View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19915_low_56 (Length: 252)

Name: NF19915_low_56
Description: NF19915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19915_low_56
NF19915_low_56
[»] chr3 (42 HSPs)
chr3 (8-252)||(8685526-8685770)
chr3 (16-252)||(13069935-13070173)
chr3 (8-247)||(20224911-20225152)
chr3 (13-252)||(7908686-7908927)
chr3 (8-252)||(17023415-17023647)
chr3 (14-252)||(17774957-17775186)
chr3 (14-252)||(19076258-19076487)
chr3 (85-252)||(22039007-22039175)
chr3 (8-252)||(42244229-42244475)
chr3 (8-252)||(13418550-13418798)
chr3 (8-252)||(11577431-11577674)
chr3 (149-252)||(11869661-11869764)
chr3 (85-246)||(17209753-17209915)
chr3 (159-250)||(41545599-41545690)
chr3 (8-245)||(10850399-10850638)
chr3 (159-252)||(8532056-8532149)
chr3 (164-252)||(27992546-27992635)
chr3 (85-252)||(17041883-17042051)
chr3 (167-252)||(17577036-17577122)
chr3 (85-245)||(17050903-17051064)
chr3 (8-192)||(6237082-6237268)
chr3 (180-249)||(12697319-12697388)
chr3 (8-98)||(40846793-40846884)
chr3 (8-118)||(1993748-1993859)
chr3 (8-118)||(1998907-1999018)
chr3 (159-252)||(11827243-11827336)
chr3 (8-116)||(27992170-27992278)
chr3 (8-98)||(11827093-11827184)
chr3 (8-97)||(9762307-9762396)
chr3 (8-97)||(9774762-9774851)
chr3 (8-252)||(14347762-14348006)
chr3 (159-245)||(27407386-27407472)
chr3 (85-252)||(13605204-13605370)
chr3 (8-98)||(8532208-8532299)
chr3 (177-252)||(11399043-11399118)
chr3 (177-252)||(25055181-25055256)
chr3 (18-94)||(27407534-27407611)
chr3 (165-252)||(19566834-19566922)
chr3 (79-111)||(11869592-11869624)
chr3 (177-212)||(14826731-14826767)
chr3 (165-252)||(17480633-17480721)
chr3 (165-252)||(36076358-36076446)
[»] chr1 (41 HSPs)
chr1 (23-252)||(16384650-16384880)
chr1 (8-252)||(16148127-16148374)
chr1 (8-252)||(12059458-12059705)
chr1 (55-252)||(13799165-13799364)
chr1 (8-252)||(26194398-26194637)
chr1 (8-252)||(23299053-23299296)
chr1 (8-251)||(20860375-20860616)
chr1 (8-252)||(20412415-20412659)
chr1 (159-247)||(25404911-25404999)
chr1 (159-252)||(20497720-20497814)
chr1 (8-252)||(22411271-22411517)
chr1 (85-227)||(28763632-28763775)
chr1 (8-193)||(16354306-16354493)
chr1 (165-252)||(15421261-15421349)
chr1 (177-252)||(2130111-2130185)
chr1 (8-100)||(20448722-20448815)
chr1 (8-100)||(20534488-20534581)
chr1 (177-252)||(16527503-16527578)
chr1 (153-247)||(52169159-52169254)
chr1 (8-93)||(30818865-30818951)
chr1 (13-100)||(20497871-20497959)
chr1 (177-252)||(24680306-24680381)
chr1 (85-252)||(25727112-25727279)
chr1 (85-252)||(25735520-25735687)
chr1 (89-252)||(28208047-28208210)
chr1 (8-77)||(21240400-21240470)
chr1 (191-251)||(21924824-21924884)
chr1 (165-251)||(15346686-15346773)
chr1 (20-98)||(20898345-20898424)
chr1 (47-98)||(25404801-25404852)
chr1 (217-252)||(30818957-30818992)
chr1 (145-252)||(52755168-52755274)
chr1 (28-97)||(52755051-52755121)
chr1 (165-252)||(16431709-16431797)
chr1 (165-252)||(46143381-46143469)
chr1 (177-252)||(19874988-19875063)
chr1 (159-192)||(20448632-20448665)
chr1 (159-192)||(20534398-20534431)
chr1 (165-252)||(17716910-17716997)
chr1 (165-252)||(19364793-19364881)
chr1 (165-252)||(49379484-49379572)
[»] chr7 (51 HSPs)
chr7 (8-252)||(4541330-4541575)
chr7 (8-252)||(4982829-4983073)
chr7 (8-252)||(4256294-4256541)
chr7 (13-252)||(4465471-4465710)
chr7 (13-252)||(17911748-17911987)
chr7 (14-252)||(679182-679419)
chr7 (8-252)||(21005205-21005450)
chr7 (145-250)||(30063780-30063884)
chr7 (145-252)||(38877568-38877675)
chr7 (8-211)||(11997018-11997223)
chr7 (13-252)||(15523191-15523429)
chr7 (184-252)||(17206252-17206320)
chr7 (159-252)||(11483687-11483780)
chr7 (90-252)||(6257287-6257450)
chr7 (8-252)||(39388897-39389143)
chr7 (85-252)||(3376273-3376440)
chr7 (85-252)||(33609887-33610050)
chr7 (13-252)||(48713610-48713850)
chr7 (177-252)||(4316833-4316908)
chr7 (186-250)||(4460621-4460685)
chr7 (184-252)||(6712301-6712369)
chr7 (149-252)||(8787108-8787212)
chr7 (8-201)||(8836781-8836974)
chr7 (85-252)||(8780205-8780373)
chr7 (159-243)||(1462719-1462803)
chr7 (177-252)||(25034168-25034243)
chr7 (85-252)||(39271320-39271487)
chr7 (159-252)||(1614135-1614228)
chr7 (85-252)||(9562098-9562265)
chr7 (85-247)||(9193774-9193937)
chr7 (13-87)||(12348299-12348374)
chr7 (159-252)||(16897094-16897188)
chr7 (159-224)||(46274288-46274353)
chr7 (85-178)||(19515121-19515210)
chr7 (8-98)||(4460476-4460567)
chr7 (8-98)||(30063643-30063734)
chr7 (8-98)||(46274412-46274503)
chr7 (8-77)||(1614252-1614322)
chr7 (155-252)||(4090863-4090961)
chr7 (177-235)||(14925695-14925753)
chr7 (177-235)||(15349161-15349219)
chr7 (8-104)||(38877715-38877811)
chr7 (184-252)||(1864477-1864545)
chr7 (8-98)||(11483537-11483628)
chr7 (13-98)||(16896949-16897035)
chr7 (165-252)||(8521998-8522085)
chr7 (165-247)||(17946880-17946963)
chr7 (57-98)||(1462862-1462903)
chr7 (47-104)||(14925825-14925881)
chr7 (47-104)||(15349291-15349347)
chr7 (141-252)||(16487533-16487644)
[»] chr2 (36 HSPs)
chr2 (8-252)||(19012691-19012938)
chr2 (8-252)||(20852289-20852533)
chr2 (28-250)||(19124028-19124253)
chr2 (8-252)||(24321959-24322203)
chr2 (14-252)||(24371128-24371365)
chr2 (112-247)||(15584004-15584140)
chr2 (13-252)||(23256705-23256942)
chr2 (85-252)||(24366062-24366230)
chr2 (159-252)||(24609901-24609994)
chr2 (85-252)||(23698566-23698734)
chr2 (85-247)||(25858346-25858509)
chr2 (180-252)||(13004649-13004721)
chr2 (85-252)||(41653370-41653538)
chr2 (8-252)||(30948937-30949182)
chr2 (177-252)||(31590365-31590439)
chr2 (177-252)||(36129950-36130025)
chr2 (159-252)||(21344315-21344408)
chr2 (177-252)||(29951787-29951866)
chr2 (8-146)||(16440041-16440181)
chr2 (85-252)||(22328654-22328822)
chr2 (85-252)||(23340728-23340895)
chr2 (28-98)||(23704593-23704664)
chr2 (8-98)||(24177376-24177467)
chr2 (177-252)||(25592972-25593047)
chr2 (159-252)||(21243-21336)
chr2 (196-252)||(22578195-22578250)
chr2 (145-252)||(29577166-29577272)
chr2 (45-98)||(29577067-29577120)
chr2 (8-98)||(21087-21179)
chr2 (177-227)||(539384-539434)
chr2 (8-160)||(23613824-23613977)
chr2 (159-252)||(23704441-23704534)
chr2 (165-252)||(28496533-28496621)
chr2 (8-98)||(24609751-24609842)
chr2 (177-230)||(24018448-24018502)
chr2 (165-252)||(27745227-27745314)
[»] chr5 (30 HSPs)
chr5 (13-252)||(22170947-22171189)
chr5 (8-252)||(12410687-12410934)
chr5 (8-252)||(16677239-16677486)
chr5 (85-252)||(20738516-20738684)
chr5 (8-252)||(24166425-24166669)
chr5 (8-252)||(23029250-23029493)
chr5 (8-252)||(24165415-24165661)
chr5 (132-252)||(2953339-2953460)
chr5 (145-252)||(23114420-23114528)
chr5 (100-247)||(31757889-31758037)
chr5 (129-227)||(20103729-20103828)
chr5 (8-139)||(2953062-2953195)
chr5 (180-252)||(18091769-18091841)
chr5 (85-252)||(20169232-20169399)
chr5 (8-98)||(20724530-20724621)
chr5 (177-252)||(19222075-19222150)
chr5 (145-252)||(22948733-22948839)
chr5 (13-86)||(31414810-31414884)
chr5 (145-252)||(20724667-20724773)
chr5 (45-98)||(22948885-22948938)
chr5 (28-98)||(17408434-17408505)
chr5 (145-252)||(17408551-17408657)
chr5 (8-104)||(23114568-23114664)
chr5 (141-252)||(21382440-21382551)
chr5 (46-98)||(22942675-22942727)
chr5 (165-252)||(23435486-23435574)
chr5 (165-252)||(23446853-23446941)
chr5 (159-252)||(22942523-22942616)
chr5 (180-252)||(20915810-20915882)
chr5 (184-252)||(34222978-34223046)
[»] chr4 (39 HSPs)
chr4 (8-252)||(5675630-5675877)
chr4 (8-252)||(38652320-38652565)
chr4 (8-227)||(9192423-9192645)
chr4 (145-250)||(5513458-5513563)
chr4 (8-251)||(12345638-12345880)
chr4 (8-252)||(12807862-12808108)
chr4 (145-252)||(23793429-23793536)
chr4 (159-252)||(11922275-11922368)
chr4 (13-225)||(17168977-17169188)
chr4 (13-225)||(17174537-17174748)
chr4 (8-192)||(25190407-25190592)
chr4 (85-204)||(3771949-3772069)
chr4 (28-250)||(33330711-33330921)
chr4 (60-252)||(9717496-9717687)
chr4 (8-132)||(8561999-8562125)
chr4 (180-252)||(13510674-13510746)
chr4 (177-250)||(18749702-18749775)
chr4 (165-252)||(55267743-55267831)
chr4 (191-252)||(13883333-13883394)
chr4 (28-98)||(11902327-11902398)
chr4 (161-252)||(11902459-11902550)
chr4 (193-252)||(12347534-12347593)
chr4 (145-252)||(16953729-16953835)
chr4 (159-252)||(10731301-10731394)
chr4 (159-252)||(10945070-10945163)
chr4 (177-251)||(24493106-24493182)
chr4 (181-249)||(4742978-4743046)
chr4 (145-252)||(9857370-9857476)
chr4 (149-246)||(39558-39656)
chr4 (8-98)||(11922125-11922216)
chr4 (85-227)||(20058925-20059067)
chr4 (177-252)||(22809346-22809421)
chr4 (85-227)||(31594075-31594216)
chr4 (177-245)||(7197391-7197459)
chr4 (28-98)||(9857522-9857593)
chr4 (8-82)||(10731468-10731543)
chr4 (8-82)||(10945237-10945312)
chr4 (165-227)||(43701411-43701474)
chr4 (165-252)||(39043328-39043416)
[»] chr8 (29 HSPs)
chr8 (8-252)||(26854232-26854479)
chr8 (55-252)||(14161862-14162061)
chr8 (14-252)||(19791914-19792155)
chr8 (8-247)||(21319591-21319832)
chr8 (8-252)||(24221233-24221476)
chr8 (8-252)||(22904759-22905004)
chr8 (128-252)||(24342222-24342347)
chr8 (8-252)||(24967417-24967663)
chr8 (8-227)||(23193620-23193840)
chr8 (85-252)||(21139830-21139998)
chr8 (8-252)||(29003795-29004041)
chr8 (108-227)||(23221291-23221411)
chr8 (177-252)||(15636239-15636314)
chr8 (177-251)||(15634467-15634541)
chr8 (177-251)||(18572165-18572239)
chr8 (177-252)||(25431892-25431967)
chr8 (149-252)||(1990311-1990415)
chr8 (180-252)||(24887161-24887233)
chr8 (8-98)||(18008439-18008530)
chr8 (85-227)||(6279937-6280079)
chr8 (159-252)||(23455745-23455838)
chr8 (113-252)||(26013135-26013274)
chr8 (28-98)||(23455897-23455968)
chr8 (186-247)||(18008304-18008365)
chr8 (177-252)||(22285138-22285213)
chr8 (197-252)||(31469534-31469589)
chr8 (177-247)||(15759727-15759797)
chr8 (165-247)||(42418357-42418440)
chr8 (165-252)||(6570419-6570506)
[»] chr6 (77 HSPs)
chr6 (8-252)||(3923799-3924046)
chr6 (28-252)||(17793676-17793901)
chr6 (13-250)||(26822019-26822259)
chr6 (13-252)||(25923068-25923310)
chr6 (8-252)||(12660124-12660366)
chr6 (8-252)||(19612415-19612661)
chr6 (8-252)||(28733817-28734063)
chr6 (8-252)||(23523624-23523871)
chr6 (8-252)||(19993759-19994005)
chr6 (8-252)||(24392573-24392818)
chr6 (8-252)||(25030895-25031142)
chr6 (8-252)||(18627589-18627839)
chr6 (8-252)||(18973821-18974064)
chr6 (8-196)||(23510076-23510267)
chr6 (8-252)||(20221351-20221594)
chr6 (8-252)||(22115335-22115578)
chr6 (116-248)||(12657826-12657959)
chr6 (85-252)||(20218231-20218399)
chr6 (85-252)||(22112256-22112424)
chr6 (94-227)||(18993358-18993492)
chr6 (145-252)||(29682770-29682877)
chr6 (145-252)||(31965330-31965437)
chr6 (13-252)||(25338919-25339161)
chr6 (145-252)||(20464539-20464645)
chr6 (85-252)||(26138824-26138992)
chr6 (163-249)||(16207545-16207631)
chr6 (159-252)||(15162377-15162469)
chr6 (8-235)||(20225264-20225489)
chr6 (8-235)||(22119248-22119473)
chr6 (85-252)||(25507752-25507920)
chr6 (8-252)||(15172389-15172631)
chr6 (85-252)||(26018121-26018289)
chr6 (177-252)||(23639694-23639769)
chr6 (159-252)||(5399391-5399484)
chr6 (85-252)||(26157494-26157662)
chr6 (85-245)||(29254153-29254314)
chr6 (177-252)||(17522201-17522276)
chr6 (8-252)||(16470137-16470382)
chr6 (177-250)||(34108829-34108901)
chr6 (85-177)||(24545379-24545471)
chr6 (8-98)||(14991956-14992047)
chr6 (8-252)||(4741147-4741391)
chr6 (145-247)||(18396317-18396418)
chr6 (85-252)||(6795103-6795270)
chr6 (177-252)||(9414546-9414621)
chr6 (177-252)||(13168537-13168613)
chr6 (13-100)||(20464688-20464776)
chr6 (180-252)||(21237786-21237858)
chr6 (8-252)||(20105308-20105553)
chr6 (14-118)||(28721008-28721114)
chr6 (165-252)||(8603662-8603750)
chr6 (192-252)||(23517207-23517267)
chr6 (177-252)||(32796355-32796430)
chr6 (8-98)||(5399543-5399634)
chr6 (8-170)||(20435488-20435650)
chr6 (13-170)||(20439196-20439353)
chr6 (8-93)||(29682928-29683013)
chr6 (159-252)||(14992106-14992199)
chr6 (88-252)||(25964078-25964242)
chr6 (88-252)||(25968725-25968889)
chr6 (85-252)||(25949484-25949651)
chr6 (8-98)||(15470844-15470934)
chr6 (159-210)||(15470993-15471044)
chr6 (45-98)||(13217072-13217125)
chr6 (159-252)||(13217184-13217272)
chr6 (141-252)||(19615009-19615120)
chr6 (159-211)||(29093748-29093800)
chr6 (8-98)||(22601034-22601125)
chr6 (145-252)||(22601171-22601277)
chr6 (45-98)||(15162528-15162581)
chr6 (165-252)||(1626313-1626401)
chr6 (165-252)||(22738000-22738088)
chr6 (19-98)||(29093859-29093939)
chr6 (141-252)||(29360479-29360589)
chr6 (8-74)||(14893772-14893839)
chr6 (8-65)||(5949372-5949430)
chr6 (8-104)||(31965194-31965290)
[»] scaffold0123 (1 HSPs)
scaffold0123 (8-247)||(14260-14500)
[»] scaffold0011 (1 HSPs)
scaffold0011 (8-252)||(172902-173149)
[»] scaffold0001 (5 HSPs)
scaffold0001 (8-252)||(520912-521159)
scaffold0001 (8-238)||(33054-33284)
scaffold0001 (8-238)||(38361-38591)
scaffold0001 (145-252)||(82425-82531)
scaffold0001 (8-100)||(82288-82381)
[»] scaffold0855 (1 HSPs)
scaffold0855 (8-252)||(3632-3875)
[»] scaffold0847 (1 HSPs)
scaffold0847 (8-252)||(3797-4040)
[»] scaffold0074 (2 HSPs)
scaffold0074 (8-252)||(22418-22661)
scaffold0074 (14-227)||(53923-54142)
[»] scaffold0264 (1 HSPs)
scaffold0264 (8-252)||(22104-22349)
[»] scaffold0014 (1 HSPs)
scaffold0014 (15-252)||(168356-168592)
[»] scaffold1559 (1 HSPs)
scaffold1559 (172-252)||(1565-1645)
[»] scaffold0713 (1 HSPs)
scaffold0713 (85-244)||(6463-6623)
[»] scaffold0098 (1 HSPs)
scaffold0098 (8-137)||(4488-4619)
[»] scaffold0362 (1 HSPs)
scaffold0362 (85-245)||(8979-9139)
[»] scaffold0213 (2 HSPs)
scaffold0213 (167-245)||(21768-21846)
scaffold0213 (8-98)||(21913-22004)
[»] scaffold0773 (1 HSPs)
scaffold0773 (90-247)||(1285-1442)
[»] scaffold0088 (1 HSPs)
scaffold0088 (179-252)||(38700-38773)
[»] scaffold0197 (1 HSPs)
scaffold0197 (85-252)||(8585-8752)
[»] scaffold0094 (1 HSPs)
scaffold0094 (185-252)||(1813-1880)
[»] scaffold1092 (1 HSPs)
scaffold1092 (177-252)||(1532-1607)
[»] scaffold1058 (1 HSPs)
scaffold1058 (177-252)||(2909-2984)
[»] scaffold0031 (1 HSPs)
scaffold0031 (165-252)||(77992-78080)
[»] scaffold0278 (1 HSPs)
scaffold0278 (165-247)||(12380-12463)
[»] scaffold0084 (1 HSPs)
scaffold0084 (162-252)||(49857-49948)
[»] scaffold0664 (1 HSPs)
scaffold0664 (163-207)||(3465-3510)
[»] scaffold0102 (1 HSPs)
scaffold0102 (177-230)||(36560-36613)
[»] scaffold0916 (1 HSPs)
scaffold0916 (165-252)||(3678-3765)


Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 8685526 - 8685770
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaatttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattc 107  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8685526 tagactattctcatgtttcacaatccttgtctaatttacttgttccaatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatta 8685625  T
Q  108 acaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8685626 acaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattag 8685725  T
Q  208 ggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8685726 ggttcgaggcttggtttgatagggattaggtcattagactcatcc 8685770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 13070173 - 13069935
Alignment:
Q  16 tctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaagta 114  Q
    ||||||||||| |||||||||| |||||| ||||||||| |||| |||||||| ||||| ||| ||||| ||  |||||||||| ||||||| |||||||    
T  13070173 tctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttcttcttttgatgcttcgatttgtatttgtgatgatgaattaacaagta 13070074  T
Q  115 ctaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattagggttcg 213  Q
    |||||||| ||||||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13070073 ctaaccctccgctgtcgcattacgagtttgatacttgttaattcattataaaaacggtgaaattagattagaaaatagatttacataaaattagggttcg 13069974  T
Q  214 aggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||  ||| |||||||||||||||||||||||||||||||    
T  13069973 agtgttgttttgatagggattaggtcattagactcatcc 13069935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 20224911 - 20225152
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| |||| ||||||||||| ||| ||| || |||| || | ||||||||||||||||||| ||| | || ||| ||||||||||| |||||||    
T  20224911 tagactattttcatatttcacaatccgtgtctaaattcacttatttcaatattaaaacttcatcttttgatccatcacttaatatttgtgatgatgaatt 20225010  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaa-atagattagaaaatagatttacataaaatt 205  Q
     ||||||||||||||| | || |||| |||||| ||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||    
T  20225011 aacaagtactaaccctccactttcgcattatgagtttgatacttgttaattcactataaaaacggtgaatttagattagaaaatagatttacatagaatt 20225110  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||||||||||||||||||  |||||| |||||||||||    
T  20225111 agggttcgaggcttggtttgattaggattaagtcattagact 20225152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 7908927 - 7908686
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttga-tatttgtgattatgaattcaca 110  Q
    ||||||||| ||||| ||||||||| |||||| ||||||||| |||| |||||||| ||||||||| |||||||| | |||||||||| ||||||| |||    
T  7908927 tattctcatatttcataatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcgctttaatatttgtgatgatgaattaaca 7908828  T
Q  111 agtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattaggg 209  Q
    | |||||||| | |||||||||||||||| |||| || |||||||||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  7908827 aatactaaccttccgctgtcgctttatgagtttggtatttgttaattcattaaaaaaa-ggtgaaactagattagaaagtagatttatataaaattaggg 7908729  T
Q  210 ttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    || |||||||||||||||  ||| |||| ||||||||||||||    
T  7908728 tttgaggcttggtttgattaggaataggccattagactcatcc 7908686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 17023647 - 17023415
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||| | |||||| ||||||||||| |||||||    
T  17023647 tagactattttcatgtttcgcaatccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccatcgcttaatatttgtgatgatgaatt 17023548  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaatt 205  Q
     |  |||             |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17023547 -atgagt-------------tgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattagattagaaaatagatttacataaaatt 17023462  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||    
T  17023461 agggttcgaggcttggtttgattaggattaggtcattagacttatcc 17023415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 17775186 - 17774957
Alignment:
Q  14 attctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaag 112  Q
    ||||||||||||| |||| ||||| |||||| ||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||          
T  17775186 attctcatgtttcgcaattcttgtttaatttcacttgttcaaatatcaaaacttcatctttcgatacttcccttgatatttgtgattatgaatt------ 17775093  T
Q  113 tactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttc 212  Q
        ||||||   || ||| |||||  |||||||||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||    
T  17775092 ----aaccctcgactttcgttttattgatttgatacttgttaattcattataaaaacagtgaaactgattagaaaataaatttacataaaattagggttc 17774997  T
Q  213 gaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||| |||||| ||||||||||||||||| ||||||    
T  17774996 gaggcttgctttgatggggattaggtcattagattcatcc 17774957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 19076487 - 19076258
Alignment:
Q  14 attctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaag 112  Q
    ||||||||||||| |||| ||||| |||||| ||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||          
T  19076487 attctcatgtttcgcaattcttgtttaatttcacttgttcaaatatcaaaacttcatctttcgatacttcccttgatatttgtgattatgaatt------ 19076394  T
Q  113 tactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttc 212  Q
        ||||||   || ||| |||||  |||||||||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||    
T  19076393 ----aaccctcgactttcgttttattgatttgatacttgttaattcattataaaaacagtgaaactgattagaaaataaatttacataaaattagggttc 19076298  T
Q  213 gaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||| |||||| ||||||||||||||||| ||||||    
T  19076297 gaggcttgctttgatggggattaggtcattagattcatcc 19076258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 22039175 - 22039007
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||||||| ||||||| |||| |||||||||| || |||||| |||||| |||| || ||||||||||||||||||||||||||||| ||||||    
T  22039175 ttgatatttgtgatgatgaattaacaaatactaaccctccgatgtcgcattatgagtttggtatttgttaattcattataaaaacggtgaaattagatta 22039076  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  22039075 gaaaatagatttacataaaattagggttcgaggcttggtttgattaggattaggtcattagacttatcc 22039007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 42244229 - 42244475
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||   | ||||||| |||||| ||||||||  |||| |||||||| ||||| ||| |||| ||| |||||||||||| ||||||    
T  42244229 tagactattctcatgttttgtagtccttgtctaatttcacttgttca-atatcaaaacttcttcttttgatgcttcactttgatatttgtgatgatgaat 42244327  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaat 204  Q
    | ||||||| ||||||| || ||||||||||||| |||||   || |||||||||||||||||||||||||| |||||||||| || |||||||||||||    
T  42244328 taacaagtattaaccctccgttgtcgctttatgagtttgaatattcttaattcattataaaaacggtgaaattagattagaaattaaatttacataaaat 42244427  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    
T  42244428 tagggttcgaggcttggtttgatcaggattaggtcattagactcatcc 42244475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 13418798 - 13418550
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttg--atatttgtgattatgaa 104  Q
    |||| |||||||||||||  ||||| |||| |||||| ||||||||| |||| |||||||| ||||||||| |||   ||   ||||||||||| || ||    
T  13418798 tagactattctcatgttttgcaatcgttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttttttttttatatttgtgatgataaa 13418699  T
Q  105 ttcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaa 203  Q
    || ||||||||||||||| || ||||||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||||||||| || ||||| ||||||    
T  13418698 ttaacaagtactaaccctccgttgtcgctttatgagtttgatactttttaattcattatataaacgatgaaattagattagaaagtatatttatataaaa 13418599  T
Q  204 ttagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||||    
T  13418598 ttagggttcgagccttggtttgattaggattaggtcattagactcatcc 13418550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 11577431 - 11577674
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| |||||| ||||||||| |||| |||||||||| ||||||| ||| |||||||||||||||| |   | |    
T  11577431 tagactattttcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttcatatttcgatcctttgcttgatatttgtgatgaatcaat 11577530  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||||| |   || ||| |   | ||||  |||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11577531 aacaactattaaccttcatctttcgatccttcaatta-atacttgtta-ttgattataaaaacggtgaattagattagaaaatagatttacataaaatta 11577628  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  11577629 gggtttgaggcttggtttgatagggattaggtcgttagactcatcc 11577674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 11869661 - 11869764
Alignment:
Q  149 ttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactc 248  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11869661 ttgttaattcattataaaaaaggtgaaatagattagaaaatagatttatataaaatttgggttcgaggcttggtttgatagggattaggtcattagactc 11869760  T
Q  249 atcc 252  Q
    ||||    
T  11869761 atcc 11869764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 17209915 - 17209753
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| |||  ||||||||||| |||| || |||||||||||||||||||||||||||| |||||||    
T  17209915 ttgatatttgagatgatgaattaacaaatactaaccctccgcattcgctttatgagtttggtatttgttaattcattataaaaacggtgaaattagatta 17209816  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagac 246  Q
    |||| |||||||| ||||||||||||||   || ||||||||||  |||||| ||||||||||    
T  17209815 gaaagtagatttatataaaattagggtttatggtttggtttgattaggattacgtcattagac 17209753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 41545599 - 41545690
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcat 250  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41545599 attataaaaacggtgaattagattagacaataaatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagattcat 41545690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 10850399 - 10850638
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||  |||||| |||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  10850399 tagactattctcatgtttcgcagcccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgatgatgaatt 10850498  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     | || |||| |||||| | |  ||||||  |  ||| | || ||| |||||||||||||||||||||||| || |||||||| |||||||| ||||||     
T  10850499 aaaaattactaaaccctccacgttcgcttcttagattag-taattgctaattcattataaaaacggtgaaattaaattagaaagtagatttatataaaac 10850597  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattaga 245  Q
    |||||||   || ||||||||||  |||||| |||||||||    
T  10850598 tagggtttatggtttggtttgattaggattatgtcattaga 10850638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 8532149 - 8532056
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||    
T  8532149 attataagaacggtgaaatagattagaaaatcgatttacataaaatttgggttcgaggcttggtttgatttggattaggtcattagacttatcc 8532056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 27992546 - 27992635
Alignment:
Q  164 aaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  27992546 aaaaacgatgaaattagattagaaaatagatttacataaaattagggttctaggcttggtttgataggaattaggtcattagactcatcc 27992635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 17042051 - 17041883
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| |||||||||| |  |||||| |||||| |||| || || |||||||||||||||||| |||||| |||||||    
T  17042051 ttgatatttgtgatgatgaattaacaaatactaaccctccattgtcgcattatgagtttggtatttcttaattcattataaaaacagtgaaattagatta 17041952  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||||||| |||||||||  |||   |||||||||||||  |||||| ||||||||||| ||||    
T  17041951 gaaagtagatttatataaaattaatgtttctggcttggtttgattaggattatgtcattagacttatcc 17041883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 17577036 - 17577122
Alignment:
Q  167 aacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||||||||||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||||    
T  17577036 aacggtgaaattagattagaaaatagatttacataaaatttgagttttaggcttggtttgatagggattaggtcattagactcatcc 17577122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 245
Target Start/End: Complemental strand, 17051064 - 17050903
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| | |||||||| || |||||| |||||| || | ||  |||||||||||||||| |||||||||| |||||||    
T  17051064 ttgatatttgtgatgatgaattaacaaattctaaccctccgttgtcgcattatgagttgggtatgtgttaattcattataacaacggtgaaattagatta 17050965  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattaga 245  Q
    |||| | |||||| ||||||||| ||||   |||||||||||||  |||||| |||||||||    
T  17050964 gaaagttgatttatataaaattaaggtttatggcttggtttgattaggattatgtcattaga 17050903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 192
Target Start/End: Complemental strand, 6237268 - 6237082
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||| | |||| |||||| ||||||| | ||||||||| | ||||||||||| |||||||| ||||||||||| |||||||    
T  6237268 tagactattctcatgtttcgcaacctttgtctaatttcacttgtttcaatattaaaaatccatctttcgatccttcgcttaatatttgtgatgatgaatt 6237169  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaataga 192  Q
     |||| |||| |||||| |||  |||| || | |  ||  || |||||||||||||||||||||||||||| ||||||||||| ||||    
T  6237168 aacaattactaaaccctccgcattcgc-ttcttagcttagtaattgttaattcattataaaaacggtgaaattagattagaaagtaga 6237082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 12697319 - 12697388
Alignment:
Q  180 attagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactca 249  Q
    ||||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||||||||||||||    
T  12697319 attagaaaatagatttacataaaattagggttatatgcttgatttgataggaattaggtcattagactca 12697388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 40846884 - 40846793
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||  |||||||||| || ||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  40846884 tagactattttcatgttttgcaatccttgtctatattcacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgat 40846793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 1993859 - 1993748
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||| |||||||||| ||| |||||| |||||| ||||||||| |||||||||||||||||||| ||  ||||| | ||| ||||||| |||||||    
T  1993859 tagactatactcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcaatctttcgcctaataattgtgatgatgaatt 1993760  T
Q  107 cacaagtactaa 118  Q
     |||| ||||||    
T  1993759 aacaattactaa 1993748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 1999018 - 1998907
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||| |||||||||| ||| |||||| |||||| ||||||||| |||||||||||||||||||| ||  ||||| | ||| ||||||| |||||||    
T  1999018 tagactatactcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcaatctttcgcctaataattgtgatgatgaatt 1998919  T
Q  107 cacaagtactaa 118  Q
     |||| ||||||    
T  1998918 aacaattactaa 1998907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 11827243 - 11827336
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| ||| ||||||||||||||||   ||| ||||||||||||||||||  | ||||||||||||  |||||| ||||||||||| ||||    
T  11827243 attataagaacagtgaaatagattagaacgaagagttacataaaattagggtttaaagcttggtttgattaggattacgtcattagacttatcc 11827336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 27992170 - 27992278
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||||||||||||  ||||||||| |||||| | ||||||| |||| ||| ||||||||||||||  ||||||||||||||| ||| ||||| |    
T  27992170 tagactattctcatgtttcgtaatccttgtctaatttcatttgttccaatatcaaa-cttcatctttcgatctttcgcttgatatttgagatgatgaaat 27992268  T
Q  107 cacaagtact 116  Q
     |||||||||    
T  27992269 aacaagtact 27992278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 11827093 - 11827184
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||| |||||||||| || ||| ||| ||||| |||||||||||||||||||| || | ||| ||||||||||||||    
T  11827093 tagactattttcatgtttcgcaatccttgtctatattcactggttccaatattaaaacttcatctttcaatccatcggttgatatttgtgat 11827184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 9762307 - 9762396
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtga 97  Q
    |||| ||||||||||||||||||||||| | |||||| | ||||||| ||| | ||| |||||||||||||  ||||||||||||||||||    
T  9762307 tagactattctcatgtttcacaatccttatctaatttcatttgttccaata-tcaaatttcatctttcgatcattcgcttgatatttgtga 9762396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 9774762 - 9774851
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtga 97  Q
    |||| ||||||||||||||||||||||| | |||||| ||||||||| ||| | ||| || ||||||||||  ||||||||||||||||||    
T  9774762 tagactattctcatgtttcacaatccttatctaatttcacttgttccaata-tcaaattttatctttcgatcattcgcttgatatttgtga 9774851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 14347762 - 14348006
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| |||||||||||||||||||| ||| || ||||||||  |||| |||||| || |||||| |   |   |||||||||| ||| |||||||    
T  14347762 tagactattttcatgtttcacaatccttgtctaaattcacttgttcgaatatcaaaactcca-ctttcgttttatgaattgatatttgagatgatgaatt 14347860  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaatt 205  Q
      ||| |||||||||| | || ||| ||    | ||||||| ||||||||| ||| ||||| ||||||| | |||||||||| |||  ||||||||||||    
T  14347861 accaattactaaccctccactttcgattctacagtttgataattgttaatttattttaaaa-cggtgaatttagattagaaactagggttacataaaatt 14347959  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||  || |||| ||||||  |||||| ||||||||||| ||||    
T  14347960 agggtttaagacttgatttgattaggattatgtcattagacttatcc 14348006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 27407472 - 27407386
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattaga 245  Q
    ||||||| |||||||||||| |||||||  |||  ||||||||||||||||||  | ||||||||||||  |||||| |||||||||    
T  27407472 attataagaacggtgaaataaattagaatttagggttacataaaattagggtttaaagcttggtttgattaggattacgtcattaga 27407386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 13605370 - 13605204
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaata-gatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| | || ||||||      ||||||| ||||||||||||  ||||| ||||||| |  |||||    
T  13605370 ttgatatttgagatgatgaattaacaattactaaccctccactttcgcttctactgtttgataattgttaattcatgttaaaa-cggtgaatttcgatta 13605272  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||  ||||||||||||||| ||  ||||||||||||||  |||||| ||||||||||| ||||    
T  13605271 gaaattagggttacataaaattaggttta-aggcttggtttgattaggattatgtcattagacttatcc 13605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 8532299 - 8532208
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||  |||||||||| |||  | ||||||||| ||||||||||||||||||||||| | | |||| |||||||||||    
T  8532299 tagactattttcatgttttgcaatccttgtctaaactcacttgttccaatattaaaacttcatctttcgatccatagcttaatatttgtgat 8532208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 11399118 - 11399043
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||  |||||||| |||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  11399118 tagattagaaactagggttacataagattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 11399043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 25055256 - 25055181
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||  |||||||| |||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  25055256 tagattagaaactagggttacataagattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 25055181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 27407611 - 27407534
Alignment:
Q  18 tcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttg 94  Q
    ||||||||| |||||||||| || ||| || |||||| ||||| ||||||||||||||||| | |||||| |||||||    
T  27407611 tcatgtttcgcaatccttgtctatattcacatgttccaatattgaaacttcatctttcgatccatcgcttaatatttg 27407534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 19566834 - 19566922
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  |||||||| |||||||||  ||||||||||||||  |||||| || |||||||| ||||    
T  19566834 aaaacggtgaatttagattagaaactagggttacataagattagggtttaaggcttggtttgattaggattatgtaattagacttatcc 19566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 11869592 - 11869624
Alignment:
Q  79 cttcgcttgatatttgtgattatgaattcacaa 111  Q
    |||||||||||||||||||||||||||| ||||    
T  11869592 cttcgcttgatatttgtgattatgaattaacaa 11869624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 14826767 - 14826731
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttc 212  Q
    |||||||||||| ||||||||||||||||||||||||    
T  14826767 tagattagaaaaatagatttacataaaattagggttc 14826731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 17480721 - 17480633
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  |||||||| |||||||||  | ||||||||||||  |||||| |||||| |||| ||||    
T  17480721 aaaacggtgaatttagattagaaattagggttacataagattagggtttaaagcttggtttgattaggattatgtcattggacttatcc 17480633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 36076446 - 36076358
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||   |||||||||||||||||  | ||||||||||||  |||||| ||||||| ||| ||||    
T  36076446 aaaacggtgaatttagattagaaactagggctacataaaattagggtttaaagcttggtttgattaggattatgtcattaaacttatcc 36076358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 16384650 - 16384880
Alignment:
Q  23 tttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaagtactaaccc 121  Q
    ||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16384650 tttcacaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattaacaagtactaaccc 16384749  T
Q  122 ttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttgg 221  Q
    |    | ||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16384750 tcaaatttcgttttattgatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttgg 16384849  T
Q  222 tttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||| ||||||||||||||||    
T  16384850 tttgatagggattatgtcattagactcatcc 16384880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 16148127 - 16148374
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||| ||||||||  |||||||||| |||||| |||||| || || | |||||||| | ||||||| |||||||| |||||||||||| ||||||    
T  16148127 tagactattatcatgttttgcaatccttgtttaatttcacttgtgccaatttcaaaacttcttatttcgatgcttcgctttgatatttgtgatgatgaat 16148226  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  16148227 taacaagtactaaccctccgctgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattagattagaaagtagatttacataaaat 16148326  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    
T  16148327 tagggttcgaggcttggtttgattaggattaggtcattagactcatcc 16148374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 12059458 - 12059705
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    ||||||||||||||||||| |||||||||| |||||| |||| |||| |||| |||||||| ||||||||| |||||||| |||||||||||| ||||||    
T  12059458 tagattattctcatgtttcgcaatccttgtctaatttcacttcttccaatatcaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaat 12059557  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |    
T  12059558 taacaagcactaaccctccgctgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattagattagaaagtaaatttacatcaact 12059657  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| ||||||||||   ||| ||||||||||||||||||    
T  12059658 tagggttcgaggtttggtttgattatgatcaggtcattagactcatcc 12059705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 55 - 252
Target Start/End: Original strand, 13799165 - 13799364
Alignment:
Q  55 atattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgtt 153  Q
    |||| |||||||| ||||||||| |||||||| |||||||||||| ||||||  ||||||| ||||||| || ||||||||||||| |||||||||| ||    
T  13799165 atatcaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaatcaacaagtattaaccctccgttgtcgctttatgagtttgatacttctt 13799264  T
Q  154 aattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  13799265 aattcattataaaaacggtgaaattagattagaaattagatttacataaaattagggttcgatgcttggtttgatcaggattaggtcattagactcatcc 13799364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 26194637 - 26194398
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||| ||||     |||||||||||||| ||||||||||||||||||||||||||||    
T  26194637 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatat-----cttcatctttcgatccttcgcttgatatttgtgattatgaatt 26194543  T
Q  107 cacaagtactaacccttcgc-tgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatt 205  Q
     | ||  | ||| | ||||| | ||| |  ||  |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26194542 aaaaaccattaaac-ttcgcctttcggtccatcgatta-atacttgttaattcattataaaaacggtgagatagattagaaaatagatttacataaaatt 26194445  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  26194444 agggttcgaggtttggtttgatagggattaggtcattagactcatcc 26194398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 23299296 - 23299053
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattta-cttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| |||||||||||||||||||| ||| ||| |||||||  |||| ||||||||||||||||||  ||||||||||||||||||  |   | |    
T  23299296 tagactattttcatgtttcacaatccttgtctaaattaacttgttcaaatatcaaaacttcatctttcgatcattcgcttgatatttgtgacgaatcaat 23299197  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| |  ||  |||  |||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||||    
T  23299196 aacaactattaaacttcatctttcgatccatcgatta-atacttgtta-ttgattataagaatggtgaaatagattagaaaatagatttacataaaatta 23299099  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  23299098 gggttccaggcttggtttggtagggattaggtcattagactcatcc 23299053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 20860375 - 20860616
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||| |||||||| |||||||||| |||||| ||||||||| |||| |||||||||||||||||| ||||||||||||| ||||||||   | |    
T  20860375 tagagtattcccatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgatccttcgcttgatatatgtgattaatcaat 20860474  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| ||  |  |||  |||||||||| || ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  20860475 aacaactattaaacttcatctttcgattcttcgatta-atacttgtta-ttgattataaaaacggtgaattagattagaaaatagatttacataatatta 20860572  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatc 251  Q
    ||||||||||||| |||||||||||||||  | ||||||||||||    
T  20860573 gggttcgaggctt-gtttgatagggattacttaattagactcatc 20860616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 20412659 - 20412415
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| |||||||||||||||||||| ||| || ||||||||| |||| |||||| || |||||| | | |   |||||||||| ||| |||||||    
T  20412659 tagactattttcatgtttcacaatccttgtctaaattcacttgttccaatatcaaaactcca-ctttcgcttcatgaattgatatttgagatgatgaatt 20412561  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaa-atagattagaaaatagatttacataaaatt 205  Q
     |||| |||||||||| | || |||||| |||| |||| || ||||||||||||||| |||||||||||  ||||||||||| |||  ||||||||||||    
T  20412560 aacaattactaaccctccactttcgcttcatgagtttggtatttgttaattcattatgaaaacggtgaatttagattagaaattagggttacataaaatt 20412461  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||  ||||||||||||||  |||||| ||||||| ||| ||||    
T  20412460 agggtt-aaggcttggtttgattaggattatgtcattaaacttatcc 20412415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 25404911 - 25404999
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25404911 attataagaacggtgaaatagattagaaaatagatttaaataaaattagggttcgaggcttggtttgattaggattaggtcattagact 25404999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 20497814 - 20497720
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaatta-gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| ||||| |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20497814 attataaaaacagtgaattagattagaaaatagattaacaaaaaattaagggttcgaggcttggtttgatagggattaggtcattagactcatcc 20497720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 22411517 - 22411271
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||| |||||||| ||| |||||| |||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  22411517 tagactattcccatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgatgatgaatt 22411418  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     |||| |||| ||||||||  |||    || | |  ||  || |||  ||||||||||||||||| ||||| ||||||||||| ||| |||| ||||||     
T  22411417 aacaattactaaacccttc-atgtttgcttcttagcttagtaattgcaaattcattataaaaacgttgaaattagattagaaagtaggtttatataaaac 22411319  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  22411318 tagggtttatggtttggtttgattaggattacgtcattagacttatcc 22411271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 28763632 - 28763775
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||| ||| ||||||| |||| || || |||| | || ||||||||||| ||||||| ||||||||||||||| | ||| |||||| |||||||    
T  28763632 ttgatatttgagatgatgaattaacaaatattagccctccactttcgctttatgagtttgatatttgttaattcattatgataacagtgaaattagatta 28763731  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgat 227  Q
    |||| || ||||| ||||||||||||||| ||||||||||||||    
T  28763732 gaaagtatatttatataaaattagggttcaaggcttggtttgat 28763775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 16354493 - 16354306
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||| |||||| |||||| ||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||| |||||||    
T  16354493 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcacttaatatttgtgatgatgaatt 16354394  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagat 193  Q
     |||| |||| ||||||  ||  |||| || | |  ||  || ||| |||||||||||||||||||||||| ||||||||||| |||||    
T  16354393 aacaattactaaaccctcggcgttcgc-ttcttagcttagtaattgctaattcattataaaaacggtgaaattagattagaaagtagat 16354306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 15421349 - 15421261
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||| |||||| ||||||||||||||||||| |||| |||||||||| |||||| |||| |||||||||||||||||||||||||||    
T  15421349 aaaacgatgaaattagattagaaaatagatttaaataagattagggttctaggcttagtttcatagggattaggtcattagactcatcc 15421261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 2130185 - 2130111
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  2130185 tagattagaaaatagatttaaataagattagggttctaggcttggtttgata-ggattaggtcattagactcatcc 2130111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 20448815 - 20448722
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaa-tttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgatta 100  Q
    |||| |||||||| ||||  |||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||    
T  20448815 tagactattctcaagtttatcaatccttgtctaaatttacttgttccaatatcaaaacttcatctttcgatccttcacttgatatttgtgatta 20448722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 20534581 - 20534488
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaa-tttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgatta 100  Q
    |||| |||||||| ||||  |||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||    
T  20534581 tagactattctcaagtttatcaatccttgtctaaatttacttgttccaatatcaaaacttcatctttcgatccttcacttgatatttgtgatta 20534488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 16527503 - 16527578
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||| |||| |||||||||| ||||||| ||||||| | |||| || |||||||||||||    
T  16527503 tagattagaaaatagatttaaataagattagggttctaggcttgatttgatatgaattaagttattagactcatcc 16527578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 52169254 - 52169159
Alignment:
Q  153 taattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||| |||||| |||||||   || ||||||||||  |||||| |||||||||||    
T  52169254 taatttattataaaaacggtgaaattagattagaaagtagatttatataaaactagggtttatggtttggtttgattaggattatgtcattagact 52169159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 30818865 - 30818951
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatattt 93  Q
    |||||||||||||| |||| |||||||||  ||| || ||||||||| ||||||||||||||||||||||| | |||||| ||||||    
T  30818865 tagattattctcatatttcgcaatccttgactaaattcacttgttccaatattaaaacttcatctttcgatccatcgcttaatattt 30818951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 20497959 - 20497871
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgatta 100  Q
    ||||||||  |||| |||||||||| ||| || |||||||||  ||| |||||||||||||||||| ||||||||||||||||| ||||    
T  20497959 tattctcaaatttctcaatccttgtctaaattcacttgttccactatcaaaacttcatctttcgatccttcgcttgatatttgttatta 20497871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 24680381 - 24680306
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||||||||||  ||||| ||||||||||||||||    
T  24680381 tagattagaaaaatagattcacataaaattagggttataggcttggtttgata-agattatgtcattagactcatcc 24680306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 25727279 - 25727112
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||| ||| ||||||| |||| || ||||||| | || ||||||    | ||||||| ||||||||||||  ||||| ||||||| | ||||||    
T  25727279 ttgatatttgagatgatgaattaacaattattaaccctccactttcgcttctacagtttgataattgttaattcatgttaaaa-cggtgaatttagatta 25727181  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||  |||||||||||||||| |  | ||||||||||||  |||||| ||||||||||| ||||    
T  25727180 gaaattagggttacataaaattaggggttaaagcttggtttgattaggattatgtcattagacttatcc 25727112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 25735687 - 25735520
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||| ||| ||||||| |||| || ||||||| | || ||||||    | ||||||| ||||||||||||  ||||| ||||||| | ||||||    
T  25735687 ttgatatttgagatgatgaattaacaattattaaccctccactttcgcttctacagtttgataattgttaattcatgttaaaa-cggtgaatttagatta 25735589  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||  |||||||||||||||| |  | ||||||||||||  |||||| ||||||||||| ||||    
T  25735588 gaaattagggttacataaaattaggggttaaagcttggtttgattaggattatgtcattagacttatcc 25735520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 252
Target Start/End: Complemental strand, 28208210 - 28208047
Alignment:
Q  89 tatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaa 187  Q
    |||||| ||| ||||||| |||| |||||||||| | || ||||||    | ||||||| ||||||||||||  ||||| | ||||| | ||||||||||    
T  28208210 tatttgagatgatgaattaacaattactaaccctccactttcgcttctacagtttgataattgttaattcatgttaaaa-cagtgaatttagattagaaa 28208112  T
Q  188 atagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
     |||  |||||||| |||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  28208111 ctagggttacataagattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 28208047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 21240470 - 21240400
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgat 77  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||| |||| |||||||| |||||||||    
T  21240470 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgat 21240400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 21924884 - 21924824
Alignment:
Q  191 gatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatc 251  Q
    |||||||||||||||||||||  |||||||||||||   |||||| |||||||||||||||    
T  21924884 gatttacataaaattagggttttaggcttggtttgaataggattaagtcattagactcatc 21924824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 15346686 - 15346773
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatc 251  Q
    |||||||||| || ||||||||||||||  |||||||||||||| |||  ||||||| |||||    |||||||||||||||||||||    
T  15346686 aaaacggtgagattagattagaaaatagggttacataaaattagagttttaggcttgctttgaataagattaggtcattagactcatc 15346773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 20898345 - 20898424
Alignment:
Q  20 atgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||||||||||||||||| |||||| ||||||||  |||| |||| ||  ||||||||| ||| ||||||||||||||||    
T  20898345 atgtttcacaatccttgtctaatttcacttgttcgaatatcaaaattttctctttcgatcctttgcttgatatttgtgat 20898424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 25404801 - 25404852
Alignment:
Q  47 ttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    ||||||| ||||||||||||||||||||||| | |||||| |||||||||||    
T  25404801 ttgttccaatattaaaacttcatctttcgatccatcgcttaatatttgtgat 25404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Original strand, 30818957 - 30818992
Alignment:
Q  217 cttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||||||    
T  30818957 cttggtttgatagggattaggtcattagactcatcc 30818992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 52755168 - 52755274
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||| ||| ||||||||||||||||||||| |||  ||||||||| |||||| |  |  |||||||||||  |||||| ||||||||    
T  52755168 atacttgtta-ttgattgtaagaacggtgaaatagattagaaattagggttacataaagttaggggttaaaacttggtttgattaggattatgtcattag 52755266  T
Q  245 actcatcc 252  Q
    ||| ||||    
T  52755267 acttatcc 52755274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 52755051 - 52755121
Alignment:
Q  28 caatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtga 97  Q
    |||||||||| || ||| ||||||| | |||||||||||||||||||||||  ||||||| ||||||||||    
T  52755051 caatccttgtctatattcacttgtttcaatattaaaacttcatctttcgatctttcgcttaatatttgtga 52755121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 16431797 - 16431709
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  ||||||||||||||||||  | ||||| ||||||  |||||| ||||||||||| ||||    
T  16431797 aaaacggtgaatttagattagaaattagggttacataaaattagggtttaaagcttgatttgattaggattatgtcattagacttatcc 16431709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 46143381 - 46143469
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  |||||||| ||||||||   ||||||||||||||  |||||| ||||||||||| ||||    
T  46143381 aaaacggtgaatttagattagaaactagggttacataagattagggtgtaaggcttggtttgattaggattatgtcattagacttatcc 46143469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 19874988 - 19875063
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||  |||||||| |||||||||  || |||||||||||  |||||| ||||||||||| ||||    
T  19874988 tagattagaaactagggttacataagattagggtttaagtcttggtttgattaggattatgtcattagacttatcc 19875063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 20448665 - 20448632
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaataga 192  Q
    ||||||||||||||||| ||||||||||||||||    
T  20448665 attataaaaacggtgaactagattagaaaataga 20448632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 20534431 - 20534398
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaataga 192  Q
    ||||||||||||||||| ||||||||||||||||    
T  20534431 attataaaaacggtgaactagattagaaaataga 20534398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 17716997 - 17716910
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  |||||||| |||||||||  || |||||||||||  |||||| ||||||||||| ||||    
T  17716997 aaaacggtgaatttagattagaaactagggttacataagattagggttaaag-cttggtttgattaggattatgtcattagacttatcc 17716910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 19364881 - 19364793
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  ||||| || |||||||||  ||||||||||||||  |||||| |||| |||||| ||||    
T  19364881 aaaacggtgaatttagattagaaactagggttacacaagattagggtttaaggcttggtttgattaggattatgtcaatagacttatcc 19364793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 49379484 - 49379572
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||| | |||  |||||||| |||||||||  | ||||||||||||  |||||| ||||||||||| ||||    
T  49379484 aaaacggtgaatttagattagagattaggattacataagattagggttaaaagcttggtttgattaggattatgtcattagacttatcc 49379572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 4541575 - 4541330
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||  |||||||||| |||||| ||||||| | |||| |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  4541575 tagactattctcatgttttgcaatccttgtctaatttcacttgtttcaatataaaaacttcatctttagatacttcgcttgatatttgtgattataaatt 4541476  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
      |||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4541475 atcaagtactaaccctccgttgtcgctttttgaatttgatacttgttaattcattataaaaacggtgaaatatattagaaaatagatttacataaaatta 4541376  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  4541375 gggttcgatgcttggtttgatagggattaggtcattagtctcatcc 4541330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 4982829 - 4983073
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||| | |||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  4982829 tagactattctcatgtttcgcaatccttatctaatttcacttgttccaatatcaaaacttcatctttcgatactacgcttgatatttgtgattatgaatt 4982928  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     ||||||| |||||||   || ||| |||||  ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  4982929 aacaagtattaaccctcaactttcgttttattgatttgatacttgttaattcattacaaaaacggtcaaatagattag-aaatagatttacataaaatta 4983027  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4983028 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 4983073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 4256294 - 4256541
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||| |||||||| | |||||| ||||||||| |||| |||||||| ||||||||| |||||||| ||||||| |||| ||||||    
T  4256294 tagactattctcatgtttctcaatccttatctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcgctttgatatttttgatgatgaat 4256393  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||||    
T  4256394 taacaagtactaacccttcgctgtctcattatgagtttgatacttgttaattcattataaaaatggtgaaattagattagaaagtggatttacataaaat 4256493  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| |||||||||||||||  ||||||||| |||||||||||||    
T  4256494 tagggtttgaggcttggtttgattaggattaggttattagactcatcc 4256541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 4465471 - 4465710
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaa 111  Q
    |||| |||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  4465471 tattttcatgttttacaatccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcgcttgatatttatgattatgaattaacaa 4465570  T
Q  112 gtactaacccttcgctgtcgctttat-gaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggt 210  Q
      | ||| | |   || ||  |   | ||||   |||||||||||||||||| ||| |||||||| || |||||||||||||||||||||||||||||||    
T  4465571 ccattaaacttcacctttcagtccctcgaata--atacttgttaattcattacaaatacggtgaactaaattagaaaatagatttacataaaattagggt 4465668  T
Q  211 tcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4465669 tcgaggcttggtttgatagggattaggtcattagactcatcc 4465710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 17911987 - 17911748
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaa 111  Q
    |||| ||||||||| |||||||||| |||  | ||||||||| |||| |||| ||||||||||||| |||| ||||||||||||||||||||||| | ||    
T  17911987 tattttcatgtttcgcaatccttgtctaacatcacttgttccaatatcaaaatttcatctttcgatccttcacttgatatttgtgattatgaattaataa 17911888  T
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggtt 211  Q
     || ||| | |   || ||  |  || ||||  ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  17911887 ctattaaacttcacctttcagtccatcaatta-atacttgttaattcattataagaacggtgaaatatattagaaaatagatttacataaaattagggtt 17911789  T
Q  212 cgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  17911788 cgaagcttggtttgatagggattaggtcattagactcatcc 17911748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 679182 - 679419
Alignment:
Q  14 attctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaag 112  Q
    |||||||||||||||||||||||| |||||| |||||||||  ||| ||| |||||||||||||| |||||||||||||||||||| ||||| | ||||     
T  679182 attctcatgtttcacaatccttgtctaatttcacttgttccagtatcaaa-cttcatctttcgatccttcgcttgatatttgtgatgatgaaataacaac 679280  T
Q  113 tactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttc 212  Q
    || ||| | |   || ||  |   |  |||  |||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  679281 tattaaacttcacctttcagtccttagatta-atacttgttatttcattagaaaaacgatgaaatagattagaaaatagatttacataagattagggttc 679379  T
Q  213 gaggcttggtttgatagggattaggtcattagactcatcc 252  Q
     ||| |||||||||||||||||||||||||||||||||||    
T  679380 taggtttggtttgatagggattaggtcattagactcatcc 679419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 21005205 - 21005450
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||   | | ||| |   |   |||||||||||||| |||||||    
T  21005205 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaaactctgt-tgtcgctttatgaattgatatttgtgatgatgaatt 21005303  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaatt 205  Q
     ||||  ||||||||| || ||||||||||||| |||| || ||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  21005304 aacaaacactaaccctccgttgtcgctttatgagtttggtatttgttaattcattataaaaacggggaaattagattagaaagtagatttatataaaatt 21005403  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||  |||||||||||||  |||||| ||||||||||| ||||    
T  21005404 agggttcatggcttggtttgattaggattatgtcattagacttatcc 21005450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 30063780 - 30063884
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  30063780 atacttgtta-ttgattataaaaacggtgaaatagattagaaaatagatttacataagattagggttcgaggcttggcttgatagggattaggtcattag 30063878  T
Q  245 actcat 250  Q
    ||||||    
T  30063879 actcat 30063884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 38877675 - 38877568
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| ||||||| | ||||  ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  38877675 atacttgttatttcattagataaacaatgaaataaattagaaaatagatttacataagattagggttcgagtcttggtttgatagggattaggtcattag 38877576  T
Q  245 actcatcc 252  Q
    ||||||||    
T  38877575 actcatcc 38877568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 11997018 - 11997223
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||| |||||| |||||| ||||||||| ||||||||||||||||||||||| |||||| | ||||||||||| |||||||    
T  11997018 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcgcctaatatttgtgatgatgaatt 11997117  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     |||| |||| || ||| |||  ||||||  | |  ||  || ||| ||||||||||||||| |||||||| ||||||||||| |||||||| ||||||     
T  11997118 aacaattactaaatcctccgcgttcgcttcct-agcttagtaattgctaattcattataaaaccggtgaaattagattagaaagtagatttatataaaac 11997216  T
Q  205 tagggtt 211  Q
    |||||||    
T  11997217 tagggtt 11997223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 15523429 - 15523191
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaa 111  Q
    ||||||||||||   |||||||||| || ||| ||||||||| |||| ||| |||||||||||||| |||||||||||||||||||| ||||| | ||||    
T  15523429 tattctcatgttgtgcaatccttgtctactttcacttgttccaatatcaaa-cttcatctttcgatccttcgcttgatatttgtgatgatgaaataacaa 15523331  T
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggtt 211  Q
     || ||| | |   || ||| |   |  |||  |||||||||| |||| || |||||| |  |||| |||| |||||||||||||||||| |||| ||||    
T  15523330 ctattaaacttcacctttcggtccttcgatta-atacttgttatttcagtagaaaaactgcaaaattgatttgaaaatagatttacataagattacggtt 15523232  T
Q  212 cgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    | ||||||||||||||||||||||||||||||||| |||||    
T  15523231 ctaggcttggtttgatagggattaggtcattagacgcatcc 15523191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 17206252 - 17206320
Alignment:
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17206252 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattatgtcattagactcatcc 17206320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 11483687 - 11483780
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||| ||||||| ||| ||||    
T  11483687 attataagaacggtgaaatagattagaaaatagatttacataaaattaaggttcgaggcttggtttgattaagattatgtcattatacttatcc 11483780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 252
Target Start/End: Original strand, 6257287 - 6257450
Alignment:
Q  90 atttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaa 188  Q
    ||||||||| ||||||| |||| || |||||||  |   ||||||||||| |||| || ||||||||||||| |||||||||||||| |||||||||||     
T  6257287 atttgtgatgatgaattaacaaatattaaccctctgtgttcgctttatgagtttggtatttgttaattcattttaaaaacggtgaaattagattagaaag 6257386  T
Q  189 tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||| ||||||||||||||   || ||||||||||  |||||  ||||||||||| ||||    
T  6257387 tagatttatataaaattagggtttatggtttggtttgattaggatttcgtcattagacttatcc 6257450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 39389143 - 39388897
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||| |||||| |||||| ||||||||| ||||||||||||||||||||||| ||||||   ||||||||||| |||||||    
T  39389143 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcgcccaatatttgtgatgatgaatt 39389044  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     |||| |||| ||| |||||   |||| || | |  ||  || ||| ||||||||||||||| |||||||| || |||| ||| | |||||| ||||||     
T  39389043 aacaattactaaactcttcgtgttcgc-ttcttagcttagtaattgctaattcattataaaaccggtgaaattatattacaaagttgatttatataaaac 39388945  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  39388944 tagggtttatggtttggtttgattaggattacgtcattagacttatcc 39388897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 3376273 - 3376440
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| | || ||||||    | ||||||| ||||||||||||  ||||| ||||||| | ||||||    
T  3376273 ttgatatttgagatgatgaattaacaattactaaccctccactttcgcttctacagtttgataattgttaattcatgttaaaa-cggtgaatttagatta 3376371  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||  ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  3376372 gaaaatagggttacataaaattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 3376440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 33610050 - 33609887
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaata-gatta 183  Q
    |||||||||| ||| ||||||  |||| |||||||||| |||  | ||||||||| ||||    |||||||||||||||||||||||||||||  |||||    
T  33610050 ttgatatttgagatgatgaata-acaaatactaaccctccgcgtttgctttatgagtttg----ttgttaattcattataaaaacggtgaaatttgatta 33609956  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||||||| ||||||||||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  33609955 gaaagtagatttatataaaattagggtttatggtttggtttgattaggattatgtcattagacttatcc 33609887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 48713850 - 48713610
Alignment:
Q  13 tattctcatgtttcacaatccttgtgt-aatttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaa 111  Q
    |||| ||||||||| |||||||||| | |||| ||||||||| |||| ||||||||  |||||| |   |   |||||||||| ||| ||||||| ||||    
T  48713850 tattttcatgtttcgcaatccttgtctcaattcacttgttccaatatcaaaacttccactttcgcttgatgaattgatatttgagatgatgaattaacaa 48713751  T
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggt 210  Q
     |||||||||| |  | |||||| |||| | || || ||||||||||||  | ||||||||||| | |||||||||| |||  |||||||||||||||||    
T  48713750 ttactaaccctccattttcgcttcatgagtgtggtaattgttaattcatg-tgaaaacggtgaatttagattagaaattagggttacataaaattagggt 48713652  T
Q  211 tcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |  ||||||||||||||   ||||| ||||||||||| ||||    
T  48713651 ttaaggcttggtttgattacgattatgtcattagacttatcc 48713610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 4316833 - 4316908
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  4316833 tagattagaaaaatagattcacataaaattagggttctaggcttggtttgata-ggattaggtcattagactcatcc 4316908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 4460621 - 4460685
Alignment:
Q  186 aaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcat 250  Q
    ||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  4460621 aaatagatttacataaaattaaggttcgaggcttggtttgattaggattaggtcattagactcat 4460685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 6712301 - 6712369
Alignment:
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||    
T  6712301 gaaaatagatttacataaaattagggttctaggcttggtttgaataggattaggtcattagactcatcc 6712369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 8787108 - 8787212
Alignment:
Q  149 ttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||   || ||||||||||  |||||| |||||||||||    
T  8787108 ttgttaattcattataaaaacggagaaattagattagaaagtagatttatataaaattagggtttatggtttggtttgattaggattacgtcattagact 8787207  T
Q  248 catcc 252  Q
     ||||    
T  8787208 tatcc 8787212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 8836974 - 8836781
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||| |||| ||| || |  || ||| |   |   ||||||||| | || |||||||    
T  8836974 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaagct-ctgctctcgctttatgaattgatattttttatgatgaatt 8836876  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataa 201  Q
     |||| |||||||||| |||  ||||||||||| |||| ||  ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  8836875 aacaa-tactaaccctccgcgttcgctttatgagtttggtatgtgttaattcattataaaaacggtgaaattagattagaaagtagatttatataa 8836781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 8780205 - 8780373
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaa-cccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatt 182  Q
    |||||||||| ||| ||||||| |||| |||||| |||| |||  ||||||  | | |||| || |||||||||||||||||| | |||||||| |||||    
T  8780205 ttgatatttgagatgatgaattaacaattactaaaccctccgcgttcgcttctt-agtttggtaattgttaattcattataaatatggtgaaattagatt 8780303  T
Q  183 agaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||| |||||||| ||||||||||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  8780304 agaaagtagatttatataaaattagggtttatggtttggtttgattaggattacgtcattagacttatcc 8780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 1462803 - 1462719
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcatta 243  Q
    ||||||| |||||||||||| |||||||| ||| || ||||||||||||||||| ||||||||||||||  |||||| |||||||    
T  1462803 attataagaacggtgaaatatattagaaattaggttgacataaaattagggttcaaggcttggtttgattaggattatgtcatta 1462719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 25034168 - 25034243
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| |||||| |||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  25034168 tagattagaaaaatagattcacataaaatttgggttctaggcttggtttgata-ggattaggtcattagactcatcc 25034243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 39271487 - 39271320
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaa-atagatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| | || |||||| |||| ||||||| ||||||||||| | |  ||||||||||  ||||| |    
T  39271487 ttgatatttgagatgatgaattaacaattactaaccctccactttcgcttcatgagtttgataattgttaattca-tgttgaaacggtgaatttagataa 39271389  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||  |||||||| ||||| |||  ||||||||||||||  |||||| ||||||||||| ||||    
T  39271388 gaaattagggttacataagattagagtttaaggcttggtttgattaggattatgtcattagacttatcc 39271320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 1614228 - 1614135
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| ||||||||||||||||||||| ||   ||||||||||||||||||  | ||||||||||||  |||||| ||||||||||| ||||    
T  1614228 attataagaacggtgaaatagattagaaagtaaggttacataaaattagggtttaaagcttggtttgattaggattatgtcattagacttatcc 1614135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 9562265 - 9562098
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaa-cccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatt 182  Q
    |||||||||| ||| ||||||| |||| |||||| |||| |||  ||||||  | | |||| || |||||||||||||||||||| ||||||| ||||||    
T  9562265 ttgatatttgagatgatgaattaacaattactaaaccctccgcgttcgcttctt-agtttggtaattgttaattcattataaaaatggtgaaattagatt 9562167  T
Q  183 agaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||| |||||||  ||||||||||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  9562166 agaaagtagattt-tataaaattagggtttatggtttggtttgattaggattacgtcattagacttatcc 9562098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 247
Target Start/End: Original strand, 9193774 - 9193937
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaa-cccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatt 182  Q
    |||||||||| ||| ||||||| |||| |||||| |||| |||  ||||||  | | |||| || |||||||||||||||||||||| |||||| |||||    
T  9193774 ttgatatttgagatgatgaattaacaattactaaaccctccgcgttcgcttctt-agtttggtaattgttaattcattataaaaacgatgaaattagatt 9193872  T
Q  183 agaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||| || ||||| |||||||||| |||   || ||||||||||  |||||| |||||||||||    
T  9193873 agaaagtatatttatataaaattagagtttatggtttggtttgattaggattacgtcattagact 9193937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 12348374 - 12348299
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttg 87  Q
    ||||| ||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||  ||||||||    
T  12348374 tattcccatgtttcacaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgatcattcgcttg 12348299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 16897094 - 16897188
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttgg-tttgatagggattaggtcattagactcatcc 252  Q
    ||||||| ||||||||||||||||| ||| |||  ||||||||||||||||||  |||||||| ||||||  |||||| ||||||||||| ||||    
T  16897094 attataagaacggtgaaatagattaaaaattagggttacataaaattagggtttaaggcttggttttgattaggattacgtcattagacttatcc 16897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 46274353 - 46274288
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggttt 224  Q
    ||||||| ||||||||||||||||||||| |||  ||||||||||||||||||  |||||||||||    
T  46274353 attataagaacggtgaaatagattagaaattagggttacataaaattagggtttaaggcttggttt 46274288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 19515121 - 19515210
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaata 178  Q
    |||||||||||||| ||||||| |||| ||||    || |||  ||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  19515121 ttgatatttgtgatgatgaattaacaaatact----ctccgcattcgctttatgagtttggtatttgttaattcattataaaaacggtgaaata 19515210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 4460476 - 4460567
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| |||||||||  ||||||||| ||| || ||||||||| ||||||||||||||||||| ||| | |||||| |||||||||||    
T  4460476 tagactattttcatgtttcgaaatccttgtctaaattcacttgttccaatattaaaacttcatcttttgatccatcgcttaatatttgtgat 4460567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 30063643 - 30063734
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| |||| |||| |||||||||| |||||| ||||||||| |||| |||| ||||| ||| ||| ||||||||||||||||||||    
T  30063643 tagactattttcatttttcgcaatccttgtctaatttcacttgttccaatatcaaaatttcatattttgatccttcgcttgatatttgtgat 30063734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 46274503 - 46274412
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||| |||||||||| || ||| ||||||||| ||||||||| |||||||||||||   |||||| |||||||||||    
T  46274503 tagactattttcatgtttcgcaatccttgtctatattcacttgttccaatattaaaatttcatctttcgatcgatcgcttaatatttgtgat 46274412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 1614322 - 1614252
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgat 77  Q
    |||| |||| ||||||||| |||||||||| || ||| ||||||||| |||||||||||||||||||||||    
T  1614322 tagactattttcatgtttcgcaatccttgtctatattcacttgttccaatattaaaacttcatctttcgat 1614252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 4090961 - 4090863
Alignment:
Q  155 attcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||| |||||| ||| || ||||| |||||| |||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  4090961 attcattataaaaacggtgaaattagattataaagtacatttatataaaactagggtttatggtttggtttgattaggattacgtcattagacttatcc 4090863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 14925753 - 14925695
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggatta 235  Q
    |||||||||||||| ||||| |||| |||||||||| ||||||||||||||||| ||||    
T  14925753 tagattagaaaatatatttaaataagattagggttctaggcttggtttgataggaatta 14925695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 15349219 - 15349161
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggatta 235  Q
    |||||||||||||| ||||| |||| |||||||||| ||||||||||||||||| ||||    
T  15349219 tagattagaaaatatatttaaataagattagggttctaggcttggtttgataggaatta 15349161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 38877811 - 38877715
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaa 104  Q
    |||| |||||| ||||||| |||||||||| |||||| ||||||||| |||| ||| |||||| ||| ||| |||| ||||||||||||||| |||||    
T  38877811 tagactattctaatgtttcgcaatccttgtctaatttcacttgttccaatatcaaa-cttcatttttggatccttcacttgatatttgtgatgatgaa 38877715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 1864545 - 1864477
Alignment:
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||| |||| |||||||||| ||||||||||| ||||  ||||  |||||||||||||||    
T  1864545 gaaaatagatttaaataagattagggttctaggcttggttttatagaaattaactcattagactcatcc 1864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 11483537 - 11483628
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||  |||||||||| ||| || ||| ||||| ||||||||||||||||||||||| | |||| | |||||||||||    
T  11483537 tagactattttcatgttttgcaatccttgtctaaattcactcgttccaatattaaaacttcatctttcgatccatcgcctaatatttgtgat 11483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 16896949 - 16897035
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| |||| |||||||||| ||  || ||||||||| ||||||||||||||||||||||| | |||||  |||||||||||    
T  16896949 tattttcatatttcgcaatccttgtctatgttcacttgttccaatattaaaacttcatctttcgatccatcgctgaatatttgtgat 16897035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 8521998 - 8522085
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  ||||||||||||||||||  | ||||||||||||  |||||| ||||||||||| ||||    
T  8521998 aaaacggtgaatttagattagaaactagggttacataaaattagggtt-aaagcttggtttgattaggattatgtcattagacttatcc 8522085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 17946963 - 17946880
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||||||| | |||||||||| |||  ||||||||||||| ||||  | ||||||||||||  |||||| |||||||||||    
T  17946963 aaaacggtgaatttagattagaaattagggttacataaaattaaggtttaaagcttggtttgattaggattatgtcattagact 17946880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 1462903 - 1462862
Alignment:
Q  57 attaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    ||||||||||||||||||||| | |||||| |||||||||||    
T  1462903 attaaaacttcatctttcgatccatcgcttaatatttgtgat 1462862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 14925881 - 14925825
Alignment:
Q  47 ttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaa 104  Q
    ||||||| |||||||| |||||||||||||| ||||| |||||||||| ||| |||||    
T  14925881 ttgttccaatattaaa-cttcatctttcgatccttcgtttgatatttgagatgatgaa 14925825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 15349347 - 15349291
Alignment:
Q  47 ttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaa 104  Q
    ||||||| |||||||| |||||||||||||| ||||| |||||||||| ||| |||||    
T  15349347 ttgttccaatattaaa-cttcatctttcgatccttcgtttgatatttgagatgatgaa 15349291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 252
Target Start/End: Complemental strand, 16487644 - 16487533
Alignment:
Q  141 tttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtc 239  Q
    ||||||| | ||||||||||  |||||||||| || | |||||||||| |||  |||  ||| |||||||||  ||||||||||||||  |||||| |||    
T  16487644 tttgataatggttaattcatg-taaaaacggtaaatttagattagaaactagggttatgtaagattagggttgaaggcttggtttgattaggattatgtc 16487546  T
Q  240 attagactcatcc 252  Q
    |||||||| ||||    
T  16487545 attagacttatcc 16487533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 4e-90; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 19012691 - 19012938
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||| |||| || ||||| ||||||||| | |||||| ||||||||||||||| |||    
T  19012691 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaatacttcttctttcgatgcctcgctttgatatttgtgattatcaat 19012790  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  19012791 taacaagtactaaccctccgctgtcgcattatgaatttgatacttgttaattcattataaaaacgatgaaattagattagaaaatagatttacataaaat 19012890  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  19012891 tagggttcgaggcttggtttgataggaattaggtcattagactcatcc 19012938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 20852533 - 20852289
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| |||||||||||||||||||| |||||| |||| |||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  20852533 tagactattttcatgtttcacaatccttgtctaatttcacttcttccaatatcaaaacttcatctttcgatccttcacttgatatttgtgattatgaatt 20852434  T
Q  107 cacaagtactaacccttcg-ctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatt 205  Q
     |||| || ||| | |||| || ||  |  ||  |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20852433 aacaactattaaac-ttcgtctttcagtccatcgatta-atacttgttaattcattataaaaacggtgaaatagatttgaaaatagatttacataaaatt 20852336  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20852335 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 20852289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 19124028 - 19124253
Alignment:
Q  28 caatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaattcacaagtactaacccttcg 125  Q
    |||||||||| |||||| ||||||||| |||| |||||||| ||||||||| |||| ||| ||||||| |  | ||||||| ||||||||||||||| ||    
T  19124028 caatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcactttgatatttattgtgatgaattaacaagtactaaccctccg 19124127  T
Q  126 ctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggttt 224  Q
     |||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  19124128 ttgtcgcattatgagtttgatacttgttaattcattataaaaacggtggaattagattagaaaataaatttacataaaattagggttcgagacttggttt 19124227  T
Q  225 gatagggattaggtcattagactcat 250  Q
    |||  |||||||||||||||||||||    
T  19124228 gattaggattaggtcattagactcat 19124253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 24322203 - 24321959
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| |||||| |||| |||| |||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  24322203 tagactattttcatgtttcgcaatccttgtctaatttcacttattccaatatcaaaacttcatctttcgatcattcgcttgatatttgtgattatgaatt 24322104  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||  |  ||  |||  |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| ||     
T  24322103 aacaactattaaacttcacctttcagtccatcgatta-atacttgttaattcattataaaaatggcgaaataaattagaaaatagatttacataaagttc 24322005  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||    
T  24322004 gggttcaaggcttggtttgatatggattaggtcattagactcatcc 24321959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 24371128 - 24371365
Alignment:
Q  14 attctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaag 112  Q
    ||||||||||||| |||||||||| |||||| ||||||||| |||| ||| |||||||||||||| |||||||||||||||||||| ||||| | ||||     
T  24371128 attctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaa-cttcatctttcgatccttcgcttgatatttgtgatgatgaaataacaac 24371226  T
Q  113 tactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttc 212  Q
    || ||| | |   || ||| |   |  |||  |||||||||| | ||||| |||||| |||||||| |||||||||||||||||||||| |||| |||||    
T  24371227 tattaaacttcacctttcggtccttcgatta-atacttgttattccattagaaaaacagtgaaatatattagaaaatagatttacataagattaaggttc 24371325  T
Q  213 gaggcttggtttgatagggattaggtcattagactcatcc 252  Q
     |||||||||||||||||||||| ||||||||||||||||    
T  24371326 taggcttggtttgatagggattacgtcattagactcatcc 24371365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 112 - 247
Target Start/End: Complemental strand, 15584140 - 15584004
Alignment:
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggt 210  Q
    ||||||||||| || ||||||||||||| |||||||||||| |||||||||||| ||| ||||||| |||||||||| |||||||| |||||||||||||    
T  15584140 gtactaaccctccgttgtcgctttatgagtttgatacttgtaaattcattataacaactgtgaaattagattagaaagtagatttatataaaattagggt 15584041  T
Q  211 tcgaggcttggtttgatagggattaggtcattagact 247  Q
    || ||||||||||||||  |||||| |||||||||||    
T  15584040 tcaaggcttggtttgattaggattatgtcattagact 15584004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 23256705 - 23256942
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaa 111  Q
    |||||||||||||| |||||||||| |||||| ||||||||| |||| ||||||||||||||| ||  ||| ||||||||||||||| |   | | ||||    
T  23256705 tattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcaatcgttcacttgatatttgtgatgaatcaataacaa 23256804  T
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggtt 211  Q
     || ||| | |   || ||| |  ||  |||  ||| |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23256805 atattaaacttcatctttcgatccatcgatta-atatttgtta-ttgattataagaacggtgaaatagattagaaaatagatttacataaaattagggtt 23256902  T
Q  212 cgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  23256903 cgaggcttgggttgata-ggattaggtcattagactcatcc 23256942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 24366062 - 24366230
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| |||||||||| |||  | ||||||||| |||| || |||||||||||||||||||||||||||| || ||||    
T  24366062 ttgatatttgtgatgatgaattaacaaatactaaccctccgcgtttgctttatgagtttgttatttgttaattcattataaaaacggtgaaattatatta 24366161  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||||||| ||||||||| ||||   || ||||||||||  |||||| ||||||||||| ||||    
T  24366162 gaaagtagatttatataaaattaaggtttatggtttggtttgattaggattacgtcattagacttatcc 24366230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 24609901 - 24609994
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||| ||||    
T  24609901 attataagaacggtgaaatagattagaaaatagatttacataaaattagggttcaaggcttggtttgattaggattaggtcattggacttatcc 24609994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 23698566 - 23698734
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| ||   ||||||||||| |||| || |||||||||||||||||||||  ||||| |||||||    
T  23698566 ttgatatttgagatgatgaattaacaaatactaaccctccgtgttcgctttatgagtttggtatttgttaattcattataaaaacaatgaaattagatta 23698665  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||| ||||||||||||||    | ||||||||||  |||||| ||||||||||| ||||    
T  23698666 gaaaatagatttatataaaattagggtttatagtttggtttgattaggattacgtcattagacttatcc 23698734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 247
Target Start/End: Original strand, 25858346 - 25858509
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| |||||||||| | |  ||||||||||| |||| || ||||||||| |||||||||||||||||| |||||||    
T  25858346 ttgatatttgtgatgatgaattaacaaatactaaccctccacgttcgctttatgagtttggtatttgttaatttattataaaaacggtgaaattagatta 25858445  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    |||| |||||||| |||| |||||||||   || ||| ||||||  |||||| |||||||||||    
T  25858446 gaaagtagatttatataatattagggtttatggtttgatttgattaggattacgtcattagact 25858509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 13004721 - 13004649
Alignment:
Q  180 attagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  13004721 attagaaaatagatttacataaaattagggttctaggcttggtttgataggaattaggtcattagactcatcc 13004649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 41653370 - 41653538
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| |||||||||| ||   ||||||||||| |||  || || ||||||||||||||||||||||||| |||||||    
T  41653370 ttgatatttgtgatgatgaattaacaaatactaaccctccgtgctcgctttatgagttttgtatttattaattcattataaaaacggtgaaattagatta 41653469  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
     ||| |||||||| ||||||||||||||   || ||||||||||  ||||||  |||||||||| ||||    
T  41653470 caaagtagatttatataaaattagggtttatggtttggtttgattaggattacatcattagacttatcc 41653538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 30948937 - 30949182
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||| | ||| |||||| |||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  30948937 tagactattctcatgttacgcaa-ccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgatgatgaatt 30949035  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     |||| |||| ||||||   |  |||| || | |  ||  || ||  ||||||||||||||||  |||||| ||||||||||| |||||||| ||||||     
T  30949036 aacaattactaaaccctcaacgttcgc-ttcttagcttagtaattactaattcattataaaaatagtgaaattagattagaaagtagatttatataaaac 30949134  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  30949135 tagggtttatggtttggtttgattaggattacgtcattagacttatcc 30949182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 31590365 - 31590439
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31590365 tagattagaaaatagatctacataaaattagggttctaggcttggtttgata-ggattaggtcattagactcatcc 31590439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 36129950 - 36130025
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||| ||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  36129950 tagattagaaaatatatttacataaaattagggtttttggcttggtttgataggaattaggtcattagactcatcc 36130025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 21344315 - 21344408
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||| |||  |||| |||||||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  21344315 attataaaaacggtgaaatagattagaaattagggttacctaaaattagggtttaaggcttggtttgattaggattacgtcattagacttatcc 21344408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 29951866 - 29951787
Alignment:
Q  177 tagattagaaaatagatttac----ataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||    |||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  29951866 tagattagaaaatagatttacttaaataaaattagggttcttagcttggtttgatagggattaggtcattagactcatcc 29951787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 16440181 - 16440041
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||| ||||||| |||||||||| |||||| ||||||||  |||| || ||||| ||||| ||| |||||||| |||||| ||||| ||||||    
T  16440181 tagactattctaatgtttcgcaatccttgtctaatttcacttgttcaaatatcaatacttcttcttttgatgcttcgctttgatattcgtgatgatgaat 16440082  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgat 146  Q
    | |||||||||| || | || ||||||||||| ||||||||    
T  16440081 taacaagtactagccatccgttgtcgctttataaatttgat 16440041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 22328822 - 22328654
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| || |||| |||| |||||||||| || ||| || |||| | |||  || ||||||||||||||||||||| || ||| ||||||     
T  22328822 ttgatatttgtgatgataaattaacaaatactaaccctccgttgttgcattataagtttagtatttgttaattcattataaaaacagtaaaattagattt 22328723  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||||||| ||||||||||||||    | ||||||||||  |||| | ||||||||||| ||||    
T  22328722 gaaagtagatttatataaaattagggttttttgtttggtttgattaggataacgtcattagacttatcc 22328654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 23340895 - 23340728
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||| ||| ||||||| | || |||||||||| | || ||| ||    ||||||||| ||||||||||||  ||||| ||||||| | ||||||    
T  23340895 ttgatatttgagatgatgaattaataattactaaccctccactttcgattatacaatttgataattgttaattcatgttaaaa-cggtgaatttagatta 23340797  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||  ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  23340796 gaaattagggttacataaaattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 23340728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 23704664 - 23704593
Alignment:
Q  28 caatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||||||||| || ||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  23704664 caatccttgtctatattcacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgat 23704593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 24177376 - 24177467
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| |||| |||| | |||||||| || ||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  24177376 tagactattttcatatttcgctatccttgtctatattcacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgat 24177467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 25592972 - 25593047
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||| |||| |||  ||||  ||||||||||||||||| |||| ||||||||||||||||    
T  25592972 tagattagaaaatagatttaaataagattgcggttttaggcttggtttgataggaattaagtcattagactcatcc 25593047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 21243 - 21336
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| ||||||||||||||||||||| ||   ||||||||||||||||||  ||||||||||||||  | |||| || |||||||| ||||    
T  21243 attataagaacggtgaaatagattagaaattaaggttacataaaattagggtttaaggcttggtttgattagcattacgttattagacttatcc 21336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 22578195 - 22578250
Alignment:
Q  196 acataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  22578195 acataaaattagggttttaggcttggtttgata-ggattaggtcattagactcatcc 22578250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 29577166 - 29577272
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||| |||||||||||||||||||||  |   |||||||||||||||| |  | ||||||||||||  |||||| ||||||||    
T  29577166 atacttgtta-ttgattataagaacggtgaaatagattagaaatcaaggttacataaaattagggattaaagcttggtttgattaggattatgtcattag 29577264  T
Q  245 actcatcc 252  Q
    ||| ||||    
T  29577265 acttatcc 29577272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 29577067 - 29577120
Alignment:
Q  45 acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    ||||||||| |||||||||||||||||||||||  ||||||| |||||||||||    
T  29577067 acttgttccaatattaaaacttcatctttcgatcattcgcttaatatttgtgat 29577120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 21087 - 21179
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccga-tattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||| |||||||||| || ||| ||||||||| | ||||||||||||||||||| || | |||||| |||||||||||    
T  21087 tagactattttcatgtttcgcaatccttgtctatattcacttgttccaaatattaaaacttcatctttcaatccatcgcttaatatttgtgat 21179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 539434 - 539384
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgat 227  Q
    ||||||||||| |||||||| ||||||||||||||| || |||||||||||    
T  539434 tagattagaaagtagatttatataaaattagggttcaagacttggtttgat 539384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 23613824 - 23613977
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| ||| || ||||||||| |||| |||||||   |||||| |   |   |||||||||| ||| |||||||    
T  23613824 tagactattttcatgtttctcaatccttgtctaaattcacttgttccaatatcaaaactttcactttcgcttgatgaattgatatttgagatgatgaatt 23613923  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcat 160  Q
     |||| |||||||||| | || |||||| |||| |||| || ||||||||||||    
T  23613924 aacaattactaaccctccactttcgcttcatgagtttggtaattgttaattcat 23613977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 23704534 - 23704441
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| ||| |||||||| |||||||| |||  ||||||||||||||||||    ||||||||||||  | |||| ||||||||||| ||||    
T  23704534 attataagaacagtgaaataaattagaaattagggttacataaaattagggtttagagcttggtttgattagtattatgtcattagacttatcc 23704441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 28496533 - 28496621
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  ||| ||||||||||||||  | ||||||||||||  |||||| ||||||||||| ||||    
T  28496533 aaaacggtgaatttagattagaaattagggttatataaaattagggtttaaagcttggtttgattaggattatgtcattagacttatcc 28496621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 24609751 - 24609842
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||| ||||| |||| ||| || || |||||| ||||||||||||||||||| ||| | |||||| |||||| ||||    
T  24609751 tagactattttcatgtttcgcaatcattgtctaaattcacctgttccaatattaaaacttcatcttttgatccatcgcttaatatttttgat 24609842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 24018448 - 24018502
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagg 230  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||  ||||||||    
T  24018448 tagattagaaaaatagattcacataaaattagggttctaggcttgacttgatagg 24018502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 27745314 - 27745227
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | ||||||||||||||  |||||||| |||||||||  |  |||||||||||  |||||| ||||||||||| ||||    
T  27745314 aaaacggtgaatttagattagaaaatagggttacataagattagggtt-aaaacttggtttgattaggattatgtcattagacttatcc 27745227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 22171189 - 22170947
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaattcaca 110  Q
    |||||| ||||||| |||||||||| ||| || ||||||||| |||| |||||||| ||||||||| |||||||| |||||||| |||||| |||| |||    
T  22171189 tattcttatgtttcgcaatccttgtctaaattcacttgttccaatatcaaaacttcttctttcgatgcttcgctttgatatttgagattataaattaaca 22171090  T
Q  111 agtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaa-atagattagaaaatagatttacataaaattaggg 209  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  22171089 agtactaatcctccgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaatttagattagaaaatagatttacataaaattaggg 22170990  T
Q  210 ttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  22170989 ttcgaggcttggtttgatagggattaattcattagactcatcc 22170947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 12410934 - 12410687
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||  |||||||||| |||||| ||||||||| |||| |||||||| || |||||| |||| ||| |||||||||||| ||||||    
T  12410934 tagactattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaacttcttccttcgatgcttcactttgatatttgtgatgatgaat 12410835  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  12410834 taacaagtactaaccctccgttgtcgctttatgagtttgatacttgttaattcattataaaaacggtgaaattagattagaaagtagatttacataaaat 12410735  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    
T  12410734 tagggttcgaggcttggtttgattaggattaggtcattagactcatcc 12410687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 16677486 - 16677239
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||  ||||| |||| ||| || ||||||||| |||| |||||||| ||||||||| ||||| || |||||||||||||||||||    
T  16677486 tagactattctcatgttttgcaatctttgtctaaattcacttgttccaatatcaaaacttcttctttcgatgcttcgttttgatatttgtgattatgaat 16677387  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaa-atagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||| ||||||  || |||||||||||||||||||||||||    
T  16677386 taacaagtactaaccctccgttgccgctttatgaatttggtacttgttaattcattataaaaatggtgaagttatattagaaaatagatttacataaaat 16677287  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||  || ||||||||||||||||||||  |||||||||||||||    
T  16677286 tagggtaagatgcttggtttgatagggattatatcattagactcatcc 16677239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 20738684 - 20738516
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    ||||||||| |||| ||||||| |||| |||||||||| |||| ||||||||||| |||| || |||||||||||||||||||||||||||| |||||||    
T  20738684 ttgatatttatgatgatgaattaacaaatactaaccctccgctatcgctttatgagtttggtatttgttaattcattataaaaacggtgaaattagatta 20738585  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| ||||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20738584 gaaagtagatttatgtaaaattagggttcgaggcttggtttgattaggattaggtcattagactcatcc 20738516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 24166669 - 24166425
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||| |||| ||| |||||||||||||| |||||||||||||||||||| ||||| |    
T  24166669 tagattattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaatcttcatctttcgatccttcgcttgatatttgtgatgatgaaat 24166570  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| |   |  |||  |||||||||| | ||||| |||| ||||||| || |||||||||||||||||||||| ||||    
T  24166569 aacaactattaaacttcacctttcggtcattcgatta-atacttgttattccattagaaaagcggtgaattaaattagaaaatagatttacataagatta 24166471  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  24166470 gggttccaggcttggtttgatagggattaggtcattcgactcatcc 24166425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 23029250 - 23029493
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| || |||||| |||| ||| |||||||||||||| |||||||||||||||||||| ||||| |    
T  23029250 tagactattctcatgtttcgcaatccttgtctaatttcacctgttccaatatcaaa-cttcatctttcgatccttcgcttgatatttgtgatgatgaaat 23029348  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||  | |   || ||| |   |  |||  |||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||| ||||    
T  23029349 aacaactattagacttcatctttcggtccttcgatta-atacttgttatttcattagaaaaacaatgaaatagattagaaaatagatttacataagatta 23029447  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||||    
T  23029448 gggttctaggcttggtttaatagggattaggtcattagagtcatcc 23029493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 24165661 - 24165415
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||| |||||| |||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  24165661 tagactattctcatgtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgatgatgaatt 24165562  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     |||| || | ||||||  ||  | || || | |  || | | ||| |||||||||||||||||||||||| ||||||||||| |||||||| ||||||     
T  24165561 aacaattattaaaccctctgcgttagc-ttcttagcttaacaattgctaattcattataaaaacggtgaaattagattagaaagtagatttatataaaac 24165463  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  24165462 tagggtttatggtttggtttgattaggattacgtcattagacttatcc 24165415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 2953339 - 2953460
Alignment:
Q  132 ctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagg 230  Q
    |||||||| |||| || |||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||| ||||||||||||||  |    
T  2953339 ctttatgagtttggtatttgttaattcattataaaaatggtgaaattagattagaaagtagatttatataaaattagggttcaaggcttggtttgattag 2953438  T
Q  231 gattaggtcattagactcatcc 252  Q
    ||||| ||||||||||||||||    
T  2953439 gattatgtcattagactcatcc 2953460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 23114528 - 23114420
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcatta 243  Q
    |||||||||| |  |||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23114528 atacttgttattcaattagaaaaacgatgaaattagattagaaaatatatttacataaaattagggttctaggcttggtttgatagggattaggtcatta 23114429  T
Q  244 gactcatcc 252  Q
    |||||||||    
T  23114428 gactcatcc 23114420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 247
Target Start/End: Original strand, 31757889 - 31758037
Alignment:
Q  100 atgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttaca 198  Q
    ||||||| |||| ||| |||||| || |||||| |||||| ||||  | |||||||||||| || ||||||||||||| |||||||||| |||||||| |    
T  31757889 atgaattaacaaatacgaaccctccgttgtcgcattatgagtttggcatttgttaattcatcatcaaaacggtgaaattagattagaaagtagatttata 31757988  T
Q  199 taaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    |||||||||||||   |||||||||||||  |||||| |||||||||||    
T  31757989 taaaattagggtttatggcttggtttgattaggattatgtcattagact 31758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 20103729 - 20103828
Alignment:
Q  129 tcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattagggttcgaggcttggtttgat 227  Q
    |||||| |||| ||||||| ||||||||||||||||| |||||||||| ||||||||||| || ||||| ||||||||||||||| | ||||||||||||    
T  20103729 tcgcttcatgagtttgatatttgttaattcattataataacggtgaaattagattagaaagtaaatttatataaaattagggttcaatgcttggtttgat 20103828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 2953062 - 2953195
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgc-ttgatatttgtgattatgaat 105  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||| |||| |||||||| ||||||| | |||||| |||||||||||||| ||||||    
T  2953062 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcggtgcttcgctttgatatttgtgatgatgaat 2953161  T
Q  106 tcacaagtactaacccttcgctgtcgctttatga 139  Q
    | | || ||||||||||    |||||||||||||    
T  2953162 tgataaatactaaccctctcttgtcgctttatga 2953195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 18091769 - 18091841
Alignment:
Q  180 attagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  18091769 attagaaaataaatttacataaaattaggattctaggcttggtttgagaggaattaggtcattagactcatcc 18091841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 20169232 - 20169399
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||  |||| ||||||    ||||| ||| ||||||||||||  ||||| ||||||| | ||||||    
T  20169232 ttgatatttgagatgatgaattaacaattactaaccccccgctttcgcttctacaattttataattgttaattcatgttaaaa-cggtgaatttagatta 20169330  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||  ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  20169331 gaaattagggttacataaaattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 20169399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 20724530 - 20724621
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||| ||||| |||| || ||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  20724530 tagactattttcatgtttcgcaatcattgtctatattaacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgat 20724621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 19222150 - 19222075
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||| |||| ||| |||||| |||||| ||| |||||| |||| ||||||||||||||||    
T  19222150 tagattagaaaatagatttaaataagattcgggttctaggctttgttagataggaattaagtcattagactcatcc 19222075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 22948839 - 22948733
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||| ||||||||||||||||||||| |||  |||||||||||| |||||  | |||||||||||   |||||| ||||||||    
T  22948839 atacttgtta-ttgattataagaacggtgaaatagattagaaattagggttacataaaatttgggtttaaagcttggtttgaataggattatgtcattag 22948741  T
Q  245 actcatcc 252  Q
    ||| ||||    
T  22948740 acttatcc 22948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 31414884 - 31414810
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt 86  Q
    |||||||||||||  ||||||||||||||||| ||||||||| |||| |||||||| ||||||||| ||||||||    
T  31414884 tattctcatgttttgcaatccttgtgtaatttcacttgttccaatatcaaaacttcttctttcgatgcttcgctt 31414810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 20724667 - 20724773
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||| || |||||||||||||||||| |||  ||||||||||||||||||  |  |||||||||||  |||| | ||||||||    
T  20724667 atacttgtta-ttgattataagaatggtgaaatagattagaaagtagggttacataaaattagggtttaaaacttggtttgattaggataatgtcattag 20724765  T
Q  245 actcatcc 252  Q
    ||| ||||    
T  20724766 acttatcc 20724773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 22948938 - 22948885
Alignment:
Q  45 acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    ||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||    
T  22948938 acttgttccaatattaaaacttcatctttcgatccttctcttaatatttgtgat 22948885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 17408434 - 17408505
Alignment:
Q  28 caatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||||||||| || ||| |||| |||| |||||||||| |||||||||||| |||||||| |||||||||||    
T  17408434 caatccttgtctatattcacttattccaatattaaaacctcatctttcgatccttcgcttaatatttgtgat 17408505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 17408551 - 17408657
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||| || ||||||||| |||||||| ||   ||||||||||||||||||  | ||| ||||||||  |||||| ||||||||    
T  17408551 atacttgtta-ttgattataagaatggtgaaataaattagaaattaaggttacataaaattagggtttaaagctgggtttgattaggattatgtcattag 17408649  T
Q  245 actcatcc 252  Q
    ||| ||||    
T  17408650 acttatcc 17408657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 23114664 - 23114568
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaa 104  Q
    |||| ||||||||||||||  ||||||||| |||||| | ||||||| ||||| |||||||||| ||| ||  ||||||||||||||| ||| |||||    
T  23114664 tagactattctcatgtttcgtaatccttgtctaatttcatttgttccaatatt-aaacttcatcattctatcattcgcttgatatttgagatgatgaa 23114568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 252
Target Start/End: Complemental strand, 21382551 - 21382440
Alignment:
Q  141 tttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtc 239  Q
    ||||||| ||||||||||||  ||||| ||||||| | |||||||||| |||  |||||||| |||| ||||  |||||| |||||||  |||||| |||    
T  21382551 tttgataattgttaattcatgttaaaa-cggtgaatttagattagaaactagggttacataagattacggtttaaggcttagtttgattaggattatgtc 21382453  T
Q  240 attagactcatcc 252  Q
    |||||||| ||||    
T  21382452 attagacttatcc 21382440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 22942727 - 22942675
Alignment:
Q  46 cttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||||||| ||||||||||||||||||||||| |||| ||| |||||| ||||    
T  22942727 cttgttccaatattaaaacttcatctttcgatccttcacttaatatttttgat 22942675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 23435574 - 23435486
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  |||||||| ||||| |||  ||||||||||||||  |||||| ||||||||||| ||||    
T  23435574 aaaacggtgaatttagattagaaactagggttacataagattagcgtttaaggcttggtttgattaggattatgtcattagacttatcc 23435486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 23446941 - 23446853
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  |||||||| ||||| |||  ||||||||||||||  |||||| ||||||||||| ||||    
T  23446941 aaaacggtgaatttagattagaaactagggttacataagattagcgtttaaggcttggtttgattaggattatgtcattagacttatcc 23446853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 22942616 - 22942523
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| |||  |||||||||||||||| |||  || |||||||||||||||  | | |||||||||   |||||| ||||||||||| ||||    
T  22942616 attataagaacactgaaatagattagaaattagggttgcataaaattagggtttaaagtttggtttgactaggattatgtcattagacttatcc 22942523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 20915810 - 20915882
Alignment:
Q  180 attagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||| |||  ||||||||||||||||||  | ||||||||||||  |||||  ||||||||||| ||||    
T  20915810 attagaaattagggttacataaaattagggtttaaagcttggtttgattaggattttgtcattagacttatcc 20915882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 34222978 - 34223046
Alignment:
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||||||| ||||||||||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  34222978 gaaattagatttatataaaattagggtttatggtttggtttgattaggattacgtcattagacttatcc 34223046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 5675877 - 5675630
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||  |||| ||||| | |||| ||||||| | |||| |||||||| ||||||| |||||||||||||||||||||||||||||     
T  5675877 tagactattctcatgttttgcaatacttgtttgatttcacttgtttcaatatcaaaacttcttctttcggtacttcgcttgatatttgtgattatgaata 5675778  T
Q  107 cacaagtactaacccttcgctgtcg---ctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaa 203  Q
     ||||||||||||||| | |||| |   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5675777 aacaagtactaaccctcctctgttgtcactttatgaatttgatacttgttaattcattataaaaacggtgaa-tagattagaaaatagatttacataaaa 5675679  T
Q  204 ttagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5675678 ttagggttcgaggcttggtttgatagggattaggtcattagactcatcc 5675630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 38652565 - 38652320
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| ||||| |||||||| |||||||||| |||||| ||||||| | |||| |||||||| ||||||||| |||| ||| |||||||||||| ||||||    
T  38652565 tagactattcccatgtttcgcaatccttgtctaatttcacttgtttcaatatcaaaacttcttctttcgatgcttcactttgatatttgtgatgatgaat 38652466  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | |||||||| |||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  38652465 taacaagtaccaaccctccgttgtcgctttatgagtttgatacttgttaattcattataaaaacggtgaaattagattagaaaatag-tttacataaaat 38652367  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    || |||||||||||| |||||||   ||||||||||| ||||||||||    
T  38652366 ta-ggttcgaggcttagtttgattatgattaggtcatcagactcatcc 38652320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 8 - 227
Target Start/End: Complemental strand, 9192645 - 9192423
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| ||||||||||||||||||||| ||| |||||| ||||||||  |||| |||||||  |||||| || |||| ||| |||||||||||| ||||||    
T  9192645 tagactattctcatgtttcacaatccatgtctaatttcacttgttctaatatcaaaactttttctttcaatgcttcactttgatatttgtgatgatgaat 9192546  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | |||| |||||||| | || ||||||||||||| |||| || ||||||||||||||||||||| || ||| ||||||||||| |||||||| |||||||    
T  9192545 taacaaatactaaccgtccgttgtcgctttatgagtttggtatttgttaattcattataaaaacagtaaaattagattagaaagtagatttatataaaat 9192446  T
Q  205 tagggttcgaggcttggtttgat 227  Q
     |||||||||||| |||||||||    
T  9192445 gagggttcgaggcatggtttgat 9192423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 5513458 - 5513563
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  5513458 atacttgttgattcattataaaaacgatgaaatagatcagaaaatatatttacataaaattagggttcgagacttggtttgatagggattagctcattag 5513557  T
Q  245 actcat 250  Q
    ||||||    
T  5513558 actcat 5513563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 12345638 - 12345880
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| |||| | ||||||| | |||| |||||||||||||| ||| ||||||||||||||||||||||   | |    
T  12345638 tagactattttcatgtttctcaatccttgtctaatgtcacttgttgcaatatcaaaacttcatcttttgatccttcgcttgatatttgtgattaatcaat 12345737  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
      ||| || ||| | |   || ||| |  ||  |||  |||||||||| || ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  12345738 agcaactattaaacttcatctttcgatccatcgatta-atacttgtta-ttgattataagaacggtgaattagattagaaaatagatttacataaaatta 12345835  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatc 251  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  12345836 gggttcgaggcttggtttaatagcgattaggtcattagactcatc 12345880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 12807862 - 12808108
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||| ||||| ||| |||||| |||||| ||||||||| ||||||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  12807862 tagactattctcaagtttcgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatccttcgattaatatttgtgatgatgaatt 12807961  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     |||| |||| |||||| |||  |||| || | |  ||  || ||| |||||||||||||||||||||||| ||||||||||| |||||||| ||||||     
T  12807962 aacaattactaaaccctccgcgttcgc-ttcttagcttagtaattgctaattcattataaaaacggtgaaattagattagaaagtagatttatataaaac 12808060  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  12808061 tagggtttatggtttggtttgattaggattacgtcattagacttatcc 12808108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 23793429 - 23793536
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| |  |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  23793429 atacttgttattctattagaaaaacggtgaattagattagaaaatagatttacataagattagggttcgaggcttggattgatagggattaggtcattag 23793528  T
Q  245 actcatcc 252  Q
    ||||||||    
T  23793529 actcatcc 23793536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 11922275 - 11922368
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11922275 attataagaacggtaaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgattaggattaggtcattagactcatcc 11922368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 17169188 - 17168977
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaa 111  Q
    |||||||||||||| |||||||||| ||| || |||| |||| |||| ||| |||||||||||||| |||||||||||||||||||| ||||| | ||||    
T  17169188 tattctcatgtttcgcaatccttgtctaaattcacttattccaatatcaaa-cttcatctttcgatccttcgcttgatatttgtgatgatgaaataacaa 17169090  T
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggtt 211  Q
     || ||| | |   || ||| |   |  |||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17169089 ctattaagcttcacctttcggtccttcgatta-atacttgttatttcattataaaaacggtgaaatagattagaaaatagatttacataagattagggtt 17168991  T
Q  212 cgaggcttggtttg 225  Q
    | ||||||||||||    
T  17168990 ctaggcttggtttg 17168977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 17174748 - 17174537
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaa 111  Q
    |||||||||||||| |||||||||| ||| || |||| |||| |||| ||| |||||||||||||| |||||||||||||||||||| ||||| | ||||    
T  17174748 tattctcatgtttcgcaatccttgtctaaattcacttattccaatatcaaa-cttcatctttcgatccttcgcttgatatttgtgatgatgaaataacaa 17174650  T
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggtt 211  Q
     || ||| | |   || ||| |   |  |||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17174649 ctattaagcttcacctttcggtccttcgatta-atacttgttatttcattataaaaacggtgaaatagattagaaaatagatttacataagattagggtt 17174551  T
Q  212 cgaggcttggtttg 225  Q
    | ||||||||||||    
T  17174550 ctaggcttggtttg 17174537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 192
Target Start/End: Complemental strand, 25190592 - 25190407
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||| || | |||||||||||||| |||  |||||||||||||||||||||||||||    
T  25190592 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatgtcaaaacttcatcttttgatctttcgcttgatatttgtgattatgaatt 25190493  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaataga 192  Q
     |||| ||  |||  |   || | | |||||  |||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  25190492 aacaactatcaactatcgccttttggtttattgatttaatacttgttaattcattataaaaacggtaaaatagattagaaaataga 25190407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 3771949 - 3772069
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| |||||||||| |||  ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  3771949 ttgatatttgtgatgatgaattaacaaatactaaccctccgcgttcgctttatgagtttgatatttgttaattcattataaaaacggtgaaattagatta 3772048  T
Q  184 gaaaatagatttacataaaat 204  Q
    ||||||||||||| |||||||    
T  3772049 gaaaatagatttatataaaat 3772069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 33330711 - 33330921
Alignment:
Q  28 caatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaagtactaacccttcgc 126  Q
    |||||||||| |||||| ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||| |||  ||  ||||||   |    
T  33330711 caatccttgtctaatttcacttgttccaatatcaaaatttcatctttcgatacttcgcttgatatttgtgattatgaattaacagctatcaaccctcgcc 33330810  T
Q  127 tgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttga 226  Q
    | ||| |||||  |||| ||||||||| ||||||||| |||||||||            ||||||||||||||||||||||||||||| |||||||||||    
T  33330811 tttcggtttattgatttaatacttgttgattcattattaaaacggtg------------aaatagatttacataaaattagggttcgaagcttggtttga 33330898  T
Q  227 tagggattaggtcattagactcat 250  Q
    | ||| |||| |||||| ||||||    
T  33330899 t-ggggttagttcattaaactcat 33330921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 252
Target Start/End: Original strand, 9717496 - 9717687
Alignment:
Q  60 aaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattca 159  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| | |||| || ||| | |   || ||| |   |  |||  |||||||||| | ||    
T  9717496 aaaacttcatctttcgatacttcacttgatatttgtgatgatgaaataacaactattaaacttcacctttcgttccttcgatta-atacttgttattcca 9717594  T
Q  160 ttataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    | | |||||||||||| ||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  9717595 tcagaaaaacggtgaattagattagaaaattgatttacataagattagagtccgaggcttggtttgatagggattagatcattagactcatcc 9717687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 8561999 - 8562125
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||| ||||||||| |||||||||| |||||| ||||||||| |||| |||||||| ||||||||| |||||||| |||||||||||| ||||||    
T  8561999 tagactattatcatgtttcgcaatccttgtctaatttcacttgttccaatataaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaat 8562098  T
Q  106 tcacaagtactaacccttcgctgtcgc 132  Q
    | ||||||||||||||| || ||||||    
T  8562099 taacaagtactaaccctccgttgtcgc 8562125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 13510674 - 13510746
Alignment:
Q  180 attagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  13510674 attagaaaatagatttacataaaattagggttctaggcttggtttgatagggattaggtcatcagattcatcc 13510746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 18749775 - 18749702
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcat 250  Q
    |||||||||||||| |||||||||||||||||||||  || ||||||||||||| |||||||||||||||||||    
T  18749775 tagattagaaaatatatttacataaaattagggttctgggtttggtttgataggaattaggtcattagactcat 18749702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 55267831 - 55267743
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||| |||||| ||||||||||||||||||| |||| |||||||||| ||||||| ||||||||| |||| ||||||||||||||||    
T  55267831 aaaacgatgaaattagattagaaaatagatttaaataagattagggttctaggcttgatttgataggaattaagtcattagactcatcc 55267743  T

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Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 13883333 - 13883394
Alignment:
Q  191 gatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||    
T  13883333 gatttacataaaattagggttctaggcttggtttgaataggattaggtcattagactcatcc 13883394  T

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Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 11902327 - 11902398
Alignment:
Q  28 caatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||||||||| || ||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  11902327 caatccttgtctatattcacttgttccaatattaaaacttcatctttcgatccttcgcttaatatttgtgat 11902398  T

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Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 11902459 - 11902550
Alignment:
Q  161 tataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||| ||||||||||||||||||||| |||  ||||||||||||||||||  | ||||||||||||  ||||||  |||||||||| ||||    
T  11902459 tataagaacggtgaaatagattagaaattagggttacataaaattagggtttaaagcttggtttgattaggattatatcattagacttatcc 11902550  T

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Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 12347593 - 12347534
Alignment:
Q  193 tttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||    
T  12347593 tttacataaaattagggttctaggcttggtttgaataggattaggtcattagactcatcc 12347534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 16953729 - 16953835
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||| |||||||||||||| |||||| |||  ||||||||||||||||||  | |||| |||||||  |||||| ||||||||    
T  16953729 atacttgtta-ttgattataagaacggtgaaatagaatagaaagtaggattacataaaattagggtttaaagcttagtttgattaggattatgtcattag 16953827  T
Q  245 actcatcc 252  Q
    ||| ||||    
T  16953828 acttatcc 16953835  T

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Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 10731394 - 10731301
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| | ||||||||||||||||||| |||  ||||||||||||||||||  | ||||| ||||||  |||||| ||||||||||| ||||    
T  10731394 attataagatcggtgaaatagattagaaattagggttacataaaattagggtttaaagcttgatttgattaggattatgtcattagacttatcc 10731301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 10945163 - 10945070
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| | ||||||||||||||||||| |||  ||||||||||||||||||  | ||||| ||||||  |||||| ||||||||||| ||||    
T  10945163 attataagatcggtgaaatagattagaaattagggttacataaaattagggtttaaagcttgatttgattaggattatgtcattagacttatcc 10945070  T

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Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 24493182 - 24493106
Alignment:
Q  177 tagattagaaaatagatttacataaaa--ttagggttcgaggcttggtttgatagggattaggtcattagactcatc 251  Q
    |||||||||||||||||||| ||| ||  |||||| || ||||||||||||||||| |||| |||||||||||||||    
T  24493182 tagattagaaaatagatttaaatataagattagggctctaggcttggtttgataggaattaagtcattagactcatc 24493106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 4743046 - 4742978
Alignment:
Q  181 ttagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactca 249  Q
    |||||||||||||||| |||| |||||||||| || |||||||||||||| |||| | |||||||||||    
T  4743046 ttagaaaatagatttaaataagattagggttctagacttggtttgataggaattaagccattagactca 4742978  T

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Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 9857476 - 9857370
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||| || |||||||||||||||||| |||  |||| |||||||||||||  | | ||||||||||  |||||| ||||||||    
T  9857476 atacttgtta-ttgattataagaatggtgaaatagattagaaattagggttacgtaaaattagggtttaaagtttggtttgattaggattatgtcattag 9857378  T
Q  245 actcatcc 252  Q
    ||| ||||    
T  9857377 acttatcc 9857370  T

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Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 39558 - 39656
Alignment:
Q  149 ttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagac 246  Q
    ||||||||||||||||| |  |||||||| |||||||||| |||||||| ||||||||||||||   || || |||||||  |||||| ||||||||||    
T  39558 ttgttaattcattataagactggtgaaattagattagaaagtagatttatataaaattagggtttatggtttcgtttgattaggattacgtcattagac 39656  T

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Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 11922125 - 11922216
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||  |||||||||| ||| || ||||||||| ||||||| ||||||| ||||||| | |||||| |||||||||||    
T  11922125 tagactattttcatgttttgcaatccttgtctaaattcacttgttccaatattaagacttcatatttcgatccatcgcttaatatttgtgat 11922216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 20058925 - 20059067
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| | || ||||||    | |||| || ||||||||||||  | |||||| |||| | ||||||    
T  20058925 ttgatatttgagatgatgaattaacaattactaaccctccactttcgcttctacagtttggtaattgttaattcatg-tgaaaacgatgaatttagatta 20059023  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgat 227  Q
    |||| |||||||| |||||||| |||||| | ||||||||||||    
T  20059024 gaaagtagatttatataaaatttgggttcaatgcttggtttgat 20059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 22809346 - 22809421
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||| | || ||||||| || || ||||| |||||||| |||| |||| |||||||||||    
T  22809346 tagattagaaaatagatttaaacaagattagggctctagacttgggttgataggaattaagtcaatagactcatcc 22809421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 31594216 - 31594075
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaa-atagatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| | || |||||||   | |||| || ||||||||||| | | |||||||||||  || ||||    
T  31594216 ttgatatttgagatgatgaattaacaattactaaccctccactttcgcttttacagtttggtaattgttaattca-tgtgaaaacggtgaatttatatta 31594118  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgat 227  Q
    |||||| |||||| |||||||| |||||| ||||||| ||||||    
T  31594117 gaaaat-gatttatataaaattggggttcaaggcttgatttgat 31594075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 7197459 - 7197391
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattaga 245  Q
    ||||||||||| |||  ||||||||||||||||||  | ||||||||||||  |||||| |||||||||    
T  7197459 tagattagaaattagggttacataaaattagggtttaaagcttggtttgattaggattaagtcattaga 7197391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 9857593 - 9857522
Alignment:
Q  28 caatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||||||||| || ||| ||||||||| ||||||||| |||||  |||||| |||||||| |||||||||||    
T  9857593 caatccttgtctatattcacttgttccaatattaaaatttcattattcgatccttcgcttaatatttgtgat 9857522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 10731543 - 10731468
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttc 82  Q
    |||| |||| ||||||||| ||| |||||| ||| || ||||||||| |||||||||||||||||| |||| ||||    
T  10731543 tagactattttcatgtttcgcaaaccttgtctaaattcacttgttccaatattaaaacttcatcttacgatccttc 10731468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 10945312 - 10945237
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttc 82  Q
    |||| |||| ||||||||| ||| |||||| ||| || ||||||||| |||||||||||||||||| |||| ||||    
T  10945312 tagactattttcatgtttcgcaaaccttgtctaaattcacttgttccaatattaaaacttcatcttacgatccttc 10945237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 43701411 - 43701474
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgat 227  Q
    ||||||||||| | |||||||||| |||||||| |||||||||||| || | ||||||||||||    
T  43701411 aaaacggtgaatttagattagaaagtagatttatataaaattagggctcaatgcttggtttgat 43701474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 39043328 - 39043416
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||| ||| |||  |||| ||| |||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  39043328 aaaacggtgaatttagattataaactagggttacgtaagattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 39043416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 26854479 - 26854232
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||| ||||||||| ||| |||| |||||||||||| ||||||    
T  26854479 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgctttgctttgatatttgtgatgatgaat 26854380  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||  ||||||    
T  26854379 taacaagtactaaccctccgttgtcgctttatgagtttgatacttgttaattcattataaaaacgatgaaattagattagaaagtagatttatctaaaat 26854280  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||    
T  26854279 tagggttcgagtcttggtttgattaggattaggtcattagactcatcc 26854232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 55 - 252
Target Start/End: Original strand, 14161862 - 14162061
Alignment:
Q  55 atattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgtt 153  Q
    |||| |||||||| ||||||||| |||||||| |||||||||||| ||||||| ||||||| |||||||  | ||||||||||||| |||||||||| ||    
T  14161862 atatcaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaattaacaagtattaaccctctgttgtcgctttatgagtttgatacttctt 14161961  T
Q  154 aattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  14161962 aattcattataaaaacggtgaaattagattagaaattagatttacataaaattagggttcgatgcttggtttgatcaggattaggtcattagactcatcc 14162061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 19791914 - 19792155
Alignment:
Q  14 attctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaattcacaa 111  Q
    |||||||||||||||||||||||| |||||| ||||||| | |||| | |||||| | || ||||  ||||||| |||||||||||| ||||||| ||||    
T  19791914 attctcatgtttcacaatccttgtctaatttcacttgttacaatatcataacttcttattacgatgtttcgctttgatatttgtgatgatgaattaacaa 19792013  T
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattagggt 210  Q
    |||| ||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||    
T  19792014 gtaccaacccttcgttgtcgcattatgagtttgatacttgttaattcattataaaaatggtgaaattagattagaaagtagttttacataaaattagggt 19792113  T
Q  211 tcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    || | |||| |||||||  |||||||||||||||| ||||||    
T  19792114 tcaatgcttagtttgattaggattaggtcattagattcatcc 19792155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 21319832 - 21319591
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| ||| || || |||||| |||||||| |||| ||||||| | | | |||| |||||| |||| |||||||    
T  21319832 tagactattgtcatgtttctcaatccttgtctaaattcacctgttccaatattaaatcttcttctttcggtccattgcttaatatttttgatgatgaatt 21319733  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaa-atagattagaaaatagatttacataaaatt 205  Q
     ||||||||||||||| || |||||| |||||| |||||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  21319732 aacaagtactaaccctccgttgtcgcattatgagtttgatactttttaattcattataaaaacggtgaatttagagtagaaaatagatttacataaaatt 21319633  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||||||||||||||||||  |||||| |||||||||||    
T  21319632 agggttcgaggcttggtttgattaggattaagtcattagact 21319591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 24221233 - 24221476
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||| | ||| |    
T  24221233 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaaactttatctttcgatatttcgcttgatatttgtgatgacgaaat 24221332  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| |   |  ||   |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||||    
T  24221333 aacaactattaaacttcatctttcggtccttcgata--atacttgttatttcattagaaaaacggtgaaatagattagaaaatagatttacacaagatta 24221430  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||    
T  24221431 gggttctaggcttggtttgacagggattaggtcattagaatcatcc 24221476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 22905004 - 22904759
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||||||||||| |||||| |||| |||||| ||||||||| |||| ||||| ||||||||||||  ||||||||||||||||||| ||||| |    
T  22905004 tagactattctcatgtttgacaatcattgtctaatttcacttgttccaatatcaaaacatcatctttcgatcgttcgcttgatatttgtgatgatgaaat 22904905  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaa-cggtgaaatagattagaaaatagatttacataaaatt 205  Q
     |||| || ||| | |   || ||| |   |  |||  |||||||||| | ||||| ||||| ||||||| || |||||||||||||||||||||| |||    
T  22904904 aacaactattaaacttcacctttcggtccttcgatta-atacttgttattccattagaaaaaacggtgaattatattagaaaatagatttacataagatt 22904806  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  22904805 agggttcaaggcttggtttgatagggattaggtcattagactcatcc 22904759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 24342347 - 24342222
Alignment:
Q  128 gtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttga 226  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  24342347 gtcgcattatgagtttgatacttattaattcattataaaaacggtgaaattaaattagaaaatagatttacataaaattagggttcgaggcttggtttga 24342248  T
Q  227 tagggattaggtcattagactcatcc 252  Q
    |  |||||||||||||| ||| ||||    
T  24342247 ttaggattaggtcattaaacttatcc 24342222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 24967663 - 24967417
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||  ||| |||||| |||||| ||||||||| |||||||||||||||||||||||  ||||||| ||||||||||| |||||||    
T  24967663 tagactattctcatgttttgcaacccttgtctaatttcacttgttccaatattaaaacttcatctttcgatcattcgcttaatatttgtgatgatgaatt 24967564  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     |||| |||| |||||| |||  |||| || | |  ||  || ||| |||||||||||||||||||||||| ||||||||||| |||||||| ||||||     
T  24967563 aacaattactaaaccctccgcgttcgc-ttcttagcttagtaattgctaattcattataaaaacggtgaaattagattagaaagtagatttatataaaac 24967465  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||   || ||||||||||  |||||  ||||||||||| ||||    
T  24967464 tagggtttatggtttggtttgattaggattgcgtcattagacttatcc 24967417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 23193620 - 23193840
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||| |||| ||||||  | |||||| |   |   |||| ||||| ||| |||||||    
T  23193620 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaactcta-ctttcgctttatgaattgacatttgagatgatgaatt 23193718  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaatt 205  Q
     |||| |||||||||| | || |||||| |||| ||||||| ||||||||||||||||| |||||||||| ||||||||||| |||||||| ||||||||    
T  23193719 aacaaatactaaccctccactttcgcttcatgagtttgatatttgttaattcattataacaacggtgaaattagattagaaagtagatttatataaaatt 23193818  T
Q  206 agggttcgaggcttggtttgat 227  Q
    | ||||| ||||||| ||||||    
T  23193819 aaggttcaaggcttgatttgat 23193840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 21139998 - 21139830
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||  ||| ||||||| |||| |||||||||| |||  ||||||||||| |||| || |||||||||||||||||||||||||||| |||||||    
T  21139998 ttgatattttagatgatgaattaacaattactaaccctccgcattcgctttatgagtttggtaattgttaattcattataaaaacggtgaaattagatta 21139899  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||||||| ||||||||||||||   || || |||||||  |||||| ||||||||||| ||||    
T  21139898 gaaagtagatttatataaaattagggtttatggtttagtttgattaggattacgtcattagacttatcc 21139830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 29004041 - 29003795
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||| |||| | |||||| ||||||||| ||||||||||||||||||||||| |||||| | ||||||||||| |||||||    
T  29004041 tagactattctcatgtttcgcaacccttttctaatttcacttgttccaatattaaaacttcatctttcgatccttcgcctaatatttgtgatgatgaatt 29003942  T
Q  107 cacaagtact-aacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     |||||| || |||||| ||   ||||||  | |  ||  || ||| ||||||||||||||| | |||||| ||||||||||| |||||||| ||||||     
T  29003941 aacaagtgctaaaccctccgtgttcgcttcct-agcttactaattgctaattcattataaaacctgtgaaattagattagaaagtagatttatataaaac 29003843  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    || ||||   || ||||||||||  |||||| ||||||||||| ||||    
T  29003842 taaggtttatggtttggtttgattaggattatgtcattagacttatcc 29003795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 23221291 - 23221411
Alignment:
Q  108 acaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaatta 206  Q
    |||| |||||||||| | || ||||||||||| ||||||| ||||||||||||||||| | |||||||| ||||||||||| |||||| | |||||| ||    
T  23221291 acaaatactaaccctccactttcgctttatgagtttgatatttgttaattcattataacatcggtgaaattagattagaaattagattcatataaaacta 23221390  T
Q  207 gggttcgaggcttggtttgat 227  Q
    |||||| ||||||||||||||    
T  23221391 gggttcaaggcttggtttgat 23221411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 15636314 - 15636239
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15636314 tagattagaaaaatagatttacataaaattagggttctaggcttggtttgata-ggattaggtcattagactcatcc 15636239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 15634541 - 15634467
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatc 251  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15634541 tagattagaaaaatagatttacataaaattagggttctaggcttggtttgata-ggattaggtcattagactcatc 15634467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 18572165 - 18572239
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatc 251  Q
    |||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  18572165 tagattagaaaatagatttacacaagattagggttctatgcttggtttgatagggattaggtcattaggctcatc 18572239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 25431892 - 25431967
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  25431892 tagattagaaaatagattcatataagattagggttctaggcttggtttgataggaattaagtcattagactcatcc 25431967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 1990311 - 1990415
Alignment:
Q  149 ttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||| ||||   || ||||||||||  |||||| |||||||||||    
T  1990311 ttgttaattcattataaaaacggtgaaattagattagaaagtatatttatataaaattaaggtttatggtttggtttgattaggattacgtcattagact 1990410  T
Q  248 catcc 252  Q
     ||||    
T  1990411 tatcc 1990415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 24887233 - 24887161
Alignment:
Q  180 attagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||| |||| ||||||| ||||||||    
T  24887233 attagaaaatagattcacataagattagggttctaggcttggtttgataggaattaagtcattatactcatcc 24887161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 18008530 - 18008439
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| |||||||||||||||||||| || ||| ||||||||| |||||||||||||||||||| || | |||||| |||||||||||    
T  18008530 tagaatattttcatgtttcacaatccttgtctatattcacttgttccaatattaaaacttcatctttcaatccatcgcttaatatttgtgat 18008439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 6280079 - 6279937
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctt-tatgaatttgatacttgttaattcattataaaaacggtgaaat-agatt 182  Q
    |||||||||| ||| ||||||| |||| |||||||||| | || |||||| ||| | |||| || ||||||||||||  ||||| ||||||| | |||||    
T  6280079 ttgatatttgagatgatgaattaacaattactaaccctccactttcgcttctat-agtttggtaattgttaattcatgttaaaa-cggtgaatttagatt 6279982  T
Q  183 agaaaatagatttacataaaattagggttcgaggcttggtttgat 227  Q
    ||||| || ||||| ||||||||||||||| ||||||||||||||    
T  6279981 agaaagtaaatttatataaaattagggttcaaggcttggtttgat 6279937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 23455838 - 23455745
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| ||||||||||||||||||||| |||  ||||||||||||||||||  | ||| |||||||   |||||| ||||||||||| ||||    
T  23455838 attataagaacggtgaaatagattagaaattagggttacataaaattagggtttaaagctcggtttgactaggattatgtcattagacttatcc 23455745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 26013274 - 26013135
Alignment:
Q  113 tactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggtt 211  Q
    |||||||||||| || |||||| |||| |||| || ||||||||||||  | ||||||||||| | |||||||||| |||  ||||||||||||||||||    
T  26013274 tactaacccttcactttcgcttcatgattttggtaattgttaattcatg-tgaaaacggtgaatttagattagaaattagggttacataaaattagggtt 26013176  T
Q  212 cgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
      || |||  ||||||  |||||| ||||||||||| ||||    
T  26013175 taagacttcatttgattaggattatgtcattagacttatcc 26013135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 23455968 - 23455897
Alignment:
Q  28 caatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||||||||| || ||| ||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||    
T  23455968 caatccttgtctatattcacttgttccaatattaaaacttcatctttcgatccttcacttaatatttgtgat 23455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 18008365 - 18008304
Alignment:
Q  186 aaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    |||||||||||||||||| || |||| ||| |||||||||||  ||||||||||||||||||    
T  18008365 aaatagatttacataaaactatggttggagacttggtttgattaggattaggtcattagact 18008304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 22285213 - 22285138
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||  ||||||||||||||||||  | ||||||||||||  |||||| ||||||||||| ||||    
T  22285213 tagattagaaattagggttacataaaattagggtttaaagcttggtttgattaggattatgtcattagacttatcc 22285138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 31469534 - 31469589
Alignment:
Q  197 cataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||| ||||| |||||||||||||   |||||||||||||||||||||||    
T  31469534 cataaaattatggttctaggcttggtttgaataggattaggtcattagactcatcc 31469589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 15759797 - 15759727
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||||||| |||  ||||||||||||||||||  | ||||||||||||  |||||| |||||||||||    
T  15759797 tagattagaaattagggttacataaaattagggtttaaagcttggtttgattaggattatgtcattagact 15759727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 42418357 - 42418440
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||||||| | |||||||||| |||  ||||||||||||||||||  |  |||||||||||  |||||| |||||||||||    
T  42418357 aaaacggtgaatttagattagaaattagggttacataaaattagggtttaaaacttggtttgattaggattatgtcattagact 42418440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 6570419 - 6570506
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  |||||||| |||||||||  || |||||||||||  |||||| ||||||||||| ||||    
T  6570419 aaaacggtgaatttagattagaaactagggttacataagattagggttaaag-cttggtttgattaggattatgtcattagacttatcc 6570506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 8e-76; HSPs: 77)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 3924046 - 3923799
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||| |||||||||| ||| || ||||||||| |||||||| |||| ||||||||| |||| ||| |||||||||||||||||||    
T  3924046 tagactattctcatgtttcgcaatccttgtctaaattcacttgttccaatattaaagcttcttctttcgatgcttcactttgatatttgtgattatgaat 3923947  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaat 204  Q
    | ||||||| | ||||| |||||  |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| |||||||    
T  3923946 taacaagtattcaccctccgctgctgctttatgaatttgatacttgttaattcattataaaaatggtgaatttagattagaaaatagatttatataaaat 3923847  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  3923846 tagggttcgaggcttggtttgataggaattaggccattagactcatcc 3923799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 252
Target Start/End: Original strand, 17793676 - 17793901
Alignment:
Q  28 caatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaagtactaacccttcgc 126  Q
    |||||||||| |||||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||||   |    
T  17793676 caatccttgtctaatttcatttgttccaatatcaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattaacaactatcaaccctcgcc 17793775  T
Q  127 tgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttga 226  Q
    | ||| |||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17793776 tttcgatttattgatttaatacttgttaattcattataaaaacgatgaaatagattagaaaatagatttacataaatttagggttcgaggcttggtttga 17793875  T
Q  227 tagggattaggtcattagactcatcc 252  Q
    ||||||||| ||||||||||| ||||    
T  17793876 tagggattatgtcattagacttatcc 17793901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 26822259 - 26822019
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttga-tatttgtgattatgaattcaca 110  Q
    |||||||||||||  |||||||||| |||||| ||||||||| |||| |||||||| ||||||||| |||||||| | |||||||||| || |||| |||    
T  26822259 tattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcgctttaatatttgtgatgataaattaaca 26822160  T
Q  111 agtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattaggg 209  Q
    |||||||||||| |||| |||| |||| | |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  26822159 agtactaaccctccgctatcgcattataagtttgatacttgttaattcattataaaaatggtgaaattagattagaaaatagatttacataaaattaggg 26822060  T
Q  210 ttcgaggcttggtttgatagggattaggtcattagactcat 250  Q
    ||||||||||| ||||||  |||||||||||||||||||||    
T  26822059 ttcgaggcttgatttgattaggattaggtcattagactcat 26822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 25923068 - 25923310
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaattcaca 110  Q
    |||||||||||||| |||||||||| |||||| ||||||||| |||| |||||||| ||||||||| |||||||| |||||||||||| ||||||| |||    
T  25923068 tattctcatgtttcgcaatccttgtctaatttcacttgttccaatataaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaattaaca 25923167  T
Q  111 agtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattaggg 209  Q
    | |||||||||| |||| ||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  25923168 aatactaaccctccgctatcgctttatgagtttggtatttgtttattcattataaaaacggtgaaattagattagaaagtagatttatataaaattaggg 25923267  T
Q  210 ttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||  ||| || ||||||||||||||||    
T  25923268 ttcgaggcttggtttgattaggaatatgtcattagactcatcc 25923310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 12660124 - 12660366
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||||   ||||||| |||||| ||||||||| |||| |||||||| | ||||||| |||| ||| |||||||||||| ||||||    
T  12660124 tagactattctcatgtttca---tccttgtttaatttcacttgttccaatatcaaaacttctt-tttcgatgcttctctttgatatttgtgatgatgaat 12660219  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  12660220 taacaagtactaaccctccgctgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattagattagaaattagatttac-taaaat 12660318  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||    
T  12660319 ttgggttcgaggcttggtttgatagggattagatcattagactcatcc 12660366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 19612415 - 19612661
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||| ||||||||| |||| ||| |||||||||||| ||||||    
T  19612415 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaaacttcttctttcgatgcttcactttgatatttgtgatgatgaat 19612514  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  19612515 taacaagtactaaccctccactgtcgctttatgagtttgatacttgttaattctttataaaaacggtgaaattagattagaaagtaga-ttatataaaat 19612613  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||| |||||| ||||   |||||||||| ||||||||||||    
T  19612614 tagggttcgaagcttggcttgactaggattaggtcgttagactcatcc 19612661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 28733817 - 28734063
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||| |||||||||  |||||| ||||||||| |||| |||| ||| |||||||||  ||||||| |||||||||||| |||||     
T  28733817 tagactattctcatgtttcgcaatccttgc-taatttcacttgttccaatatcaaaatttcttctttcgatgtttcgctttgatatttgtgatgatgaac 28733915  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  28733916 taacaagtactaaccctcctctgtcgcattatgagtttgatacttgttaattcattataaaaacggtgaaattagattagaaagtagatttacataaaat 28734015  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    || ||||||||||||| ||||||  |||||||||||||||||||||||    
T  28734016 taaggttcgaggcttgatttgatcaggattaggtcattagactcatcc 28734063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 23523624 - 23523871
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||| ||||||| |||||||||| |||||| ||||||||  |||| |||||||| ||||||||| |||||||| |||||||||||| ||||||    
T  23523624 tagactattcttatgtttcgcaatccttgtctaatttcacttgttcaaatatcaaaacttcttctttcgatgcttcgctttgatatttgtgatgatgaat 23523723  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaat 204  Q
    | ||||||||  ||||| || |||| |||||| | |||||||||||||||||||||| |||||| ||||||| |||||||||| |||||||| |||||||    
T  23523724 taacaagtaccgaccctccgatgtcactttataagtttgatacttgttaattcattacaaaaacagtgaaattagattagaaagtagatttatataaaat 23523823  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  23523824 tagggttcgaggcttggtttgattaggattaagtcattagactcatcc 23523871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 19994005 - 19993759
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||  ||||||||| |||||||| ||||||||| || ||||||    
T  19994005 tagactattctcatgtttcacaatccttgtctaatttcacttgttccgatatcaaaaattt-tctttcgatgcttcgctttgatatttgtcatgatgaat 19993907  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | |||| |||||||||| || ||| ||||||||| |||| || | |||||||||||||||||||||||||| ||||||| ||| |||||||| |||||||    
T  19993906 taacaaatactaaccctccgttgttgctttatgagtttggtattcgttaattcattataaaaacggtgaaattagattaaaaagtagatttatataaaat 19993807  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| ||||||||||  ||||||| |||||||||||||||    
T  19993806 tagggttcgaggtttggtttgattaggattagttcattagactcatcc 19993759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 24392573 - 24392818
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||||||||||||||||||||||||||||| |||||| |||||||   |||| ||||||||||||||||||  || |||| |||||||||||| ||||||    
T  24392573 tagattattctcatgtttcacaatccttgtctaatttcacttgttaaaatatcaaaacttcatctttcgatcttttgctttatatttgtgattgtgaatt 24392672  T
Q  107 cacaagtactaacccttcgc-tgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaa-t 204  Q
     |||| || ||| | ||||| | ||| |||||  |||  |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  24392673 aacaactattaaac-ttcgcctttcggtttatcgatta-atacttgttttttcattataaaaatggtgaaatagattagaaaatagatttacataaaaat 24392770  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24392771 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 24392818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 25030895 - 25031142
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||  |||||||||| |||||| ||||||||| |||| |||||||| || |||||| |||||||| ||||||| |||| ||||||    
T  25030895 tagactattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaacttcttccttcgatgcttcgctttgatatttatgatgatgaat 25030994  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | |||| |||||||||| || |||||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||| |||||||    
T  25030995 taacaaatactaaccctccgttgtcgcattatgagtttgatatttgttaattcattataaaaacagtgaaattagattagaaattagatttatataaaat 25031094  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    || ||||||||||||| ||||||   ||||| ||||||||||||||||    
T  25031095 taaggttcgaggcttgatttgattatgattatgtcattagactcatcc 25031142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 18627839 - 18627589
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| ||||||||||||||||||||||||| |||||| |||| |||| |||| || ||||| |||||| || ||| | || ||||||||||||  | |||    
T  18627839 tagactattctcatgtttcacaatccttgtctaatttcactttttccaatatcaagacttcttctttctatgctttgttttgatatttgtgatggtaaat 18627740  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| || ||| ||||| ||| |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||    
T  18627739 taacaagtactaaccctgcgttgttgctttgtgagtttgatacttgttaattcattatataaacggtgaaattagattagaaagtagatttatataaaat 18627640  T
Q  205 tagggttcgaggcttggtttgatag---ggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||||     |||||||||||||||||||||||    
T  18627639 tagggttcgaggcttggtttgattattaggattaggtcattagactcatcc 18627589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 18974064 - 18973821
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    ||||||||||||||||||||| |||| ||| |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18974064 tagattattctcatgtttcactatccctgtctaatttcacttgttccaatattaaaacttcatctttcgattcttcgcttgatatttgtgattatgaatt 18973965  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     | || || ||| | ||  || ||| |  ||   ||| |||||||||  || |||||||||||| ||||| ||||||||||||| ||||||||||||| |    
T  18973964 aaaaactattaaactttgcctttcggtcaat-cgtttaatacttgtt-ttttattataaaaacgatgaaaaagattagaaaatatatttacataaaatca 18973867  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  18973866 gggttcgagacttggtttgatagggattaggtcattaaactcatcc 18973821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 23510076 - 23510267
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||  |||||||||| || ||| ||||||| | |||| |||||||| ||||||||| |||| ||| |||||||||||| ||||||    
T  23510076 tagactattctcatgttttgcaatccttgtctactttcacttgttacaatatcaaaacttcttctttcgatgcttcactttgatatttgtgatgatgaat 23510175  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtga-aatagattagaaaatagattta 196  Q
    | ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  23510176 taacaagtactaaccctccgatgtcgctttatgagtttgatacttgttaattcattataaaaacggtgacattagattagaaagtagattta 23510267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 20221594 - 20221351
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||| | |||| ||||||||| |||||||| |||||||||||||||||||| ||||| |    
T  20221594 tagactattctcatgtttcgcaatccttgtctaatttcacttgtttcaatatcaaaacttcaactttcgatccttcgcttgatatttgtgatgatgaaat 20221495  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| |   |  |||  || ||||||| ||||||| |||||||||||| |||||||||||||| |||||||||| ||||    
T  20221494 aacaactattaaacttcacctttcgatccttcgatta-atgcttgttatttcattagaaaaacggtgaattagattagaaaatacatttacataagatta 20221396  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  20221395 gggttcgaggcttggtttgata-ggattaggtcattagactcatcc 20221351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 22115578 - 22115335
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||| | |||| ||||||||| |||||||| |||||||||||||||||||| ||||| |    
T  22115578 tagactattctcatgtttcgcaatccttgtctaatttcacttgtttcaatatcaaaacttcaactttcgatccttcgcttgatatttgtgatgatgaaat 22115479  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| |   |  |||  || ||||||| ||||||| |||||||||||| |||||||||||||| |||||||||| ||||    
T  22115478 aacaactattaaacttcacctttcgatccttcgatta-atgcttgttatttcattagaaaaacggtgaattagattagaaaatacatttacataagatta 22115380  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  22115379 gggttcgaggcttggtttgata-ggattaggtcattagactcatcc 22115335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 12657826 - 12657959
Alignment:
Q  116 taacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcga 214  Q
    ||||||| ||||||||  |||||| |||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  12657826 taaccctccgctgtcgtattatgagtttgatacttgttaattcattataaaaacggttaaattatattagaaaatagatttacataaaattagggttcga 12657925  T
Q  215 ggcttggtttgatagggattaggtcattagactc 248  Q
    | ||||||||||||| |||||||| |||||||||    
T  12657926 gacttggtttgatagtgattaggtaattagactc 12657959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 20218231 - 20218399
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| || |||||||  | ||||||||||||| |||| || |||||||||||||||||||||||||||| |||||||    
T  20218231 ttgatatttgtgatgatgaattaacaactagtaaccctctgttgtcgctttatgagtttggtatttgttaattcattataaaaacggtgaaattagatta 20218330  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||||||| ||||||||||||||   |||||||||||||  |||||| ||||||||||||||||    
T  20218331 gaaagtagatttatataaaattagggtttatggcttggtttgattaggattatgtcattagactcatcc 20218399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 22112256 - 22112424
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| || |||||||  | ||||||||||||| |||| || |||||||||||||||||||||||||||| |||||||    
T  22112256 ttgatatttgtgatgatgaattaacaactagtaaccctctgttgtcgctttatgagtttggtatttgttaattcattataaaaacggtgaaattagatta 22112355  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||||||| ||||||||||||||   |||||||||||||  |||||| ||||||||||||||||    
T  22112356 gaaagtagatttatataaaattagggtttatggcttggtttgattaggattatgtcattagactcatcc 22112424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 18993492 - 18993358
Alignment:
Q  94 gtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaataga 192  Q
    ||||| ||||||| ||||||||||||||  ||||||| |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  18993492 gtgatgatgaattaacaagtactaacccaacgctgtcactttatgagtttgatgcttgttaattcattataaaaacggtgaaattagattagaaagtaga 18993393  T
Q  193 tttacataaaattagggttcgaggcttggtttgat 227  Q
    |||||| |||||||||||||||||||| |||||||    
T  18993392 tttacagaaaattagggttcgaggctttgtttgat 18993358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 29682877 - 29682770
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| ||||||| |||||||||||||||||||| || |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  29682877 atacttgttatttcattagaaaaacggtgaaatagattaaaatatagatttacataagattagggttcgatgcttggtttgatagggattaggtcattag 29682778  T
Q  245 actcatcc 252  Q
    ||||||||    
T  29682777 actcatcc 29682770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 31965330 - 31965437
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  31965330 atacttgttatttcattagaaaaacggtgaaatagattagaaaatagatttacataagatcagggttcgagacttggtttgatagagattaggtcattag 31965429  T
Q  245 actcatcc 252  Q
    ||||||||    
T  31965430 actcatcc 31965437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 25338919 - 25339161
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaattcaca 110  Q
    |||||| ||||||| ||||| |||| |||||  | ||||||| |||| |||||||  ||||| ||| |||| ||| |||||||||||| ||||||| |||    
T  25338919 tattcttatgtttcgcaatcattgtctaattccatttgttccaatatcaaaacttattcttttgatgcttcactttgatatttgtgataatgaattaaca 25339018  T
Q  111 agtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattaggg 209  Q
    | || |||||||  | ||||||||||||| |||| || |||||||||||||||||||| ||||||| | ||||||||| |||||||| ||||||||||||    
T  25339019 aataataaccctatgttgtcgctttatgagtttggtatttgttaattcattataaaaatggtgaaattcgattagaaagtagatttatataaaattaggg 25339118  T
Q  210 ttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||| || |||||||||||  |||||| ||||||| ||| ||||    
T  25339119 ttcaagacttggtttgattaggattatgtcattaaacttatcc 25339161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 20464645 - 20464539
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  20464645 atacttgtta-ttgattataaaaacggtgaattaaattagaaaatagatttacataaaattagggtttaacgcttggtttgatagggattaggtcattag 20464547  T
Q  245 actcatcc 252  Q
    ||||||||    
T  20464546 actcatcc 20464539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 26138992 - 26138824
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| ||||| |||| |||  ||||||||||| |||| || ||||||||||||||| |||||||||||| |||||||    
T  26138992 ttgatatttgtgatgatgaattaacaaatactatccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattagatta 26138893  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| | |||||| ||||||||||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  26138892 gaaagtggatttatataaaattagggtttatggtttggtttgattaggattacgtcattagacttatcc 26138824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 16207545 - 16207631
Alignment:
Q  163 taaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactca 249  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  16207545 taaaaacggtgaattagattagaaaatagatttagataaaattagggtccgagacttggtttgatagggattaggtcattagactca 16207631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 15162469 - 15162377
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||    
T  15162469 attataagaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggcatgata-ggattaggtcgttagactcatcc 15162377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 20225489 - 20225264
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||||| |||| |||||| | ||||||| |||| ||  |||||||||||||| |||| ||||| ||||||||| ||||| |    
T  20225489 tagactattctcatgtttcgcaatcgttgtctaatttcaattgttccaatatcaa--cttcatctttcgatccttcccttgacatttgtgatgatgaaat 20225392  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| |||   || ||| |   |  |||  ||||||| || ||||||| |||||||||||| ||||||||||||| ||||||||||| ||||    
T  20225391 aacaactattaaacctcacctttcggtgcttcgatta-atacttgctatttcattagaaaaacggtgaattagattagaaaattgatttacataagatta 20225293  T
Q  207 gggttcgaggcttggtttgatagggatta 235  Q
    |||||||||||||||||||||||||||||    
T  20225292 gggttcgaggcttggtttgatagggatta 20225264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 22119473 - 22119248
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||||| |||| |||||| | ||||||| |||| ||  |||||||||||||| |||| ||||| ||||||||| ||||| |    
T  22119473 tagactattctcatgtttcgcaatcgttgtctaatttcaattgttccaatatcaa--cttcatctttcgatccttcccttgacatttgtgatgatgaaat 22119376  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| |||   || ||| |   |  |||  ||||||| || ||||||| |||||||||||| ||||||||||||| ||||||||||| ||||    
T  22119375 aacaactattaaacctcacctttcggtgcttcgatta-atacttgctatttcattagaaaaacggtgaattagattagaaaattgatttacataagatta 22119277  T
Q  207 gggttcgaggcttggtttgatagggatta 235  Q
    |||||||||||||||||||||||||||||    
T  22119276 gggttcgaggcttggtttgatagggatta 22119248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 25507920 - 25507752
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| |||||||||| |||  ||||||||||| |||| || ||||||||||||||| |||||||||||| |||||||    
T  25507920 ttgatatttgtgatgatgaattaacaaatactaaccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattagatta 25507821  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| | |||||| |||||||||||||    || ||||||||||  |||||| ||||||| ||| ||||    
T  25507820 gaaagtggatttatataaaattagggtgtatggtttggtttgattaggattacgtcattaaacttatcc 25507752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 15172631 - 15172389
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    ||||||||| ||||||||| |||||| ||| |||||| ||||||||| |||| ||||| |||| ||||||| |||| ||||||||||||||| |   | |    
T  15172631 tagattattgtcatgtttcgcaatccctgtctaatttcacttgttccaatatcaaaacatcatatttcgatccttcacttgatatttgtgatgaatcaat 15172532  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| |  ||  | || ||| ||||| ||| ||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  15172531 aacaactattaaacttcatctttcgatccatcga-ttaatatttgtt-attgattataagaacggtaaaattgattagaaaatagatttacataaaatta 15172434  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||    
T  15172433 gggttcgaggtttggcttgata-ggattaggtcattagactcatcc 15172389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 26018289 - 26018121
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| ||||| |||| |||  ||||||||||| |||| || ||||||||||||||| |||||||||||| |||||||    
T  26018289 ttgatatttgtgatgatgaattaacaaatactatccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattagatta 26018190  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| | |||||| ||||||||||||||   || ||||||||||  ||||||  ||| |||||| ||||    
T  26018189 gaaagtggatttatataaaattagggtttatggtttggtttgattaggattacatcactagacttatcc 26018121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 23639694 - 23639769
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  23639694 tagattagaaaataaatttacataaaattagggttctaggcttggtttgataggaattaggtcattagactcatcc 23639769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 5399484 - 5399391
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  5399484 attataagaacggtgaaatagattagaaaataggtttacataaaattagggtttaaggcttggtttgattaggattacgtcattagacttatcc 5399391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 26157662 - 26157494
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| | || ||||| |||| |||  ||||||||||| |||| || ||||||||||||||| |||||||||||| |||||||    
T  26157662 ttgatatttgtgatgatgaattaataaatactatccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattagatta 26157563  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| | |||||| ||||||||||||||   || ||||||||||  ||||||  ||| |||||| ||||    
T  26157562 gaaagtggatttatataaaattagggtttatggtttggtttgattaggattacatcactagacttatcc 26157494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 245
Target Start/End: Complemental strand, 29254314 - 29254153
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| || |||| |||| ||||||||||  ||  ||||||||||| |||| |  |||||||||||||||| ||||||||||| |||||||    
T  29254314 ttgatatttgtgatgataaattaacaaatactaaccctctgcgttcgctttatgagtttggtgtttgttaattcattatagaaacggtgaaattagatta 29254215  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattaga 245  Q
    |||| || ||||| ||| ||||||||||   || ||||||||||  |||||| |||||||||    
T  29254214 gaaagtatatttatatataattagggtttatggtttggtttgattaggattacgtcattaga 29254153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 17522201 - 17522276
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  17522201 tagattagaaaaatagatttacataaaattagggttctaggcttggtttgata-ggattaggtcattagactcatcc 17522276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 16470382 - 16470137
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| ||||||||| |||||||||| ||| || ||||||||  |||| ||||||||  |||||| |   |   |||||||||| ||| |||||||    
T  16470382 tagactattttcatgtttcgcaatccttgtctaaattcacttgttcaaatatcaaaacttccactttcgcttgatgaattgatatttgagatgatgaatt 16470283  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaa-atagattagaaaatagatttacataaaatt 205  Q
     |||| |||||||||| | || |||||| |||| ||||||| ||||||||||| | | |||||||||||  ||||||||||| |||  ||||| ||||||    
T  16470282 aacaattactaaccctccactttcgcttcatgagtttgataattgttaattca-tgtgaaaacggtgaatttagattagaaattagggttacacaaaatt 16470184  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    | ||||  ||||||||||||||   ||||| ||||||||||| ||||    
T  16470183 aaggtttaaggcttggtttgattaagattatgtcattagacttatcc 16470137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 34108829 - 34108901
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcat 250  Q
    ||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  34108829 tagattagaaattagattgacataaa-ttagggttctaggcttggtttgatagggattaggtcattagactcat 34108901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 24545379 - 24545471
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat 177  Q
    |||||||||| ||| ||||||| |||| |||||||||| |||  ||||||||||| |||| || |||||||||||||||||||||||||||||    
T  24545379 ttgatatttgagatgatgaattaacaaatactaaccctccgcattcgctttatgagtttggtatttgttaattcattataaaaacggtgaaat 24545471  T

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Target: chr6; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 14991956 - 14992047
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||| |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  14991956 tagactattttcatgtttcgcaatccttgtctatattcacttgttccaatattaaaacttcatctttcgatacttcgcttaatatttatgat 14992047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 4741391 - 4741147
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||| |||| |||||| |  |||||| |   |   |||||||||  ||| ||| |||    
T  4741391 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaactccg-ctttcgttttatgaattgatatttaagatgatggatt 4741293  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaatt 205  Q
     ||||  |||||  || |||| |||||||||||||  | |  ||||||||||||||| ||||| ||||||| |||||||||| |||||||| ||||||||    
T  4741292 aacaaacactaaaactccgctttcgctttatgaatcgg-tgtttgttaattcattatgaaaacagtgaaattagattagaaagtagatttatataaaatt 4741194  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  4741193 agggtttatggtttggtttgattaggattacgtcattagacttatcc 4741147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 18396317 - 18396418
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || ||||||| || ||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||  ||||||  |||||||    
T  18396317 atacttgtta-ttgattataagaatggtgaaatagattggaaaataggtttacataaaattagggatcaaggcttggtttgattaggattaaatcattag 18396415  T
Q  245 act 247  Q
    |||    
T  18396416 act 18396418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 6795270 - 6795103
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    ||||||||||  || ||||||| |||| |||||||||| | || ||||||    | ||||||| |||||||||||| || ||||||||||| | ||||||    
T  6795270 ttgatatttgatatgatgaattaacaattactaaccctccactttcgcttctacagtttgataattgttaattcat-attaaaacggtgaatttagatta 6795172  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||  ||||||||||||||||||  ||||||||||||||  |||||| |||||| |||| ||||    
T  6795171 gaaattagggttacataaaattagggtttaaggcttggtttgattaggattatgtcatttgacttatcc 6795103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 9414621 - 9414546
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||    
T  9414621 tagattagaaaaatagattcacataaaattagggttctaggcttggcttgata-ggattaggtcattagactcatcc 9414546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 13168613 - 13168537
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| || ||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||    
T  13168613 tagattagaaaaatatatttacataaaattagggttctaggcttggtttgaataggattaggtcattagactcatcc 13168537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 20464776 - 20464688
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattta-cttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgatta 100  Q
    |||||||||||||   ||||||||| ||||||| |||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||    
T  20464776 tattctcatgttttgaaatccttgtctaatttaacttgttccaatatcaaaacttcatctttcgatcctttgcttgatatttgtgatta 20464688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 21237786 - 21237858
Alignment:
Q  180 attagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||||||| |||||||||| ||||||||||    
T  21237786 attagaaaatagatttacataaaattaaggttctatgcttagtttgataggaattaggtcataagactcatcc 21237858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 20105308 - 20105553
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| ||| |||||| |||||| ||||||| | ||||||||| |||||||||| || |||||| | ||||||||||| |||||||    
T  20105308 tagactattctcatgtttcgcaacccttgtctaatttcacttgtttcaatattaaaa-ttcatctttcaatccttcgcctaatatttgtgatgatgaatt 20105406  T
Q  107 cacaagtactaacccttcgctg-tcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
     || | |||||| || ||  || |||| || | |  ||  || ||| ||||| ||||||||||| |||||| |||||||||||||| ||||| ||||||     
T  20105407 aacgattactaaaccctctgtgttcgc-ttcttagcttagtaattgctaattgattataaaaacagtgaaattagattagaaaataaatttatataaaac 20105505  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||   || ||||||||||  |||||| ||||||| ||| ||||    
T  20105506 tagggtttatggtttggtttgattaggattacgtcattaaacttatcc 20105553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 28721008 - 28721114
Alignment:
Q  14 attctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaattcacaa 111  Q
    ||||||||||||| |||||||||| |||||| ||||||||| |||| |||| ||| |||||||||  |||| || |||||||||||| ||||||| ||||    
T  28721008 attctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaatttcttctttcgatgtttcgttttgatatttgtgatgatgaattaacaa 28721107  T
Q  112 gtactaa 118  Q
    |||||||    
T  28721108 gtactaa 28721114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 8603750 - 8603662
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | ||||||||||||||  ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  8603750 aaaacggtgaatttagattagaaaatagggttacataaaattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 8603662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 23517207 - 23517267
Alignment:
Q  192 atttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  23517207 atttatatagaattagggttcgaggcttggtttgattaggattaggtcattagactcatcc 23517267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 32796355 - 32796430
Alignment:
Q  177 tagattagaaaa-tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||| || ||| |||||||||||||||||||||||    
T  32796355 tagattagaaaaatagattcacataaaattagggttctaggcttggctttata-ggattaggtcattagactcatcc 32796430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 5399634 - 5399543
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||| ||| |||||| ||| || ||||||||| ||||||||||||||||||||||| | |||||| |||||||||||    
T  5399634 tagactattttcatgtttcgcaacccttgtctaaattcacttgttccaatattaaaacttcatctttcgatccatcgcttaatatttgtgat 5399543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 20435650 - 20435488
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||| |||| |||||| || |||||| |   |   |||||||||||||| ||| |||    
T  20435650 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaactcca-ctttcgctttatgaattgatatttgtgatgatggatt 20435552  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacg 170  Q
     |||| |||||||||| | |  |||||| | || ||||||| ||||||||||||||||| ||||    
T  20435551 aacaaatactaaccctcctccttcgcttcaagagtttgatatttgttaattcattataataacg 20435488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 20439353 - 20439196
Alignment:
Q  13 tattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaa 111  Q
    ||||| ||||||||||||||||||| |||||| ||||||||| |||| |||||| || || ||| |   |   |||||||||||||| ||||||| ||||    
T  20439353 tattcccatgtttcacaatccttgtctaatttcacttgttccaatatcaaaactcca-ctatcgctttatgaattgatatttgtgatgatgaattaacaa 20439255  T
Q  112 gtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacg 170  Q
     |||||||||| | || | |||| |||| | ||||| ||||||||||||||||| ||||    
T  20439254 atactaaccctcctctttggcttcatgagtctgatatttgttaattcattataataacg 20439196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 29683013 - 29682928
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatattt 93  Q
    |||| |||| ||||||||| || ||||||| |||||| ||||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  29683013 tagactattatcatgtttcgcagtccttgtctaatttcacttgttccaatatcaaa-cttcatctttcgatacttcgcttgatattt 29682928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 14992106 - 14992199
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| || |||||||||||||||||| ||| |||| ||||||||||||||  | ||||| ||||||  |||||| ||||||||||| ||||    
T  14992106 attataagaatggtgaaatagattagaaattaggtttatataaaattagggtttaaagcttgatttgattaggattatgtcattagacttatcc 14992199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 252
Target Start/End: Complemental strand, 25964242 - 25964078
Alignment:
Q  88 atatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaa 186  Q
    ||||||| ||| ||||||| |||| |||||||||| | || ||||||    | ||||||| ||||||||||||  ||||| ||||||| | |||||||||    
T  25964242 atatttgagatgatgaattaacaattactaaccctccactttcgcttctacagtttgataattgttaattcatgttaaaa-cggtgaatttagattagaa 25964144  T
Q  187 aatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    | ||   ||||||||||||| ||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  25964143 attatggttacataaaattatggtttaaggcttggtttgattaggattatgtcattagacttatcc 25964078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 252
Target Start/End: Complemental strand, 25968889 - 25968725
Alignment:
Q  88 atatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaa 186  Q
    ||||||| ||| ||||||| |||| |||||||||| | || ||||||    | ||||||| ||||||||||||  ||||| ||||||| | |||||||||    
T  25968889 atatttgagatgatgaattaacaattactaaccctccactttcgcttctacagtttgataattgttaattcatgttaaaa-cggtgaatttagattagaa 25968791  T
Q  187 aatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    | ||   ||||||||||||| ||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  25968790 attatggttacataaaattatggtttaaggcttggtttgattaggattatgtcattagacttatcc 25968725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 252
Target Start/End: Complemental strand, 25949651 - 25949484
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| | || ||||||    | ||||||| ||||||||| ||  ||||| ||||||| | ||| ||    
T  25949651 ttgatatttgagatgatgaattaacaattactaaccctccactttcgcttctacagtttgataattgttaattgatgttaaaa-cggtgaatttagagta 25949553  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| |||  ||||||||||||||||||  ||||||| ||||||  |||||| ||||||||||| ||||    
T  25949552 gaaattagggttacataaaattagggtttaaggcttgctttgattaggattatgtcattagacttatcc 25949484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 15470844 - 15470934
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    ||||||||| ||||||||| |||||| ||| |||||| ||||||||| |||  |||||||||| ||||||| |||| |||||||||||||||    
T  15470844 tagattattgtcatgtttcgcaatccctgtctaatttcacttgttcc-ataacaaaacttcatatttcgatccttcacttgatatttgtgat 15470934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 15470993 - 15471044
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggt 210  Q
    |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  15470993 attataagcacggtaaaatagattagaaaatagatttacataaaattagggt 15471044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 13217072 - 13217125
Alignment:
Q  45 acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    ||||||||| ||||||||||||||||||||||| | |||||| |||||||||||    
T  13217072 acttgttccaatattaaaacttcatctttcgatccatcgcttaatatttgtgat 13217125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 13217184 - 13217272
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||| || ||||||||||||||||||||| |     | |||||||||||| |||||||||||||||  ||||||||||||| |||| ||||    
T  13217184 attataagaaaggtgaaatagattagaaaataca-----aaaaaattagggtttgaggcttggtttgattaggattaggtcattcgacttatcc 13217272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 19615009 - 19615120
Alignment:
Q  141 tttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtc 239  Q
    ||||||| ||||||||||||  ||||| ||||||| | |||||||||| |||  |||||||| |||| ||||  ||||||||||||||  |||||| |||    
T  19615009 tttgataattgttaattcatgttaaaa-cggtgaatttagattagaaactagggttacataagattaaggtttaaggcttggtttgattaggattatgtc 19615107  T
Q  240 attagactcatcc 252  Q
    |||||||| ||||    
T  19615108 attagacttatcc 19615120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 29093800 - 29093748
Alignment:
Q  159 attataaaaacggtgaaatagattagaaaatagatttacataaaattagggtt 211  Q
    ||||||| ||||||||||||||||||||| |||  ||||||||||||||||||    
T  29093800 attataagaacggtgaaatagattagaaattagggttacataaaattagggtt 29093748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 22601034 - 22601125
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||| |||||||||| || ||| |||||||   |||||||||||||||||||||||  ||| ||| |||||||||||    
T  22601034 tagactattttcatgtttcgcaatccttgtctatattcacttgtttgaatattaaaacttcatctttcgatcattcacttaatatttgtgat 22601125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 22601171 - 22601277
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || || |||| |||| |||||||||||||||| |||  ||||||||||||||||||  | | ||||||||||   ||||| ||||||||    
T  22601171 atacttgtta-ttgataataagaacgatgaaatagattagaaagtagggttacataaaattagggtttaaagtttggtttgattatgattatgtcattag 22601269  T
Q  245 actcatcc 252  Q
    ||| ||||    
T  22601270 acttatcc 22601277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 15162581 - 15162528
Alignment:
Q  45 acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    ||||||||| |||| |||||||||||||||||| |||| ||| |||||||||||    
T  15162581 acttgttccaatatcaaaacttcatctttcgatccttcactttatatttgtgat 15162528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 1626401 - 1626313
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | ||| |||||| |||  ||||||||||||||||||  |||||||| |||||  |||||| ||||||||||| ||||    
T  1626401 aaaacggtgaatttagaatagaaactagggttacataaaattagggtttaaggcttggcttgattaggattatgtcattagacttatcc 1626313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 22738088 - 22738000
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  ||||||||||||||||||  | ||||||||||||  |||||| || |||||||| ||||    
T  22738088 aaaacggtgaatttagattagaaattagggttacataaaattagggtttcaagcttggtttgattaggattatgttattagacttatcc 22738000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 29093939 - 29093859
Alignment:
Q  19 catgtttcacaatccttgtgta-atttacttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||||||| ||||||| || || ||| ||||||||| ||||||||||||||||||||||| | ||| || |||||| ||||    
T  29093939 catgtttcgcaatcctcgtctatattcacttgttccaatattaaaacttcatctttcgatccatcgtttaatatttatgat 29093859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 252
Target Start/End: Complemental strand, 29360589 - 29360479
Alignment:
Q  141 tttgatacttgttaattcattataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtc 239  Q
    ||||||| | |||||||||| || ||||||||||| | ||||||||||||||  |||||||| |||||||||  | ||||||||||||  |||||| | |    
T  29360589 tttgataatggttaattcat-attaaaacggtgaatttagattagaaaatagggttacataagattagggtt-aaagcttggtttgattaggattatgac 29360492  T
Q  240 attagactcatcc 252  Q
    |||||||| ||||    
T  29360491 attagacttatcc 29360479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 14893839 - 14893772
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttc 74  Q
    |||| |||||||||||||  |||||||||| |||||| ||||||||| |||| |||||||| ||||||    
T  14893839 tagactattctcatgttttgcaatccttgtctaatttcacttgttccaatatcaaaacttcttctttc 14893772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 5949372 - 5949430
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgt-aatttacttgttccgatattaaaact 65  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||  |||| ||||||    
T  5949372 tagactattctcatgtttcacaatccttgtctaaatttacttgttcaaatatcaaaact 5949430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 31965194 - 31965290
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaa 104  Q
    |||| |||| ||||||||  |||||||||| |||||| |||||||   |||| ||| |||||||||| |||  ||||||||||||||||||| |||||    
T  31965194 tagactattatcatgttttgcaatccttgtctaatttcacttgttttaatatcaaa-cttcatcttttgatcattcgcttgatatttgtgatgatgaa 31965290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 14500 - 14260
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||| |||||||  |||||||||| |||||| | ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14500 tagactattcacatgttttgcaatccttgtataatttcatttgttccaatatcaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 14401  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| ||  ||||||   || ||| |||||  |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  14400 aacaactatcaaccctcgcctttcgatttattgatttaatacttgttaattcattataaaaacggtggaatagattagaaaatagatttacataaattta 14301  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  14300 gggttcgaggcttggttcgatagggattaggtcattagact 14260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 173149 - 172902
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| ||||||||| |||  |||||||||| |||||| |||| |||| |||| |||||||  ||||||||| |||||||| |||||||||||| ||||||    
T  173149 tagactattctcatattttgcaatccttgtctaatttcactttttccaatatcaaaacttattctttcgatgcttcgctttgatatttgtgatgatgaat 173050  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| |  ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||| |    
T  173049 taacaagtactaaccctccattgtcgctttatgagtttgatacttgttaattcattatgaaaacggtgaaattagattagaaagtagatttatataaatt 172950  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||| |||||||||  | |||||||||||||||||||||    
T  172949 tagggttcgaggcatggtttgattagaattaggtcattagactcatcc 172902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 120; Significance: 2e-61; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 521159 - 520912
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||| ||||| |||| |||||| ||||||| | |||| |||||||| ||||| ||| |||||||| |||||||||||| ||||||    
T  521159 tagactattctcatgtttcgcaatctttgtctaatttcacttgtttcaatatcaaaacttcttcttttgatgcttcgctttgatatttgtgatgatgaat 521060  T
Q  106 tcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaat 204  Q
    | ||||||||||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  521059 taacaagtactaaccctccgctgtcgcattatgagtttgatatttgttaattcattataaaaacagtgaaattagattagaaagtaaatttacataaaat 520960  T
Q  205 tagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    || ||||||||||||||| ||||   ||||  ||||||||||||||||    
T  520959 taaggttcgaggcttggtatgattaagatttagtcattagactcatcc 520912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 33284 - 33054
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| |||| ||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  33284 tagactattttcatttttcacaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgatccttcgcttgatatttgtgattatgaatt 33185  T
Q  107 cacaagtactaacccttcgctgt-cgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatt 205  Q
     |||| || ||| | ||| || | |  |  ||  |||  |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  33184 aacaactattaaac-ttcacttttcagtccatcgatta-atacttgttaattcattataaatacggtgaaatagattagaaaatagacttacataaaatt 33087  T
Q  206 agggttcgaggcttggtttgatagggattaggt 238  Q
    ||||||| |||||||||||||||||||||||||    
T  33086 agggttcaaggcttggtttgatagggattaggt 33054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 38591 - 38361
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||| |||| ||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38591 tagactattttcatttttcacaatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgatccttcgcttgatatttgtgattatgaatt 38492  T
Q  107 cacaagtactaacccttcgctgt-cgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatt 205  Q
     |||| || ||| | ||| || | |  |  ||  |||  |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  38491 aacaactattaaac-ttcacttttcagtccatcgatta-atacttgttaattcattataaatacggtgaaatagattagaaaatagacttacataaaatt 38394  T
Q  206 agggttcgaggcttggtttgatagggattaggt 238  Q
    ||||||| |||||||||||||||||||||||||    
T  38393 agggttcaaggcttggtttgatagggattaggt 38361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 82425 - 82531
Alignment:
Q  145 atacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||     
T  82425 atacttgtta-ttgattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttcaaagcttggttgtatagggattaggtcattaa 82523  T
Q  245 actcatcc 252  Q
    ||||||||    
T  82524 actcatcc 82531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 82288 - 82381
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaatttac-ttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgatta 100  Q
    |||| |||| || |||||| |||||||||| ||||||   ||||||| |||| |||||||||||||||||| |||||||  |||||| ||||||    
T  82288 tagactattttcttgtttcgcaatccttgtctaatttctattgttccaatatcaaaacttcatctttcgatccttcgctaaatatttttgatta 82381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 3875 - 3632
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||| |||| ||| |||||||||||||| |||| ||||||||||||||| ||||| |    
T  3875 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaa-cttcatctttcgatccttctcttgatatttgtgatgatgaaat 3777  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| |   |  |||  |||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  3776 aacaactattaaacttcacctttcggtccttcgatta-atacttgttatttcattagaaaaacggtgaaatagattagaaaataaatttacataaaatta 3678  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3677 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 3632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 4040 - 3797
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||| |||| ||| |||||||||||||| |||| ||||||||||||||| ||||| |    
T  4040 tagactattctcatgtttcacaatccttgtctaatttcacttgttccaatatcaaa-cttcatctttcgatccttctcttgatatttgtgatgatgaaat 3942  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatta 206  Q
     |||| || ||| | |   || ||| |   |  |||  |||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  3941 aacaactattaaacttcacctttcggtccttcgatta-atacttgttatttcattagaaaaacggtgaaatagattagaaaataaatttacataaaatta 3843  T
Q  207 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3842 gggttcgaggcttggtttgatagggattaggtcattagactcatcc 3797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 22418 - 22661
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    ||||||||||||||||||| | |||||||| |||||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||| |||||    
T  22418 tagattattctcatgtttcgctatccttgtctaatttcacttgttccaatatcaaaacttcatctttcgattcttcgcttgatatttgtgattaagaatt 22517  T
Q  107 cacaagtactaacccttcg-ctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaatt 205  Q
     |||| || ||| | |||| || ||| |  ||   ||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||     
T  22518 aacaactattaaac-ttcgtctttcggtcaattg-tttaatacttgtttttt-attataaaaacggtgaaatagattagaaaatagatttacataaaatc 22614  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||| ||||||||||||||| |||||| | |||||||||||    
T  22615 agggttcgagacttggtttgataggggttaggttaatagactcatcc 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 227
Target Start/End: Original strand, 53923 - 54142
Alignment:
Q  14 attctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaag 112  Q
    ||||||||||||| |||||||||  | |||| |||| |||| |||| |||  ||||||||||||| | |||||||||||||||||| ||||||| |||||    
T  53923 attctcatgtttcgcaatccttgcctgatttcactttttccaatatcaaattttcatctttcgatccatcgcttgatatttgtgatgatgaattaacaag 54022  T
Q  113 t----actaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaattag 207  Q
    |    ||||||||  |  ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  54023 taagtactaacccaacattgtcgctttatgagtttgatacttgttaatttattataaaaacggtgaaattagattagaaagtagatttacataaaattag 54122  T
Q  208 ggttcgaggcttggtttgat 227  Q
    |||||||||||| |||||||    
T  54123 ggttcgaggctttgtttgat 54142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 22104 - 22349
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaatt 106  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||||| |||| |||||| |  || ||| |   |   |||||||||||||| |||||||    
T  22104 tagactattctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaaactccg-ctgtcgctttatgaattgatatttgtgatgatgaatt 22202  T
Q  107 cacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagattagaaaatagatttacataaaatt 205  Q
     |||| |||||||||| | |||||| ||||||| |||| || |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  22203 aacaaatactaaccctccactgtcggtttatgagtttggtatttgttaattcattataaaaacggtgaaattagattagaaagtagatttatataaaatt 22302  T
Q  206 agggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||   || ||||||||||  |||||| ||||||||||| ||||    
T  22303 agggtttatggtttggtttgattaggattacgtcattagacttatcc 22349  T

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Target: scaffold0014 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 168592 - 168356
Alignment:
Q  15 ttctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgattatgaattcacaagt 113  Q
    |||||||||||| |||||||||| |||||| ||||||||| |||| ||| |||||||||| ||| ||| |||||||||||||||| |||||   |||| |    
T  168592 ttctcatgtttcgcaatccttgtctaatttcacttgttccaatatcaaa-cttcatcttttgatcctttgcttgatatttgtgatgatgaaacaacaact 168494  T
Q  114 actaacccttcgc-tgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaatagattagaaaatagatttacataaaattagggttc 212  Q
    | |||  |||| | | ||| |   |  | || |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  168493 attaa-acttcacatttcggtccttcga-ttaatacttgttatttcattagaaaaacggtgaaatagattagaatatagatttacataagattagggttc 168396  T
Q  213 gaggcttggtttgatagggattaggtcattagactcatcc 252  Q
     ||| |||||||||||| ||||||||||||||||||||||    
T  168395 taggtttggtttgatagagattaggtcattagactcatcc 168356  T

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Target: scaffold1559 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 1645 - 1565
Alignment:
Q  172 tgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1645 tgaaatagattagaaaatagatttacataaaataagggttcgaggcttggtttgatagggattaggtcattagactcatcc 1565  T

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Target: scaffold0713 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 6463 - 6623
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaa-tagatta 183  Q
    |||||||||||||| ||||||| |||| ||||| |||| |||  ||||||||||| |||| || ||||||||||||||| |||||||||||| |||||||    
T  6463 ttgatatttgtgatgatgaattaacaaatactatccctccgcgttcgctttatgagtttggtatttgttaattcattatcaaaacggtgaaattagatta 6562  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattag 244  Q
    |||| | |||||| ||||||||||||||   || ||||||||||  |||||| ||||||||    
T  6563 gaaagtggatttatataaaattagggtttatggtttggtttgattaggattacgtcattag 6623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 4488 - 4619
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgctt-gatatttgtgattatgaat 105  Q
    |||| |||||||||||||  |||||||||| |||||| | ||||||  |||| |||||||| |||||||||||||| ||| |||||||||||| ||||||    
T  4488 tagactattctcatgttttgcaatccttgtctaatttcaattgttctaatatcaaaacttcttctttcgatacttcactttgatatttgtgatgatgaat 4587  T
Q  106 tcacaagtactaacccttcgctgtcgctttat 137  Q
    | ||||||||||||||| ||||||||||||||    
T  4588 taacaagtactaaccctccgctgtcgctttat 4619  T

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Target: scaffold0362 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 245
Target Start/End: Original strand, 8979 - 9139
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||||||| ||||||| | || |||||||||| |||  ||||||| ||| |||| || ||||||||||||||||||||| ||||| | ||||||    
T  8979 ttgatatttgtgatgatgaattaaaaaatactaaccctccgcgttcgcttt-tgagtttggtatttgttaattcattataaaaacagtgaatttagatta 9077  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattaga 245  Q
    |||| |||||||| |||||||||| |||   || ||||||||||  |||||| |||||||||    
T  9078 gaaagtagatttatataaaattagagtttatggtttggtttgattaggattacgtcattaga 9139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 21846 - 21768
Alignment:
Q  167 aacggtgaaatagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattaga 245  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  |||||| |||||||||    
T  21846 aacgatgaaatagattagaaaatatatttacataaaattggggttcgaggcttggtttgattaggattatgtcattaga 21768  T

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Target: scaffold0213; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 22004 - 21913
Alignment:
Q  8 tagattattctcatgtttcacaatccttgtgtaattt-acttgttccgatattaaaacttcatctttcgatacttcgcttgatatttgtgat 98  Q
    |||| |||| ||||||||  |||||||||| ||| || ||||||||| ||||| ||||||||||||||||| | ||| || |||||| ||||    
T  22004 tagactattttcatgtttagcaatccttgtctaaattcacttgttccaatatttaaacttcatctttcgatccatcggttaatatttttgat 21913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 1442 - 1285
Alignment:
Q  90 atttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agattagaaaa 188  Q
    ||||| ||| ||||||| |||| |||||||||| | || |||||| |||| ||||||| ||||||||||||  | |||| |||||| | ||||||||||     
T  1442 atttgagatgatgaattaacaattactaaccctccactttcgcttcatgagtttgataattgttaattcatg-tgaaaatggtgaatttagattagaaat 1344  T
Q  189 tagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    |||  |||||||| |||| ||||  ||||||||||||||  |||||| |||||||||||    
T  1343 tagggttacataatattaaggtttaaggcttggtttgattaggattatgtcattagact 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 38773 - 38700
Alignment:
Q  179 gattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||    ||||||||||||||||||||||    
T  38773 gattagaaaatagggttacataaaattagggttctaggcttggtttgaatatgattaggtcattagactcatcc 38700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 8585 - 8752
Alignment:
Q  85 ttgatatttgtgattatgaattcacaagtactaacccttcgctgtcgctttatgaatttgatacttgttaattcattataaaaacggtgaaat-agatta 183  Q
    |||||||||| ||| ||||||| |||| |||||||||| | || |||||||   | ||||||| ||||||||||||  |||||  |||||| | ||||||    
T  8585 ttgatatttgagatgatgaattaacaattactaaccctccactttcgcttttacagtttgataattgttaattcatgttaaaat-ggtgaatttagatta 8683  T
Q  184 gaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||| ||   ||||||||||||||||||  || |||||||||||  |||||| ||||||||||| ||||    
T  8684 gaaactatggttacataaaattagggtttaagacttggtttgattaggattatgtcattagacttatcc 8752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 1880 - 1813
Alignment:
Q  185 aaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||||||||||||||||||   |||||||||||||   |||||||||||||||||||||||    
T  1880 aaaatagatttacataaaattagggtcataggcttggtttgaataggattaggtcattagactcatcc 1813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 1532 - 1607
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||  ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  1532 tagattagaaattagggttacataaaattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 1607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 2909 - 2984
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| |||  ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||| ||||    
T  2909 tagattagaaattagggttacataaaattagggtttaaggcttggtttgattaggattatgtcattagacttatcc 2984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 78080 - 77992
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  ||||||||||||||||||  | ||||||||||||  |||||| ||||||||||| ||||    
T  78080 aaaacggtgaattcagattagaaattagggttacataaaattagggtttaaagcttggtttgattaggattatgtcattagacttatcc 77992  T

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Target: scaffold0278 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 12380 - 12463
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagact 247  Q
    ||||||||||| | |||||||||| |||  |||||||| |||||||||  ||||||||||||||  |||||| |||||||||||    
T  12380 aaaacggtgaatttagattagaaactagggttacataagattagggtttaaggcttggtttgattaggattatgtcattagact 12463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 49948 - 49857
Alignment:
Q  162 ataaaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    |||||||| ||||||| |||||||||| |||||||| ||||||||||||||   || || |||||||  |||||| ||||||||||| ||||    
T  49948 ataaaaacagtgaaattagattagaaagtagatttatataaaattagggtttatggtttagtttgattaggattacgtcattagacttatcc 49857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 3510 - 3465
Alignment:
Q  163 taaaaacggtgaaat-agattagaaaatagatttacataaaattag 207  Q
    |||||||||||| || ||||||||||||||||||| ||||||||||    
T  3510 taaaaacggtgagattagattagaaaatagatttaaataaaattag 3465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 36613 - 36560
Alignment:
Q  177 tagattagaaaatagatttacataaaattagggttcgaggcttggtttgatagg 230  Q
    |||||| ||||||||||  || ||| |||||||||| |||||||||||||||||    
T  36613 tagatttgaaaatagatcgacgtaagattagggttctaggcttggtttgatagg 36560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 3765 - 3678
Alignment:
Q  165 aaaacggtgaaat-agattagaaaatagatttacataaaattagggttcgaggcttggtttgatagggattaggtcattagactcatcc 252  Q
    ||||||||||| | |||||||||| |||  |||||||| |||||||||  || |||||||||||  |||||| ||||||||||| ||||    
T  3765 aaaacggtgaatttagattagaaattagggttacataagattagggttaaag-cttggtttgattaggattatgtcattagacttatcc 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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