View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19914_low_7 (Length: 350)

Name: NF19914_low_7
Description: NF19914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19914_low_7
NF19914_low_7
[»] chr6 (7 HSPs)
chr6 (1-226)||(2886201-2886425)
chr6 (261-333)||(2886092-2886164)
chr6 (1-100)||(2862352-2862449)
chr6 (1-100)||(2881655-2881752)
chr6 (272-333)||(2866893-2866954)
chr6 (21-100)||(16835043-16835121)
chr6 (21-100)||(12797657-12797735)
[»] scaffold0070 (2 HSPs)
scaffold0070 (1-100)||(59594-59693)
scaffold0070 (1-100)||(63796-63895)
[»] chr5 (6 HSPs)
chr5 (1-72)||(41997831-41997902)
chr5 (1-74)||(36941097-36941170)
chr5 (1-72)||(557884-557955)
chr5 (1-72)||(36949874-36949946)
chr5 (21-100)||(36424774-36424852)
chr5 (21-100)||(39519521-39519599)
[»] chr8 (6 HSPs)
chr8 (1-74)||(4241913-4241986)
chr8 (1-100)||(8330186-8330285)
chr8 (21-100)||(21959591-21959670)
chr8 (21-95)||(7002780-7002852)
chr8 (23-100)||(17021405-17021481)
chr8 (23-100)||(17551842-17551918)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-100)||(149769-149868)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-95)||(48771-48865)
[»] chr3 (4 HSPs)
chr3 (1-74)||(3673754-3673827)
chr3 (9-74)||(8884367-8884432)
chr3 (21-100)||(18468348-18468426)
chr3 (21-100)||(23665003-23665081)
[»] chr4 (5 HSPs)
chr4 (1-95)||(7899767-7899861)
chr4 (21-100)||(37263445-37263523)
chr4 (21-95)||(13060603-13060676)
chr4 (21-100)||(29349089-29349167)
chr4 (14-100)||(19103102-19103187)
[»] chr7 (3 HSPs)
chr7 (21-100)||(12802418-12802496)
chr7 (21-100)||(10391969-10392047)
chr7 (21-69)||(15975008-15975056)
[»] chr2 (4 HSPs)
chr2 (21-100)||(9184299-9184377)
chr2 (21-100)||(30652050-30652128)
chr2 (21-100)||(44630367-44630445)
chr2 (21-100)||(25496266-25496344)
[»] chr1 (2 HSPs)
chr1 (21-100)||(25844892-25844970)
chr1 (21-100)||(10136461-10136539)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-95)||(51725-51819)
[»] scaffold0015 (1 HSPs)
scaffold0015 (21-100)||(213178-213257)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-100)||(7622-7723)


Alignment Details
Target: chr6 (Bit Score: 135; Significance: 3e-70; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 2886425 - 2886201
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2886425 tcaattttcacacatgtttcaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 2886326  T
Q  101 atgtacgccgttaaattatagtactaattaaattc-nnnnnnnnnctggtggaattaaatagannnnnnnnnnnngacaagatgtggaattaaatagata 199  Q
    |||||||||||||||||||||||||||||||||||           ||||||||| ||| |||            |||||||||||||||||||||||||    
T  2886325 atgtacgccgttaaattatagtactaattaaattcttttttttttttggtggaataaaagaga--ttttttttttgacaagatgtggaattaaatagata 2886228  T
Q  200 tatttttctaattgagcaaataaaatg 226  Q
    |||||||||||||||||||||||||||    
T  2886227 tatttttctaattgagcaaataaaatg 2886201  T

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Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 2886164 - 2886092
Alignment:
Q  261 aatctggcctatagttttcaatttcagcacgcctacaaaatcaacaaatcgtatgtctccaagataacttggt 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2886164 aatctggcctatagttttcaatttcagcacgcctacaaaatcaacaaattgtatgtctccaagataacttggt 2886092  T

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Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2862449 - 2862352
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||  |||||||| ||||||| ||||||||| | |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  2862449 tcaatttttacacatgttccaacaatcc-ccacttggattttaaaa-tagtttcagaaataacgtcaaagaagtttttataagattgctaataaacaaag 2862352  T

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Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2881752 - 2881655
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||  |||||||| ||||||| ||||||||| | |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  2881752 tcaatttttacacatgttccaacaatcc-ccacttggattttaaaa-tagtttcagaaataacgtcaaagatgtttttataagattgctaataaacaaag 2881655  T

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Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 2866954 - 2866893
Alignment:
Q  272 tagttttcaatttcagcacgcctacaaaatcaacaaatcgtatgtctccaagataacttggt 333  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  2866954 tagtttccaatttcaacacgcccacaaaatcaacaaatcgtatgtctcctagataacttggt 2866893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 16835121 - 16835043
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  16835121 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 16835043  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 12797735 - 12797657
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||| ||| |||||| |||| | ||||||||||||| |||||| ||| |||||| ||||||| ||||    
T  12797735 aacaatcccccacttgactttaaaaaatagtttaaaaaataacgtcaaa-acgtttctattagattgctaataaacaaag 12797657  T

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Target: scaffold0070 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 59594 - 59693
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    ||||||| |||| |||||  |||||||| |||||||||||| ||||||| ||| || |||||||||||||||||||  ||||| ||| ||||||||||||    
T  59594 tcaatttccacatatgttccaacaatcccccacttgaatttaaaaaatgatttcagtaataacgtcaaagacgtttccataaggttgctaataaagaaag 59693  T

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Target: scaffold0070; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 63796 - 63895
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    ||||||| |||| |||||  |||||||| |||||||||||| ||||||| ||| || |||||||||||||||||||  ||||| ||| ||||||||||||    
T  63796 tcaatttccacatatgttccaacaatcccccacttgaatttaaaaaatgatttcagtaataacgtcaaagacgtttccataaggttgctaataaagaaag 63895  T

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Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41997831 - 41997902
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagac 72  Q
    ||||||||||||||||||  |||||||| |||||||||||| ||||||||||| | ||||||||||||||||    
T  41997831 tcaattttcacacatgttccaacaatcccccacttgaatttaaaaaatggtttcaaaaataacgtcaaagac 41997902  T

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Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36941170 - 36941097
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgt 74  Q
    ||||||| ||||||||||  |||||||| |||||||||||| ||||||||||| | ||||||||||||||||||    
T  36941170 tcaatttccacacatgttccaacaatcccccacttgaatttaaaaaatggtttcaaaaataacgtcaaagacgt 36941097  T

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Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 557884 - 557955
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagac 72  Q
    ||||||| ||||||||||  |||||||| |||||||||||| ||||||||||| | ||||||||||||||||    
T  557884 tcaatttccacacatgttccaacaatcccccacttgaatttaaaaaatggtttcaaaaataacgtcaaagac 557955  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 36949874 - 36949946
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttt-tagaaataacgtcaaagac 72  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||||| |||  ||||||||||| ||||||    
T  36949874 tcaattttcacacatgtttcaacaatcccccacttgaatttaaaaaatgatttcgagaaataacgtaaaagac 36949946  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 36424774 - 36424852
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||| | |||||||||||||||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  36424774 aacaattccccacttgaattttaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 36424852  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 39519521 - 39519599
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| | |||| |||||| ||| ||||||| ||||    
T  39519521 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-atgtttctataaggttgctaataaacaaag 39519599  T

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Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4241986 - 4241913
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgt 74  Q
    ||||||| ||||||||||  |||||||| |||||||||||| ||||||||||| | ||||||||||||||||||    
T  4241986 tcaatttccacacatgttccaacaatcccccacttgaatttaaaaaatggtttcaaaaataacgtcaaagacgt 4241913  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8330285 - 8330186
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    ||||||| |||| |||||  |||||||  |||||||||||| ||||||| ||| |  |||||||||||||||||||  ||||| ||| ||||||| ||||    
T  8330285 tcaatttccacatatgttccaacaatctcccacttgaatttaaaaaatgatttcaacaataacgtcaaagacgtttccataaggttgctaataaacaaag 8330186  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 21959591 - 21959670
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| ||| |||||||| ||| ||| ||| || |||||||||||||||||||  ||||| ||| ||||||| ||||    
T  21959591 aacaatcctccaattgaatttaaaatatgatttcagtaataacgtcaaagacgtttccataaggttgctaataaacaaag 21959670  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 7002780 - 7002852
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaa 95  Q
    |||||||| ||||||||||||||||||| |||| | |||||| || ||| |||||| |||||| |||||||||||    
T  7002780 aacaatcc-ccacttgaattttaaaaatagtttcataaataatgtgaaa-acgtttctataaggttgataataaa 7002852  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 17021405 - 17021481
Alignment:
Q  23 caatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||| |||||||||||  ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  17021405 caatcccccacttgaattaaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 17021481  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 17551842 - 17551918
Alignment:
Q  23 caatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||| |||||||||||  ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  17551842 caatcccccacttgaattaaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 17551918  T

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Target: scaffold0017 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 149769 - 149868
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    ||||||| |||| |||||  |||||||| |||||||||||| ||||||| ||| || |||||||||||||||||||  ||||| ||| ||||||| ||||    
T  149769 tcaatttccacatatgttccaacaatcccccacttgaatttaaaaaatgatttcagtaataacgtcaaagacgtttccataaggttgctaataaacaaag 149868  T

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Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 48865 - 48771
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaa 95  Q
    ||||||| |||| |||||  |||||||| |||||||||||| ||||||| ||| || |||||||||||||||||||  ||||| ||| |||||||    
T  48865 tcaatttccacatatgttccaacaatcccccacttgaatttaaaaaatgatttcagtaataacgtcaaagacgtttccataaggttgctaataaa 48771  T

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Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3673754 - 3673827
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgt 74  Q
    ||||||| ||||||||||  |||||||  |||||||||||| ||||||||||| | ||||||||||||||||||    
T  3673754 tcaatttccacacatgttccaacaatcacccacttgaatttaaaaaatggtttcaaaaataacgtcaaagacgt 3673827  T

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Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 8884367 - 8884432
Alignment:
Q  9 cacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgt 74  Q
    ||||||||||  |||||||| |||||||||||| ||||||||||| | ||||||||||||||||||    
T  8884367 cacacatgttccaacaatcccccacttgaatttaaaaaatggtttcaaaaataacgtcaaagacgt 8884432  T

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Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 18468348 - 18468426
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  18468348 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 18468426  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 23665081 - 23665003
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  23665081 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 23665003  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7899861 - 7899767
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaa 95  Q
    ||||||| |||| |||||  |||||||| |||||||||||| ||||||| ||| || ||||| |||||||||||||  ||||| ||| |||||||    
T  7899861 tcaatttccacatatgttccaacaatcccccacttgaatttaaaaaatgatttcagtaataatgtcaaagacgtttcaataaggttgctaataaa 7899767  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 37263523 - 37263445
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  37263523 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 37263445  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 13060603 - 13060676
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaa 95  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| |||||||    
T  13060603 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaa 13060676  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 29349167 - 29349089
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| | |||| |||||| ||| ||||||| ||||    
T  29349167 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-atgtttctataaggttgctaataaacaaag 29349089  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 19103102 - 19103187
Alignment:
Q  14 atgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||| |||||||| ||| |||||||| ||||| ||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  19103102 atgtttcaacaatcccccatttgaatttaaaaaaaggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 19103187  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 12802418 - 12802496
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  12802418 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 12802496  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 10392047 - 10391969
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    ||||||||  ||||| ||||| ||||||||||| |  |||||||||||| |||||| |||||||||| ||||||| ||||    
T  10392047 aacaatccctcactttaatttaaaaaatggtttcaataataacgtcaaa-acgtttatataagattgctaataaacaaag 10391969  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 15975008 - 15975056
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaa 69  Q
    |||||||| |||||||| |||  |||||||||| |||||||||||||||    
T  15975008 aacaatcctccacttgagtttacaaaatggtttgagaaataacgtcaaa 15975056  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 9184377 - 9184299
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  9184377 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 9184299  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 30652050 - 30652128
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  30652050 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 30652128  T

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Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 44630445 - 44630367
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  44630445 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 44630367  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 25496344 - 25496266
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| || ||| |||||| ||| ||||||| ||||    
T  25496344 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acttttctataaggttgctaataaacaaag 25496266  T

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Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 25844892 - 25844970
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  25844892 aacaatcccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 25844970  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 10136461 - 10136539
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||| | |||||||||||| ||||||||||| |  |||||||||||| |||||| |||||| ||| ||||||| ||||    
T  10136461 aacaattccccacttgaatttaaaaaatggtttcaataataacgtcaaa-acgtttctataaggttgctaataaacaaag 10136539  T

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Target: scaffold0060 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 51819 - 51725
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaa 95  Q
    |||||||||||| |||||  |||||||  | |||| ||||| ||||||| ||| || |||||||||||||||||||  ||||| ||| |||||||    
T  51819 tcaattttcacatatgttccaacaatcacctacttaaatttaaaaaatgatttcagtaataacgtcaaagacgtttccataaggttgctaataaa 51725  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 213257 - 213178
Alignment:
Q  21 aacaatccaccacttgaattttaaaaatggttttagaaataacgtcaaagacgtttttataagattgataataaagaaag 100  Q
    |||||||| ||| |||||||| ||| ||| ||| || |||||||||||||||||||  ||||| ||| ||||||| ||||    
T  213257 aacaatcctccaattgaatttaaaatatgatttcagtaataacgtcaaagacgtttccataaggttgctaataaacaaag 213178  T

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Target: scaffold0628 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7622 - 7723
Alignment:
Q  1 tcaattttcacacatgttttaacaatccaccacttgaattttaaa--aatggttttagaaataacgtcaaagacgtttttataagattgataataaagaa 98  Q
    ||||||| ||||||||||  |||||||| |||| ||||||| |||  |||||||| |||||||||||| ||||  ||| || ||| ||| ||||||| ||    
T  7622 tcaatttccacacatgttccaacaatcccccacatgaatttaaaataaatggtttcagaaataacgtccaagagatttctaaaaggttgctaataaacaa 7721  T
Q  99 ag 100  Q
    ||    
T  7722 ag 7723  T

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