View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19913_high_49 (Length: 323)
Name: NF19913_high_49
Description: NF19913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19913_high_49 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 18 - 316
Target Start/End: Original strand, 35677964 - 35678262
Alignment:
| Q |
18 |
aacattaccatacccaacacctgcatgtgtaaacccatccaaatcaaccttatcatcattttcttcaccaagtaacatagcttccaattcctcagaatcc |
117 |
Q |
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| T |
35677964 |
aacattaccatacccaacacctgcatgtgtaaacccatccaaatcaaccttatcatcattttcttcaccaagtaacatagcttccaattcctcagaatcc |
35678063 |
T |
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| Q |
118 |
caatcagactcatcatcaattgacccattatcctcttcttcacattcatcctcttcatcatctaattcataatcctccttagaaaatgtttcaattttta |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
35678064 |
caatcagactcatcatcaattgacccattatcctcttcttcaccatcatcctcttcatcatctaattcataatcctcctcagaaaatgtttcaattttta |
35678163 |
T |
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| Q |
218 |
cctctttttgttggtaaaaaccagggagatttggatcagtatcttgcatgaaaattccacaaccagggcaaatgggtccaagagcttcatcttcatctc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35678164 |
cctctttttgttggtaaaaaccagggagatttggatcattatcttgcatgaaaattccacaaccagggcaaatgggtccaagagcttcatcttcatctc |
35678262 |
T |
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