View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19917_high_34 (Length: 289)
Name: NF19917_high_34
Description: NF19917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19917_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 8 - 270
Target Start/End: Complemental strand, 49042587 - 49042325
Alignment:
| Q |
8 |
cagcacagacatggataaagaaagactaacggcggagatggatttcaaagattcaacctccgccgttatcaaaatccggcgacgtttaccggattttcta |
107 |
Q |
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| T |
49042587 |
cagcatagacatggataaagaaagactaacggcggagatggatttcaaagattcaacctccgccgttatcaaaatccggcgacgtttaccggattttcta |
49042488 |
T |
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| Q |
108 |
caaacggtgaaactcaagtacgtaaagttaggttatggctattcatgcaatgccacaaccattctcattttcacattcgtcgtccctctcttactcttcc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49042487 |
caaacggtgaaactcaagtacgtaaagttaggttatggctattcatgcaatgccacaaccattctcattttcacattcgtcgtccctctcttactcttcc |
49042388 |
T |
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| Q |
208 |
tcaccgttcagttccaactcaccgatctaaaactccaccgtctctcacaactcttactcgaac |
270 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49042387 |
tcaccgttcagttccaactcaccgatctaaaactccaccgtctctcacaactcttactcgaac |
49042325 |
T |
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