View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19913_low_83 (Length: 246)
Name: NF19913_low_83
Description: NF19913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19913_low_83 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 24188241 - 24188470
Alignment:
| Q |
1 |
tttatctatttaatttaaattttgatagtgtgatattttgttgtccaatttttatgttatgcactaattgtcattttaagtgatgcaataagattgttgt |
100 |
Q |
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| T |
24188241 |
tttatctatttaatttaaattttgaaagtgagatattttgttgtccaatttttatgttatgcactaattgtcattttaagtgatgcaataagattgttgt |
24188340 |
T |
|
| Q |
101 |
cgttgaagcatgaaaatacataaatgacatataaagagaaactcatgaagatacatatatgatatgtattacagtctaacaagtgaaatagagattttgt |
200 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
24188341 |
cgttgaagcatgaaaatacatacatgacatataaagagaaactcatgaaaatacatatatgatatgtatt--agtctaacaagtgaaatagagattttgt |
24188438 |
T |
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| Q |
201 |
cgcttaaagttaatttaagaggacttgtatat |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
24188439 |
cgcttaaagttaatttaagaggacttgtatat |
24188470 |
T |
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