View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19917_low_25 (Length: 336)
Name: NF19917_low_25
Description: NF19917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19917_low_25 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 99 - 320
Target Start/End: Original strand, 1503592 - 1503813
Alignment:
| Q |
99 |
aaagtcttcattgtggtgtgctaataaatatattgttaataaagactttcttttgaaacatggggaaaaaacatatttttatgtaatggggttaagttta |
198 |
Q |
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| T |
1503592 |
aaagtcttcattgtggtgtgctaataaatatattgtgaataaagactttcttttgaaacatggggaaaaaacatatttttatgtaatggggttaagttta |
1503691 |
T |
|
| Q |
199 |
aaatttgacgtttttggcaacatcgcaatgcatgtgtcaatcaggtatacatttgattttgctcttcttcattggtccttgtttgtttgcttcttttcat |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1503692 |
aaatttgacgtttttggcaacatcgcaatgcatgtgtcaatcaggtatacatttgattttgctcttcttcattggtccttgtttgtttgcttcttttcat |
1503791 |
T |
|
| Q |
299 |
ttttatagtttaaatattttct |
320 |
Q |
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|||||||||||||||||||||| |
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| T |
1503792 |
ttttatagtttaaatattttct |
1503813 |
T |
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