View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19914_high_1 (Length: 819)

Name: NF19914_high_1
Description: NF19914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19914_high_1
NF19914_high_1
[»] chr3 (37 HSPs)
chr3 (1-408)||(12064090-12064501)
chr3 (406-630)||(12064536-12064771)
chr3 (657-762)||(12064769-12064873)
chr3 (681-762)||(51348928-51349008)
chr3 (693-760)||(29436832-29436899)
chr3 (683-754)||(21652807-21652878)
chr3 (669-739)||(40250267-40250336)
chr3 (689-762)||(6752940-6753012)
chr3 (672-740)||(31289118-31289186)
chr3 (672-740)||(42662493-42662561)
chr3 (681-756)||(45030052-45030127)
chr3 (672-740)||(9795332-9795400)
chr3 (672-740)||(20394026-20394094)
chr3 (696-762)||(22949179-22949245)
chr3 (672-745)||(32758642-32758715)
chr3 (672-740)||(390562-390630)
chr3 (672-740)||(7673941-7674009)
chr3 (672-740)||(17378350-17378418)
chr3 (672-740)||(22926215-22926283)
chr3 (671-751)||(25372030-25372110)
chr3 (672-740)||(27038927-27038995)
chr3 (672-740)||(29675038-29675106)
chr3 (672-740)||(30190502-30190570)
chr3 (672-740)||(31725801-31725869)
chr3 (672-740)||(34816939-34817007)
chr3 (672-740)||(41265690-41265758)
chr3 (672-740)||(41936087-41936155)
chr3 (672-740)||(43109771-43109839)
chr3 (672-740)||(43185523-43185591)
chr3 (672-740)||(47109097-47109165)
chr3 (676-740)||(50622540-50622604)
chr3 (672-740)||(52679622-52679690)
chr3 (672-740)||(54240860-54240928)
chr3 (672-703)||(292246-292277)
chr3 (681-739)||(118818-118876)
chr3 (663-737)||(14343788-14343861)
chr3 (688-754)||(22529297-22529363)
[»] chr2 (34 HSPs)
chr2 (670-762)||(26775270-26775363)
chr2 (669-756)||(3242657-3242744)
chr2 (668-736)||(30737883-30737951)
chr2 (681-759)||(43248431-43248509)
chr2 (672-740)||(2048032-2048100)
chr2 (672-740)||(9527630-9527698)
chr2 (672-740)||(18449964-18450032)
chr2 (672-740)||(22060826-22060894)
chr2 (672-740)||(38993664-38993732)
chr2 (672-740)||(40649230-40649298)
chr2 (672-745)||(22375053-22375126)
chr2 (672-740)||(518642-518710)
chr2 (672-740)||(3870935-3871003)
chr2 (672-740)||(4826470-4826538)
chr2 (672-740)||(5748492-5748560)
chr2 (672-740)||(6596645-6596713)
chr2 (672-740)||(9110810-9110878)
chr2 (672-740)||(11216771-11216839)
chr2 (676-740)||(14723978-14724042)
chr2 (672-740)||(16268167-16268235)
chr2 (672-740)||(21134441-21134509)
chr2 (672-740)||(21289030-21289098)
chr2 (672-740)||(26849857-26849925)
chr2 (672-740)||(29412009-29412077)
chr2 (672-740)||(30549604-30549672)
chr2 (672-740)||(34036277-34036345)
chr2 (672-740)||(34213295-34213363)
chr2 (672-740)||(35669865-35669933)
chr2 (672-740)||(36068283-36068351)
chr2 (672-740)||(37111036-37111104)
chr2 (672-740)||(43521428-43521496)
chr2 (672-739)||(6026886-6026953)
chr2 (681-756)||(41635503-41635578)
chr2 (683-737)||(15242838-15242892)
[»] chr8 (40 HSPs)
chr8 (688-762)||(38047335-38047409)
chr8 (670-756)||(3073407-3073493)
chr8 (657-762)||(28339467-28339572)
chr8 (669-754)||(34675373-34675457)
chr8 (672-740)||(8738152-8738220)
chr8 (681-761)||(27988419-27988499)
chr8 (681-761)||(28045721-28045801)
chr8 (682-740)||(11094266-11094324)
chr8 (672-740)||(24333187-24333255)
chr8 (672-740)||(34865803-34865871)
chr8 (669-762)||(10005500-10005596)
chr8 (688-733)||(20166936-20166981)
chr8 (672-740)||(600085-600153)
chr8 (672-740)||(2099003-2099071)
chr8 (694-762)||(3098935-3099003)
chr8 (672-740)||(3562312-3562380)
chr8 (672-740)||(4174714-4174782)
chr8 (672-740)||(9470986-9471054)
chr8 (672-740)||(11181422-11181490)
chr8 (672-740)||(11714617-11714685)
chr8 (672-740)||(12000671-12000739)
chr8 (676-740)||(16422039-16422103)
chr8 (672-740)||(27919460-27919528)
chr8 (672-740)||(28074307-28074375)
chr8 (672-740)||(28868900-28868968)
chr8 (672-740)||(30597082-30597150)
chr8 (672-740)||(31692912-31692980)
chr8 (672-740)||(37954204-37954272)
chr8 (672-740)||(39629021-39629089)
chr8 (672-740)||(39638571-39638639)
chr8 (672-740)||(41256235-41256303)
chr8 (681-740)||(14515547-14515606)
chr8 (672-747)||(17524607-17524682)
chr8 (674-740)||(14762520-14762586)
chr8 (672-734)||(32642434-32642496)
chr8 (682-760)||(37432180-37432258)
chr8 (672-753)||(27116715-27116796)
chr8 (672-745)||(36466795-36466868)
chr8 (696-745)||(38502014-38502063)
chr8 (671-740)||(42827520-42827589)
[»] chr5 (34 HSPs)
chr5 (669-760)||(35712174-35712265)
chr5 (669-754)||(16669315-16669403)
chr5 (669-755)||(22934813-22934899)
chr5 (672-740)||(37337193-37337261)
chr5 (669-741)||(38388816-38388887)
chr5 (670-737)||(1497258-1497325)
chr5 (672-740)||(9249107-9249175)
chr5 (692-756)||(29726357-29726421)
chr5 (671-734)||(16644726-16644789)
chr5 (672-740)||(439879-439947)
chr5 (672-740)||(2914602-2914670)
chr5 (672-740)||(4745611-4745679)
chr5 (672-740)||(5070962-5071030)
chr5 (672-740)||(5846841-5846909)
chr5 (672-740)||(9577508-9577576)
chr5 (672-740)||(14640035-14640103)
chr5 (676-740)||(15268312-15268376)
chr5 (676-740)||(16626424-16626488)
chr5 (672-740)||(22510579-22510647)
chr5 (672-740)||(22635572-22635640)
chr5 (672-740)||(27366268-27366336)
chr5 (672-740)||(27807777-27807845)
chr5 (672-740)||(29816383-29816451)
chr5 (672-740)||(31196088-31196156)
chr5 (672-740)||(32292632-32292700)
chr5 (672-740)||(32706910-32706978)
chr5 (672-740)||(34900035-34900103)
chr5 (672-740)||(38394161-38394229)
chr5 (672-740)||(39932989-39933057)
chr5 (672-740)||(40365326-40365394)
chr5 (681-740)||(11187433-11187492)
chr5 (688-762)||(23263866-23263941)
chr5 (669-740)||(29619249-29619320)
chr5 (672-762)||(29000750-29000840)
[»] chr6 (14 HSPs)
chr6 (668-762)||(25149344-25149437)
chr6 (657-740)||(34708174-34708257)
chr6 (672-740)||(30510789-30510857)
chr6 (672-738)||(12058748-12058814)
chr6 (674-740)||(30240385-30240451)
chr6 (672-725)||(7499643-7499696)
chr6 (672-740)||(4131031-4131099)
chr6 (680-740)||(7885143-7885203)
chr6 (672-740)||(10629351-10629419)
chr6 (672-740)||(11615532-11615600)
chr6 (672-740)||(16524552-16524620)
chr6 (672-740)||(24178406-24178474)
chr6 (653-708)||(33821111-33821166)
chr6 (670-740)||(21599368-21599437)
[»] chr7 (31 HSPs)
chr7 (669-758)||(46243906-46243995)
chr7 (699-762)||(36461277-36461340)
chr7 (681-737)||(3029581-3029637)
chr7 (672-740)||(31582014-31582082)
chr7 (682-760)||(34302590-34302666)
chr7 (672-740)||(9417637-9417705)
chr7 (672-740)||(17833092-17833160)
chr7 (672-740)||(32777985-32778053)
chr7 (674-740)||(19866313-19866379)
chr7 (688-733)||(44388644-44388689)
chr7 (672-740)||(4089720-4089788)
chr7 (672-740)||(5113897-5113965)
chr7 (672-740)||(12263829-12263897)
chr7 (672-740)||(21746821-21746888)
chr7 (672-740)||(22369683-22369751)
chr7 (672-740)||(25650992-25651060)
chr7 (672-740)||(27131352-27131420)
chr7 (672-740)||(29669451-29669519)
chr7 (672-740)||(31466227-31466295)
chr7 (672-740)||(35497835-35497903)
chr7 (672-740)||(39430260-39430328)
chr7 (672-740)||(39938767-39938835)
chr7 (672-740)||(40353668-40353736)
chr7 (672-740)||(40536819-40536887)
chr7 (672-740)||(42941068-42941136)
chr7 (676-740)||(45042153-45042217)
chr7 (672-726)||(30643068-30643122)
chr7 (682-740)||(40212291-40212348)
chr7 (672-749)||(4503663-4503740)
chr7 (682-727)||(31858387-31858432)
chr7 (672-740)||(42122080-42122149)
[»] chr4 (43 HSPs)
chr4 (681-754)||(24569427-24569500)
chr4 (681-737)||(9482600-9482656)
chr4 (672-740)||(41947598-41947666)
chr4 (669-756)||(47467587-47467674)
chr4 (699-753)||(52157023-52157077)
chr4 (684-737)||(40532831-40532884)
chr4 (672-740)||(388222-388290)
chr4 (672-740)||(22128899-22128967)
chr4 (672-740)||(23138214-23138282)
chr4 (672-740)||(23138396-23138464)
chr4 (672-740)||(25367278-25367346)
chr4 (676-740)||(31372403-31372467)
chr4 (672-740)||(37788054-37788122)
chr4 (672-740)||(42179494-42179562)
chr4 (672-740)||(43050344-43050412)
chr4 (671-714)||(48418942-48418985)
chr4 (681-751)||(1167524-1167594)
chr4 (681-751)||(1170006-1170076)
chr4 (717-759)||(52743069-52743111)
chr4 (672-753)||(6629037-6629117)
chr4 (672-745)||(34498246-34498319)
chr4 (672-740)||(288523-288591)
chr4 (672-740)||(2401403-2401471)
chr4 (672-740)||(13800509-13800577)
chr4 (672-740)||(19877932-19878000)
chr4 (672-740)||(22101094-22101162)
chr4 (676-740)||(22496499-22496563)
chr4 (672-740)||(23237179-23237247)
chr4 (672-740)||(30649620-30649688)
chr4 (672-740)||(33244803-33244871)
chr4 (672-740)||(38852671-38852739)
chr4 (672-740)||(39417978-39418046)
chr4 (672-740)||(42168456-42168524)
chr4 (672-740)||(42507570-42507638)
chr4 (672-740)||(43587844-43587912)
chr4 (672-740)||(51625016-51625084)
chr4 (672-740)||(54315232-54315300)
chr4 (681-759)||(1173248-1173326)
chr4 (682-740)||(34323265-34323323)
chr4 (671-740)||(13252200-13252269)
chr4 (672-740)||(16833638-16833706)
chr4 (682-739)||(42380659-42380716)
chr4 (672-725)||(43566188-43566241)
[»] chr1 (36 HSPs)
chr1 (669-760)||(35739802-35739892)
chr1 (672-740)||(10085890-10085958)
chr1 (682-760)||(32825621-32825699)
chr1 (672-740)||(2458667-2458735)
chr1 (672-740)||(8768483-8768551)
chr1 (672-740)||(25792326-25792394)
chr1 (672-740)||(52703548-52703616)
chr1 (669-740)||(24583963-24584034)
chr1 (669-740)||(24589677-24589748)
chr1 (684-739)||(31157834-31157889)
chr1 (657-756)||(34595979-34596072)
chr1 (672-725)||(487652-487705)
chr1 (672-740)||(1037493-1037561)
chr1 (672-740)||(1044399-1044467)
chr1 (672-740)||(4750234-4750302)
chr1 (672-740)||(6540498-6540566)
chr1 (672-740)||(7318611-7318679)
chr1 (672-740)||(8462315-8462383)
chr1 (672-740)||(15824150-15824218)
chr1 (672-740)||(16011095-16011163)
chr1 (672-740)||(23827498-23827566)
chr1 (672-740)||(29672481-29672549)
chr1 (672-740)||(31181354-31181422)
chr1 (672-740)||(31925101-31925169)
chr1 (672-740)||(35379548-35379616)
chr1 (672-740)||(39673532-39673600)
chr1 (672-740)||(42219621-42219689)
chr1 (672-740)||(45269007-45269075)
chr1 (672-740)||(49367273-49367341)
chr1 (672-740)||(50309740-50309808)
chr1 (709-740)||(51690923-51690954)
chr1 (672-738)||(3280895-3280961)
chr1 (682-740)||(3533421-3533479)
chr1 (682-740)||(6947789-6947847)
chr1 (672-722)||(7038005-7038055)
chr1 (671-740)||(32472879-32472948)
[»] scaffold0187 (2 HSPs)
scaffold0187 (672-740)||(10325-10393)
scaffold0187 (672-740)||(20653-20721)
[»] scaffold0024 (1 HSPs)
scaffold0024 (672-740)||(42715-42783)
[»] scaffold1515 (1 HSPs)
scaffold1515 (672-740)||(1624-1692)
[»] scaffold0284 (1 HSPs)
scaffold0284 (691-737)||(3086-3132)
[»] scaffold0130 (1 HSPs)
scaffold0130 (672-740)||(22912-22980)
[»] scaffold0037 (1 HSPs)
scaffold0037 (672-740)||(99041-99109)
[»] scaffold0027 (1 HSPs)
scaffold0027 (672-740)||(11028-11096)
[»] scaffold0011 (1 HSPs)
scaffold0011 (672-740)||(1421-1489)


Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-148; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 1 - 408
Target Start/End: Original strand, 12064090 - 12064501
Alignment:
Q  1 taaccgtgatggaattttgtcaaatttgtgataatttgaaagggtgaactaataaaaaatcacatgtaaatttgtcaaactcgagtgcaacatctttcaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||      
T  12064090 taaccgtgatgcaattttgtcaaatttgtgataatttgaaagggtgaactaataaataatcacatgtaaatttgtcaaactcgagtgcaacatctttccc 12064189  T
Q  101 tgaagtgttataagagtattgtttaaagaatcc-tgtataaaagtactataatttaagaagtataagtcaatcacataaaaataattagtagacaatttc 199  Q
    || |||||||||||| ||||||||||||||||| ||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  12064190 tgtagtgttataagaatattgtttaaagaatccgtgtataaaaata---taatttaagaagtataagtcaatcacataaaaataattagtagacaacttt 12064286  T
Q  200 ctacctaaaagatattacttttaattgtttaaacaatgttctaagagcatttctgatgacaaatttgtaagaaactcaaacttgtttcataattacgatt 299  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12064287 ctacctaaaagatattatttttaattgtttaaataatgttctaagagcatttctgatgacaaatttgtaagaaactcaaacttgtttcataattacgatt 12064386  T
Q  300 aagtgatttcgacaatatcacatca-------catatatgcaactcaaacatattctactctaatgatnnnnnnntattaagcaacttttataaaactta 392  Q
    |||||| |||||||||||||||| |       ||||||||||||||||| ||||| ||||||||| ||        |||||||||||||||||||||| |    
T  12064387 aagtgacttcgacaatatcacattacacatatcatatatgcaactcaaaaatattttactctaataataaaaaac-attaagcaacttttataaaactca 12064485  T
Q  393 cacaattaatgatttt 408  Q
    || |||||||||||||    
T  12064486 cataattaatgatttt 12064501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 406 - 630
Target Start/End: Original strand, 12064536 - 12064771
Alignment:
Q  406 tttcaaccttttgtttgctacacataccgctacatcatgcatggttcctcttgtgagaataaacataggcaatggttcatcattctataaaaatcact-- 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||      
T  12064536 tttcaaccttttgtttgctacacataccgctacatcatgcatggttcctctggtgagaataaacataagcaatggttcatcattctataaaaatcactca 12064635  T
Q  504 -------------tagataatctaaaatagttgttagcannnnnnnatctttgataatataaatgtactcagaatctcataattcttnnnnnnnnncata 590  Q
                  ||||||||||||||| |||||||||       ||||||||||| ||||||||||| |||||||||||||||||         ||||    
T  12064636 gataccttcatcagagataatctaaaataattgttagca-ttttttatctttgataaaataaatgtacttagaatctcataattctt---aaaaaacata 12064731  T
Q  591 tttcagtttatttaatactccctccacattttattataag 630  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  12064732 tttcaatttatttaatactccctccgcattttattataag 12064771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 657 - 762
Target Start/End: Original strand, 12064769 - 12064873
Alignment:
Q  657 aagttgtttattcattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  12064769 aagttgtttattcattttcacacatattaaaaaatgtagttaattttgtattgaaaagataaattatgagtgattttac-aaatgatctcttattaatga 12064867  T
Q  757 catgag 762  Q
    ||||||    
T  12064868 catgag 12064873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 681 - 762
Target Start/End: Original strand, 51348928 - 51349008
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| ||||| ||| ||| |||||||    
T  51348928 tattaagaaatgtagttaattttatattgaaaagagaaatt-tgaatgattttataaaattatctcatatcaataacatgag 51349008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 693 - 760
Target Start/End: Complemental strand, 29436899 - 29436832
Alignment:
Q  693 tagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatg 760  Q
    ||||||||||| ||||| ||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  29436899 tagttaattttgtattgcaaagaaaaactatgagtgattttacaaaattatctcttattaatgacatg 29436832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 683 - 754
Target Start/End: Original strand, 21652807 - 21652878
Alignment:
Q  683 ttaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaat 754  Q
    |||| |||||||||||||||| | ||||||||||||||||||| |||||||||||||| |||  ||||||||    
T  21652807 ttaaaaaatgtagttaattttgttttgaaaagagaaattatgaatgattttacaaaattatcctttattaat 21652878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 669 - 739
Target Start/End: Original strand, 40250267 - 40250336
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaa 739  Q
    |||||| |||| || |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  40250267 catttttacacatactaagaaatgtagttaattttgtattgaaaa-agaaactatgagtgattttacaaaa 40250336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 689 - 762
Target Start/End: Original strand, 6752940 - 6753012
Alignment:
Q  689 aatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||||  || ||||||| |||||||||    
T  6752940 aatgtagttaattttgtattgaaaaaa-aaattatgagtgattttacaaaattttcccttattattgacatgag 6753012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 31289118 - 31289186
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |||||||||||||||||||  |||||||||||    
T  31289118 tttcacacgtattaagaaatgtaattaatattgtgtggaaaagagaaattatgagttgttttacaaaat 31289186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 42662493 - 42662561
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | ||||||||| |||||||||  |||||||||||    
T  42662493 tttcacacgtattaagaaatgtaattaattttgtgtggaaaagagatattatgagttgttttacaaaat 42662561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 681 - 756
Target Start/End: Original strand, 45030052 - 45030127
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    ||||||||||| ||||||||||||| |||||||||||||||   ||||||||||||| || |||  ||||||||||    
T  45030052 tattaagaaatttagttaattttattttgaaaagagaaattgcaagtgattttacaagattatcatttattaatga 45030127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 9795400 - 9795332
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| |||| | |  ||||||||||||||||  |||||||||||    
T  9795400 tttcacacgtattaagaaatgtaattaatattatgtggggaagagaaattatgagttgttttacaaaat 9795332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 20394026 - 20394094
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  20394026 tttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 20394094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 696 - 762
Target Start/End: Complemental strand, 22949245 - 22949179
Alignment:
Q  696 ttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||| |||  | |||||| |||||||    
T  22949245 ttaattttatattgaaaagcgaaattataagtgattttacataattatcattcattaataacatgag 22949179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 745
Target Start/End: Complemental strand, 32758715 - 32758642
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatct 745  Q
    |||||||| |||||||||||||| ||||| |||| | | ||||||| |||||||||  ||||||||||| ||||    
T  32758715 tttcacacttattaagaaatgtaattaatattatgtgggaaagagatattatgagttgttttacaaaattatct 32758642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 390562 - 390630
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | || |||||| |||||||||  ||||| |||||    
T  390562 tttcacacgtattaagaaatgtaattaattttgtgtggagaagagatattatgagttgttttataaaat 390630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 7673941 - 7674009
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | ||| ||| |||||||||  |||||||||||    
T  7673941 tttcacacgtattaagaaatgtaattaattttgtgtgggaaatagatattatgagttgttttacaaaat 7674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 17378418 - 17378350
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  17378418 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 17378350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 22926283 - 22926215
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  22926283 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 22926215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 751
Target Start/End: Complemental strand, 25372110 - 25372030
Alignment:
Q  671 ttttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttatt 751  Q
    |||| ||||||||||| |||| ||||||||||| ||||| |||||||| || |||  ||||||| ||||| ||| ||||||    
T  25372110 ttttgacacgtattaaaaaatatagttaattttgtattggaaagagaatttctgaaagattttataaaattatcccttatt 25372030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 27038927 - 27038995
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| | |||||||||||| ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  27038927 tttcacacattttaagaaatgtaattaatattgtatggaaaagagatattatgagttgttttacaaaat 27038995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 29675106 - 29675038
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  29675106 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 29675038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 30190570 - 30190502
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  30190570 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 30190502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 31725869 - 31725801
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | | ||||||| |||||||||  |||||||||||    
T  31725869 tttcacacgtattaagaaatgtaattaatattgtgtgggaaagagatattatgagttgttttacaaaat 31725801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 34816939 - 34817007
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  34816939 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 34817007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 41265758 - 41265690
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  41265758 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 41265690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 41936155 - 41936087
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||| ||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  41936155 tttcacacgcattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 41936087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 43109839 - 43109771
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  43109839 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 43109771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 43185591 - 43185523
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  43185591 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 43185523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 47109097 - 47109165
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  47109097 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 47109165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 740
Target Start/End: Original strand, 50622540 - 50622604
Alignment:
Q  676 acacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||| |||||||||||||| ||||| |||| | ||||||||| |||||||||  |||||||||||    
T  50622540 acacatattaagaaatgtaattaatattatgtcgaaaagagatattatgagttgttttacaaaat 50622604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 52679622 - 52679690
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||  |||||||||||||| ||||| |||||| | ||||||| |||||||||  |||||||||||    
T  52679622 tttcacatatattaagaaatgtaattaatattatatgggaaagagatattatgagttgttttacaaaat 52679690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 54240860 - 54240928
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| |||| | | ||||||| |||||||||  |||||||||||    
T  54240860 tttcacacatattaagaaatgtaattaatattatgtgggaaagagatattatgagttgttttacaaaat 54240928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 703
Target Start/End: Original strand, 292246 - 292277
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaatttt 703  Q
    ||||||||||||||||||||||||||||||||    
T  292246 tttcacacgtattaagaaatgtagttaatttt 292277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 739
Target Start/End: Complemental strand, 118876 - 118818
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaa 739  Q
    |||||||||||| | ||| |||| ||| |||||||| |||||||||| |||||||||||    
T  118876 tattaagaaatggaattatttttgtatagaaaagagtaattatgagttattttacaaaa 118818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 737
Target Start/End: Original strand, 14343788 - 14343861
Alignment:
Q  663 tttattcattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaa 737  Q
    |||| ||||||| ||| ||||||||||||||| |||||||| |||  |||||||| |||||||||  ||||||||    
T  14343788 tttagtcatttt-acatgtattaagaaatgtaattaattttgtatgaaaaagagatattatgagttgttttacaa 14343861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 688 - 754
Target Start/End: Original strand, 22529297 - 22529363
Alignment:
Q  688 aaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaat 754  Q
    ||||| |||||||||| | ||| ||||| ||||||||  | |||||||||||| |||||||||||||    
T  22529297 aaatgaagttaattttgtgttggaaagataaattatggattattttacaaaattatctcttattaat 22529363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 6e-24; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 670 - 762
Target Start/End: Complemental strand, 26775363 - 26775270
Alignment:
Q  670 attttcacacgtattaagaaatgtagttaatttta-tattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    |||||||||| |||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||| | ||| |||||||||||||||||    
T  26775363 attttcacacatattaagaaatgtagttaatttttgtattggaaagataaattatgagtgattttacaaatttatcccttattaatgacatgag 26775270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 669 - 756
Target Start/End: Complemental strand, 3242744 - 3242657
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    ||||| ||||| || ||||||||| |||||||||||||||  |||||||||||| || |||||||||||||| |||||||||||||||    
T  3242744 catttccacacataataagaaatgcagttaattttatattagaaagagaaattacgaatgattttacaaaattatctcttattaatga 3242657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 668 - 736
Target Start/End: Complemental strand, 30737951 - 30737883
Alignment:
Q  668 tcattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttaca 736  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  30737951 tcattttcacacatattaagaaatgtagttaattttatattggaaataaaaattataagtgattttaca 30737883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 681 - 759
Target Start/End: Original strand, 43248431 - 43248509
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacat 759  Q
    |||||||||||||||||| |||  |||| ||||| ||||||||||||||||||| ||| | ||| || |||||||||||    
T  43248431 tattaagaaatgtagttagtttcgtattaaaaagtgaaattatgagtgattttataaagttatcactcattaatgacat 43248509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 2048032 - 2048100
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || ||| |  ||||||||||||||||  |||||||||||    
T  2048032 tttcacacgtattaagaaatgtaattaatattgtatggggaagagaaattatgagttgttttacaaaat 2048100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 9527698 - 9527630
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | |  ||||||||||||||||  |||||||||||    
T  9527698 tttcacacgtattaagaaatgtaattaattttgtgtggggaagagaaattatgagttgttttacaaaat 9527630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 18449964 - 18450032
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  18449964 tttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 18450032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 22060894 - 22060826
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || |||||||||| | | ||||||| |||||||||  |||||||||||    
T  22060894 tttcacacgtattaagaaatataattaattttatgtgggaaagagatattatgagttgttttacaaaat 22060826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 38993732 - 38993664
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || ||| |  ||||||||||||||||  |||||||||||    
T  38993732 tttcacacgtattaagaaatgtaattaatattgtatggggaagagaaattatgagttgttttacaaaat 38993664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 40649298 - 40649230
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  40649298 tttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 40649230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 745
Target Start/End: Original strand, 22375053 - 22375126
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatct 745  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  ||||||||||| ||||    
T  22375053 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaattatct 22375126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 518710 - 518642
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  518710 tttcacacatattaagaaatgcaattaatattgtatggaaaagagatattatgagttgttttacaaaat 518642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 3871003 - 3870935
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || | | ||||||||| ||||||||| ||||||||||||    
T  3871003 tttcacacatattaagaaatgcaattaatattgtgtggaaaagagatattatgagttattttacaaaat 3870935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 4826538 - 4826470
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | | ||||||| ||||||||| ||||||||||||    
T  4826538 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttattttacaaaat 4826470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 5748492 - 5748560
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | | ||||||| |||||||||  |||||||||||    
T  5748492 tttcacacgtattaagaaatgtaattaatattgtgtgggaaagagatattatgagttgttttacaaaat 5748560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 6596713 - 6596645
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  6596713 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 6596645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 9110878 - 9110810
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  9110878 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 9110810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 11216839 - 11216771
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  11216839 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 11216771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 740
Target Start/End: Complemental strand, 14724042 - 14723978
Alignment:
Q  676 acacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||| ||||| || | | | |||||||||||||||||  |||||||||||    
T  14724042 acacgtattaagaaatgtaattaatattgtgtgggaaagagaaattatgagttgttttacaaaat 14723978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 16268235 - 16268167
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||| | ||||||| |||||||||||| ||||| | | ||||||| | ||||||||||||    
T  16268235 tttcacacgtatttaaaaatgtaattaattttatatagaaaataaatattatgaattattttacaaaat 16268167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 21134441 - 21134509
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || ||| ||||||||| ||||||| | ||||||||||||    
T  21134441 tttcacacttattaagaaatgcaattaatattgtatggaaaagagatattatgaattattttacaaaat 21134509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 21289098 - 21289030
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | || || |||||||||||||  |||||||||||    
T  21289098 tttcacacgtattaagaaatgtaattaatattgtgtggagaaaagaaattatgagttgttttacaaaat 21289030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 26849857 - 26849925
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  26849857 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 26849925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 29412077 - 29412009
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  29412077 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 29412009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 30549604 - 30549672
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  30549604 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 30549672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 34036345 - 34036277
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||||||||| || | | | ||||||| |||||||||  |||||||||||    
T  34036345 tttcacacatattaagaaatgtagttaatattgtgtgggaaagagatattatgagttgttttacaaaat 34036277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 34213363 - 34213295
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  34213363 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 34213295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 35669933 - 35669865
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| ||  || |  ||||||||||||||||  |||||||||||    
T  35669933 tttcacacgtattaagaaatgtaattaatattgcatggggaagagaaattatgagttgttttacaaaat 35669865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 36068351 - 36068283
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| |||| | | ||||||| |||||||||  |||||||||||    
T  36068351 tttcacacatattaagaaatgtaattaatattatgtgggaaagagatattatgagttgttttacaaaat 36068283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 37111036 - 37111104
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  37111036 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 37111104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 43521428 - 43521496
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  43521428 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 43521496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 739
Target Start/End: Original strand, 6026886 - 6026953
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaa 739  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  ||||||||||    
T  6026886 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaa 6026953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 756
Target Start/End: Original strand, 41635503 - 41635578
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    |||||| |||||||||||||||| ||||  |||||   |||  ||||||||||||||||| |||| ||||||||||    
T  41635503 tattaaaaaatgtagttaattttgtattagaaagatggattgcgagtgattttacaaaattatcttttattaatga 41635578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 683 - 737
Target Start/End: Complemental strand, 15242892 - 15242838
Alignment:
Q  683 ttaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaa 737  Q
    |||||||||||| |||||||| ||| ||||||||| |||||||||  ||||||||    
T  15242892 ttaagaaatgtaattaattttgtatggaaaagagatattatgagttgttttacaa 15242838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 4e-22; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 688 - 762
Target Start/End: Original strand, 38047335 - 38047409
Alignment:
Q  688 aaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  38047335 aaatgtagttaattttatattagaatgagaaattatgagtgattttacaaaattatctcttattaatgatatgag 38047409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 670 - 756
Target Start/End: Original strand, 3073407 - 3073493
Alignment:
Q  670 attttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    |||||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||| | |||||| ||||||| ||| |||||||||||    
T  3073407 attttcacacatattatgaaatatagttaattttgtattgcaaagagaaattataaatgatttcacaaaattatcccttattaatga 3073493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 657 - 762
Target Start/End: Original strand, 28339467 - 28339572
Alignment:
Q  657 aagttgtttattcattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    |||||||||  |||||||||||| | |||| |||||||||||||||| |||| |||| | ||||||||| | |||||| ||| | ||| |||||||||||    
T  28339467 aagttgttttgtcattttcacacatgttaacaaatgtagttaattttgtattcaaaacataaattatgattaattttataaatttatcccttattaatga 28339566  T
Q  757 catgag 762  Q
     |||||    
T  28339567 tatgag 28339572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 669 - 754
Target Start/End: Complemental strand, 34675457 - 34675373
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaat 754  Q
    ||||||||||  | |||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||  ||| |||||||||    
T  34675457 cattttcacatatgttaagaaatgtagttaattttatattgaaaaga-taataatgagtgatttaacaaaaatatcccttattaat 34675373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 8738220 - 8738152
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | ||||||| | ||||||||| ||||||||||||    
T  8738220 tttcacacgtattaagaaatgtaattaattttgtgtggaaaagaaatattatgagttattttacaaaat 8738152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 681 - 761
Target Start/End: Complemental strand, 27988499 - 27988419
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatga 761  Q
    ||||||||||| | | || |||| ||||||||||||||||| |||||||||||||||||  ||||||| ||||||| ||||    
T  27988499 tattaagaaatatggatacttttgtattgaaaagagaaattgtgagtgattttacaaaactatctctttttaatgatatga 27988419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 681 - 761
Target Start/End: Complemental strand, 28045801 - 28045721
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatga 761  Q
    ||||||||||| | | || |||| ||||||||||||||||| |||||||||||||||||  ||||||| ||||||| ||||    
T  28045801 tattaagaaatatggatacttttgtattgaaaagagaaattgtgagtgattttacaaaactatctctttttaatgatatga 28045721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 682 - 740
Target Start/End: Complemental strand, 11094324 - 11094266
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||| ||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||    
T  11094324 attaaaaaatgtaattaattttgtattgaaaagagaaattattagttattttacaaaat 11094266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 24333255 - 24333187
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  24333255 tttcacacatattaagaaatgtaattaatattgtatggaaaagagatattatgagttgttttacaaaat 24333187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 34865871 - 34865803
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| |||||||| | | | ||||||| ||||||||| ||||||||||||    
T  34865871 tttcacacctattaagaaatgtaattaattttgtgtgggaaagagatattatgagttattttacaaaat 34865803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 762
Target Start/End: Original strand, 10005500 - 10005596
Alignment:
Q  669 cattttcacacgtattaagaaatgtagtta---attttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    ||||||||||| ||||||||||| ||  ||   ||||| ||||  |||||||||||||||||||||||| ||||| | |||| |||||||| |||||    
T  10005500 cattttcacacatattaagaaatataactagtaattttgtattagaaagagaaattatgagtgattttataaaattacctctaattaatgatatgag 10005596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 733
Target Start/End: Complemental strand, 20166981 - 20166936
Alignment:
Q  688 aaatgtagttaattttatattgaaaagagaaattatgagtgatttt 733  Q
    ||||||| || ||||| |||||||||||||||||||||||||||||    
T  20166981 aaatgtaattcattttgtattgaaaagagaaattatgagtgatttt 20166936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 600085 - 600153
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | | ||||||| ||||||||| ||||||||||||    
T  600085 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttattttacaaaat 600153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 2099003 - 2099071
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | | ||||||| ||||||||| ||||||||||||    
T  2099003 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttattttacaaaat 2099071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 694 - 762
Target Start/End: Complemental strand, 3099003 - 3098935
Alignment:
Q  694 agttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    |||||||||| ||||| ||| |||||||||||| ||||||||||||| ||| ||  ||||||| |||||    
T  3099003 agttaattttgtattggaaatagaaattatgagggattttacaaaattatccctcgttaatgatatgag 3098935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 3562312 - 3562380
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||| |||||||||||||||| |||||||| ||| | ||||||| ||| |||||  |||||||||||    
T  3562312 tttcacgcgtattaagaaatgtaattaattttgtatgggaaagagacattttgagttgttttacaaaat 3562380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 4174782 - 4174714
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  |||||||||||||||  ||||||||||||    
T  4174782 tttcacacgtattaagaaatgtaattaatattgtgtagggaagagaaattatgagctattttacaaaat 4174714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 9471054 - 9470986
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  9471054 tttcacacatattaagaaatgcaattaatattgtatggaaaagagatattatgagttgttttacaaaat 9470986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 11181490 - 11181422
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  11181490 tttcacacatattaagaaatgcaattaatattgtatggaaaagagatattatgagttgttttacaaaat 11181422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 11714685 - 11714617
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | | ||||||| ||||||||| ||||||||||||    
T  11714685 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttattttacaaaat 11714617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 12000739 - 12000671
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || ||| | ||||||| |||||||||  |||||||||||    
T  12000739 tttcacacatattaagaaatgtaattaatattgtatgggaaagagatattatgagttgttttacaaaat 12000671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 740
Target Start/End: Complemental strand, 16422103 - 16422039
Alignment:
Q  676 acacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  16422103 acacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 16422039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 27919460 - 27919528
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  27919460 tttcacacttattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 27919528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 28074307 - 28074375
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  28074307 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 28074375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 28868968 - 28868900
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  28868968 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 28868900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 30597082 - 30597150
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | | ||||||| ||||||||| ||||||||||||    
T  30597082 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttattttacaaaat 30597150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 31692980 - 31692912
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| ||  || |  ||||||||||||||||  |||||||||||    
T  31692980 tttcacacgtattaagaaatgtaattaatattgcatggggaagagaaattatgagttgttttacaaaat 31692912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 37954204 - 37954272
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||| ||||||||||||||| ||||| |||| | |  |||||||||||| ||| ||||||||||||    
T  37954204 tttcacatgtattaagaaatgtaattaatattatgtggggaagagaaattataagttattttacaaaat 37954272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 39629089 - 39629021
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || | | ||||||||| ||||||||| ||||||||||||    
T  39629089 tttcacacatattaagaaatgcaattaatattgtgtggaaaagagatattatgagttattttacaaaat 39629021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 39638639 - 39638571
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || | | ||||||||| ||||||||| ||||||||||||    
T  39638639 tttcacacatattaagaaatgcaattaatattgtgtggaaaagagatattatgagttattttacaaaat 39638571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 41256235 - 41256303
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  41256235 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 41256303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 740
Target Start/End: Original strand, 14515547 - 14515606
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||| || |||||||||||| ||||||||| |  |||||| ||||||||||||    
T  14515547 tattaagaaatataattaattttatatggaaaagagataaaatgagttattttacaaaat 14515606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 747
Target Start/End: Original strand, 17524607 - 17524682
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctct 747  Q
    ||||| ||||||||||||||||| ||||| || | | |  ||||||||||||||||  ||||||||||| ||||||    
T  17524607 tttcatacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaattatctct 17524682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 740
Target Start/End: Complemental strand, 14762586 - 14762520
Alignment:
Q  674 tcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||| || |||||||| ||| ||||||| | |||||||||  ||||| |||||    
T  14762586 tcacacgtattaagaaatataattaattttgtatggaaaagaaatattatgagttgttttataaaat 14762520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 672 - 734
Target Start/End: Original strand, 32642434 - 32642496
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgatttta 734  Q
    ||||| ||||||||||||||||| ||||| || | | ||||||||| ||||||||| ||||||    
T  32642434 tttcatacgtattaagaaatgtaattaatattgtgtggaaaagagatattatgagttatttta 32642496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 682 - 760
Target Start/End: Complemental strand, 37432258 - 37432180
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatg 760  Q
    ||||| ||||||  |||||||| ||||  ||||||||||||| ||  |||||||||||| |||| || |||||||||||    
T  37432258 attaaaaaatgtgattaattttgtattagaaagagaaattataagcaattttacaaaattatctattgttaatgacatg 37432180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 753
Target Start/End: Complemental strand, 27116796 - 27116715
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaa 753  Q
    ||||||||  ||||||||||||| ||||| || ||| ||||||| ||||||| ||| |||| ||||||| |||  |||||||    
T  27116796 tttcacacaaattaagaaatgtaattaatgttgtatggaaaagataaattataagtaatttaacaaaattatcctttattaa 27116715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 745
Target Start/End: Original strand, 36466795 - 36466868
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatct 745  Q
    ||||||||||||||| |||| || ||||||||| || ||||| ||| |||||||||   |||||||||| ||||    
T  36466795 tttcacacgtattaaaaaatataattaattttacatggaaaaaagatattatgagttgatttacaaaattatct 36466868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 696 - 745
Target Start/End: Complemental strand, 38502063 - 38502014
Alignment:
Q  696 ttaattttatattgaaaagagaaattatgagtgattttacaaaatgatct 745  Q
    |||||||||||| | ||||||| ||||||||| |||||||||||| ||||    
T  38502063 ttaattttatatgggaaagagatattatgagttattttacaaaattatct 38502014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 740
Target Start/End: Original strand, 42827520 - 42827589
Alignment:
Q  671 ttttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||| |||||||||||| | ||||| || | | ||||||||| |||||||||  |||||||||||    
T  42827520 ttttcacacatattaagaaatgcaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 42827589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 2e-20; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 669 - 760
Target Start/End: Complemental strand, 35712265 - 35712174
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatg 760  Q
    ||||||||||  ||| ||||||||||||||||||| ||||| ||| ||||||||||| |||||| ||||||| ||| |||||||||||||||    
T  35712265 cattttcacatatatcaagaaatgtagttaattttgtattggaaatagaaattatgaatgatttgacaaaattatcccttattaatgacatg 35712174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 669 - 754
Target Start/End: Complemental strand, 16669403 - 16669315
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaa---ttatgagtgattttacaaaatgatctcttattaat 754  Q
    |||||||| || |||||| ||||||||||||||||||| |||||| | |||   |||||||||||||||||| || |||||||||||||    
T  16669403 cattttcatacatattaataaatgtagttaattttataatgaaaataaaaaaatttatgagtgattttacaagattatctcttattaat 16669315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 669 - 755
Target Start/End: Complemental strand, 22934899 - 22934813
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatg 755  Q
    ||||||||||| |||||| ||||||| || | ||| ||||| ||||||||  ||| |||||||||||||||| ||||||||||||||    
T  22934899 cattttcacacatattaaaaaatgtaatttactttgtattggaaagagaatctataagtgattttacaaaattatctcttattaatg 22934813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 37337261 - 37337193
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||| |||||||||  |||||||||||    
T  37337261 tttcacacgtattaagaaatgtaattaatattatgtggaaaagagatattatgagttgttttacaaaat 37337193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 669 - 741
Target Start/End: Original strand, 38388816 - 38388887
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatg 741  Q
    ||||||||||| |||||| |||| |||||||||||||||| |||| |||| |||||||| |||||||||||||    
T  38388816 cattttcacacatattaaaaaatatagttaattttatatttaaaa-agaatttatgagtaattttacaaaatg 38388887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 670 - 737
Target Start/End: Original strand, 1497258 - 1497325
Alignment:
Q  670 attttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaa 737  Q
    |||||||||| |||||| |||| ||||||||||| ||||| ||||||||||||| | |||||||||||    
T  1497258 attttcacacatattaaaaaatatagttaattttgtattggaaagagaaattataaatgattttacaa 1497325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 9249175 - 9249107
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| |||| | |  ||||||||||||||||  |||||||||||    
T  9249175 tttcacacgtattaagaaatgtaattaatattatgtggggaagagaaattatgagttgttttacaaaat 9249107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 756
Target Start/End: Complemental strand, 29726421 - 29726357
Alignment:
Q  692 gtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    |||||||||||| ||||||||| ||||||||||| |||||||| ||||| ||| || ||||||||    
T  29726421 gtagttaattttttattgaaaatagaaattatgaatgattttataaaattatcactaattaatga 29726357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 671 - 734
Target Start/End: Complemental strand, 16644789 - 16644726
Alignment:
Q  671 ttttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgatttta 734  Q
    ||||| ||| |||||| |||||||||||| ||| || |||||||| ||||||||||||||||||    
T  16644789 ttttcgcacatattaaaaaatgtagttaaatttgtactgaaaagaaaaattatgagtgatttta 16644726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 439879 - 439947
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| |||  | |  ||||||||||||||||  |||||||||||    
T  439879 tttcacacgtattaagaaatgtaattaatattacgtggggaagagaaattatgagttgttttacaaaat 439947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 2914670 - 2914602
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  2914670 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 2914602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 4745679 - 4745611
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||| ||||||||||||||| ||||||||||||  |||| ||| ||||| |||  |||||||||||    
T  4745679 tttcacatgtattaagaaatgtaattaattttatatgaaaaatagatattataagttgttttacaaaat 4745611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 5071030 - 5070962
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  5071030 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 5070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 5846841 - 5846909
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  5846841 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 5846909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 9577508 - 9577576
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  9577508 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 9577576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 14640035 - 14640103
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| ||   | || ||||||||||||||||  |||||||||||    
T  14640035 tttcacacgtattaagaaatgtaattaatattgcgtggagaagagaaattatgagttgttttacaaaat 14640103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 740
Target Start/End: Original strand, 15268312 - 15268376
Alignment:
Q  676 acacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||| |||||||| ||| | ||| ||| |||||||||  |||||||||||    
T  15268312 acacgtattaagaaatgtaattaattttgtatgggaaaaagatattatgagttgttttacaaaat 15268376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 740
Target Start/End: Complemental strand, 16626488 - 16626424
Alignment:
Q  676 acacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  16626488 acacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 16626424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 22510647 - 22510579
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  22510647 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 22510579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 22635572 - 22635640
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  22635572 tttcacacatattaagaaatgcaattaatattgtatggaaaagagatattatgagttgttttacaaaat 22635640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 27366268 - 27366336
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || | | ||||||||| ||||||||| ||||||||||||    
T  27366268 tttcacacatattaagaaatgcaattaatattgtgtggaaaagagatattatgagttattttacaaaat 27366336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 27807777 - 27807845
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  27807777 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 27807845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 29816451 - 29816383
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | ||| ||||||| |||||||||  |||||||||||    
T  29816451 tttcacacatattaagaaatgtaattaatattgtgttggaaagagatattatgagttgttttacaaaat 29816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 31196088 - 31196156
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||| ||||||| |||||||||| | | ||| ||| ||||||| | ||||||||||||    
T  31196088 tttcacacgtattaaaaaatgtaattaattttatgtgggaaatagatattatgaattattttacaaaat 31196156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 32292700 - 32292632
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || ||||| || | | || ||||||||||||||||  |||||||||||    
T  32292700 tttcacacgtattaagaaatataattaatattgtgtggagaagagaaattatgagttgttttacaaaat 32292632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 32706978 - 32706910
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  32706978 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 32706910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 34900035 - 34900103
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  34900035 tttcacacgtattaagaaatgtaattaatattctgtggggaagagaaattatgagttgttttacaaaat 34900103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 38394161 - 38394229
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  38394161 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 38394229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 39933057 - 39932989
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || ||||| || | | |  |||||||||||||||| ||||||||||||    
T  39933057 tttcacacgtattaagaaatataattaatattgtgtggggaagagaaattatgagttattttacaaaat 39932989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 40365326 - 40365394
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || ||| |  ||||||||||||||||  |||||||||||    
T  40365326 tttcacacatattaagaaatgtaattaatattgtatggggaagagaaattatgagttgttttacaaaat 40365394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 740
Target Start/End: Complemental strand, 11187492 - 11187433
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||| || ||||  ||||||||||||||||||  |||||| |||||||||    
T  11187492 tattaagaaatgtattttatttagtattgaaaagagaaattacaagtgatcttacaaaat 11187433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 688 - 762
Target Start/End: Original strand, 23263866 - 23263941
Alignment:
Q  688 aaatgtagttaattttatattgaaaagagaaa-ttatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    |||| ||||||||||| |||| |||||||||| |||  |||| ||||||||||| |||| ||| ||||||||||||    
T  23263866 aaatttagttaattttgtattaaaaagagaaatttacaagtgcttttacaaaattatcttttaataatgacatgag 23263941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 740
Target Start/End: Original strand, 29619249 - 29619320
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||  |||||||||||||| ||||| |||| | |||| |||| |||||||||  |||||||||||    
T  29619249 cattttcacatatattaagaaatgtaattaatattatgtggaaatgagatattatgagttgttttacaaaat 29619320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 672 - 762
Target Start/End: Original strand, 29000750 - 29000840
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    |||||||| |||||||||||||| ||||| || | | | ||||||| |||||||||  ||||||||||| |||| | || ||||| |||||    
T  29000750 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttgttttacaaaattatctttaataaatgatatgag 29000840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 668 - 762
Target Start/End: Original strand, 25149344 - 25149437
Alignment:
Q  668 tcattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    |||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||| |||| |||||||||| | ||  || ||||||||||||||    
T  25149344 tcattttcacacatattaagaa-tgtagtttattttatattggaaagagaaattaggagtaattttacaaatttatgcctaattaatgacatgag 25149437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 657 - 740
Target Start/End: Complemental strand, 34708257 - 34708174
Alignment:
Q  657 aagttgtttattcattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||| |  |||||||||| ||| |||||||||| |||||||| ||||||||||| ||||||| | |||||||| |||||    
T  34708257 aagttgtttttatattttcacacatataaagaaatgtaattaattttgtattgaaaagataaattataaatgattttataaaat 34708174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 30510789 - 30510857
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| |||||||| ||| | ||||||| |||||||||  |||||||||||    
T  30510789 tttcacacatattaagaaatgtaattaattttgtatgggaaagagatattatgagttgttttacaaaat 30510857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 738
Target Start/End: Complemental strand, 12058814 - 12058748
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaa 738  Q
    ||||||||||||||||||||||| |||||||| | ||| |||| || |||||||||  |||||||||    
T  12058814 tttcacacgtattaagaaatgtaattaattttgtgttggaaagtgatattatgagttgttttacaaa 12058748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 674 - 740
Target Start/End: Complemental strand, 30240451 - 30240385
Alignment:
Q  674 tcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  30240451 tcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 30240385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 725
Target Start/End: Original strand, 7499643 - 7499696
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatga 725  Q
    |||||||||||||||||||||||  ||||||| | ||||||||||| |||||||    
T  7499643 tttcacacgtattaagaaatgtaactaattttgtgttgaaaagagatattatga 7499696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 4131099 - 4131031
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || ||| | ||||| ||||||||| |  |||||||||||    
T  4131099 tttcacacgtattaagaaatgtaattaatattgtatgggaaagataaattatgaattgttttacaaaat 4131031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 680 - 740
Target Start/End: Original strand, 7885143 - 7885203
Alignment:
Q  680 gtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||| || ||||| ||| ||||||||| ||||| ||| ||||||||||||    
T  7885143 gtattaagaaatgtaattcattttgtatggaaaagagatattattagttattttacaaaat 7885203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 10629351 - 10629419
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  10629351 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 10629419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 11615600 - 11615532
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| |||| | | ||||||| |||||||||  |||||||||||    
T  11615600 tttcacacatattaagaaatgtaattaatattatgtgggaaagagatattatgagttgttttacaaaat 11615532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 16524552 - 16524620
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  16524552 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 16524620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 24178474 - 24178406
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  24178474 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 24178406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 708
Target Start/End: Complemental strand, 33821166 - 33821111
Alignment:
Q  653 ttacaagttgtttattcattttcacacgtattaagaaatgtagttaattttatatt 708  Q
    |||||||| |||||  ||||||||||| |||||| |||| ||||||||||||||||    
T  33821166 ttacaagtcgtttaaacattttcacacatattaaaaaatatagttaattttatatt 33821111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 740
Target Start/End: Original strand, 21599368 - 21599437
Alignment:
Q  670 attttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||| ||| ||||||| || ||||||||||||| ||||| ||||||||||| ||| |||| |||||||||    
T  21599368 attttaacatgtattaaaaattgtagttaattttgtattg-aaagagaaattgtgaatgatattacaaaat 21599437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 8e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 669 - 758
Target Start/End: Complemental strand, 46243995 - 46243906
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgaca 758  Q
    |||||||| || ||||||||||||||  ||||||| ||||||||| ||||||||||||| ||||||||| || |||  ||||||||||||    
T  46243995 cattttcatacatattaagaaatgtaaataattttgtattgaaaaaagaaattatgagtaattttacaagattatccattattaatgaca 46243906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 699 - 762
Target Start/End: Complemental strand, 36461340 - 36461277
Alignment:
Q  699 attttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatgag 762  Q
    |||||||||| |||||||||||||||||| | |||||||||| ||| |||||||||||||||||    
T  36461340 attttatattaaaaagagaaattatgagttactttacaaaattatcccttattaatgacatgag 36461277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 681 - 737
Target Start/End: Complemental strand, 3029637 - 3029581
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaa 737  Q
    |||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  3029637 tatttagaaatgtatttaattttgtattgaaaagagaaattatgtgtgattttacaa 3029581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 31582014 - 31582082
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | ||||||||| |||||||||  |||||||||||    
T  31582014 tttcacacgtattaagaaatgtaattaattttgtgtggaaaagagatattatgagttgttttacaaaat 31582082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 682 - 760
Target Start/End: Complemental strand, 34302666 - 34302590
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatg 760  Q
    |||||||||| ||||||||||| |||||  |||| |||||||||||| ||||||||||| |||||  ||||||||||||    
T  34302666 attaagaaatttagttaattttgtattgtgaagaaaaattatgagtggttttacaaaattatctc--attaatgacatg 34302590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 9417637 - 9417705
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  9417637 tttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 9417705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 17833160 - 17833092
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | |  ||||||||||||||||  |||||||||||    
T  17833160 tttcacacgtattaagaaatgtaattaattttgtgtggggaagagaaattatgagttgttttacaaaat 17833092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 32778053 - 32777985
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||||  |||||||||||    
T  32778053 tttcacacgtattaagaaatgtaattaattatgtatgggaaagagatattatgagttgttttacaaaat 32777985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 674 - 740
Target Start/End: Original strand, 19866313 - 19866379
Alignment:
Q  674 tcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  19866313 tcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 19866379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 733
Target Start/End: Complemental strand, 44388689 - 44388644
Alignment:
Q  688 aaatgtagttaattttatattgaaaagagaaattatgagtgatttt 733  Q
    ||||||| || ||||| |||||||||||||||||||||||||||||    
T  44388689 aaatgtaattcattttgtattgaaaagagaaattatgagtgatttt 44388644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 4089788 - 4089720
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||| ||||||||||||||||| |||||||| ||| ||||| ||| |||||||||  |||| ||||||    
T  4089788 tttcatacgtattaagaaatgtaattaattttgtatggaaaaaagatattatgagttgttttgcaaaat 4089720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 5113897 - 5113965
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||| ||||||    
T  5113897 tttcacacgtattaagaaatgtaattaattttttgtgggaaagagatattatgagttgttttgcaaaat 5113965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 12263897 - 12263829
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  12263897 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 12263829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 21746821 - 21746888
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||| ||||||| ||||||| |||||||| ||| ||||| ||| ||||||||| ||||||||||||    
T  21746821 tttcacatgtattaa-aaatgtaattaattttgtatggaaaaaagatattatgagttattttacaaaat 21746888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 22369751 - 22369683
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||| | ||||| || | | |||||||||  |||||||| ||||||||||||    
T  22369751 tttcacacgtattaagaaatgcaattaatattgtgtggaaaagagattttatgagttattttacaaaat 22369683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 25650992 - 25651060
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||| ||| ||||||||| ||||||||||||    
T  25650992 tttcacacatattaagaaatgtaattaatattgtgtagaaaaaagatattatgagttattttacaaaat 25651060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 27131352 - 27131420
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || |||||||| | | | ||||||| |||||||||  |||||||||||    
T  27131352 tttcacacgtattaagaaatataattaattttgtgtaggaaagagatattatgagttgttttacaaaat 27131420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 29669519 - 29669451
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  29669519 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 29669451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 31466295 - 31466227
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  31466295 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 31466227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 35497903 - 35497835
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | ||| ||||||| |||||||||  |||||||||||    
T  35497903 tttcacacatattaagaaatgtaattaatattgtgttggaaagagatattatgagttgttttacaaaat 35497835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 39430328 - 39430260
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  39430328 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 39430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 39938835 - 39938767
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  39938835 tttcacacatattaagaaatgcaattaatattgtatggaaaagagatattatgagttgttttacaaaat 39938767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 40353668 - 40353736
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  40353668 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 40353736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 40536819 - 40536887
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  40536819 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 40536887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 42941136 - 42941068
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| ||  || |  ||||||||||||||||  |||||||||||    
T  42941136 tttcacacgtattaagaaatgtaattaatattgcatggggaagagaaattatgagttgttttacaaaat 42941068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 740
Target Start/End: Complemental strand, 45042217 - 45042153
Alignment:
Q  676 acacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||| |||||||| | | | ||| ||| ||||||||| ||||||||||||    
T  45042217 acacgtattaagaaatgtaattaattttgtgtgggaaatagatattatgagttattttacaaaat 45042153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 672 - 726
Target Start/End: Original strand, 30643068 - 30643122
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgag 726  Q
    ||||||||  |||||| |||||||||||| || ||| ||||||||||||||||||    
T  30643068 tttcacacaaattaaggaatgtagttaatattgtatagaaaagagaaattatgag 30643122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 682 - 740
Target Start/End: Original strand, 40212291 - 40212348
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||| |||| ||||||||||||||| |||||||| |||||||||| |||||| |||||    
T  40212291 attaaaaaatttagttaattttatatagaaaagag-aattatgagttattttataaaat 40212348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 749
Target Start/End: Original strand, 4503663 - 4503740
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctctta 749  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||   |||||||||| ||| ||||    
T  4503663 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgatttacaaaattatccctta 4503740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 727
Target Start/End: Complemental strand, 31858432 - 31858387
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagt 727  Q
    ||||| ||||||||||||||||  || |||||||||||||||||||    
T  31858432 attaataaatgtagttaattttgaatagaaaagagaaattatgagt 31858387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 42122149 - 42122080
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaat-tttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| ||| | | ||||||||| ||||||||  ||||||||||||    
T  42122149 tttcacacatattaagaaatgtaattaatatttgtgtggaaaagagatattatgagctattttacaaaat 42122080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 8e-17; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 681 - 754
Target Start/End: Complemental strand, 24569500 - 24569427
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaat 754  Q
    ||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||| ||| |||| ||||    
T  24569500 tattaaggaatgtagttaattttgaattgaaaagagacattatgagtgattttacaaaattatcccttaataat 24569427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 681 - 737
Target Start/End: Original strand, 9482600 - 9482656
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaa 737  Q
    |||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  9482600 tatttagaaatgtatttaattttgtattgaaaagagaaattatgtgtgattttacaa 9482656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 41947598 - 41947666
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | ||| ||||||| |||||||||  |||||||||||    
T  41947598 tttcacacgtattaagaaatgtaattaattttgtgttggaaagagatattatgagttgttttacaaaat 41947666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 669 - 756
Target Start/End: Complemental strand, 47467674 - 47467587
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    ||||||||||  ||| ||||||||||||||||||| ||||||||| |||||||||||    ||||||||||| |||  ||||||||||    
T  47467674 cattttcacaaatatcaagaaatgtagttaattttgtattgaaaaaagaaattatgaaaatttttacaaaattatcatttattaatga 47467587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 753
Target Start/End: Original strand, 52157023 - 52157077
Alignment:
Q  699 attttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaa 753  Q
    ||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  52157023 attttgtattggaaagagaaattatgagtgattttacaaaattatcccttattaa 52157077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 737
Target Start/End: Complemental strand, 40532884 - 40532831
Alignment:
Q  684 taagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaa 737  Q
    |||||||||||||||||||||||||| ||||| ||||||  |||||||||||||    
T  40532884 taagaaatgtagttaattttatattgtaaagataaattagtagtgattttacaa 40532831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 388290 - 388222
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  388290 tttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 388222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 22128967 - 22128899
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || ||||| || ||| ||||||||||||||||| |  |||||||||||    
T  22128967 tttcacacgtattaagaaatataattaatattgtatggaaaagagaaattatgacttgttttacaaaat 22128899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 23138282 - 23138214
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | || ||||||||||||||||  |||||||||||    
T  23138282 tttcacacgtattaagaaatgtaattaatattgtgtggagaagagaaattatgagttgttttacaaaat 23138214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 23138464 - 23138396
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | || ||||||||||||||||  |||||||||||    
T  23138464 tttcacacgtattaagaaatgtaattaatattgtgtggagaagagaaattatgagttgttttacaaaat 23138396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 25367278 - 25367346
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| |||| | ||||||||| |||||||||  |||||||||||    
T  25367278 tttcacacatattaagaaatgtaattaatattatgtagaaaagagatattatgagttgttttacaaaat 25367346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 740
Target Start/End: Original strand, 31372403 - 31372467
Alignment:
Q  676 acacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||| ||||| |||||||| ||| ||||||||| |||||||||  |||||||||||    
T  31372403 acacgtattaagatatgtaattaattttgtatggaaaagagatattatgagttgttttacaaaat 31372467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 37788122 - 37788054
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || ||||| || | | | ||||||||||||||||| ||||||||||||    
T  37788122 tttcacacgtattaagaaatataattaatattgtgtgggaaagagaaattatgagttattttacaaaat 37788054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 42179494 - 42179562
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  42179494 tttcacacgtattaagaaatgtaattaatattgtgtagaaaagagatattatgagttgttttacaaaat 42179562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 43050412 - 43050344
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | | |||||||||||||||||  |||||||||||    
T  43050412 tttcacacgtattaagaaatgtaattaatattgtgtgggaaagagaaattatgagttgttttacaaaat 43050344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 671 - 714
Target Start/End: Original strand, 48418942 - 48418985
Alignment:
Q  671 ttttcacacgtattaagaaatgtagttaattttatattgaaaag 714  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  48418942 tttttacacgtattaagaaacgtagttaattttatattgaaaag 48418985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 681 - 751
Target Start/End: Original strand, 1167524 - 1167594
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttatt 751  Q
    |||||| |||||||||||||||||||||| ||||||| |||||  ||  ||||| ||||| ||||||||||    
T  1167524 tattaaaaaatgtagttaattttatattggaaagagagattatatgttgttttataaaattatctcttatt 1167594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 681 - 751
Target Start/End: Original strand, 1170006 - 1170076
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttatt 751  Q
    |||||| |||||||||||||||||||||| ||||||| |||||  ||  ||||| ||||| ||||||||||    
T  1170006 tattaaaaaatgtagttaattttatattggaaagagagattatatgttgttttataaaattatctcttatt 1170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 759
Target Start/End: Complemental strand, 52743111 - 52743069
Alignment:
Q  717 aaattatgagtgattttacaaaatgatctcttattaatgacat 759  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  52743111 aaattatgagtgattttacaaaatgatcatttattaatgacat 52743069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 753
Target Start/End: Complemental strand, 6629117 - 6629037
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaa 753  Q
    ||||||||||||||||||||||| ||||| || | | | ||||||| |||||||||  ||||||||||| ||| ||||||||    
T  6629117 tttcacacgtattaagaaatgtaattaatattgtgtgggaaagagatattatgagttgttttacaaaattatc-cttattaa 6629037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 745
Target Start/End: Complemental strand, 34498319 - 34498246
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatct 745  Q
    |||||||  |||||||||||||| ||||| |||||| | ||||||| |||||||||  ||||||||||| ||||    
T  34498319 tttcacatatattaagaaatgtaattaatattatatgggaaagagatattatgagttgttttacaaaattatct 34498246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 288591 - 288523
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  288591 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 288523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 2401471 - 2401403
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | | ||||||| |||||||||  |||||||||||    
T  2401471 tttcacacgtattaagaaatgtaattaatattgtgtgggaaagagatattatgagttgttttacaaaat 2401403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 13800577 - 13800509
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  13800577 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 13800509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 19878000 - 19877932
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || |||||||| | | | ||| ||| ||||||||| ||||||||||||    
T  19878000 tttcacacgtattaagaaatataattaattttgtgtgggaaatagatattatgagttattttacaaaat 19877932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 22101162 - 22101094
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  22101162 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 22101094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 740
Target Start/End: Original strand, 22496499 - 22496563
Alignment:
Q  676 acacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||| |||||||||| | | ||||| | |||||||||  |||||||||||    
T  22496499 acacgtattaagaaatgtaattaattttatgtgggaaagatatattatgagtcgttttacaaaat 22496563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 23237247 - 23237179
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||| | ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  23237247 tttcacacatattaagaaatgcaattaatattgtatggaaaagagatattatgagttgttttacaaaat 23237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 30649620 - 30649688
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  30649620 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 30649688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 33244803 - 33244871
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | | ||||||| |||||||||  |||||||||||    
T  33244803 tttcacacgtattaagaaatgtaattaatattgtgtgggaaagagatattatgagttgttttacaaaat 33244871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 38852671 - 38852739
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  38852671 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 38852739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 39418046 - 39417978
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  39418046 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 39417978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 42168524 - 42168456
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  42168524 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 42168456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 42507570 - 42507638
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  42507570 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 42507638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 43587912 - 43587844
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||||||||| || | | | ||||||| |||||||||  |||||||||||    
T  43587912 tttcacacatattaagaaatgtagttaatattgtttgggaaagagatattatgagttgttttacaaaat 43587844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 51625084 - 51625016
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  51625084 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 51625016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 54315300 - 54315232
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || |||||||| | | | ||||||| |||||||||  |||||||||||    
T  54315300 tttcacacgtattaagaaatataattaattttgtgtgggaaagagatattatgagttgttttacaaaat 54315232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 759
Target Start/End: Original strand, 1173248 - 1173326
Alignment:
Q  681 tattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacat 759  Q
    |||||| ||||||| |||||||||||||| |||  |||||||| |||  ||||||||| | |||||| |||||| ||||    
T  1173248 tattaaaaaatgtacttaattttatattggaaaacgaaattataagtagttttacaaatttatctctcattaataacat 1173326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 682 - 740
Target Start/End: Original strand, 34323265 - 34323323
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||| ||||||||||||   | |||||||| |||||||| ||||||||||||    
T  34323265 attaagaaatgcagttaattttattcaggaaagagaagttatgagttattttacaaaat 34323323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 740
Target Start/End: Original strand, 13252200 - 13252269
Alignment:
Q  671 ttttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||| |||||||||||||| ||||| || | | | ||||||| |||||||||  |||||||||||    
T  13252200 ttttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttgttttacaaaat 13252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 16833638 - 16833706
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattga-aaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||| ||||||| ||||| |||| |||| ||||||| |||||||||  |||||||||||    
T  16833638 tttcacacgtattaaaaaatgtaattaatattat-ttgagaaagagatattatgagttgttttacaaaat 16833706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 739
Target Start/End: Original strand, 42380659 - 42380716
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaa 739  Q
    ||||||||||||||||||| || |||||||||||  || |||||||  ||||||||||    
T  42380659 attaagaaatgtagttaatgttgtattgaaaagatgaactatgagttgttttacaaaa 42380716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 725
Target Start/End: Complemental strand, 43566241 - 43566188
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatga 725  Q
    ||||||||||||||||||||| | |||||||| | | ||||||||| |||||||    
T  43566241 tttcacacgtattaagaaatgcaattaattttgtgtggaaaagagatattatga 43566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 8e-17; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 669 - 760
Target Start/End: Original strand, 35739802 - 35739892
Alignment:
Q  669 cattttcacacgtattaagaaatgta-gttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatg 760  Q
    |||||||||||  ||||| ||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||| |||  ||||||||||||||    
T  35739802 cattttcacac--attaataaatgtaagttaattttgtattggaaagagaaattatgattgattttacaaaattatcctttattaatgacatg 35739892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 10085958 - 10085890
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | ||||||| ||||||||| ||||||||||||    
T  10085958 tttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatgagttattttacaaaat 10085890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 682 - 760
Target Start/End: Complemental strand, 32825699 - 32825621
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatgacatg 760  Q
    |||||||||||| | ||||||| ||||| ||||| ||||||||| |||||||| ||||| ||| ||||| |||||||||    
T  32825699 attaagaaatgttgataattttgtattggaaagaaaaattatgaatgattttataaaattatcccttatcaatgacatg 32825621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 2458735 - 2458667
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | |  ||||||||||||||||  |||||||||||    
T  2458735 tttcacacgtattaagaaatgtaattaattttgtgtggggaagagaaattatgagttgttttacaaaat 2458667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 8768483 - 8768551
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  |||||||||||||||| ||||||||||||    
T  8768483 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttattttacaaaat 8768551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 25792394 - 25792326
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || |||||||| | | ||||| ||| ||||||||| ||||||||||||    
T  25792394 tttcacacgtattaagaaatataattaattttgtgtggaaaaaagatattatgagttattttacaaaat 25792326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 52703616 - 52703548
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||| ||||||||||||| |||||||| | | ||||||||| |||||||||  |||||||||||    
T  52703616 tttcacacgcattaagaaatgtaattaattttgtgtggaaaagagatattatgagttgttttacaaaat 52703548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 740
Target Start/End: Complemental strand, 24584034 - 24583963
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||| |||||||||||||| ||||| || | | | ||||||| ||||||||| ||||||||||||    
T  24584034 cattttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttattttacaaaat 24583963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 740
Target Start/End: Complemental strand, 24589748 - 24589677
Alignment:
Q  669 cattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||| |||||||||||||| ||||| || | | | ||||||| ||||||||| ||||||||||||    
T  24589748 cattttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgagttattttacaaaat 24589677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 684 - 739
Target Start/End: Complemental strand, 31157889 - 31157834
Alignment:
Q  684 taagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaa 739  Q
    ||||||||||| ||||||||||||  ||||||||||||||||  ||||||||||||    
T  31157889 taagaaatgtaattaattttatatgaaaaagagaaattatgaaagattttacaaaa 31157834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 756
Target Start/End: Original strand, 34595979 - 34596072
Alignment:
Q  657 aagttgtttattcattttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaatgatctcttattaatga 756  Q
    ||||||||| |  |||||||||| |||||| |||||||||||||   ||||   ||||||||||||| |||||||||||||||| ||| |||||||||||    
T  34595979 aagttgtttttatattttcacacatattaa-aaatgtagttaat---atatg--aaagagaaattataagtgattttacaaaattatcccttattaatga 34596072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 725
Target Start/End: Complemental strand, 487705 - 487652
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatga 725  Q
    ||||||||||||||||||||||| |||||||||| | ||||| |||||| ||||    
T  487705 tttcacacgtattaagaaatgtaattaattttatgtggaaaaaagaaatcatga 487652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 1037493 - 1037561
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| | |||| ||||||||| |||||||||  ||||| |||||    
T  1037493 tttcacacatattaagaaatgtaattaatataatatggaaaagagatattatgagttgttttataaaat 1037561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 1044399 - 1044467
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| | |||| ||||||||| |||||||||  ||||| |||||    
T  1044399 tttcacacatattaagaaatgtaattaatataatatggaaaagagatattatgagttgttttataaaat 1044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 4750234 - 4750302
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||| | |||||||||||||| ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  4750234 tttcacgcatattaagaaatgtaattaatattgtatggaaaagagatattatgagttgttttacaaaat 4750302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 6540498 - 6540566
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  6540498 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 6540566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 7318611 - 7318679
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  7318611 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 7318679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 8462315 - 8462383
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| |||| | | ||||||| |||||||||  |||||||||||    
T  8462315 tttcacacatattaagaaatgtaattaatattatgtgggaaagagatattatgagttgttttacaaaat 8462383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 15824150 - 15824218
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  15824150 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 15824218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 16011163 - 16011095
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | | ||||||| |||||||||  |||||||||||    
T  16011163 tttcacacgtattaagaaatgtaattaatattgtgtaggaaagagatattatgagttgttttacaaaat 16011095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 23827566 - 23827498
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  23827566 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 23827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 29672549 - 29672481
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||  |||||||||||||| ||||| || ||| ||||||||| |||||||||  |||||||||||    
T  29672549 tttcacatatattaagaaatgtaattaatattgtatggaaaagagatattatgagttgttttacaaaat 29672481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 31181422 - 31181354
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| |||||||| | | | |||||||  ||||||||  |||||||||||    
T  31181422 tttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatgttatgagttgttttacaaaat 31181354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 31925101 - 31925169
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  31925101 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 31925169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 35379548 - 35379616
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  35379548 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 35379616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 39673532 - 39673600
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | | ||||| |||||||||||  |||||||||||    
T  39673532 tttcacacgtattaagaaatgtaattaatattgtgtgggaaagaaaaattatgagttgttttacaaaat 39673600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 42219621 - 42219689
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  42219621 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 42219689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 45269007 - 45269075
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  45269007 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 45269075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 49367273 - 49367341
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  49367273 tttcacacatattaagaaatgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 49367341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 50309740 - 50309808
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  50309740 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 50309808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 740
Target Start/End: Original strand, 51690923 - 51690954
Alignment:
Q  709 gaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||||||||||||    
T  51690923 gaaaagagaaattatgagtgattttacaaaat 51690954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 672 - 738
Target Start/End: Original strand, 3280895 - 3280961
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaa 738  Q
    |||||||||||||||||||| || |||||||| | |   ||||||| ||||||||| ||||||||||    
T  3280895 tttcacacgtattaagaaatataattaattttgtctgagaaagagatattatgagttattttacaaa 3280961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 682 - 740
Target Start/End: Complemental strand, 3533479 - 3533421
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||| ||||| || ||| ||||| ||||||||| ||| ||||||||||||    
T  3533479 attaagaaatgtaattaatattgtatggaaaaaagaaattataagtaattttacaaaat 3533421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 682 - 740
Target Start/End: Original strand, 6947789 - 6947847
Alignment:
Q  682 attaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||| ||||||| ||||| |||||| || ||||||| |||||||| ||||||||||||    
T  6947789 attaataaatgtaattaatgttatatggagaagagaatttatgagtaattttacaaaat 6947847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 672 - 722
Target Start/End: Original strand, 7038005 - 7038055
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaatta 722  Q
    ||||||||||||||||||||||| ||||| || ||| ||||||||| ||||    
T  7038005 tttcacacgtattaagaaatgtaattaatattgtatggaaaagagatatta 7038055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 740
Target Start/End: Complemental strand, 32472948 - 32472879
Alignment:
Q  671 ttttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||| || |||||||||| |||||||| |||   ||||||| ||| ||||| ||||||||||||    
T  32472948 ttttcacacgcataaagaaatgtaattaattttgtatgagaaagagatattttgagttattttacaaaat 32472879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 10325 - 10393
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || |||||||||||| ||||| ||| |||||||||  |||||||||||    
T  10325 tttcacacgtattaagaaatataattaattttatatagaaaatagatattatgagttgttttacaaaat 10393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 20653 - 20721
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||||| || |||||||||||| ||||| ||| |||||||||  |||||||||||    
T  20653 tttcacacgtattaagaaatataattaattttatatagaaaatagatattatgagttgttttacaaaat 20721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 42783 - 42715
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||| ||||||||||||||||| ||||||||||||  |||||||| |||||||||  |||||||||||    
T  42783 tttcaaacgtattaagaaatgtaattaattttatatgtaaaagagatattatgagttgttttacaaaat 42715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1515 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1515
Description:

Target: scaffold1515; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 1692 - 1624
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| |||| | ||||||||| |||||||||  |||||||||||    
T  1692 tttcacacatattaagaaatgtaattaatattatgtggaaaagagatattatgagttgttttacaaaat 1624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 691 - 737
Target Start/End: Original strand, 3086 - 3132
Alignment:
Q  691 tgtagttaattttatattgaaaagagaaattatgagtgattttacaa 737  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||    
T  3086 tgtatttaattttgtattgaaaagagaaattatgtgtgattttacaa 3132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 22912 - 22980
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  22912 tttcacacgtattaagaaatgtaattaatattgtgtgggtaagagaaattatgagttgttttacaaaat 22980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 99109 - 99041
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||| |||||||||||||| ||||| || | | ||||||||| |||||||||  |||||||||||    
T  99109 tttcacacatattaagaaatgtaattaatattgtgtggaaaagagatattatgagttgttttacaaaat 99041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Original strand, 11028 - 11096
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    |||||||||||||||||| |||| |||||||| | | | ||||||| |||||||||  |||||||||||    
T  11028 tttcacacgtattaagaattgtaattaattttgtgtgggaaagagatattatgagttgttttacaaaat 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 740
Target Start/End: Complemental strand, 1489 - 1421
Alignment:
Q  672 tttcacacgtattaagaaatgtagttaattttatattgaaaagagaaattatgagtgattttacaaaat 740  Q
    ||||||||||||||||||||||| ||||| || | | |  ||||||||||||||||  |||||||||||    
T  1489 tttcacacgtattaagaaatgtaattaatattgtgtggggaagagaaattatgagttgttttacaaaat 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University