View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19914_low_4 (Length: 436)
Name: NF19914_low_4
Description: NF19914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19914_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 45 - 421
Target Start/End: Original strand, 9380463 - 9380839
Alignment:
| Q |
45 |
acccaaaaaccaactactaaaataagttttgatatattgcttctttaatgcagttgatgcatgcatgctagtataataagttacttaaagttgaaaacat |
144 |
Q |
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| T |
9380463 |
acccaaaaaccaacttctaaaattagttttgatatattgcttctttaatgcagttgatgcatgcatgctagtataataagttacttaaagttgaaaacat |
9380562 |
T |
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| Q |
145 |
catatgtttatccaaaaggaaaatataccaatagacaaaattgacttttgaaaacatcatgaagtatataaacaaatttttgaatattcaaaacagaaca |
244 |
Q |
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| T |
9380563 |
cagatgtttatccaaaaggaaaatataccaatagacaaaattgacttttgaaaacatcatgaagtatataaacaaatttgggaatattcaaaacagaaca |
9380662 |
T |
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| Q |
245 |
aacaaaatttgtgtggagttgtatgaaaaattgactagtaagcaatttttgtgggaatattctgtagtagttgtagcagttctattcagttaaataggta |
344 |
Q |
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| T |
9380663 |
aacaaaatttgtgtggatttgtatgaaaaattgactagtaagcaatttttgtgggaatattctgtagtagttgtagcagttctattcagttaaataggta |
9380762 |
T |
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| Q |
345 |
aaacacataattcatttaaattaaaattaaagttacaaaattgatattgtttattattaactcatttggattgatct |
421 |
Q |
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||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| |
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| T |
9380763 |
aaatacataattcatttaaattaaaactaaagttacaaaattaatattgtttattattaactcatttagattgatct |
9380839 |
T |
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