View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19916_high_24 (Length: 312)
Name: NF19916_high_24
Description: NF19916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19916_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 233970 - 233662
Alignment:
| Q |
1 |
attaaataaaaggaaatgggtcctatataattttactaattaaaaggtgccggaagaatgaaacagcccaaagtgttactagagaaatatacacggttca |
100 |
Q |
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| T |
233970 |
attaaataaaaggaaatgggtcctatataattttactaattaaaaggtgccggaagaatgaaacagcccaaagtgttactagagaaatatacacggttca |
233871 |
T |
|
| Q |
101 |
tttagtgctttctattttactcttttccaccgtctaatgagagaccaaagttagttcattagcatcatttcatgcatgattcatgaccaccatttagaca |
200 |
Q |
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| T |
233870 |
tttagtgctttctattttactcttttccaccgtctaatgagagaccaaagttagttcattagcatcatttcatgcatgattcatgaccaccatttagaca |
233771 |
T |
|
| Q |
201 |
caaaagctgattaactcagattcactaatcatgcnnnnnnnncgcagcttagaattaaggaatcatttataaattaatgtaattggactgagtcacacag |
300 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
233770 |
caaaagctgattaactcagattcactaatcatgcttttttttcgcagcttagaattaaggaatcatttataaattaatgtaattggactgagtcacacag |
233671 |
T |
|
| Q |
301 |
cctttggtt |
309 |
Q |
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|||| |||| |
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| T |
233670 |
ccttcggtt |
233662 |
T |
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