View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19913_low_108 (Length: 220)
Name: NF19913_low_108
Description: NF19913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19913_low_108 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 31778865 - 31778676
Alignment:
| Q |
14 |
atcagatctaacatctggcttcgggtgacccatgtgggcaaacaacaacttaattcctgaacaactttctctttttcctcatcatttagcaacgtaggat |
113 |
Q |
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| T |
31778865 |
atcagatctaacatctggcttcgggtgacccatgtgggcaaacaacaacttaattcctgaacaactttctctttttcctcatcatttagcaacgtaggat |
31778766 |
T |
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| Q |
114 |
cttctatgcaagtttctcccatacaaaatgatagactcatagcaacatcctgatcaatacttttatcccctcccacatcagacggcttca |
203 |
Q |
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| T |
31778765 |
cttctatgcaagtttctcccatacaagatgatagactcatagcaacatcctgatcaatacttttatcccctcccacatcagacggcttca |
31778676 |
T |
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