View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19913_low_80 (Length: 250)
Name: NF19913_low_80
Description: NF19913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19913_low_80 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 35678477 - 35678243
Alignment:
| Q |
16 |
ctctacaattgcacttccctccacaaacctcacttccaaaccatccatcttaaacaacacttcacattctcacgcacttcgccatttctcaggtaatact |
115 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35678477 |
ctctacaattgcacttccctccacaaacgtcacttccaaactatccatcttaaacaacacttcacattctcacgcacttcgccatttctcaggtaatact |
35678378 |
T |
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| Q |
116 |
actaaacgctttcataaagcttcctcctttattgcttttgctgtgaagaacaaccccaccataagaaaaaccactccaagaagagatagtagaaacccac |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35678377 |
actaaacgctttcataaagcttcctcctttattgcttttgctgtgaagaacaaccccaccataagaaaaaccactccaagaagagatagtagaaacccac |
35678278 |
T |
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| Q |
216 |
ttttaagtgaaggtagagatgaagatgaagctctt |
250 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
35678277 |
ttttaagtgaaggtagagatgaagatgaagctctt |
35678243 |
T |
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