View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19917_high_56 (Length: 243)
Name: NF19917_high_56
Description: NF19917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19917_high_56 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 43965754 - 43965978
Alignment:
| Q |
1 |
gggaaaatcaacgtcgattcctctgatcttgtacgtcggcattttcttggttcctgattgaaaccgaaaacagaaatgaatcaatgcttttctcccagag |
100 |
Q |
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| T |
43965754 |
gggaaaatcaacgtcgattcctctgatcttgtacgtcggcattttcttggttcctgattgaaaccgaaaacagaaatgaatcaatgcttttctcccagag |
43965853 |
T |
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| Q |
101 |
tttgcatttgtatgaactttgattgaagaagaaagatgtattgaaccctaatttttgcactggctagtggctagtgatggaggggtgtataattttcccg |
200 |
Q |
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||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43965854 |
tttgcatttgtatgaactttggttgaagaggaaagatgtattgaaccctaatttttgcactggctagtggctagtgatggaggggtgtataattttcccg |
43965953 |
T |
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| Q |
201 |
ccaacgcgcccgagttcagtcaaac |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
43965954 |
ccaacgcgcccgagttcagtcaaac |
43965978 |
T |
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