View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19916_high_32 (Length: 261)
Name: NF19916_high_32
Description: NF19916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19916_high_32 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 46486915 - 46486685
Alignment:
| Q |
20 |
tgcattgcatgggtgatttagagaaattagtggaggatggaatagaatttacgttggtcggcctcaattaaaaagatgaacttgtaaagaaaaaagccac |
119 |
Q |
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| T |
46486915 |
tgcattgcatgggtgatatagagaaattagtggaggatggaatagaatttacgttggtcggcctcaattaaaaagatgaacttgtaaagaaaaaagccac |
46486816 |
T |
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| Q |
120 |
actaattcaagtgtgttgctcaagactcgaattttgaacattatacgttcaaataattcttgacttaccattattgtatagtttttgtcaccatgaaata |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46486815 |
actaattcaagtgtgttgctcaagactcgaattttgaacattatacgttcaaataattcttgacttaccattattgtatagtttttgtcaccatgaaata |
46486716 |
T |
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| Q |
220 |
aactacctacatcaaacatcattgtccctat |
250 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
46486715 |
aactacctacatcaaacatcattgtccctat |
46486685 |
T |
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