View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19913_high_23 (Length: 451)
Name: NF19913_high_23
Description: NF19913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19913_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 412; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 19 - 438
Target Start/End: Original strand, 38119513 - 38119932
Alignment:
| Q |
19 |
actgaagcatcaagaattataccagttttgactcctcttccttcagcgtctcctccgtcttattattccttctcaccttctgcattattcaaaatcatag |
118 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38119513 |
actgaagcatcaagaattataccagttttgacttctcttccttcagcgtctcctccgtcttattattccttctcaccttctgcattattcaaaatcatag |
38119612 |
T |
|
| Q |
119 |
caattgtaatggtttctggcatcatccattaaactgttaatgtgcatcagcattcatagatgctcataggaatttatgcctgcaactggttgctttttgt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38119613 |
caattgtaatggtttctggcatcatccattaaactgttgatgtgcatcagcattcatagatgctcataggaatttatgcctgcaactggttgctttttgt |
38119712 |
T |
|
| Q |
219 |
attagtttttgtatgccttccgagttctgattatacactcatacactttaataatggttatatatggaccggttacagttcagtgaattttattaatgtt |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38119713 |
attagtttttgtatgccttccgagttctgattatacactcatacactttaataatggttatatatggaccggttacagttcagtgaattttattaatgtt |
38119812 |
T |
|
| Q |
319 |
ttagcataagcatgatcttggcagaagatgatataattaactttacaggcttggtaatttaataagctcacgttcaaaagatgtcaaaaactttgtaaaa |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38119813 |
ttagcataagcatgatcttggcagaagatgatataattaactttacaggcttggtaatttaataagctcacgttcaaaagatgtcaaaaactttgtaaaa |
38119912 |
T |
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| Q |
419 |
tgctaaaaactatgaaacat |
438 |
Q |
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|||||||||||||||||||| |
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| T |
38119913 |
tgctaaaaactatgaaacat |
38119932 |
T |
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