View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19916_low_50 (Length: 227)
Name: NF19916_low_50
Description: NF19916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19916_low_50 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17147812 - 17148032
Alignment:
| Q |
1 |
caaaattaacttcaaattcaaacaatcttaacccttaagttgagatacattattgcatgatgcaataaatgtaagaaatccaaatcccttctttttgccc |
100 |
Q |
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| T |
17147812 |
caaaattaacttcaaattcaaacaatcttaacccttaagttgagatgcattattgcatgatgcaataaatgtaagaaatccaaatcccttctttttgccc |
17147911 |
T |
|
| Q |
101 |
tagacaactcaactgcaccacaattaagaccaaaaatgattcactttgaaaatggaactataccccacatccataaatgcccacgagtgagtaataattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17147912 |
tagacaactcaactgcaccacaattaagaccaaaaatgattcactttgaaaatggaactataccccacatccataaatgcccacgagtgagtaataattc |
17148011 |
T |
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| Q |
201 |
acagacaatcactgagccctg |
221 |
Q |
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||||||||||||||||||||| |
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| T |
17148012 |
acagacaatcactgagccctg |
17148032 |
T |
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