View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19916_low_17 (Length: 388)
Name: NF19916_low_17
Description: NF19916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19916_low_17 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 19 - 378
Target Start/End: Complemental strand, 22831031 - 22830672
Alignment:
| Q |
19 |
gatactggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttag |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22831031 |
gatactggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttaccttag |
22830932 |
T |
|
| Q |
119 |
ctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggatt |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22830931 |
ctccagttagtgttggttttagtcataaaccaacacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggatt |
22830832 |
T |
|
| Q |
219 |
ctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcct |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22830831 |
ctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaatctcaaaaccttgaaatctctgaccttcct |
22830732 |
T |
|
| Q |
319 |
gtagtaagagtatttgctgagnnnnnnnngtccaaatttttaactgttaggttgcctttg |
378 |
Q |
| |
|
| || |||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
22830731 |
ggagaaagagtatttgctgagaaaaaaaagtccaaatttttaactgttcggttgcctttg |
22830672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 27 - 378
Target Start/End: Complemental strand, 22840044 - 22839693
Alignment:
| Q |
27 |
tcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagtt |
126 |
Q |
| |
|
|||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||| || |
|
|
| T |
22840044 |
tcgattcagggatttatccctctccagtggatatcctatgcaagtatggattgaatatgatagagtgaagaaaaagattgatgttaccttagctccattt |
22839945 |
T |
|
| Q |
127 |
agtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatctt |
226 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22839944 |
agtgttggttttagtcataaaccaacacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatctt |
22839845 |
T |
|
| Q |
227 |
caacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctgtagtaag |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |
|
|
| T |
22839844 |
caacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaatctcaaaaccttgaaatctctgaccttcctggagaaag |
22839745 |
T |
|
| Q |
327 |
agtatttgctgagnnnnnnnngtccaaatttttaactgttaggttgcctttg |
378 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
22839744 |
agtatttgctgagaaaaaaaagtccaaatttttaactgttcggttgcctttg |
22839693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 24 - 378
Target Start/End: Complemental strand, 22815022 - 22814668
Alignment:
| Q |
24 |
tggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctcca |
123 |
Q |
| |
|
||||| ||||||| | ||||||||| ||| |||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
22815022 |
tggtcaattcagggagttatccctttccaatggatttcctatacaggtatggattgactatgatggagtgaagaaaaagattgatgttactttagctcca |
22814923 |
T |
|
| Q |
124 |
gttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcat |
223 |
Q |
| |
|
| ||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22814922 |
atgagtgttggtgctagtaataaaccaacacaacctttgttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcat |
22814823 |
T |
|
| Q |
224 |
cttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctgtagt |
323 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| ||||| |||||| | |
|
|
| T |
22814822 |
cttcaacagggttacttgtagcttctcattatattcttgggtggagttttaaggttaatggccaagctcaaaaccttgaaatatctgaacttcctaagct |
22814723 |
T |
|
| Q |
324 |
aagagtatttgctgagnnnnnnnngtccaaatttttaactgttaggttgcctttg |
378 |
Q |
| |
|
|| ||||||||||||| ||| ||||||||||||||| ||||||||||| |
|
|
| T |
22814722 |
aacagtatttgctgaggtaaaaaagtctaaatttttaactgttgggttgcctttg |
22814668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 24 - 318
Target Start/End: Complemental strand, 22889287 - 22888993
Alignment:
| Q |
24 |
tggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctcca |
123 |
Q |
| |
|
||||| ||||| | ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| |
|
|
| T |
22889287 |
tggtcaattcaaggatttatccctttccagtggataccctatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttactttagcacca |
22889188 |
T |
|
| Q |
124 |
gttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcat |
223 |
Q |
| |
|
| ||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22889187 |
atgagtgttggtgctagtaataaaccaacacaacctttgttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcat |
22889088 |
T |
|
| Q |
224 |
cttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcct |
318 |
Q |
| |
|
||||||||||||| || | ||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
22889087 |
cttcaacagggttaatggtagcttctcagtatattcttggttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcct |
22888993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 27 - 316
Target Start/End: Complemental strand, 22880583 - 22880294
Alignment:
| Q |
27 |
tcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagtt |
126 |
Q |
| |
|
|||||||| | ||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||| |||||||| || |
|
|
| T |
22880583 |
tcgattcaaggatttatccctttccagtggatatcccatgcaggtatggattgactatgatggagtgaagaaaaagattgaggttacattagctccgatt |
22880484 |
T |
|
| Q |
127 |
agtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatctt |
226 |
Q |
| |
|
||||||||||||| | ||||||||| || || ||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
22880483 |
agtgttggttttaataataaaccaacacgacatttgttgtcattgaccaaagatctttctccaattctcaacaatagtatgtatgttggattatcatctt |
22880384 |
T |
|
| Q |
227 |
caacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttc |
316 |
Q |
| |
|
||||| |||| ||| ||||||||||||| ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
22880383 |
caacaaggttaattttagcttctcattatgttcttggttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgagcttc |
22880294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 105 - 319
Target Start/End: Complemental strand, 22885539 - 22885325
Alignment:
| Q |
105 |
tgatgttaccttagctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaataga |
204 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
22885539 |
tgatgttactttagctccaattagtgttggttttagtgataaaccaacacaacctttgttatcattgaccaaagatctttctccaatactcaacaataga |
22885440 |
T |
|
| Q |
205 |
atgtatgttggattctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaa |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
22885439 |
atgtatgttggattctcatcttcaacagggttaattgtagcttctcattatattcttggttggagttttaaggttaatagccaagctcaaaaccttgaaa |
22885340 |
T |
|
| Q |
305 |
tctctgaccttcctg |
319 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
22885339 |
tctctgaacttcctg |
22885325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 27 - 318
Target Start/End: Complemental strand, 22875908 - 22875623
Alignment:
| Q |
27 |
tcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagtt |
126 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||| | |
|
|
| T |
22875908 |
tcgattcagggatttatcccttttcagtggatatcccatgcaggtatggattgactatgatggagtgaaaaaaaagattgatgttactttagctccaata |
22875809 |
T |
|
| Q |
127 |
agtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatctt |
226 |
Q |
| |
|
|| | ||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22875808 |
gatgct------agtaataaaccaacacaacctttgttatcattgaccaaagatctttctccaattctcaacaatagaatgtatgttggattctcatctt |
22875715 |
T |
|
| Q |
227 |
caacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcct |
318 |
Q |
| |
|
||||||| || ||| ||||||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||| |
|
|
| T |
22875714 |
caacaggtttaattttagcttctcattatattcttggttggagttttaaggttaatggtcaagctcaaacccttgaaatctctgaacttcct |
22875623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 24 - 336
Target Start/End: Complemental strand, 22858457 - 22858142
Alignment:
| Q |
24 |
tggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctcca |
123 |
Q |
| |
|
||||||||||| | ||||||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
22858457 |
tggtcgattcaacgacttatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctcca |
22858358 |
T |
|
| Q |
124 |
gttagtgttggtttta---gtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattct |
220 |
Q |
| |
|
||| | |||||| || | ||||||| || ||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22858357 |
attaattttggttgtaatgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattct |
22858258 |
T |
|
| Q |
221 |
catcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctgt |
320 |
Q |
| |
|
|||||||||| ||| | |||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
22858257 |
catcttcaaccggggtaattgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctga |
22858158 |
T |
|
| Q |
321 |
agtaagagtatttgct |
336 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
22858157 |
gctaagaatatttgct |
22858142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 45 - 309
Target Start/End: Complemental strand, 22805283 - 22805028
Alignment:
| Q |
45 |
ccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcat |
144 |
Q |
| |
|
|||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||| | |
|
|
| T |
22805283 |
cctttccagtggaaatcctatacaggtatggattgattatgatggagtgaagaaaaagattgatgttactttagctccagtttatgttgtt--------- |
22805193 |
T |
|
| Q |
145 |
aaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttcattgcag |
244 |
Q |
| |
|
||||||| | ||| |||||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22805192 |
aaaccaacaggaccttcgttatcaatgaccaaagatctttctccaattcttaacaatagtatgtatgttggattctcatcttcaacagggttacttgcag |
22805093 |
T |
|
| Q |
245 |
cttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctct |
309 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||| |
|
|
| T |
22805092 |
cttctcattatattcttggttggagttttaaggttaatggtcaagctcaaaaccttgtaatctct |
22805028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 59 - 319
Target Start/End: Complemental strand, 22809604 - 22809341
Alignment:
| Q |
59 |
atcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcat---aaaccaagaca |
155 |
Q |
| |
|
|||||||||| |||||||||||||||||||| | ||||||| |||||||| ||| ||||||||| ||| ||||||||||| | | ||||||| || |
|
|
| T |
22809604 |
atcctatgcatgtatggattgaatatgatggtgaaaagaaaaagattgatgctactttagctccaattaatgttggttttaatgttgttaaaccaacacg |
22809505 |
T |
|
| Q |
156 |
accgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttcattgcagcttctcattat |
255 |
Q |
| |
|
||| ||||||||| |||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||||| | ||| | ||||||||||| |
|
|
| T |
22809504 |
acctttgttatcattcaccaaagatctttctccaattcttaacactagtatgtatgttggattctcatcttcaacaggttctattctatcttctcattat |
22809405 |
T |
|
| Q |
256 |
attcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctg |
319 |
Q |
| |
|
||| |||||||||||||| ||||||||| ||||||||||||||||| |||||| | ||||||| |
|
|
| T |
22809404 |
gttcttggttggagttttaaggttaatggtcaagctcaaaaccttgatatctctaaacttcctg |
22809341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 319
Target Start/End: Complemental strand, 22893939 - 22893653
Alignment:
| Q |
24 |
tggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctcca |
123 |
Q |
| |
|
||||| ||||| |||| || ||||| |||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||| |
|
|
| T |
22893939 |
tggtcaattcaagaatataagccttatcagtggctatcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttactttagctcca |
22893840 |
T |
|
| Q |
124 |
gttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcat |
223 |
Q |
| |
|
||| ||||| | ||||||| |||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| |||| |
|
|
| T |
22893839 |
attaatgttgtt---------aaaccaaaacaacctttgttatcattgaccaaagatctttctccaattcttaacaatagtatgtatgttggattttcat |
22893749 |
T |
|
| Q |
224 |
cttcaacagggttcattgc-agcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctg |
319 |
Q |
| |
|
| | || || |||||| | | ||||||||||||||| |||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
22893748 |
cagctactgg-ttcatttctaacttctcattatattcttggttggagttttaagattaatggtcaagctcaaaaccttgtaatctctgaacttcctg |
22893653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 79 - 318
Target Start/End: Complemental strand, 22913605 - 22913375
Alignment:
| Q |
79 |
gaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaag |
178 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||| | ||||||| |||||| ||||||||||| ||||| |
|
|
| T |
22913605 |
gaatatgatggagtgaagaaaaagattgatgttactttagctccaattaatgttgtt---------aaaccaaaacaacctttgttatcattgaacaaag |
22913515 |
T |
|
| Q |
179 |
atctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggt |
278 |
Q |
| |
|
||||||| ||||||| |||| ||| ||||||||||||||||||||||||||||| | ||| | ||||||||||||||| |||||||||||||| ||| |
|
|
| T |
22913514 |
atctttcttcaattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattcttggttggagttttaaggt |
22913415 |
T |
|
| Q |
279 |
taatggccaagctcaaaaccttgaaatctctgaccttcct |
318 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||| |||||| |
|
|
| T |
22913414 |
taatggtcaagctcaaaatcttgtaatctctgaacttcct |
22913375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 59 - 318
Target Start/End: Complemental strand, 22898223 - 22897973
Alignment:
| Q |
59 |
atcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcataaaccaagacaacc |
158 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||| ||| ||||| | ||||||| |||||| |
|
|
| T |
22898223 |
atcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttactttagctccaattaatgttgtt---------aaaccaaaacaacc |
22898133 |
T |
|
| Q |
159 |
gacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttca--ttgcagcttctcattata |
256 |
Q |
| |
|
||| |||||||||| ||||||||| |||||| | |||||||| |||||||||||||| ||||| | || || |||| || || |||||||||||| |
|
|
| T |
22898132 |
tttgttgtcattgaccagagatctttctccaattttaaacaatagtatgtatgttggattttcatcagctactgg-ttcagttttca-cttctcattata |
22898035 |
T |
|
| Q |
257 |
ttcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcct |
318 |
Q |
| |
|
||| |||||||||||||| ||||||||| |||||| ||||||||| ||||||||| |||||| |
|
|
| T |
22898034 |
ttcttggttggagttttaaggttaatggtcaagctgaaaaccttgtaatctctgaacttcct |
22897973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 59 - 318
Target Start/End: Complemental strand, 22826209 - 22825959
Alignment:
| Q |
59 |
atcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcataaaccaagacaacc |
158 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | || |||| |||||||||||| ||||||||| ||| ||||| |||||||| |||||| |
|
|
| T |
22826209 |
atcctatgcaggtatggatagaatatgatggtgaaaataaaaagattgatgttactttagctccaattaatgttg---------ttaaaccaaaacaacc |
22826119 |
T |
|
| Q |
159 |
gacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttca--ttgcagcttctcattata |
256 |
Q |
| |
|
||| |||||||||| ||||||| | |||||| | |||||||| |||||||||||||||||||| | || |||||| || || |||||||||||| |
|
|
| T |
22826118 |
tttgttttcattgaccagagatcttcctccaattttgaacaatagtatgtatgttggattctcatcagctac-tggttcagttttca-cttctcattata |
22826021 |
T |
|
| Q |
257 |
ttcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcct |
318 |
Q |
| |
|
||| |||||| ||||||| | ||||||| ||||||||||| |||| ||| ||||| |||||| |
|
|
| T |
22826020 |
ttcttggttgaagttttaagcttaatggtcaagctcaaaatcttgtaatttctgaacttcct |
22825959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 38 - 378
Target Start/End: Original strand, 21150733 - 21151073
Alignment:
| Q |
38 |
atttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttt |
137 |
Q |
| |
|
||||||||||| ||||||| |||||||||| |||||||||||||||||||| | ||||| | |||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
21150733 |
atttatcccttttcagtggatatcctatgcatgtatggattgaatatgatggtgaaaagaagaagattaatgttactttagctccaattagtgttggttt |
21150832 |
T |
|
| Q |
138 |
tagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttc |
237 |
Q |
| |
|
|| | | |||||| | ||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21150833 |
taataaaaaaccagcaagacctttgttatcattgaccaaagatctttctccagttctcaacaatagtatgtatgttggattctcatcttcaacagggtta |
21150932 |
T |
|
| Q |
238 |
attgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctgtagtaagagtatttgctg |
337 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||| ||| |
|
|
| T |
21150933 |
cttgcagcttctcattatattcttggttggagttttaaggttaatggcctggctcaaaaccttgaaatctctgaacttcctgaagtaacagtattttctg |
21151032 |
T |
|
| Q |
338 |
agnnnnnnnngtccaaatttttaactgttaggttgcctttg |
378 |
Q |
| |
|
|| ||||||||||||||| |||| ||||||||| |
|
|
| T |
21151033 |
agaaaaaaaaatccaaatttttaactattagtttgcctttg |
21151073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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