggtgtcatttgaaattctctaaatttaacttaaattaaattctttataaa-cttcatcattttaaaaattct 6955457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 8255170 - 8255117
Alignment:
Q  45 aagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatt 98  Q
    |||||||||||| |||||| || | ||||| |||| ||||||||||||||||||    
T  8255170 aagaagaaatttgaaattcttaacttttaggtgtcttttgaaattctctaaatt 8255117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 14834982 - 14834893
Alignment:
Q  85 aaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    ||||||||||||||||  ||| |  |||||||||| |||| | ||||||||| ||||||||  ||||||| |||||| ||| | ||||||    
T  14834982 aaattctctaaatttagcttgaaaaaaatacttcataaattttcatcattttgaaaattcttcaaattattatccaaacaatgaaattca 14834893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 17492585 - 17492649
Alignment:
Q  110 aaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |||||||||  |||| | ||||||||| ||||||||  |||||||||||||| ||| ||||||||    
T  17492585 aaatacttcttaaattttcatcattttgaaaattcttcaaattatcatccaaacaatggaattca 17492649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 8736280 - 8736445
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| ||    
T  8736280 tgaggaccaaaatgcaaaatttgaaaaaatataacaatgaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaac 8736379  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| ||| ||||||||    
T  8736380 aaaatacttcataaatttccatcattttgaaaattctttaaattattatccaaacaatggaattca 8736445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 769232 - 769105
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| ||| |||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  769232 gaagaaatttgaaattcttagcttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 769133  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  769132 caaattattatccaaacaatggaattca 769105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 1583686 - 1583813
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||| ||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  1583686 gaagaaatttgaaattcttagcttttaggtgtcatttaaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatactt 1583785  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  1583786 caaattattatccaaacaatggaattca 1583813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 7309640 - 7309767
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  7309640 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 7309739  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| ||||||  || ||||||||    
T  7309740 caaattattatccaaataatggaattca 7309767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 33189134 - 33189261
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| ||||| ||| |||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  33189134 gaagaaatttgaaattcttagcttttaggtgttatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 33189233  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  33189234 caaattattatccaaacaatggaattca 33189261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 44255830 - 44255703
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||  |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  44255830 gaagaaatttgaaatttttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctt 44255731  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| |||  |||||||    
T  44255730 caaattattatccaaacaatagaattca 44255703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 20935901 - 20935775
Alignment:
Q  48 aagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctca 147  Q
    ||||||||| |||||| || | ||||| |||||||||||||||||||||||||| ||  || |||||||||| |||| || |||||||| ||||||||      
T  20935901 aagaaatttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttaaacaaaatacttcataaatttcaatcattttgaaaattcttc 20935802  T
Q  148 aaattatcatccaatcaaaggaattca 174  Q
    |||||||||||||| ||| ||||||||    
T  20935801 aaattatcatccaaacaatggaattca 20935775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 740915 - 740790
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    |||| |||||| ||||||||||||| |||||  |||| ||||| | |||||||||||||||||||||||| ||| || |||||||||| |||| |||||     
T  740915 aaaaattgtaacaaagaagaaatttgaaattattagcttttaggtctcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatt 740816  T
Q  132 attttaaaaattctcaaaattatcat 157  Q
    ||||| ||||||||  ||||||||||    
T  740815 attttgaaaattcttcaaattatcat 740790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 7611765 - 7611892
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||||||||||| ||||||||| |||||| |||||||||| |||| ||||||||||| ||||||||     
T  7611765 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttggacaaaatacttcataaatttccatcattttgaaaattctt 7611864  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||| | |||||| ||| ||||||||    
T  7611865 caaattcttatccaaacaatggaattca 7611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 39630420 - 39630325
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaat 142  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| |||||    
T  39630420 gaagaaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaat 39630325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 45094348 - 45094475
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||     
T  45094348 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattctt 45094447  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||| | |||||| ||| ||||||||    
T  45094448 caaattcttatccaaacaatggaattca 45094475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 1730248 - 1730119
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || |||| ||||| |||| ||||||||||| ||||||||     
T  1730248 gaagaaatttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaattcttcataaat-tccatcattttgaaaattctt 1730150  T
Q  147 aaaattatcatccaatcaaaggaattcatct 177  Q
     ||||||| |||||| ||| | |||||||||    
T  1730149 caaattattatccaaacaatgaaattcatct 1730119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 11141500 - 11141374
Alignment:
Q  48 aagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctca 147  Q
    ||||||||| |||||| |||| ||||| |||||||| ||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||      
T  11141500 aagaaatttgaaattcttagcttttaggtgtcatttaaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatacttc 11141401  T
Q  148 aaattatcatccaatcaaaggaattca 174  Q
    ||||||| |||||| ||| | ||||||    
T  11141400 aaattattatccaaacaatgtaattca 11141374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 28021981 - 28022088
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||| || |||||| ||| |||| | |||||||||  |||||||     
T  28021981 gaagaaatttgaaattcctagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacctcataaattttcatcattttgcaaattctt 28022080  T
Q  147 aaaattat 154  Q
     |||||||    
T  28022081 caaattat 28022088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 30698477 - 30698350
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| ||||||||||||||||||| |||||| ||| || ||||||||||||||| ||||||||||| ||||||||     
T  30698477 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcacaaatttccatcattttgaaaattctt 30698378  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||| ||| |||||| ||| | ||||||    
T  30698377 caaactattatccaaacaatgaaattca 30698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 28740769 - 28740667
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  ||||||||||| || ||| |||    
T  28740769 tttaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattatcatctaaacaatgga 28740670  T
Q  170 att 172  Q
    |||    
T  28740669 att 28740667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 6749368 - 6749239
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    ||||||| ||| || |||||| ||| |||||| || | || || |||||||||||||||| ||||||||| ||| || |||||||||| |||| ||||||    
T  6749368 aaaatttataacaatgaagaattttgaaattcttaactttcaggtgtcatttgaaattctttaaatttaacttgaacaaaatacttcataaatttccatc 6749269  T
Q  132 attttaaaaattctcaaaattatcatccaa 161  Q
    ||||| ||||||||  ||||||| ||||||    
T  6749268 attttgaaaattcttcaaattattatccaa 6749239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 172
Target Start/End: Complemental strand, 3092460 - 3092353
Alignment:
Q  65 tagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatca 164  Q
    |||| ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| || |||||||| ||||| ||  ||||||| |||||| ||    
T  3092460 tagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttctatcattttgaaaatgcttgaaattattatccaaaca 3092361  T
Q  165 aaggaatt 172  Q
    | ||||||    
T  3092360 atggaatt 3092353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 35047560 - 35047683
Alignment:
Q  51 aaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaa 150  Q
    |||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||| | |||| ||||| ||||| ||||| ||  |||    
T  35047560 aaatttgaaattcttagcttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatactttataaatttccattattttgaaaatgcttcaaa 35047659  T
Q  151 ttatcatccaatcaaaggaattca 174  Q
    |||| |||||| ||  ||||||||    
T  35047660 ttattatccaaacattggaattca 35047683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 7167544 - 7167642
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    |||||| ||| |||||| || | ||||| ||||||||||||||||||| |||||| ||| || |||||||||| |||| ||||||||||| ||||||||    
T  7167544 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 7167642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 14306684 - 14306798
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| || | ||||| |||||||||||||||| ||||||||| ||| || ||||| |||| |||| | |||||||||||||||| |     
T  14306684 gaagaaatttgaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaaataattcataaattttcatcattttaaaaattatt 14306783  T
Q  147 aaaattatcatccaa 161  Q
     ||||||| ||||||    
T  14306784 taaattattatccaa 14306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 2274677 - 2274797
Alignment:
Q  58 aaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcat 157  Q
    |||||| |||| ||||  |||||||||||||||||||||||||| ||| || |||| ||||| |||||||||||||||| |||| ||||  |||| | ||    
T  2274677 aaattcttagcttttatgtgtcatttgaaattctctaaatttaacttgaacaaaattcttcataaatctccatcattttgaaaaatctc-caattcttat 2274775  T
Q  158 ccaatcaaaggaattcatctaa 179  Q
    |||| ||| |||||| ||||||    
T  2274776 ccaaacaatggaattgatctaa 2274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 41585596 - 41585681
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    |||||||||||||||| ||||||||| ||  || |||||||||| |||| ||||||||||||||||||||  ||||||| ||||||    
T  41585596 tgtcatttgaaattctttaaatttaacttcaacaaaatacttcataaatttccatcattttaaaaattcttcaaattattatccaa 41585681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 32840031 - 32840196
Alignment:
Q  17 tgaggaccaaaatgcaaaatttg--------taagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggac 108  Q
    |||||||||||||||||||||||        ||| || |||||||||| |||||| |||| ||||| ||| |||| ||||||||||||||| | |||  |    
T  32840031 tgaggaccaaaatgcaaaatttgaaaaattataacaatgaagaaatttgaaattcttagcttttaggtgttatttcaaattctctaaatttgacttgacc 32840130  T
Q  109 taaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
     ||||||||||  ||| ||||||||||| ||||||||  ||||||| |||||| ||| | ||||||    
T  32840131 aaaatacttcatgaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattca 32840196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 12263599 - 12263528
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaa 141  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||    
T  12263599 tttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaa 12263528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 13017974 - 13017848
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || ||||| |||| |||| | ||||||||| ||||| ||     
T  13017974 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaattttcatcattttgaaaatcctt 13017876  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  13017875 caaattattatccaaacaatggaattca 13017848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 17905848 - 17905735
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| ||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || ||||| |||| |||| ||||||||||| ||||| ||     
T  17905848 gaagaattttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaac-aaatatttcataaatttccatcattttgaaaatcctt 17905750  T
Q  147 aaaattatcatccaa 161  Q
     ||||||| ||||||    
T  17905749 caaattattatccaa 17905735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 42941121 - 42941047
Alignment:
Q  53 atttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctcca 129  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||| ||| || |||||||||| |||| ||||    
T  42941121 atttaaaattcctagcttttagat--catttgaaattctctaaatttaacttgaacaaaatacttcataaatttcca 42941047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 7227912 - 7227987
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattct 145  Q
    ||||| |||||||||||||| |||| |||||| ||| || |||||||||| |||| ||||||||||| ||||||||    
T  7227912 tttaggtgtcatttgaaattttctacatttaacttgaacaaaatacttcataaatttccatcattttgaaaattct 7227987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 32839498 - 32839652
Alignment:
Q  19 aggaccaaaatgcaaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttc 118  Q
    |||||||||||||||||||  ||| || |||||| ||| |||||| || | ||||| ||||| || ||||||||||||||| | |||  | |||||||||    
T  32839498 aggaccaaaatgcaaaatta-taacaatgaagaattttgaaattcttaacttttaggtgtcacttcaaattctctaaatttgacttgaccaaaatacttc 32839596  T
Q  119 acaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattca 174  Q
    |  ||  ||||||||||  ||||||||  ||||||| |||||| ||| ||||||||    
T  32839597 atgaaattccatcatttggaaaattcttcaaattattatccaaacaatggaattca 32839652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 767345 - 767263
Alignment:
Q  71 ttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaatta 153  Q
    |||| ||||||||||||||||| ||||| || |||||| ||| |||||| |||| ||||||||||||||| || || ||||||    
T  767345 ttaggtgtcatttgaaattctcaaaattgaacttggacaaaaaacttcataaatttccatcattttaaaatttttccaaatta 767263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 21504622 - 21504516
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| ||||||||||||| |||||||||||| ||| || |||||||||| ||||   | ||||||| ||||||||  ||||||| || ||| ||| |||    
T  21504622 tttaggtgtcatttgaaat-ctctaaatttaacttgaacaaaatacttcataaattaacttcattttgaaaattcttcaaattattattcaaacaatgga 21504524  T
Q  170 attcatct 177  Q
    ||||||||    
T  21504523 attcatct 21504516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 11981626 - 11981708
Alignment:
Q  90 ctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaatt 172  Q
    |||||||||||| |||||| ||| ||| || |||| |  |||||||||||||||||| ||||| |||||||| ||| ||||||    
T  11981626 ctctaaatttaacttggacaaaacactccataaatttttatcattttaaaaattctctaaattctcatccaaacaatggaatt 11981708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 29278863 - 29278983
Alignment:
Q  17 tgaggaccaaaatgcaa--aatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaata 114  Q
    |||||||||||||||||  ||||| |||||| ||| |||||| || ||| |||| |||||||  ||||||| |||||| |||||||| ||| |  |||||    
T  29278863 tgaggaccaaaatgcaatcaattt-taagaatgaataaatttgaatttcttagcttttagataccatttgatattctcgaaatttaacttgaataaaata 29278961  T
Q  115 cttcacaaatctccatcatttt 136  Q
    ||||| |||| | |||||||||    
T  29278962 cttcataaatgttcatcatttt 29278983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 11036507 - 11036431
Alignment:
Q  78 tcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattat 154  Q
    |||||| ||||||| ||||||  | ||| || |||||||||| |||| ||||||||||||||||||||  |||||||    
T  11036507 tcattttaaattctttaaattatacttgaacaaaatacttcataaatttccatcattttaaaaattcttcaaattat 11036431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 11606925 - 11606821
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatc 131  Q
    |||| |||||| || |||||| ||| |||||| || | ||||| |||||||||||||||| ||||||||| |||  | |||||||| | |||| || |||    
T  11606925 aaaaattgtaacaatgaagaatttttaaattcttaacttttaggtgtcatttgaaattctataaatttaacttgagcaaaatacttaataaatttctatc 11606826  T
Q  132 atttt 136  Q
    |||||    
T  11606825 atttt 11606821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 11595020 - 11594951
Alignment:
Q  32 aaaatttgtaagaaagaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaa 101  Q
    |||| |||||| || |||||| ||| |||||| || | ||||| |||||||||||||||| |||||||||    
T  11595020 aaaaattgtaacaatgaagaatttttaaattcttaacttttaggtgtcatttgaaattctataaatttaa 11594951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 11595456 - 11595415
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatactt 117  Q
    |||||||||||||||||||||||||| ||| || ||||||||    
T  11595456 tgtcatttgaaattctctaaatttaacttgaacaaaatactt 11595415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 11607358 - 11607317
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatactt 117  Q
    |||||||||||||||||||||||||| ||| || ||||||||    
T  11607358 tgtcatttgaaattctctaaatttaacttgaacaaaatactt 11607317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 44205557 - 44205649
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaat-acttcacaaatctccatcattttaaaaattctcaaaattatcatccaa 161  Q
    ||||| |||||||||||||| | ||||||||| ||| |  |||  |||||| |||| ||||||||||| ||||||||  || |||||||||||    
T  44205557 tttaggtgtcatttgaaattttttaaatttaacttgaataaaaacacttcataaatttccatcattttcaaaattcttcaatttatcatccaa 44205649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 4375 - 4502
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  4375 gaagaaatttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 4474  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  4475 caaattattatccaaacaatggaattca 4502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 174
Target Start/End: Original strand, 5019 - 5146
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| || | ||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| ||||| ||     
T  5019 gaagaaatttgaaattcttaacttttaggtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaatgctt 5118  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  5119 caaattattatccaaacaatggaattca 5146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 221073 - 221168
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaat 142  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| |||||    
T  221073 gaagaaatttaaaattcttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaat 221168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 223626 - 223721
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaat 142  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||| |||||    
T  223626 gaagaaatttaaaattcttagcttttaagtgtcatttgaaattctctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaat 223721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 3062 - 2935
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||||| |||||| |||| || || |||||||| ||||||||||||||| | ||| || ||||| |||| |||| ||||||||||| ||||||||     
T  3062 gaagaaatttgaaattcttagctttaaggtgtcatttcaaattctctaaatttgacttgaacaaaatatttcataaatttccatcattttgaaaattctt 2963  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  2962 caaattattatccaaacaatggaattca 2935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 7347 - 7220
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||||| | |||||| | || ||||| |||||||||||||||||||||||||| ||| |  |||||||||  |||| ||||||||||| ||||| ||     
T  7347 gaagaaatatgaaattcttggcttttaggtgtcatttgaaattctctaaatttaacttgaataaaatacttcgtaaatttccatcattttgaaaatgctt 7248  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||||| |||||| ||| ||||||||    
T  7247 caaattattatccaaacaatggaattca 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 15772 - 15876
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcat 175  Q
    ||||||||||| |||||||||||||| ||| || | |||||||| ||||  |||||||||| ||||||||  ||||||| |||||| ||| ||||||||     
T  15772 tgtcatttgaagttctctaaatttaacttgaacaatatacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattcac 15871  T
Q  176 ctaag 180  Q
    |||||    
T  15872 ctaag 15876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 16285 - 16376
Alignment:
Q  81 tttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaatt 172  Q
    |||||||||||||| |||||| ||| || |||||||| | |||| ||||||||||||||||||||  |||| || |||||| ||| ||||||    
T  16285 tttgaaattctctacatttaacttgaacaaaatactttataaatttccatcattttaaaaattcttcaaatgattatccaaacaatggaatt 16376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 19685 - 19769
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattat 154  Q
    ||||| |||||||||||||| ||||||||||| ||| || |||||||||| |||| ||||||||||| ||||||||  |||||||    
T  19685 tttaggtgtcatttgaaattatctaaatttaacttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattat 19769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 50189 - 50311
Alignment:
Q  52 aatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaat 151  Q
    ||||| |||||| || | ||||| |||||||||||||||| ||||||||| ||| || || ||||||| |||| ||||||||||| |||| |||  ||||    
T  50189 aatttgaaattcttaacttttaggtgtcatttgaaattctttaaatttaacttgaacaaagtacttcataaatttccatcattttgaaaactcttcaaat 50288  T
Q  152 tatcatccaatcaaaggaattca 174  Q
    ||| || ||| ||| ||||||||    
T  50289 tattattcaaacaatggaattca 50311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 4247 - 4144
Alignment:
Q  70 tttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaagga 169  Q
    ||||| |||||||||||||||||||| ||||| ||  || |||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| |||  ||    
T  4247 tttaggtgtcatttgaaattctctaattttaactta-acaaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaataga 4149  T
Q  170 attca 174  Q
    |||||    
T  4148 attca 4144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 180
Target Start/End: Original strand, 2814 - 2918
Alignment:
Q  76 tgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaattcat 175  Q
    ||||||||||| || ||||||||||| ||| || | |||||||| ||||  |||||||||| ||||||||  ||||||| |||||| ||| ||||||||     
T  2814 tgtcatttgaagttatctaaatttaacttgaacaatatacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattcac 2913  T
Q  176 ctaag 180  Q
    |||||    
T  2914 ctaag 2918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 9497 - 9588
Alignment:
Q  81 tttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctcaaaattatcatccaatcaaaggaatt 172  Q
    |||||||||||||| |||||| ||| || |||||||| | |||| ||||||||||| ||||||||  |||| || |||||| ||| ||||||    
T  9497 tttgaaattctctacatttaacttgaacaaaatactttataaatttccatcattttgaaaattcttcaaatgattatccaaacaatggaatt 9588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 109226 - 109100
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaatttaaattggactaaatacttcacaaatctccatcattttaaaaattctc 146  Q
    |||||| |||||||||| || | ||||| |||||||||||||| ||||||||||| ||| |  |||||||| | |||| | ||||||||| ||||||||     
T  109226 gaagaattttaaaattcttaacttttaggtgtcatttgaaattatctaaatttaacttgaataaaatactttataaat-ttcatcattttgaaaattctt 109128  T
Q  147 aaaattatcatccaatcaaaggaattca 174  Q
     ||||| | |||||| ||| ||||||||    
T  109127 caaattcttatccaaacaatggaattca 109100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 11832 - 11926
Alignment:
Q  47 gaagaaatttaaaattcctagcgtttagatgtcatttgaaattctctaaattta-aattggactaaatacttcacaaatctccatcattttaaaa 140  Q
    |||||||||| |||||| |||| ||||| || ||||||||||||||||||||||   ||| || |||||||||| |||| | |||||||||||||    
T  11832 gaagaaatttgaaattcttagcttttaggtgccatttgaaattctctaaatttatctttgaacaaaatacttcataaattttcatcattttaaaa 11926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University