View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19916_high_38 (Length: 253)
Name: NF19916_high_38
Description: NF19916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19916_high_38 |
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Alignment Details
Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 60 - 237
Target Start/End: Original strand, 20679548 - 20679725
Alignment:
| Q |
60 |
ttgttaaccgtcctttccaccataagggttgtcatctcttgtcggccatcactttatgttgctacatatacatgtttgattttgatcttcattgatgtca |
159 |
Q |
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| T |
20679548 |
ttgttaaccatcctttccacgataaggattatcatccgttgtcggacatcactttacgttgctacatatacatgtttgattttgatcttcattgatgcca |
20679647 |
T |
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| Q |
160 |
caacgtcacaatcagtttgattctcgtcggccatcgttatgcgaggtcttcaaaagggttttaagttttggagtacga |
237 |
Q |
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| T |
20679648 |
caacgtcacgataagtttgattctcgtcggccatcgttatgcgagatctccgaaagggttttaagttttagagtacga |
20679725 |
T |
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