View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19913_high_39 (Length: 375)
Name: NF19913_high_39
Description: NF19913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19913_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 18 - 345
Target Start/End: Original strand, 49009778 - 49010105
Alignment:
| Q |
18 |
aaggatatggtcgtgcattttctaggctatgttcggagacttttgagcaattaaattgtggatgtgaaatttaccattgcaaatgaaatccaaaacaaca |
117 |
Q |
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| T |
49009778 |
aaggatatggtcgtgcattttctaggctatgttcggagacttttgagcaattaaattgtggatgtgaaatttaccattgcaaatgaaatccaaaacaaca |
49009877 |
T |
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| Q |
118 |
acatggatattgacaagtaggttaatagcattgccattaatcttagagagccatcaattgattgtcttcagagaaatatgatgctatactatactatgta |
217 |
Q |
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| T |
49009878 |
acatggatattgacaagtaggttaatagcattgccattaatcttagagagccatcaattaattgtcttcagagaaatatgatgctatactatactatgta |
49009977 |
T |
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| Q |
218 |
caatattgttttattgtaagatgtgaatgtttgcaaaaagaaatttctagagaccaagattttttattcgctgctttaatcaatgataggcgaggttgaa |
317 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49009978 |
caatattgttttattgtaagatatgaatgtttgcaaaaagaaatttctagagaccaagattttttattcgctgctttaatcaatgataggcgaggttgaa |
49010077 |
T |
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| Q |
318 |
ttatttgttttctagacatgtttaagat |
345 |
Q |
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|||||| ||||||||||||||||||||| |
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| T |
49010078 |
ttatttattttctagacatgtttaagat |
49010105 |
T |
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