View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19915_low_8 (Length: 542)

Name: NF19915_low_8
Description: NF19915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19915_low_8
NF19915_low_8
[»] chr3 (69 HSPs)
chr3 (17-255)||(30154635-30154873)
chr3 (16-152)||(30050017-30050152)
chr3 (16-152)||(30072887-30073022)
chr3 (16-154)||(30173907-30174037)
chr3 (19-115)||(30069301-30069393)
chr3 (388-479)||(30155000-30155091)
chr3 (16-154)||(30132539-30132669)
chr3 (16-154)||(30143486-30143616)
chr3 (16-92)||(30086687-30086763)
chr3 (16-143)||(30137357-30137476)
chr3 (16-143)||(30146908-30147027)
chr3 (14-92)||(30056486-30056564)
chr3 (16-98)||(30458791-30458873)
chr3 (488-542)||(35368621-35368675)
chr3 (488-542)||(50745559-50745613)
chr3 (159-249)||(30086834-30086923)
chr3 (488-542)||(29846898-29846952)
chr3 (488-542)||(49361842-49361896)
chr3 (489-542)||(29057659-29057712)
chr3 (30-114)||(29920423-29920505)
chr3 (30-114)||(29927332-29927414)
chr3 (30-114)||(29969576-29969658)
chr3 (30-114)||(29976486-29976568)
chr3 (431-479)||(30458473-30458521)
chr3 (159-249)||(30056650-30056738)
chr3 (175-249)||(30074726-30074798)
chr3 (487-542)||(48490520-48490575)
chr3 (33-98)||(25481370-25481438)
chr3 (20-98)||(30081908-30081986)
chr3 (159-234)||(30073063-30073137)
chr3 (489-542)||(43149350-43149403)
chr3 (487-542)||(38957519-38957573)
chr3 (489-542)||(47484290-47484344)
chr3 (488-542)||(48117346-48117400)
chr3 (489-542)||(26548781-26548834)
chr3 (159-249)||(30069455-30069544)
chr3 (490-541)||(51487760-51487809)
chr3 (487-542)||(54007473-54007528)
chr3 (487-542)||(47683799-47683854)
chr3 (511-542)||(48205078-48205109)
chr3 (487-538)||(50146486-50146537)
chr3 (488-526)||(9159070-9159108)
chr3 (488-542)||(19149001-19149054)
chr3 (488-542)||(23906994-23907048)
chr3 (124-154)||(30086765-30086795)
chr3 (488-526)||(32151887-32151925)
chr3 (488-526)||(39350606-39350644)
chr3 (488-542)||(43220148-43220202)
chr3 (488-542)||(46952948-46953002)
chr3 (489-542)||(3484770-3484823)
chr3 (511-540)||(7351647-7351676)
chr3 (489-542)||(9719459-9719512)
chr3 (489-542)||(9753167-9753220)
chr3 (489-542)||(9753230-9753283)
chr3 (489-542)||(23868985-23869038)
chr3 (489-522)||(30664503-30664536)
chr3 (513-542)||(38471677-38471706)
chr3 (513-542)||(38944148-38944177)
chr3 (489-538)||(45205288-45205337)
chr3 (489-526)||(48205045-48205082)
chr3 (487-540)||(50876371-50876424)
chr3 (488-542)||(21481777-21481828)
chr3 (159-249)||(30050193-30050282)
chr3 (159-245)||(30082070-30082155)
chr3 (194-249)||(30458631-30458684)
chr3 (490-542)||(35554122-35554174)
chr3 (488-516)||(38363265-38363293)
chr3 (487-515)||(51231067-51231095)
chr3 (488-524)||(53021188-53021224)
[»] chr4 (53 HSPs)
chr4 (490-542)||(9095949-9096001)
chr4 (488-542)||(4106053-4106106)
chr4 (488-538)||(31413797-31413847)
chr4 (489-542)||(24310528-24310581)
chr4 (489-542)||(37731926-37731979)
chr4 (488-542)||(1868900-1868954)
chr4 (488-542)||(21766557-21766611)
chr4 (488-542)||(45678273-45678327)
chr4 (489-542)||(28899222-28899275)
chr4 (487-542)||(22007831-22007884)
chr4 (490-542)||(46791998-46792050)
chr4 (487-542)||(9827990-9828045)
chr4 (489-532)||(36871185-36871228)
chr4 (487-542)||(41010176-41010231)
chr4 (488-526)||(22893868-22893906)
chr4 (488-526)||(22945536-22945574)
chr4 (488-526)||(29577470-29577508)
chr4 (488-542)||(46686244-46686297)
chr4 (489-542)||(4974111-4974164)
chr4 (489-538)||(7795025-7795074)
chr4 (489-526)||(36110134-36110171)
chr4 (489-526)||(36488358-36488395)
chr4 (488-540)||(18568455-18568507)
chr4 (490-542)||(54848150-54848202)
chr4 (487-542)||(7161532-7161586)
chr4 (487-542)||(41347474-41347528)
chr4 (487-526)||(43864032-43864071)
chr4 (487-526)||(48791631-48791670)
chr4 (487-542)||(50980600-50980655)
chr4 (487-526)||(51107475-51107514)
chr4 (488-542)||(33776907-33776960)
chr4 (488-542)||(37022271-37022325)
chr4 (488-542)||(42490919-42490973)
chr4 (488-522)||(50291281-50291315)
chr4 (489-542)||(1580290-1580342)
chr4 (513-542)||(4100762-4100791)
chr4 (487-516)||(8481665-8481694)
chr4 (489-542)||(8848711-8848764)
chr4 (489-542)||(15515795-15515848)
chr4 (489-522)||(43511685-43511718)
chr4 (489-526)||(45176769-45176806)
chr4 (489-542)||(49906143-49906195)
chr4 (489-542)||(50608631-50608683)
chr4 (490-526)||(336842-336877)
chr4 (490-542)||(5386385-5386437)
chr4 (513-541)||(7037492-7037520)
chr4 (487-519)||(8485575-8485607)
chr4 (488-516)||(20760254-20760282)
chr4 (488-516)||(20766645-20766673)
chr4 (488-536)||(27384186-27384234)
chr4 (498-542)||(29891865-29891909)
chr4 (488-540)||(35500808-35500860)
chr4 (490-526)||(38960694-38960730)
[»] chr8 (29 HSPs)
chr8 (489-542)||(6243045-6243098)
chr8 (489-542)||(41776186-41776239)
chr8 (487-542)||(7010683-7010738)
chr8 (488-542)||(38939196-38939250)
chr8 (489-542)||(37471654-37471707)
chr8 (488-539)||(14233654-14233705)
chr8 (488-542)||(13924021-13924075)
chr8 (488-542)||(39884495-39884549)
chr8 (488-542)||(43590704-43590758)
chr8 (488-541)||(40413357-40413410)
chr8 (491-539)||(8233506-8233554)
chr8 (489-541)||(35345971-35346023)
chr8 (488-542)||(9963695-9963750)
chr8 (489-540)||(36675336-36675387)
chr8 (488-542)||(25430656-25430710)
chr8 (488-542)||(37392135-37392189)
chr8 (492-542)||(42768129-42768179)
chr8 (489-542)||(23265361-23265414)
chr8 (487-542)||(45405826-45405881)
chr8 (492-542)||(14710900-14710950)
chr8 (488-542)||(29107994-29108048)
chr8 (489-542)||(38174240-38174294)
chr8 (16-57)||(7949999-7950040)
chr8 (489-542)||(32777896-32777949)
chr8 (489-542)||(45081398-45081451)
chr8 (492-540)||(11138910-11138958)
chr8 (487-519)||(18549977-18550009)
chr8 (487-542)||(37294605-37294658)
chr8 (490-542)||(39211054-39211106)
[»] chr7 (34 HSPs)
chr7 (489-542)||(33465046-33465099)
chr7 (487-542)||(49142524-49142579)
chr7 (489-538)||(37848631-37848680)
chr7 (488-542)||(5905972-5906026)
chr7 (488-542)||(21589932-21589986)
chr7 (492-542)||(29923685-29923735)
chr7 (489-542)||(27866544-27866597)
chr7 (487-542)||(24380728-24380783)
chr7 (488-542)||(40108134-40108188)
chr7 (488-542)||(43942648-43942701)
chr7 (489-542)||(25272602-25272655)
chr7 (490-542)||(38547297-38547349)
chr7 (487-526)||(1709282-1709321)
chr7 (487-542)||(27570353-27570408)
chr7 (487-542)||(45420067-45420122)
chr7 (488-542)||(2323303-2323357)
chr7 (488-542)||(19510364-19510418)
chr7 (488-522)||(27704434-27704468)
chr7 (488-526)||(41538481-41538519)
chr7 (488-542)||(41985107-41985161)
chr7 (488-526)||(42552898-42552936)
chr7 (488-542)||(43213318-43213372)
chr7 (489-542)||(8742394-8742447)
chr7 (489-526)||(11325898-11325934)
chr7 (488-541)||(26749016-26749068)
chr7 (489-522)||(40207838-40207871)
chr7 (488-517)||(40231748-40231777)
chr7 (488-516)||(2849565-2849593)
chr7 (490-526)||(17039158-17039194)
chr7 (18-98)||(20459984-20460064)
chr7 (490-526)||(23034347-23034383)
chr7 (490-542)||(24044754-24044806)
chr7 (488-536)||(27473103-27473150)
chr7 (490-526)||(35212989-35213025)
[»] chr5 (23 HSPs)
chr5 (489-542)||(8442170-8442223)
chr5 (488-542)||(9957208-9957262)
chr5 (488-542)||(11878439-11878493)
chr5 (488-542)||(32732125-32732179)
chr5 (494-542)||(7080546-7080594)
chr5 (487-542)||(43153067-43153122)
chr5 (488-542)||(12203157-12203211)
chr5 (488-537)||(24486895-24486944)
chr5 (488-531)||(38919862-38919905)
chr5 (487-542)||(40201127-40201182)
chr5 (488-538)||(3849509-3849559)
chr5 (488-542)||(4434481-4434535)
chr5 (488-542)||(14206399-14206453)
chr5 (489-532)||(38387610-38387653)
chr5 (488-542)||(14923082-14923135)
chr5 (488-522)||(24330020-24330054)
chr5 (488-526)||(34693250-34693288)
chr5 (488-526)||(35474525-35474563)
chr5 (487-516)||(11881031-11881060)
chr5 (487-516)||(27005523-27005552)
chr5 (513-542)||(38010907-38010936)
chr5 (490-526)||(30103485-30103521)
chr5 (490-542)||(33910095-33910147)
[»] chr2 (45 HSPs)
chr2 (487-542)||(22296136-22296191)
chr2 (488-542)||(6885487-6885541)
chr2 (488-538)||(40115525-40115575)
chr2 (488-542)||(42607537-42607591)
chr2 (491-540)||(43076312-43076361)
chr2 (489-542)||(24727426-24727479)
chr2 (488-537)||(27329121-27329170)
chr2 (490-542)||(38777903-38777955)
chr2 (488-542)||(13453780-13453833)
chr2 (488-542)||(13881105-13881159)
chr2 (488-542)||(14021230-14021284)
chr2 (488-542)||(38724325-38724379)
chr2 (487-540)||(9647142-9647194)
chr2 (487-540)||(10550468-10550521)
chr2 (492-541)||(11828828-11828877)
chr2 (489-542)||(27538923-27538976)
chr2 (497-542)||(34215284-34215329)
chr2 (489-542)||(45202139-45202192)
chr2 (490-542)||(33583229-33583280)
chr2 (489-536)||(10216864-10216911)
chr2 (487-542)||(15141471-15141526)
chr2 (487-542)||(22353182-22353237)
chr2 (489-542)||(23141367-23141417)
chr2 (489-542)||(23553157-23553207)
chr2 (490-542)||(24491684-24491738)
chr2 (488-534)||(694279-694325)
chr2 (488-542)||(4138192-4138246)
chr2 (488-542)||(10711735-10711789)
chr2 (492-542)||(30996742-30996792)
chr2 (488-522)||(34141441-34141475)
chr2 (492-542)||(38598356-38598406)
chr2 (488-542)||(40700206-40700260)
chr2 (487-540)||(285478-285531)
chr2 (489-526)||(7664103-7664140)
chr2 (489-542)||(8757555-8757608)
chr2 (489-526)||(17917389-17917426)
chr2 (487-542)||(35008108-35008160)
chr2 (489-542)||(35792646-35792699)
chr2 (488-536)||(304996-305044)
chr2 (488-542)||(1096350-1096401)
chr2 (488-540)||(9432013-9432065)
chr2 (487-519)||(12256899-12256931)
chr2 (490-542)||(32975070-32975122)
chr2 (490-526)||(37076658-37076694)
chr2 (488-542)||(43205106-43205157)
[»] chr6 (25 HSPs)
chr6 (489-542)||(9395344-9395397)
chr6 (489-542)||(32135438-32135491)
chr6 (489-542)||(32644623-32644676)
chr6 (29-98)||(35162559-35162628)
chr6 (488-539)||(2165310-2165361)
chr6 (488-539)||(2176943-2176994)
chr6 (488-542)||(17442832-17442886)
chr6 (488-542)||(25561947-25562001)
chr6 (488-542)||(25567497-25567551)
chr6 (488-542)||(26101461-26101515)
chr6 (26-91)||(6803507-6803572)
chr6 (489-538)||(16121163-16121212)
chr6 (511-542)||(4922979-4923010)
chr6 (487-522)||(34792020-34792055)
chr6 (488-542)||(1196057-1196111)
chr6 (488-542)||(12441537-12441591)
chr6 (492-538)||(31413539-31413585)
chr6 (489-538)||(2163702-2163751)
chr6 (489-538)||(2175335-2175384)
chr6 (489-526)||(6256435-6256472)
chr6 (33-94)||(12837942-12838003)
chr6 (488-541)||(24437454-24437507)
chr6 (490-542)||(16865565-16865617)
chr6 (487-515)||(26396520-26396548)
chr6 (18-98)||(30636195-30636275)
[»] chr1 (37 HSPs)
chr1 (488-542)||(11121491-11121545)
chr1 (488-542)||(21446225-21446279)
chr1 (488-542)||(30414874-30414928)
chr1 (489-542)||(16252766-16252819)
chr1 (490-542)||(50460719-50460771)
chr1 (495-542)||(1603011-1603058)
chr1 (487-526)||(22674710-22674749)
chr1 (488-542)||(46903480-46903534)
chr1 (488-542)||(50797790-50797844)
chr1 (489-538)||(35030773-35030822)
chr1 (489-542)||(37690429-37690482)
chr1 (489-526)||(43105105-43105142)
chr1 (489-542)||(47398458-47398511)
chr1 (487-526)||(36794613-36794652)
chr1 (511-542)||(40118722-40118753)
chr1 (487-542)||(43757597-43757652)
chr1 (489-542)||(48689570-48689620)
chr1 (488-526)||(1100216-1100254)
chr1 (488-542)||(19427520-19427574)
chr1 (488-522)||(21854502-21854536)
chr1 (488-542)||(40596061-40596115)
chr1 (488-542)||(45272167-45272221)
chr1 (488-542)||(48325785-48325839)
chr1 (489-542)||(16836122-16836175)
chr1 (489-518)||(25239277-25239306)
chr1 (489-526)||(31244767-31244804)
chr1 (489-526)||(40118749-40118786)
chr1 (489-542)||(40139126-40139179)
chr1 (489-542)||(41507201-41507254)
chr1 (492-533)||(42412173-42412214)
chr1 (488-540)||(4154591-4154643)
chr1 (490-522)||(5574297-5574329)
chr1 (488-516)||(16987446-16987474)
chr1 (487-515)||(26101392-26101420)
chr1 (488-516)||(35883651-35883679)
chr1 (488-536)||(48028536-48028584)
chr1 (488-540)||(48103398-48103449)
[»] scaffold0286 (2 HSPs)
scaffold0286 (488-539)||(17048-17099)
scaffold0286 (489-538)||(18658-18707)
[»] scaffold0054 (1 HSPs)
scaffold0054 (488-542)||(31607-31661)
[»] scaffold0172 (1 HSPs)
scaffold0172 (491-532)||(9296-9337)
[»] scaffold0112 (1 HSPs)
scaffold0112 (31-115)||(26178-26262)
[»] scaffold0024 (1 HSPs)
scaffold0024 (492-526)||(48657-48691)


Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 17 - 255
Target Start/End: Original strand, 30154635 - 30154873
Alignment:
Q  17 gaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaatt 116  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30154635 gaaagatgattgaaatacatacagaatgcggcaagcaagaagacagcaaaaggagcaagcttaacataagccattgattgattgatcaaaagaaagaatt 30154734  T
Q  117 aaccagctacaatatactattgtttgttaattatgagcatagcaatttataaacaaaataatgtttttgtctgatccatggatcctgaaatattgcctta 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  30154735 aaccagctacaatatactattgtttgttaattatgagcatagcaatttatagataaaataatgtttttgtctgatccatgtatcctgaaatattgcctta 30154834  T
Q  217 ttaaattcagaagcgaggagcacgaggttaattgcttat 255  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  30154835 ttaaattcagaagtgaggaacacgaggttaattgcttat 30154873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 30050017 - 30050152
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    |||||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||     
T  30050017 agaaagatgattgaaatatataccgaatgcagcaagcaagaagacagcaaaagaagcaagcttaacataagccattgattgattgatcaaaagaaagaa- 30050115  T
Q  116 taaccagctacaatatactattgtttgttaattatga 152  Q
      | | |||||||||||||||||||||||||||||||    
T  30050116 ccagctgctacaatatactattgtttgttaattatga 30050152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 30072887 - 30073022
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    |||||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||     
T  30072887 agaaagatgattgaaatatataccgaatgcagcaagcaagaagacagcaaaagaagcaagcttaacataagccattgattgattgatcaaaagaaagaa- 30072985  T
Q  116 taaccagctacaatatactattgtttgttaattatga 152  Q
      | | |||||||||||||||||||||||||||||||    
T  30072986 ccagctgctacaatatactattgtttgttaattatga 30073022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 30173907 - 30174037
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||| |||||||||||    |||||||||||||       
T  30173907 agaaagatgattgaaatacatacagaatgcagcaagcaagaagatagcaaaaggagctagcttaacattagccattgatt----gatcaaaagaaag--- 30173999  T
Q  116 taaccagctacaatatactattgtttgttaattatgagc 154  Q
     ||||| ||| |||||||||||||||||||||| |||||    
T  30174000 -aaccatctaaaatatactattgtttgttaattctgagc 30174037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 30069301 - 30069393
Alignment:
Q  19 aagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    |||||||||||||    
T  30069301 aagatgattgaaatacatacagaatgcggcaagcaagaagacagcaaaaggagctagcttaacataagccattgattgat----caaaagaaagaat 30069393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 388 - 479
Target Start/End: Original strand, 30155000 - 30155091
Alignment:
Q  388 tcttctataatgctaatataactaaggttaaacaaacacaaaatctgtacaaggatcgactgctactgcaataactcgtgatttaacttcat 479  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  30155000 tcttctataatgctaatataactaaggttaatcaaacacaaactctgtacaaggatagactgctactgcaataacccgtgatttaaattcat 30155091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 30132539 - 30132669
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    |||||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||    | |||| |  ||||||||||||       
T  30132539 agaaagatcattgaaatacatacagaatgcggcaagcataaagacagcaaaaggagcaagcttaacataag----tcattgttctatcaaaagaaag--- 30132631  T
Q  116 taaccagctacaatatactattgtttgttaattatgagc 154  Q
     |||||||||||| |||||||||||||||||||||||||    
T  30132632 -aaccagctacaaaatactattgtttgttaattatgagc 30132669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 30143486 - 30143616
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||    | |||| |  ||||||||||||       
T  30143486 agaaagatggttgaaatacatacagaatgcggcaagcaagaagacagccaaaggagctagcttaacataag----tcattgttctatcaaaagaaag--- 30143578  T
Q  116 taaccagctacaatatactattgtttgttaattatgagc 154  Q
     |||||||||||| |||||||||||||||||||||||||    
T  30143579 -aaccagctacaaaatactattgtttgttaattatgagc 30143616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 30086687 - 30086763
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattg 92  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  30086687 agaaagatgattgaaatacatacagaaagcagcaagcaagaagacagcaaaaggagcaatcttaacataagccattg 30086763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 30137357 - 30137476
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||    | |||| |  ||||||||||||       
T  30137357 agaaagatggttgaaatacatacagaatgcggcaagcaagaagacagccaaaggagctagcttaacataag----tcattgttctatcaaaagaaag--- 30137449  T
Q  116 taaccagctacaatatactattgtttgt 143  Q
     |||||||||||| ||||||||||||||    
T  30137450 -aaccagctacaaaatactattgtttgt 30137476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 30146908 - 30147027
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||    | |||| |  ||||||||||||       
T  30146908 agaaagatggttgaaatacatacagaatgcggcaagcaagaagacagccaaaggagctagcttaacataag----tcattgttctatcaaaagaaag--- 30147000  T
Q  116 taaccagctacaatatactattgtttgt 143  Q
     |||||||||||| ||||||||||||||    
T  30147001 -aaccagctacaaaatactattgtttgt 30147027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 30056486 - 30056564
Alignment:
Q  14 tcagaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattg 92  Q
    |||||||||||||||||||||  ||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||    
T  30056486 tcagaaagatgattgaaatacgcacagaatgcagcaagcaagaagacagcaaaaggagcgagcttaacattagccattg 30056564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 30458873 - 30458791
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgat 98  Q
    |||||||| ||||||||||||||||||||| |||||||||| | ||||||||| ||| |||||||||| || ||||| |||||    
T  30458873 agaaagataattgaaatacatacagaatgcagcaagcaagaggacagcaaaagaagctagcttaacattagacattggttgat 30458791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 35368621 - 35368675
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactcaca 35368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 50745559 - 50745613
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  50745559 agagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcaca 50745613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 30086834 - 30086923
Alignment:
Q  159 caatttataaacaaaat-aatgtttttgtctgatccatggatcctgaaatattgccttattaaattcagaagcgaggagcacgaggttaatt 249  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||| ||||  || ||||||||||||||||||||||  |||||||||||||    
T  30086834 caatttatagacaaaattaatgtttttgccttatccatggatcctcaaat--tgtcttattaaattcagaagcgagggacacgaggttaatt 30086923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 29846952 - 29846898
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  29846952 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 29846898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 49361896 - 49361842
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  49361896 agagaaatgatatttgtacaatcatttttgtacaactttttctctcatactcaca 49361842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 29057659 - 29057712
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  29057659 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 29057712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 29920505 - 29920423
Alignment:
Q  30 aatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaa 114  Q
    |||||||||||||||| ||||| |||||| |||| ||||| |||||||||||| |||||||||  | || |||||||||||||||    
T  29920505 aatacatacagaatgcagcaagtaagaagacagcgaaaggggcaagcttaacagaagccattg--taattgatcaaaagaaagaa 29920423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 29927332 - 29927414
Alignment:
Q  30 aatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaa 114  Q
    |||||||||||||||| ||||| |||||| |||| ||||| |||||||||||| |||||||||  | || |||||||||||||||    
T  29927332 aatacatacagaatgcagcaagtaagaagacagcgaaaggggcaagcttaacagaagccattg--taattgatcaaaagaaagaa 29927414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 29969658 - 29969576
Alignment:
Q  30 aatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaa 114  Q
    |||||||||||||||| ||||| |||||| |||| ||||| |||||||||||| |||||||||  | || |||||||||||||||    
T  29969658 aatacatacagaatgcagcaagtaagaagacagcgaaaggggcaagcttaacagaagccattg--taattgatcaaaagaaagaa 29969576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 29976486 - 29976568
Alignment:
Q  30 aatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaa 114  Q
    |||||||||||||||| ||||| |||||| |||| ||||| |||||||||||| |||||||||  | || |||||||||||||||    
T  29976486 aatacatacagaatgcagcaagtaagaagacagcgaaaggggcaagcttaacagaagccattg--taattgatcaaaagaaagaa 29976568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 431 - 479
Target Start/End: Complemental strand, 30458521 - 30458473
Alignment:
Q  431 tctgtacaaggatcgactgctactgcaataactcgtgatttaacttcat 479  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  30458521 tctgtacaaggatcgactactactacaataactcgtgatttaacttcat 30458473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 30056650 - 30056738
Alignment:
Q  159 caatttataaacaaaataatgtttttgtctgatccatggatcctgaaatattgccttattaaattcagaagcgaggagcacgaggttaatt 249  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||||  |||| | ||||||||||| ||| ||||  ||||| |||||||    
T  30056650 caatttatagacaaaataatgtttttgccttatccatggatcctgaa--attgtcctattaaattcaaaagtgagggacacgaagttaatt 30056738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 30074726 - 30074798
Alignment:
Q  175 taatgtttttgtctgatccatggatcctgaaatattgccttattaaattcagaagcgaggagcacgaggttaatt 249  Q
    ||||||||||| || ||||||||||||| ||||  || ||||||||||||||||||||||  |||||||||||||    
T  30074726 taatgtttttgccttatccatggatcctcaaat--tgtcttattaaattcagaagcgagggacacgaggttaatt 30074798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 48490575 - 48490520
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||||||||    
T  48490575 tagagaaatgatatttgtacaaccacttttgtacaactttctctctcatactcaca 48490520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 25481438 - 25481370
Alignment:
Q  33 acatacagaatgcggcaagcaagaag---gcagcaaaaggagcaagcttaacataagccattgattgat 98  Q
    |||||||||| |||||||| ||||||   ||||||||||||||||||||||||| |||||||| |||||    
T  25481438 acatacagaacgcggcaagtaagaagacagcagcaaaaggagcaagcttaacatgagccattgtttgat 25481370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 30081908 - 30081986
Alignment:
Q  20 agatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgat 98  Q
    |||||||||||||||||||||||||||| |||||| ||| |||| || || |  |||||||||| |||||||| |||||    
T  30081908 agatgattgaaatacatacagaatgcggtaagcaaaaagacagcgaacggggatagcttaacattagccattggttgat 30081986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 30073063 - 30073137
Alignment:
Q  159 caatttataaacaaaat-aatgtttttgtctgatccatggatcctgaaatattgccttattaaattcagaagcgagg 234  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||| ||||  || ||||||||||||||||||||||    
T  30073063 caatttatagacaaaattaatgtttttgccttatccatggatcctcaaat--tgtcttattaaattcagaagcgagg 30073137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 43149403 - 43149350
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||| ||||||||||| ||||||||||||| ||||| |||||||||||||    
T  43149403 gagaaatgttatttgtacaactatttttgtacaactttctttctcatactcaca 43149350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 38957573 - 38957519
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| |||||||| |||| ||| |||||||||||||||    
T  38957573 tagagaaatgatatttgtacaactatttttg-acaactttttctctcatactcaca 38957519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 47484290 - 47484344
Alignment:
Q  489 gagaaatgatatttgtacaattatttt-tgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  47484290 gagaaatgatatttgtacaaccattttttgtacaattttttctctcatactcaca 47484344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 48117346 - 48117400
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||| |||||  |||||||||||| ||||||| |||||||||||    
T  48117346 agagaaatgatatttatacaaccatttttgtacaactttctctttcatactcaca 48117400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 26548834 - 26548781
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||| ||||||| |||| |||||| |||||| |||||||||||||||||||    
T  26548834 gagaaataatatttggacaactattttggtacaactttctctctcatactcaca 26548781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 30069455 - 30069544
Alignment:
Q  159 caatttataaacaaaat-aatgtttttgtctgatccatggatcctgaaatattgccttattaaattcagaagcgaggagcacgaggttaatt 249  Q
    ||||||||| ||||||| |||||||||  || ||||||||||||| ||||  || |||||||||||||  |||||||  |||||||||||||    
T  30069455 caatttatagacaaaattaatgtttttcccttatccatggatcctcaaat--tgtcttattaaattcaacagcgagggacacgaggttaatt 30069544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 541
Target Start/End: Original strand, 51487760 - 51487809
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 541  Q
    ||||||||||||||||||  |||||||  |||||||||||||||||||||||    
T  51487760 agaaatgatatttgtaca--tattttttgacaattttctctctcatactcac 51487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 54007473 - 54007528
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgta-caattttctctctcatactcaca 542  Q
    |||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||    
T  54007473 tagagaaatgatatttctacaactatttt-gtagcaattttctctctcatactcaca 54007528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 47683799 - 47683854
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  47683799 tagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 47683854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 542
Target Start/End: Original strand, 48205078 - 48205109
Alignment:
Q  511 atttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||||||    
T  48205078 atttttgtacaattttctctctcatactcaca 48205109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 538
Target Start/End: Original strand, 50146486 - 50146537
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||| ||| |||||   ||||||||||||||||||||    
T  50146486 tagagaaatgatatttgtataatcattttgtgacaattttctctctcatact 50146537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Complemental strand, 9159108 - 9159070
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  9159108 agagaaatgatatttgtacaaccatttttgtacaatttt 9159070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 19149001 - 19149054
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| ||||| |||||| || || |||||||||||||||||||    
T  19149001 agagaaatgatatttgaacaatcattttt-tataactttctctctcatactcaca 19149054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 23907048 - 23906994
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||| |  ||||| |||||||||||||||||||    
T  23907048 agagaaatgatatttgtacaaccattatgttacaactttctctctcatactcaca 23906994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 154
Target Start/End: Original strand, 30086765 - 30086795
Alignment:
Q  124 tacaatatactattgtttgttaattatgagc 154  Q
    |||||||||||||||||||||||||||||||    
T  30086765 tacaatatactattgtttgttaattatgagc 30086795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Original strand, 32151887 - 32151925
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  32151887 agagaaatgatatgtgtacaattatttttgtataatttt 32151925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Complemental strand, 39350644 - 39350606
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  39350644 agagaaatgatatttgtacaattattttttaacaatttt 39350606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 43220202 - 43220148
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||| |||||||| |||||  ||||||||| || |||||||||||||||||||    
T  43220202 agagaattgatatttttacaaccatttttgtaaaactttctctctcatactcaca 43220148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 46952948 - 46953002
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||||  | || |||||||||||||||||||    
T  46952948 agagaaatgatatttgtacaaccattttttgataactttctctctcatactcaca 46953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 3484770 - 3484823
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| |||  |||||  ||||| |||||||||||||||||||    
T  3484770 gagaaatgatatttgtccaaccattttattacaactttctctctcatactcaca 3484823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 540
Target Start/End: Complemental strand, 7351676 - 7351647
Alignment:
Q  511 atttttgtacaattttctctctcatactca 540  Q
    ||||||||||||||||||||||||||||||    
T  7351676 atttttgtacaattttctctctcatactca 7351647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 9719512 - 9719459
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  | ||||  ||||||||| ||||||||||||||    
T  9719512 gagaaatgatatttgtacaaccactttttgacaattttccctctcatactcaca 9719459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 9753167 - 9753220
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||||| |||  |||| ||||||| ||||| |||||    
T  9753167 gagaaatgatatttgtacaattatattttgacaactttctctttcatattcaca 9753220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 9753230 - 9753283
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||| ||||| |||||   |||||||| |||||||||||||||    
T  9753230 gagaaatgatatttgaacaatcattttgtgacaattttatctctcatactcaca 9753283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 23869038 - 23868985
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||   |||||||||||| |||||||||||    
T  23869038 gagaaatgatatttgtacaaccattttataacaattttctctttcatactcaca 23868985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 522
Target Start/End: Original strand, 30664503 - 30664536
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaa 522  Q
    ||||||||||||||||||||| ||||||||||||    
T  30664503 gagaaatgatatttgtacaatcatttttgtacaa 30664536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Original strand, 38471677 - 38471706
Alignment:
Q  513 ttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||||    
T  38471677 ttttgtacaattttctctctcatactcaca 38471706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 38944177 - 38944148
Alignment:
Q  513 ttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||||    
T  38944177 ttttgtacaattttctctctcatactcaca 38944148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 538
Target Start/End: Original strand, 45205288 - 45205337
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    |||||||||||||||||||| ||||||   |||||||| |||||||||||    
T  45205288 gagaaatgatatttgtacaactattttgtgacaattttttctctcatact 45205337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 526
Target Start/End: Original strand, 48205045 - 48205082
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  48205045 gagaaatgatatttgtacaatcatttttgtataatttt 48205082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 50876424 - 50876371
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    ||||||||||||||||||||||  ||||||  |||| ||||||| |||||||||    
T  50876424 tagagaaatgatatttgtacaacaattttttgacaactttctctatcatactca 50876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 21481777 - 21481828
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| |   ||||||||| ||| |||||||||||||||    
T  21481777 agagaaatgatatttgtacaact---tttgtacaactttttctctcatactcaca 21481828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 30050193 - 30050282
Alignment:
Q  159 caatttataaacaaaat-aatgtttttgtctgatccatggatcctgaaatattgccttattaaattcagaagcgaggagcacgaggttaatt 249  Q
    ||||||||| ||||||| |||||||||| || ||||||||||| | ||||  ||  ||||||||||||  |||||||  |||||||||||||    
T  30050193 caatttatagacaaaattaatgtttttgccttatccatggatcttcaaat--tgttttattaaattcaacagcgagggacacgaggttaatt 30050282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 30082070 - 30082155
Alignment:
Q  159 caatttataaacaaaat-aatgtttttgtctgatccatggatcctgaaatattgccttattaaattcagaagcgaggagcacgaggtt 245  Q
    ||||||||| ||||||| |||||||||| || |||  |||||||| ||||  || ||||||| ||||||||||||||  |||||||||    
T  30082070 caatttatagacaaaattaatgtttttgccttatcagtggatcctcaaat--tgtcttattatattcagaagcgagggacacgaggtt 30082155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 30458684 - 30458631
Alignment:
Q  194 atggatcctgaaatattgccttattaaattcagaagcgaggagcacgaggttaatt 249  Q
    ||||||||||||||  || ||||||||||||| ||||||||  |||||||||||||    
T  30458684 atggatcctgaaat--tgtcttattaaattcaaaagcgagggacacgaggttaatt 30458631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 35554174 - 35554122
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| ||| | ||||  |||| |||||||||||||||||||    
T  35554174 agaaatgatatttgtataatcactttttgacaactttctctctcatactcaca 35554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 516
Target Start/End: Complemental strand, 38363293 - 38363265
Alignment:
Q  488 agagaaatgatatttgtacaattattttt 516  Q
    |||||||||||||||||||||||||||||    
T  38363293 agagaaatgatatttgtacaattattttt 38363265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 515
Target Start/End: Complemental strand, 51231095 - 51231067
Alignment:
Q  487 tagagaaatgatatttgtacaattatttt 515  Q
    |||||||||||||||||||||||||||||    
T  51231095 tagagaaatgatatttgtacaattatttt 51231067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 524
Target Start/End: Original strand, 53021188 - 53021224
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatt 524  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  53021188 agagaaatgatatttgtacaactatttttgtgcaatt 53021224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 9e-19; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 9095949 - 9096001
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9095949 agaaatgttatttgtacaattatttttgtacaattttctctctcatactcaca 9096001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 4106053 - 4106106
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  4106053 agagaaatgatatttgtacaatttttttt-tacaattttctctctcatactcaca 4106106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 538
Target Start/End: Complemental strand, 31413847 - 31413797
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  31413847 agagaaatgatatttgtacaactatttttgtacaactttctctctcatact 31413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 24310581 - 24310528
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  24310581 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 24310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 37731926 - 37731979
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaactttctctctcatactcaca 37731979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 1868954 - 1868900
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  1868954 agagaaatgatatttgtacaaccatttttgtacaactttctatctcatactcaca 1868900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 21766557 - 21766611
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  21766557 agagaaatgatatttgtataatcatttttgtacaaccttctctctcatactcaca 21766611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 45678273 - 45678327
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||    
T  45678273 agagaaatgttatttgtacaatcatttttgtacaattttatctctcatacccaca 45678327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 28899275 - 28899222
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||    
T  28899275 gagaaatgatatttgtacaatcattttggtacaactttctctctcatattcaca 28899222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 22007831 - 22007884
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||||| ||||   |||||||||||||||||    
T  22007831 tagagaaatgatatttgtacaattatttttggacaa--ctctctctcatactcaca 22007884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 46792050 - 46791998
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||| |||  |||||||||||||||||| |||||||||||||    
T  46792050 agaaatgatatttgtgcaacaatttttgtacaattttctttctcatactcaca 46791998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 9828045 - 9827990
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  ||||| |||||| ||||||||||| |||||||    
T  9828045 tagagaaatgatatttgtacaaccattttagtacaactttctctctcacactcaca 9827990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 532
Target Start/End: Complemental strand, 36871228 - 36871185
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctct 532  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  36871228 gagaaatgatatttgtacaactatttttgtacaactttctctct 36871185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 41010231 - 41010176
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| |||||| |||||||||||||| | ||||| |||||||||    
T  41010231 tagagaaatgatatttatacaatcatttttgtacaattctttctcttatactcaca 41010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 526
Target Start/End: Original strand, 22893868 - 22893906
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22893868 agagaaatgatatttgtacaatcatttttgtacaatttt 22893906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 526
Target Start/End: Original strand, 22945536 - 22945574
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22945536 agagaaatgatatttgtacaatcatttttgtacaatttt 22945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 526
Target Start/End: Complemental strand, 29577508 - 29577470
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  29577508 agagaaatgatatttgtacaactatttttgtacaatttt 29577470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 46686244 - 46686297
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||| |||||| |||||||||||||||||||    
T  46686244 agagaaatgatatttgtacaaccatttt-gtacaactttctctctcatactcaca 46686297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 4974111 - 4974164
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||||| ||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctcatacccaca 4974164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 538
Target Start/End: Original strand, 7795025 - 7795074
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||||||    
T  7795025 gagaaatgatatttgtacaaccatttttgtacaactttctttctcatact 7795074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 526
Target Start/End: Original strand, 36110134 - 36110171
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||| |||||||||||||||||    
T  36110134 gagaaatgatatttgtacaactatttttgtacaatttt 36110171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 526
Target Start/End: Original strand, 36488358 - 36488395
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36488358 gagaaatgatatttgaacaattatttttgtacaatttt 36488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 540
Target Start/End: Complemental strand, 18568507 - 18568455
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    |||||||||||||||||| |||||||||   |||||||||||||| |||||||    
T  18568507 agagaaatgatatttgtagaattattttgtgacaattttctctcttatactca 18568455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 54848150 - 54848202
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||  ||||||||||||  |||||||||||| |||||    
T  54848150 agaaatgatatttgtacaaccatttttgtacaaccttctctctcatattcaca 54848202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 7161586 - 7161532
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||| |||||||||||||||||| |||||| ||||| ||||||||||||| |||||    
T  7161586 tagaaaaatgatatttgtacaat-atttttttacaactttctctctcatattcaca 7161532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 41347528 - 41347474
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||| ||||||||||||| ||||||| |||| |||||||||||| ||||||    
T  41347528 tagagaaattatatttgtacaatcatttttg-acaactttctctctcatgctcaca 41347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 526
Target Start/End: Original strand, 43864032 - 43864071
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  43864032 tagagaaatgatatttgtacaactattttggtacaatttt 43864071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 526
Target Start/End: Complemental strand, 48791670 - 48791631
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  48791670 tagagaaatgatatttgtacaactatttttgtataatttt 48791631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 50980600 - 50980655
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||| |||||   ||||  ||||||||||||||||||    
T  50980600 tagagaaatgatatttgtacaatcattttctaacaaccttctctctcatactcaca 50980655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 526
Target Start/End: Complemental strand, 51107514 - 51107475
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  51107514 tagagaaatgatatttgtacaatcatttttgtataatttt 51107475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 33776907 - 33776960
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||| ||||| |||||    
T  33776907 agagaaatgatatttgtacaa-tatttttgtacaactttatctttcatattcaca 33776960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 37022271 - 37022325
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||  ||||| ||| |||||||||||||||    
T  37022271 agagaaatgatatttgtacaaccattttgatacaactttatctctcatactcaca 37022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 42490919 - 42490973
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  | ||||  |||| |||||||||||||||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcaca 42490973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 522
Target Start/End: Original strand, 50291281 - 50291315
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaa 522  Q
    |||||||||||||||||||||| ||||||||||||    
T  50291281 agagaaatgatatttgtacaatcatttttgtacaa 50291315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 1580342 - 1580290
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||   ||| || ||||||||||||||||||||||||    
T  1580342 gagaaatgatatttgtacaacactttgtg-acaattttctctctcatactcaca 1580290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Complemental strand, 4100791 - 4100762
Alignment:
Q  513 ttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||||    
T  4100791 ttttgtacaattttctctctcatactcaca 4100762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 516
Target Start/End: Complemental strand, 8481694 - 8481665
Alignment:
Q  487 tagagaaatgatatttgtacaattattttt 516  Q
    ||||||||||||||||||||||||||||||    
T  8481694 tagagaaatgatatttgtacaattattttt 8481665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 8848711 - 8848764
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  | |||| ||||||||||||||| | |||||||    
T  8848711 gagaaatgatatttgtacaacaaattttatacaattttctctcttacactcaca 8848764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 15515795 - 15515848
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||| |||||| ||||||   |||| |||||||||||||||||||    
T  15515795 gagaaatgatattggtacaactattttatgacaactttctctctcatactcaca 15515848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 522
Target Start/End: Complemental strand, 43511718 - 43511685
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaa 522  Q
    |||||||||||||||||||| |||||||||||||    
T  43511718 gagaaatgatatttgtacaactatttttgtacaa 43511685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 526
Target Start/End: Complemental strand, 45176806 - 45176769
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||||||||  |||||||||    
T  45176806 gagaaatgatatttgtacaattattttgttacaatttt 45176769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 49906143 - 49906195
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||| || ||||||||||||| ||||||||||    
T  49906143 gagaaatgatatttgtacaaccatttgtg-acaattttctctcacatactcaca 49906195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 50608683 - 50608631
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||| |||||||||||    
T  50608683 gagaaattatatttgaacaattatttttg-acaactttctctttcatactcaca 50608631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 526
Target Start/End: Complemental strand, 336877 - 336842
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||||||||| ||||||||    
T  336877 agaaatgatatttgtacaattatttttg-acaatttt 336842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 5386385 - 5386437
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||| ||||  ||||||  |||| |||||||||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcaca 5386437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 541
Target Start/End: Complemental strand, 7037520 - 7037492
Alignment:
Q  513 ttttgtacaattttctctctcatactcac 541  Q
    |||||||||||||||||||||||||||||    
T  7037520 ttttgtacaattttctctctcatactcac 7037492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 519
Target Start/End: Original strand, 8485575 - 8485607
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgta 519  Q
    |||||||||||||||||||||| ||||||||||    
T  8485575 tagagaaatgatatttgtacaactatttttgta 8485607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 516
Target Start/End: Original strand, 20760254 - 20760282
Alignment:
Q  488 agagaaatgatatttgtacaattattttt 516  Q
    |||||||||||||||||||||||||||||    
T  20760254 agagaaatgatatttgtacaattattttt 20760282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 516
Target Start/End: Original strand, 20766645 - 20766673
Alignment:
Q  488 agagaaatgatatttgtacaattattttt 516  Q
    |||||||||||||||||||||||||||||    
T  20766645 agagaaatgatatttgtacaattattttt 20766673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 27384186 - 27384234
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcata 536  Q
    |||||||||||||||||||||  |||||  ||||| |||||||||||||    
T  27384186 agagaaatgatatttgtacaaccattttattacaactttctctctcata 27384234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 542
Target Start/End: Original strand, 29891865 - 29891909
Alignment:
Q  498 tatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||| ||||||||||  |||| |||||||||||||||||||    
T  29891865 tatttgtataattattttttgacaactttctctctcatactcaca 29891909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 540
Target Start/End: Complemental strand, 35500860 - 35500808
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    ||||||||||||| || ||| ||||||||  |||| |||||||||||||||||    
T  35500860 agagaaatgatatatgaacatttattttttgacaactttctctctcatactca 35500808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 526
Target Start/End: Complemental strand, 38960730 - 38960694
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||  ||||||||||||||||    
T  38960730 agaaatgatatttgtacaaccatttttgtacaatttt 38960694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 6243045 - 6243098
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcaca 6243098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 41776186 - 41776239
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactcaca 41776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 7010683 - 7010738
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  7010683 tagagaaatgatatttgtacaatcattttttgacaattttctctctcatactcaca 7010738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 38939250 - 38939196
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  38939250 agagaaatgatatttctacaactatttttgtacaactttctctctcatactcaca 38939196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 37471654 - 37471707
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||    
T  37471654 gagaaatgatatttgtacaatcatttttgtacaactttctctctcgtactcaca 37471707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 539
Target Start/End: Complemental strand, 14233705 - 14233654
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactc 539  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  14233705 agagaaatgatatttgtacaactatttttttacaactttctctctcatactc 14233654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 13924021 - 13924075
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||| ||||||    
T  13924021 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcaca 13924075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 39884549 - 39884495
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||  |||||| || |||||||||||||||    
T  39884549 agagaaatgatatttgtacaattattttattacaatattatctctcatactcaca 39884495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 43590704 - 43590758
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||| ||| ||||||||| || |||||||||||||||||||    
T  43590704 agagaaatgatatttgtataatcatttttgtataactttctctctcatactcaca 43590758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 40413410 - 40413357
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 541  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  40413410 agagaaatgatatttgtacaattattttgtgacaactttctctctcatactcac 40413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 539
Target Start/End: Complemental strand, 8233554 - 8233506
Alignment:
Q  491 gaaatgatatttgtacaattatttttgtacaattttctctctcatactc 539  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  8233554 gaaatgatatttgtacaatcatttttgtacatctttctctctcatactc 8233506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 541
Target Start/End: Complemental strand, 35346023 - 35345971
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 541  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||| |||||    
T  35346023 gagaaatgatatttgtccaattatttttgtacaattttcttcctcatcctcac 35345971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 9963695 - 9963750
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctc-tcatactcaca 542  Q
    |||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||    
T  9963695 agagaaatgatatttgtacaataattttttgacaattttctctcatcatactcaca 9963750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 36675336 - 36675387
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||||||||    
T  36675336 gagaaatgatatttgtacaaccatttttgtacaactttttctctcatactca 36675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 25430656 - 25430710
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||||||||||  |||| |||||||||||||    
T  25430656 agagaaatgatatttgtacaaccatttttgtacaaccttctatctcatactcaca 25430710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 37392189 - 37392135
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||||  |||| |||||||||||||||||||    
T  37392189 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 37392135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 542
Target Start/End: Complemental strand, 42768179 - 42768129
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||| || ||||  ||||||||||||||||||||||||    
T  42768179 aaatgatatttgtacaactactttttgacaattttctctctcatactcaca 42768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 23265414 - 23265361
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||| || ||||||| ||||| ||| |||||||||||||||    
T  23265414 gagaaatgatatttgtataactatttttatacaactttttctctcatactcaca 23265361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 45405881 - 45405826
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  |||||  ||||| ||| |||||||||||||||    
T  45405881 tagagaaatgatatttgtacaaccattttgatacaactttttctctcatactcaca 45405826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 542
Target Start/End: Complemental strand, 14710950 - 14710900
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||| |||||   |||| |||||||||||||||||||    
T  14710950 aaatgatatttgtacaatcattttgtgacaactttctctctcatactcaca 14710900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 29107994 - 29108048
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| ||||||  |||| ||||||| | |||||||||    
T  29107994 agagaaatgatatttgtacaatcattttttaacaactttctcttttatactcaca 29108048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 38174294 - 38174240
Alignment:
Q  489 gagaaatgatatttgtacaattat-ttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||| ||| ||||  |||| |||||||||||||||||||    
T  38174294 gagaaatgatatttgtacaactatcttttagacaactttctctctcatactcaca 38174240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 7950040 - 7949999
Alignment:
Q  16 agaaagatgattgaaatacatacagaatgcggcaagcaagaa 57  Q
    ||||| ||| || |||||||||||||||||||||||||||||    
T  7950040 agaaatatggttaaaatacatacagaatgcggcaagcaagaa 7949999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 32777896 - 32777949
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||| |||||||  |||||| ||||| ||||||||| |||||||||    
T  32777896 gagaaatgatatctgtacaaccatttttatacaactttctctcttatactcaca 32777949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 45081398 - 45081451
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  | ||||  |||||||| |||||||||||||||    
T  45081398 gagaaatgatatttgtacaaccaatttttaacaattttgtctctcatactcaca 45081451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 540
Target Start/End: Original strand, 11138910 - 11138958
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    ||||||||||||||||| ||||||   |||| |||||||||||||||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactttctctctcatactca 11138958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 519
Target Start/End: Original strand, 18549977 - 18550009
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgta 519  Q
    ||||||||||||||||||||||| |||||||||    
T  18549977 tagagaaatgatatttgtacaatcatttttgta 18550009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 37294605 - 37294658
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||| ||  | ||||||||||  ||||||||||||||||||    
T  37294605 tagagaaatgatatttgtaaaa--acttttgtacaaccttctctctcatactcaca 37294658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 39211054 - 39211106
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||| ||||  ||||||  |||| |||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcaca 39211106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 33465099 - 33465046
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgtacaattttctctctcatactcaca 33465046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 49142579 - 49142524
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  49142579 tagagaaatgatatttgtacaaccatttttgtaaaattttctctctcatactcaca 49142524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 538
Target Start/End: Complemental strand, 37848680 - 37848631
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  37848680 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatact 37848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 5906026 - 5905972
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  5906026 agagaaatgatatttgtacaatcattttggtataactttctctctcatactcaca 5905972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 21589932 - 21589986
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||    
T  21589932 agagaaatgatatctgtacaattatttttgtacaactttttctttcatactcaca 21589986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 492 - 542
Target Start/End: Original strand, 29923685 - 29923735
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  29923685 aaatgacatttgtacaatcatttttgtacaactttctctctcatactcaca 29923735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 27866597 - 27866544
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||||||||||    
T  27866597 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcaca 27866544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 24380783 - 24380728
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  |||||| ||||| ||||| |||||||||||||    
T  24380783 tagagaaatgatatttgtacaaccatttttatacaactttctttctcatactcaca 24380728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 40108134 - 40108188
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||| |||||||||  |||||| ||||| |||||||||||||||||||    
T  40108134 agagaaatgatgtttgtacaaccatttttatacaactttctctctcatactcaca 40108188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 43942648 - 43942701
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||    
T  43942648 agagaaatgatatttgaacaactattttt-tacaactttctctctcatactcaca 43942701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 25272602 - 25272655
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||||||||| ||||||||  |||||||||    
T  25272602 gagaaatgatatttgtacaaccatttttgtacaactttctctcatatactcaca 25272655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 38547349 - 38547297
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||| |||||||  |||| ||||| |||||||||||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttctttctcatactcaca 38547297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 526
Target Start/End: Original strand, 1709282 - 1709321
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  1709282 tagagaaatgatatctgtacaatcatttttgtacaatttt 1709321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 27570353 - 27570408
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||| |||| |||||||  | || |||||||||||||||||||    
T  27570353 tagagaaatgatatttgaacaactattttttaataactttctctctcatactcaca 27570408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 45420122 - 45420067
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||| |||| |||||||  |||| ||||||||||||| |||||    
T  45420122 tagagaaatgatatttgaacaactattttttgacaactttctctctcatattcaca 45420067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 2323303 - 2323357
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  2323303 agagaaatgatatttgtacaacaattttatgacaactttctctctcatactcaca 2323357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 19510418 - 19510364
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||   |||| ||||||||| | |||||||    
T  19510418 agagaaatgatatttgtacaattattttctcacaactttctctcttaaactcaca 19510364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 522
Target Start/End: Original strand, 27704434 - 27704468
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaa 522  Q
    ||||||||||||||||||||| |||||||||||||    
T  27704434 agagaaatgatatttgtacaactatttttgtacaa 27704468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Original strand, 41538481 - 41538519
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  41538481 agagaaatgatatttgtacaaccatttttgtacaatttt 41538519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 41985161 - 41985107
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| | |||   |||| |||||||||||||||||||    
T  41985161 agagaaatgatatttgtacaatcaatttgtgacaactttctctctcatactcaca 41985107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Original strand, 42552898 - 42552936
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  42552898 agagaaatgatatttgtacaatcatttttatacaatttt 42552936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 43213318 - 43213372
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  | |||   ||||||||||||||||||||||||    
T  43213318 agagaaatgatatttgtacaaccactttctaacaattttctctctcatactcaca 43213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 8742394 - 8742447
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||| ||| |||  |||| ||| |||||||||||||||    
T  8742394 gagaaatgatatttgtacaactatgttttgacaactttttctctcatactcaca 8742447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 526
Target Start/End: Original strand, 11325898 - 11325934
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  11325898 gagaaatgatatttgtacaattatttttg-acaatttt 11325934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 541
Target Start/End: Original strand, 26749016 - 26749068
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 541  Q
    |||||||||||||||| ||||  ||||||| |||| ||||||||||||||||||    
T  26749016 agagaaatgatatttgaacaacaatttttg-acaactttctctctcatactcac 26749068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 522
Target Start/End: Complemental strand, 40207871 - 40207838
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaa 522  Q
    |||||||||||||||||||| |||||||||||||    
T  40207871 gagaaatgatatttgtacaactatttttgtacaa 40207838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 517
Target Start/End: Complemental strand, 40231777 - 40231748
Alignment:
Q  488 agagaaatgatatttgtacaattatttttg 517  Q
    ||||||||||||||||||||||||||||||    
T  40231777 agagaaatgatatttgtacaattatttttg 40231748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 516
Target Start/End: Complemental strand, 2849593 - 2849565
Alignment:
Q  488 agagaaatgatatttgtacaattattttt 516  Q
    |||||||||||||||||||||||||||||    
T  2849593 agagaaatgatatttgtacaattattttt 2849565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 526
Target Start/End: Original strand, 17039158 - 17039194
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  17039158 agaaatgatatttgtacaactatttttgtataatttt 17039194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 20460064 - 20459984
Alignment:
Q  18 aaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgat 98  Q
    ||||||| || ||||||||||| |||| | ||||||||||| |||| |||||||| || ||  ||| |||||||| |||||    
T  20460064 aaagatggttaaaatacatacaaaatgtgacaagcaagaagacagccaaaggagctagttttgcattagccattgtttgat 20459984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 526
Target Start/End: Complemental strand, 23034383 - 23034347
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||  ||||||||||||||||    
T  23034383 agaaatgatatttgtacaaccatttttgtacaatttt 23034347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 24044806 - 24044754
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||   |||| | ||||| |||||||||||    
T  24044806 agaaatgatatttgtacaattattttgtgacaactctctctttcatactcaca 24044754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 27473103 - 27473150
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcata 536  Q
    ||||||||||||||| |||||||||||||| |||| ||| |||||||||    
T  27473103 agagaaatgatatttatacaattatttttg-acaactttttctctcata 27473150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 526
Target Start/End: Complemental strand, 35213025 - 35212989
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||||||||  |||||||||    
T  35213025 agaaatgatatttgtacaattattttgctacaatttt 35212989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 8442170 - 8442223
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  8442170 gagaaatgatatttgtacaattatttttgtacaactttctctctcatattcaca 8442223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 9957262 - 9957208
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  9957262 agagaaatgatatttgtacaattatttttgtagaactttctttctcatactcaca 9957208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 11878439 - 11878493
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||    
T  11878439 agagaaatgatatttgtacaattatttttatataattttctatctcatactcaca 11878493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 32732179 - 32732125
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  32732179 agagaaattatatttgtacaatcatttttgtacaactttctctctcatactcaca 32732125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 494 - 542
Target Start/End: Original strand, 7080546 - 7080594
Alignment:
Q  494 atgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||    
T  7080546 atgatatttgtacaatcatttttgtacaactttctctctcatactcaca 7080594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 43153122 - 43153067
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||    
T  43153122 tagagaaatgatatttgtacaacaatttttgtacaactttctctctcatattcaca 43153067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 12203157 - 12203211
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||| ||||||    
T  12203157 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcaca 12203211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 537
Target Start/End: Original strand, 24486895 - 24486944
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatac 537  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  24486895 agagaaatgatatttgaacaataatttttgtacaattttctttctcatac 24486944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 531
Target Start/End: Original strand, 38919862 - 38919905
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctc 531  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  38919862 agagaaatgatatttgtacaactatttttgtacaactttctctc 38919905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 40201182 - 40201127
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| |||||  ||||||||||||| |||||||||||| |||||    
T  40201182 tagagaaatgatatttatacaaccatttttgtacaatattctctctcatagtcaca 40201127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 538
Target Start/End: Original strand, 3849509 - 3849559
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||| |||||||||||||||||| || ||| |||||||    
T  3849509 agagaaatgatatttgttcaattatttttgtacaatcttttctttcatact 3849559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 4434481 - 4434535
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||||  |||||||| |||||||||||||||    
T  4434481 agagaaatgatatttgtacaaccattttttgacaattttttctctcatactcaca 4434535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 14206399 - 14206453
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||||  |||| |||||||||||||||||||    
T  14206399 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 14206453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 532
Target Start/End: Original strand, 38387610 - 38387653
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctct 532  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  38387610 gagaaatgatatttgtacaaccatttttgtacaactttctctct 38387653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 14923082 - 14923135
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||    
T  14923082 agagaaatgatatttgaacaaccattttt-tacaactttctctctcatactcaca 14923135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 522
Target Start/End: Complemental strand, 24330054 - 24330020
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaa 522  Q
    |||||||||||||||||||||||||||| ||||||    
T  24330054 agagaaatgatatttgtacaattattttggtacaa 24330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Complemental strand, 34693288 - 34693250
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  34693288 agagaaatgatatttgtacaatcatttttgtataatttt 34693250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Complemental strand, 35474563 - 35474525
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  35474563 agaggaatgatatttgtacaattaattttgtacaatttt 35474525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 516
Target Start/End: Complemental strand, 11881060 - 11881031
Alignment:
Q  487 tagagaaatgatatttgtacaattattttt 516  Q
    ||||||||||||||||||||||||||||||    
T  11881060 tagagaaatgatatttgtacaattattttt 11881031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 516
Target Start/End: Complemental strand, 27005552 - 27005523
Alignment:
Q  487 tagagaaatgatatttgtacaattattttt 516  Q
    ||||||||||||||||||||||||||||||    
T  27005552 tagagaaatgatatttgtacaattattttt 27005523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 542
Target Start/End: Original strand, 38010907 - 38010936
Alignment:
Q  513 ttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||||    
T  38010907 ttttgtacaattttctctctcatactcaca 38010936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 526
Target Start/End: Complemental strand, 30103521 - 30103485
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  30103521 agaaatgatatttgtacaatcatttttgtataatttt 30103485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 33910147 - 33910095
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||| |||  ||||||  |||| |||||||||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctcatactcaca 33910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 22296191 - 22296136
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  22296191 tagagaaatgatatttgtacaaccatttttgtacaattttctctctgatactcaca 22296136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 6885541 - 6885487
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  6885541 agagaaatgatttttgtacaactatttttatacaattttctctctcatactcaca 6885487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 538
Target Start/End: Original strand, 40115525 - 40115575
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  40115525 agagaaatgatatttgtacaactatttttgtataattttctctctcatact 40115575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 42607591 - 42607537
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  42607591 agagaaatgatatttgtacaattattttgtgacaattttctctctcatactcaca 42607537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 43076312 - 43076361
Alignment:
Q  491 gaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  43076312 gaaatgatatttgtataatcatttttgtacaattttctctctcatactca 43076361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 24727426 - 24727479
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  ||||| |||||| |||||||||||||||||||    
T  24727426 gagaaatgatatttgtacaaccattttggtacaactttctctctcatactcaca 24727479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 537
Target Start/End: Complemental strand, 27329170 - 27329121
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatac 537  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  27329170 agagaaatgatatttgtacaatcattttggtacaactttctctctcatac 27329121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 38777903 - 38777955
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||| |||||    
T  38777903 agaaaggatatttgtacaatcatttttatacaattttctctctcatattcaca 38777955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 13453780 - 13453833
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  13453780 agagaaatgatatttgtacaattttttttg-acaactttttctctcatactcaca 13453833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 13881105 - 13881159
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||| |||||||||| |||||||||||| ||| ||| |||||||||||    
T  13881105 agagaaatgatgtttgtacaatcatttttgtacaactttatctttcatactcaca 13881159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 14021230 - 14021284
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||| |||||||||| |||||||||||| ||| ||| |||||||||||    
T  14021230 agagaaatgatgtttgtacaatcatttttgtacaactttatctttcatactcaca 14021284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 38724379 - 38724325
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||| ||| |||||||||||||| |||||||    
T  38724379 agagaaatgatatttgtacaaccattttagtataattttctctctcacactcaca 38724325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 9647142 - 9647194
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    ||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  9647142 tagagaaatgatatttgaacaactattttt-tacaactttctctctcatactca 9647194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 10550521 - 10550468
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    |||||||||||||| ||||||| |||||||  |||| |||||||||||||||||    
T  10550521 tagagaaatgatatatgtacaactattttttcacaactttctctctcatactca 10550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 492 - 541
Target Start/End: Complemental strand, 11828877 - 11828828
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctcatactcac 541  Q
    |||||||||||||||||  |||||||||||| ||||||||||||| ||||    
T  11828877 aaatgatatttgtacaaccatttttgtacaactttctctctcatattcac 11828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 27538976 - 27538923
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||||||||| ||||||| | |||||||||    
T  27538976 gagaaatgatatttgtacaaccatttttgtacaactttctctatgatactcaca 27538923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 497 - 542
Target Start/End: Original strand, 34215284 - 34215329
Alignment:
Q  497 atatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||    
T  34215284 atatttgtacaattattttttgacaattttctctctcatattcaca 34215329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 45202192 - 45202139
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||| ||||| ||||||||||||| |||||    
T  45202192 gagaaatgatatttgtacaaccatttttttacaactttctctctcatattcaca 45202139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 33583280 - 33583229
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| ||| ||||||| |||||||||||| |||||||||||    
T  33583280 agaaatgatatttgtataatcatttttg-acaattttctctttcatactcaca 33583229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 536
Target Start/End: Original strand, 10216864 - 10216911
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcata 536  Q
    ||||||||||||||||||||| | ||||  ||||||||||||||||||    
T  10216864 gagaaatgatatttgtacaatcactttttgacaattttctctctcata 10216911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 15141471 - 15141526
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||||   |||| |||||||||||||||||||    
T  15141471 tagagaaatgatatttgtacatctattttatgacaactttctctctcatactcaca 15141526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 22353237 - 22353182
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||| |||||   |||| ||||| |||||||||||||    
T  22353237 tagagaaatgatatttgtacaatcattttgtgacaactttctttctcatactcaca 22353182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 23141367 - 23141417
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||   ||||||||| | |||||||||||||||||    
T  23141367 gagaaatgatatttgtacaatt---tttgtacaactgtctctctcatactcaca 23141417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 23553157 - 23553207
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||   ||||||||| | |||||||||||||||||    
T  23553157 gagaaatgatatttgtacaatt---tttgtacaactgtctctctcatactcaca 23553207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 24491738 - 24491684
Alignment:
Q  490 agaaatgatatttgtacaatta--tttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||  |  |||||||||||||||||||||| ||||||||    
T  24491738 agaaatgatatttgtacaaccaattttttgtacaattttctctctcgtactcaca 24491684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 534
Target Start/End: Original strand, 694279 - 694325
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctca 534  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||||    
T  694279 agagaaatgatatttgtacaaccattttttgacaattttctctctca 694325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 4138246 - 4138192
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||| || ||||||   |||| |||||||||||||||||||    
T  4138246 agagaaatgatatttgtataactattttctaacaactttctctctcatactcaca 4138192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 10711735 - 10711789
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| |||  ||||||   ||||||||||||||||||||||||    
T  10711735 agagaaatgatatttgaacatctattttgtgacaattttctctctcatactcaca 10711789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 542
Target Start/End: Original strand, 30996742 - 30996792
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||| ||| ||||  |||| |||||||||||||||||||    
T  30996742 aaatgatatttgtacatttactttttgacaactttctctctcatactcaca 30996792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 522
Target Start/End: Original strand, 34141441 - 34141475
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaa 522  Q
    |||||||||||||||||||||| ||||||||||||    
T  34141441 agagaaatgatatttgtacaatcatttttgtacaa 34141475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 542
Target Start/End: Complemental strand, 38598406 - 38598356
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||| ||  ||||||||||||  ||||||||||||||||||    
T  38598406 aaatgatatttgtataaccatttttgtacaaccttctctctcatactcaca 38598356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 40700206 - 40700260
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||| ||||||||||| ||||||   |||| |||||||||||||||||||    
T  40700206 agagaaatggtatttgtacaactattttataacaactttctctctcatactcaca 40700260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 285531 - 285478
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    ||||||||||||||||||||| | ||||| | |||| |||||||| ||||||||    
T  285531 tagagaaatgatatttgtacattcattttggaacaactttctctcgcatactca 285478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 526
Target Start/End: Complemental strand, 7664140 - 7664103
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  7664140 gagaaatgatatttgaacaattatttttggacaatttt 7664103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 8757555 - 8757608
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||| |||||||||||  |||||| ||||| ||| |||||||||||||||    
T  8757555 gagaaatgttatttgtacaaccatttttatacaactttatctctcatactcaca 8757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 526
Target Start/End: Original strand, 17917389 - 17917426
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  17917389 gagaaatgatatttgtacaattattttttaacaatttt 17917426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 35008160 - 35008108
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| |   ||||||||||||| | |||||||||||||    
T  35008160 tagagaaatgatatttgtacaact---tttgtacaattttatttctcatactcaca 35008108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 35792699 - 35792646
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||  ||||||||| | |||||||||||||    
T  35792699 gagaaatgatatttgtacaaccattttgttacaattttttttctcatactcaca 35792646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 305044 - 304996
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcata 536  Q
    |||||||| ||||||||||||  ||||| |||||| |||||||||||||    
T  305044 agagaaattatatttgtacaaccattttggtacaactttctctctcata 304996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 1096401 - 1096350
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| |   |||||| |||||| |||||||||||||||    
T  1096401 agagaaatgatatttgtacaact---tttgtataattttatctctcatactcaca 1096350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 540
Target Start/End: Original strand, 9432013 - 9432065
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    |||||||||| ||||||||||  |||||  ||||||||||||| |||||||||    
T  9432013 agagaaatgaaatttgtacaaccattttgatacaattttctctttcatactca 9432065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 519
Target Start/End: Original strand, 12256899 - 12256931
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgta 519  Q
    ||||||||||||||||||||||| |||||||||    
T  12256899 tagagaaatgatatttgtacaatcatttttgta 12256931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 32975070 - 32975122
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||  |||||||||||   |||||||| |||||||||||||||    
T  32975070 agaaatgatattttgacaattattttgtgacaattttatctctcatactcaca 32975122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 526
Target Start/End: Original strand, 37076658 - 37076694
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||||||||| || ||||||    
T  37076658 agaaatgatatttgtacaattatttttatataatttt 37076694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 43205106 - 43205157
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| |   |||||||||  ||||||||||||||||||    
T  43205106 agagaaatgatatttgtacaact---tttgtacaacattctctctcatactcaca 43205157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 9395397 - 9395344
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  9395397 gagaaatgatatttgtacaactatttttgtacaactttctctttcatactcaca 9395344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 32135491 - 32135438
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||    
T  32135491 gagaaatgatatttgtacaatcatttttgtacaactttctctatcatactcaca 32135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 32644623 - 32644676
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctcatactcaca 32644676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 35162628 - 35162559
Alignment:
Q  29 aaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgat 98  Q
    ||||||||||||||||| || || |||||| || | |||||||||||||||||| ||||||||| |||||    
T  35162628 aaatacatacagaatgcagcgagtaagaagacaacgaaaggagcaagcttaacagaagccattgtttgat 35162559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 539
Target Start/End: Complemental strand, 2165361 - 2165310
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactc 539  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||||||||    
T  2165361 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2165310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 539
Target Start/End: Complemental strand, 2176994 - 2176943
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactc 539  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||||||||    
T  2176994 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 17442832 - 17442886
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||| |||||||||    
T  17442832 agagaaataatatttgtacaaccatttttgtacaactttctctcttatactcaca 17442886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 25562001 - 25561947
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||| ||||||| |||||| ||||| ||| |||||||||||||||    
T  25562001 agagaaatgatattcgtacaatcatttttatacaactttatctctcatactcaca 25561947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 25567551 - 25567497
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||| ||||||  |||||||||||| ||| |||||||||||||||    
T  25567551 agagaaatgatattcgtacaaccatttttgtacaactttatctctcatactcaca 25567497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 26101515 - 26101461
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||| ||||||| |||||| ||||| ||| |||||||||||||||    
T  26101515 agagaaatgatattcgtacaatcatttttatacaactttatctctcatactcaca 26101461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 6803507 - 6803572
Alignment:
Q  26 ttgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccatt 91  Q
    |||||||||||||| |||| ||||| ||||||| || | |||||||||||| ||||||||| ||||    
T  6803507 ttgaaatacatacataatgtggcaaacaagaagacaaccaaaggagcaagcctaacataagtcatt 6803572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 538
Target Start/End: Original strand, 16121163 - 16121212
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  16121163 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatact 16121212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 542
Target Start/End: Original strand, 4922979 - 4923010
Alignment:
Q  511 atttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||||||    
T  4922979 atttttgtacaattttctctctcatactcaca 4923010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 522
Target Start/End: Original strand, 34792020 - 34792055
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaa 522  Q
    ||||||||||||||||||||||| ||||||||||||    
T  34792020 tagagaaatgatatttgtacaatcatttttgtacaa 34792055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 1196057 - 1196111
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| | ||||  |||| ||||||||| |||||||||    
T  1196057 agagaaatgatatttgtacaatcactttttgacaactttctctctaatactcaca 1196111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 12441537 - 12441591
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| || |||   |||| |||||||||||||||||||    
T  12441537 agagaaatgatatttgtacaactactttgtgacaactttctctctcatactcaca 12441591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 538
Target Start/End: Original strand, 31413539 - 31413585
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||    
T  31413539 aaatgatatttgtacaattattttgtgacaattttctctctaatact 31413585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 538
Target Start/End: Original strand, 2163702 - 2163751
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||| | |||   ||||||||||||||||||||    
T  2163702 gagaaatgatatttgtacaatcaatttgtgacaattttctctctcatact 2163751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 538
Target Start/End: Original strand, 2175335 - 2175384
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||| | |||   ||||||||||||||||||||    
T  2175335 gagaaatgatatttgtacaatcaatttgtgacaattttctctctcatact 2175384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 526
Target Start/End: Original strand, 6256435 - 6256472
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  6256435 gagaaatgatatttgtacaattattttttgacaatttt 6256472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 12837942 - 12838003
Alignment:
Q  33 acatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgat 94  Q
    |||||||||||| ||||||||||||  |||| |||| |||||| || | |||||||||||||    
T  12837942 acatacagaatgtggcaagcaagaaaacagccaaagaagcaagtttgaaataagccattgat 12838003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 541
Target Start/End: Original strand, 24437454 - 24437507
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 541  Q
    |||||||| |||||||| ||||||||||   | |||||||||||||||||||||    
T  24437454 agagaaattatatttgtgcaattattttgtgataattttctctctcatactcac 24437507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 16865565 - 16865617
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||| | |||||||||| ||||| ||| || ||||||    
T  16865565 agaaatgatatttgtacaatcacttttgtacaactttctatcttatgctcaca 16865617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 515
Target Start/End: Complemental strand, 26396548 - 26396520
Alignment:
Q  487 tagagaaatgatatttgtacaattatttt 515  Q
    |||||||||||||||||||||||||||||    
T  26396548 tagagaaatgatatttgtacaattatttt 26396520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 30636195 - 30636275
Alignment:
Q  18 aaagatgattgaaatacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgat 98  Q
    ||||||| || ||||||||||| ||||  |||| ||||||  || | |||||||| |||||| |||||||||||| |||||    
T  30636195 aaagatggttaaaatacatacaaaatgttgcaaacaagaatacaaccaaaggagctagcttagcataagccattgtttgat 30636275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 11121491 - 11121545
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  | |||||||||| |||||||||||||||||||    
T  11121491 agagaaatgatatttgtacaacaacttttgtacaactttctctctcatactcaca 11121545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 21446279 - 21446225
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||| |||||| ||||| |||||| |||||||||||||||||||    
T  21446279 agagaaatgatatttatacaatcattttagtacaactttctctctcatactcaca 21446225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 30414874 - 30414928
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  30414874 agagaaatgatatttgtacaaccatttttgtacaaccttctctctcatactcaca 30414928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 16252819 - 16252766
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||||||||| ||||||| |||||||||||    
T  16252819 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatactcaca 16252766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 50460771 - 50460719
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  50460771 agaaatgatatttgtacaaccatttttgtacaactttctttctcatactcaca 50460719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 495 - 542
Target Start/End: Original strand, 1603011 - 1603058
Alignment:
Q  495 tgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||    
T  1603011 tgatatttgtacaattattttttaacaactttctctctcatactcaca 1603058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 487 - 526
Target Start/End: Original strand, 22674710 - 22674749
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  22674710 tagagaaatgatatttgtacaactatttttgtacaatttt 22674749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 46903480 - 46903534
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||  ||||| |||||||||||||||||||    
T  46903480 agagaaatgatatttgtacaaccattttgatacaactttctctctcatactcaca 46903534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 50797790 - 50797844
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||| |||||   |||| |||||||||||||||||||    
T  50797790 agagaaatgatatttgtacaatcattttgtgacaactttctctctcatactcaca 50797844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 538
Target Start/End: Complemental strand, 35030822 - 35030773
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    |||||||| |||||||||||  |||||||||||| |||||||||||||||    
T  35030822 gagaaatgttatttgtacaaccatttttgtacaactttctctctcatact 35030773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 37690429 - 37690482
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| | |||   ||||||||||||||||||||||||    
T  37690429 gagaaatgatatttgtacaatcactttatgacaattttctctctcatactcaca 37690482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 526
Target Start/End: Original strand, 43105105 - 43105142
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  43105105 gagaaatgatatttgtacaattatttttgtataatttt 43105142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 47398511 - 47398458
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||| ||| | ||||||  ||||||||||||||||||||||||    
T  47398511 gagaaatgatatttgaacattcattttttgacaattttctctctcatactcaca 47398458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 526
Target Start/End: Original strand, 36794613 - 36794652
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  36794613 tagagaaatgatatttgtacaattattttggtataatttt 36794652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 542
Target Start/End: Complemental strand, 40118753 - 40118722
Alignment:
Q  511 atttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||||||||||||    
T  40118753 atttttgtacaattttctctctcatactcaca 40118722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 43757597 - 43757652
Alignment:
Q  487 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||||  |||||  ||||| ||||||| |||||||||||    
T  43757597 tagagaaatgatatttgtacaaccattttgatacaactttctctttcatactcaca 43757652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 48689570 - 48689620
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||| |   |||||| ||||||||||||||||||||||    
T  48689570 gagaaatgatatttgtacaact---tttgtataattttctctctcatactcaca 48689620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 526
Target Start/End: Original strand, 1100216 - 1100254
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  1100216 agagaaatgatatttgtacaaccatttttgtacaatttt 1100254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 19427520 - 19427574
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||| |||||  ||||| |||||| |||||||| ||||||||||    
T  19427520 agagaaatgatatttatacaaccattttggtacaactttctctcacatactcaca 19427574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 522
Target Start/End: Complemental strand, 21854536 - 21854502
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaa 522  Q
    |||||||||||||||||||||||||||| ||||||    
T  21854536 agagaaatgatatttgtacaattattttggtacaa 21854502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 40596115 - 40596061
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  40596115 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 40596061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 45272221 - 45272167
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  | ||||  |||| |||||||||||||||||||    
T  45272221 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcaca 45272167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 48325839 - 48325785
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  |||||   |||||||||| |||||||||||||    
T  48325839 agagaaatgatatttgtacaaccattttgtgacaattttctatctcatactcaca 48325785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 16836175 - 16836122
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||| |||||   |||| ||| |||||||||||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaactttttctctcatactcaca 16836122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 518
Target Start/End: Complemental strand, 25239306 - 25239277
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgt 518  Q
    ||||||||||||||||||||||||||||||    
T  25239306 gagaaatgatatttgtacaattatttttgt 25239277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 526
Target Start/End: Complemental strand, 31244804 - 31244767
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  31244804 gagaaatgatatttgtataatcatttttgtacaatttt 31244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 526
Target Start/End: Complemental strand, 40118786 - 40118749
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaatttt 526  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  40118786 gagaaatgatatttgtacaatcatttttgtataatttt 40118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 40139126 - 40139179
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctcatactcaca 40139179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 41507254 - 41507201
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    ||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 41507201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 533
Target Start/End: Complemental strand, 42412214 - 42412173
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaattttctctctc 533  Q
    |||||||||||||||||||||||| | ||||| |||||||||    
T  42412214 aaatgatatttgtacaattattttaggacaatcttctctctc 42412173  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 540
Target Start/End: Original strand, 4154591 - 4154643
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    ||||||||||||| |||||| ||| ||||  |||| |||||||||||||||||    
T  4154591 agagaaatgatatatgtacatttactttttgacaactttctctctcatactca 4154643  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 522
Target Start/End: Complemental strand, 5574329 - 5574297
Alignment:
Q  490 agaaatgatatttgtacaattatttttgtacaa 522  Q
    |||||||||||||||||||| ||||||||||||    
T  5574329 agaaatgatatttgtacaatcatttttgtacaa 5574297  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 516
Target Start/End: Original strand, 16987446 - 16987474
Alignment:
Q  488 agagaaatgatatttgtacaattattttt 516  Q
    |||||||||||||||||||||||||||||    
T  16987446 agagaaatgatatttgtacaattattttt 16987474  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 515
Target Start/End: Original strand, 26101392 - 26101420
Alignment:
Q  487 tagagaaatgatatttgtacaattatttt 515  Q
    |||||||||||||||||||||||||||||    
T  26101392 tagagaaatgatatttgtacaattatttt 26101420  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 516
Target Start/End: Complemental strand, 35883679 - 35883651
Alignment:
Q  488 agagaaatgatatttgtacaattattttt 516  Q
    |||||||||||||||||||||||||||||    
T  35883679 agagaaatgatatttgtacaattattttt 35883651  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 48028536 - 48028584
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcata 536  Q
    ||||||||| |||||||||||| ||||||||| || ||||||| |||||    
T  48028536 agagaaatgttatttgtacaatcatttttgtataactttctctttcata 48028584  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 540
Target Start/End: Complemental strand, 48103449 - 48103398
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 540  Q
    |||||||||||||||| |||| ||||| || |||| |||||||||||||||||    
T  48103449 agagaaatgatatttgaacaactatttgtg-acaactttctctctcatactca 48103398  T

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Target: scaffold0286 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 539
Target Start/End: Original strand, 17048 - 17099
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactc 539  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||||||||    
T  17048 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 17099  T

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Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 538
Target Start/End: Complemental strand, 18707 - 18658
Alignment:
Q  489 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 538  Q
    ||||||||||||||||||||| | |||   ||||||||||||||||||||    
T  18707 gagaaatgatatttgtacaatcaatttgtgacaattttctctctcatact 18658  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 31661 - 31607
Alignment:
Q  488 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 542  Q
    |||||||||||||||||||||  ||||||  |||| |||||||||||||||||||    
T  31661 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 31607  T

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Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 491 - 532
Target Start/End: Original strand, 9296 - 9337
Alignment:
Q  491 gaaatgatatttgtacaattatttttgtacaattttctctct 532  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  9296 gaaatgatatttgtacaactattttagtacaattttctctct 9337  T

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Target: scaffold0112 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 26178 - 26262
Alignment:
Q  31 atacatacagaatgcggcaagcaagaaggcagcaaaaggagcaagcttaacataagccattgattgatggatcaaaagaaagaat 115  Q
    |||||||||||||| ||  |||| |||| ||||  ||| | ||||||||||||||| ||||| ||| | ||||||||||||||||    
T  26178 atacatacagaatgtggtgagcatgaagacagccgaagtaacaagcttaacataagtcattgtttgtttgatcaaaagaaagaat 26262  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 526
Target Start/End: Original strand, 48657 - 48691
Alignment:
Q  492 aaatgatatttgtacaattatttttgtacaatttt 526  Q
    |||||||||||||||||| ||||||||||||||||    
T  48657 aaatgatatttgtacaatcatttttgtacaatttt 48691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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