View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19917_low_32 (Length: 295)

Name: NF19917_low_32
Description: NF19917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19917_low_32
NF19917_low_32
[»] chr1 (49 HSPs)
chr1 (117-211)||(48497886-48497979)
chr1 (118-210)||(31488122-31488213)
chr1 (118-206)||(7334802-7334889)
chr1 (118-206)||(24370362-24370449)
chr1 (118-206)||(38979928-38980015)
chr1 (118-206)||(46448314-46448401)
chr1 (118-204)||(5598615-5598700)
chr1 (118-204)||(37708455-37708540)
chr1 (122-211)||(1039798-1039886)
chr1 (122-211)||(1046704-1046792)
chr1 (118-203)||(27526928-27527012)
chr1 (118-211)||(32322551-32322643)
chr1 (118-206)||(20258148-20258235)
chr1 (118-206)||(37483151-37483238)
chr1 (118-206)||(44114392-44114479)
chr1 (118-206)||(50138590-50138677)
chr1 (118-206)||(50227787-50227874)
chr1 (118-206)||(14244433-14244521)
chr1 (118-206)||(6137330-6137417)
chr1 (122-206)||(7049454-7049537)
chr1 (120-204)||(12501643-12501726)
chr1 (118-206)||(52179246-52179333)
chr1 (118-206)||(15073801-15073889)
chr1 (118-206)||(33145824-33145912)
chr1 (118-202)||(38902530-38902614)
chr1 (122-206)||(6714303-6714386)
chr1 (125-209)||(9478498-9478581)
chr1 (118-206)||(24231360-24231447)
chr1 (118-206)||(44114109-44114198)
chr1 (118-201)||(49548220-49548302)
chr1 (122-211)||(28049883-28049972)
chr1 (118-206)||(7121430-7121518)
chr1 (125-206)||(36985862-36985942)
chr1 (118-206)||(8678369-8678459)
chr1 (151-206)||(32319981-32320036)
chr1 (122-204)||(3322805-3322886)
chr1 (222-284)||(48499733-48499795)
chr1 (118-206)||(36966897-36966985)
chr1 (118-206)||(32193871-32193957)
chr1 (157-206)||(33171728-33171777)
chr1 (118-206)||(34022566-34022653)
chr1 (158-209)||(33784504-33784555)
chr1 (151-206)||(36214166-36214221)
chr1 (118-204)||(42617070-42617157)
chr1 (151-210)||(49148325-49148384)
chr1 (161-206)||(35368982-35369027)
chr1 (118-206)||(45679131-45679218)
chr1 (118-164)||(3798627-3798672)
chr1 (118-206)||(32193616-32193705)
[»] scaffold0005 (1 HSPs)
scaffold0005 (118-206)||(1571-1658)
[»] chr8 (46 HSPs)
chr8 (118-206)||(40448823-40448910)
chr8 (118-206)||(41154888-41154975)
chr8 (118-210)||(13089535-13089626)
chr8 (118-206)||(26060506-26060593)
chr8 (118-206)||(45123318-45123405)
chr8 (118-204)||(11713297-11713382)
chr8 (118-204)||(25825178-25825263)
chr8 (118-204)||(45465852-45465937)
chr8 (117-206)||(9739372-9739460)
chr8 (117-210)||(762039-762133)
chr8 (118-206)||(40229513-40229600)
chr8 (118-206)||(42193876-42193963)
chr8 (118-206)||(43978917-43979004)
chr8 (118-202)||(44978217-44978300)
chr8 (118-205)||(41836590-41836676)
chr8 (118-204)||(33098846-33098931)
chr8 (118-206)||(3292114-3292202)
chr8 (121-209)||(31445770-31445858)
chr8 (118-206)||(22013826-22013913)
chr8 (118-206)||(41658498-41658585)
chr8 (118-206)||(14897268-14897357)
chr8 (120-206)||(4413258-4413343)
chr8 (118-203)||(7116570-7116654)
chr8 (118-199)||(9807058-9807138)
chr8 (119-203)||(9115701-9115784)
chr8 (118-206)||(11760536-11760623)
chr8 (118-206)||(27786359-27786446)
chr8 (118-206)||(31988772-31988861)
chr8 (120-206)||(37035488-37035574)
chr8 (118-204)||(2620338-2620423)
chr8 (120-206)||(45433852-45433937)
chr8 (118-206)||(14724200-14724287)
chr8 (134-206)||(42193979-42194050)
chr8 (118-206)||(43633220-43633309)
chr8 (118-204)||(30864257-30864342)
chr8 (118-206)||(2221691-2221778)
chr8 (118-202)||(43086483-43086568)
chr8 (125-194)||(8272359-8272427)
chr8 (121-204)||(7775099-7775182)
chr8 (157-204)||(3443166-3443213)
chr8 (151-204)||(8000678-8000731)
chr8 (151-196)||(18475687-18475732)
chr8 (125-191)||(32809991-32810057)
chr8 (121-206)||(7791749-7791834)
chr8 (164-206)||(15271254-15271296)
chr8 (118-178)||(2088094-2088153)
[»] chr5 (33 HSPs)
chr5 (118-206)||(7265345-7265432)
chr5 (118-206)||(11079504-11079591)
chr5 (118-206)||(17339891-17339978)
chr5 (118-206)||(35001329-35001416)
chr5 (118-204)||(6157373-6157458)
chr5 (118-206)||(35774055-35774143)
chr5 (118-206)||(1031175-1031262)
chr5 (118-206)||(26888809-26888896)
chr5 (118-211)||(9050307-9050399)
chr5 (134-211)||(25586668-25586744)
chr5 (117-202)||(29961906-29961990)
chr5 (118-210)||(27850913-27851004)
chr5 (118-206)||(21591963-21592050)
chr5 (118-206)||(21596080-21596167)
chr5 (126-206)||(27098873-27098952)
chr5 (118-206)||(16669899-16669988)
chr5 (118-206)||(30112582-30112671)
chr5 (118-211)||(27122009-27122101)
chr5 (120-200)||(4077295-4077374)
chr5 (118-202)||(39023550-39023633)
chr5 (151-202)||(3721703-3721754)
chr5 (152-201)||(14349055-14349104)
chr5 (151-206)||(4821727-4821783)
chr5 (118-206)||(4959977-4960064)
chr5 (151-211)||(5595705-5595765)
chr5 (118-181)||(1095592-1095654)
chr5 (160-206)||(24100327-24100373)
chr5 (157-203)||(39010277-39010323)
chr5 (151-211)||(35810239-35810300)
chr5 (151-211)||(13668146-13668206)
chr5 (163-206)||(5187004-5187047)
chr5 (120-182)||(14232993-14233054)
chr5 (118-174)||(24099836-24099891)
[»] chr4 (38 HSPs)
chr4 (118-206)||(1098150-1098237)
chr4 (118-209)||(17475494-17475584)
chr4 (118-206)||(42369224-42369311)
chr4 (118-211)||(40256194-40256286)
chr4 (118-206)||(17258962-17259049)
chr4 (122-206)||(25618537-25618619)
chr4 (118-206)||(46307652-46307739)
chr4 (118-205)||(11649601-11649687)
chr4 (118-201)||(46849460-46849542)
chr4 (120-206)||(46058998-46059083)
chr4 (118-204)||(46580045-46580130)
chr4 (118-206)||(39321158-39321246)
chr4 (118-206)||(14947282-14947369)
chr4 (118-206)||(31488075-31488162)
chr4 (118-206)||(44303612-44303699)
chr4 (122-206)||(48453880-48453963)
chr4 (119-206)||(3503844-3503930)
chr4 (118-209)||(24045718-24045808)
chr4 (118-204)||(20614491-20614576)
chr4 (119-211)||(22679972-22680064)
chr4 (118-206)||(28504675-28504762)
chr4 (121-210)||(56271086-56271174)
chr4 (118-206)||(5904602-5904688)
chr4 (118-206)||(14525811-14525898)
chr4 (118-202)||(41610224-41610307)
chr4 (118-206)||(42018761-42018848)
chr4 (134-211)||(9181490-9181566)
chr4 (118-206)||(22309337-22309427)
chr4 (118-206)||(31262097-31262185)
chr4 (117-202)||(37208411-37208495)
chr4 (118-211)||(39829545-39829637)
chr4 (118-206)||(52574773-52574858)
chr4 (151-210)||(53652901-53652960)
chr4 (118-211)||(54037548-54037640)
chr4 (151-206)||(41845619-41845674)
chr4 (118-211)||(48091845-48091936)
chr4 (152-204)||(51624386-51624438)
chr4 (118-168)||(34237860-34237909)
[»] chr3 (33 HSPs)
chr3 (118-206)||(2814598-2814685)
chr3 (118-211)||(6098726-6098818)
chr3 (118-211)||(11218714-11218806)
chr3 (118-206)||(31048659-31048746)
chr3 (118-206)||(51676011-51676098)
chr3 (118-206)||(53246193-53246280)
chr3 (119-206)||(32309230-32309316)
chr3 (118-206)||(13355600-13355688)
chr3 (118-202)||(39198514-39198597)
chr3 (118-206)||(45940554-45940641)
chr3 (118-206)||(48946273-48946359)
chr3 (124-206)||(12740228-12740308)
chr3 (118-209)||(29191670-29191762)
chr3 (118-201)||(24242875-24242958)
chr3 (118-206)||(40503336-40503423)
chr3 (118-202)||(44711657-44711740)
chr3 (120-206)||(36174609-36174695)
chr3 (118-211)||(15986718-15986809)
chr3 (118-206)||(41263123-41263211)
chr3 (118-206)||(47872613-47872701)
chr3 (118-206)||(876065-876152)
chr3 (118-194)||(45533699-45533774)
chr3 (118-205)||(36876951-36877036)
chr3 (120-206)||(967353-967438)
chr3 (118-205)||(27989898-27989986)
chr3 (151-205)||(29587438-29587492)
chr3 (151-204)||(744364-744417)
chr3 (118-206)||(755730-755818)
chr3 (120-211)||(44475406-44475497)
chr3 (122-183)||(5408293-5408353)
chr3 (134-211)||(38731578-38731654)
chr3 (120-204)||(28919451-28919534)
chr3 (164-206)||(9242211-9242253)
[»] chr2 (39 HSPs)
chr2 (117-206)||(2970432-2970520)
chr2 (118-211)||(38807055-38807147)
chr2 (118-206)||(5381632-5381719)
chr2 (118-206)||(25478919-25479006)
chr2 (118-206)||(31557187-31557274)
chr2 (118-204)||(18469945-18470030)
chr2 (117-207)||(25334254-25334343)
chr2 (118-206)||(13479306-13479393)
chr2 (118-206)||(14288194-14288281)
chr2 (118-206)||(26424700-26424787)
chr2 (118-206)||(33200399-33200486)
chr2 (118-206)||(34618396-34618483)
chr2 (118-206)||(43819918-43820005)
chr2 (118-204)||(18064305-18064390)
chr2 (118-206)||(677793-677881)
chr2 (118-211)||(16712714-16712806)
chr2 (118-211)||(20558763-20558855)
chr2 (118-206)||(4979810-4979897)
chr2 (118-206)||(4997721-4997808)
chr2 (118-206)||(17977972-17978059)
chr2 (118-202)||(32194539-32194622)
chr2 (118-206)||(2822554-2822642)
chr2 (122-206)||(14848077-14848160)
chr2 (118-206)||(15136447-15136534)
chr2 (118-206)||(21532619-21532706)
chr2 (118-206)||(25882394-25882481)
chr2 (118-201)||(38536499-38536581)
chr2 (151-204)||(39107352-39107405)
chr2 (118-206)||(39109377-39109465)
chr2 (124-206)||(7674520-7674601)
chr2 (118-206)||(4602572-4602658)
chr2 (140-204)||(12466173-12466236)
chr2 (118-206)||(36313308-36313395)
chr2 (125-204)||(11713408-11713488)
chr2 (118-206)||(5381890-5381979)
chr2 (151-206)||(12966114-12966170)
chr2 (118-169)||(4844145-4844195)
chr2 (171-206)||(20237299-20237334)
chr2 (151-206)||(35668544-35668600)
[»] scaffold0054 (1 HSPs)
scaffold0054 (118-206)||(57433-57520)
[»] chr7 (41 HSPs)
chr7 (118-206)||(23140126-23140213)
chr7 (118-206)||(31851957-31852044)
chr7 (118-206)||(18458374-18458461)
chr7 (118-206)||(22569680-22569767)
chr7 (118-206)||(27284338-27284425)
chr7 (118-206)||(29414203-29414290)
chr7 (118-206)||(36951450-36951537)
chr7 (118-206)||(37374064-37374151)
chr7 (118-206)||(39143386-39143473)
chr7 (118-206)||(48095237-48095324)
chr7 (118-204)||(36720868-36720953)
chr7 (121-210)||(23910952-23911040)
chr7 (118-206)||(41692274-41692362)
chr7 (117-206)||(43705265-43705353)
chr7 (118-206)||(5905406-5905493)
chr7 (118-206)||(5905578-5905665)
chr7 (118-206)||(7776554-7776641)
chr7 (118-206)||(20493842-20493929)
chr7 (122-206)||(24733729-24733812)
chr7 (118-202)||(32072394-32072477)
chr7 (118-206)||(40852034-40852121)
chr7 (118-206)||(45456831-45456918)
chr7 (118-210)||(45995654-45995745)
chr7 (118-204)||(35918615-35918700)
chr7 (118-211)||(47987661-47987751)
chr7 (118-206)||(3217327-3217415)
chr7 (118-206)||(23440557-23440645)
chr7 (118-206)||(712936-713023)
chr7 (120-206)||(5869846-5869931)
chr7 (118-200)||(14708316-14708398)
chr7 (118-200)||(17489614-17489696)
chr7 (118-200)||(17563518-17563600)
chr7 (118-206)||(34621659-34621746)
chr7 (151-206)||(15573263-15573318)
chr7 (118-211)||(41911371-41911464)
chr7 (151-200)||(28460682-28460731)
chr7 (118-202)||(42287688-42287772)
chr7 (151-211)||(21432930-21432990)
chr7 (151-191)||(751707-751747)
chr7 (151-206)||(29771138-29771193)
chr7 (151-211)||(38444739-38444799)
[»] chr6 (15 HSPs)
chr6 (118-206)||(714924-715011)
chr6 (118-206)||(3366872-3366959)
chr6 (118-206)||(10915038-10915125)
chr6 (118-206)||(3618878-3618965)
chr6 (118-206)||(9424782-9424869)
chr6 (118-206)||(21271583-21271670)
chr6 (118-206)||(29175398-29175485)
chr6 (118-206)||(31739790-31739877)
chr6 (118-206)||(26392718-26392806)
chr6 (118-210)||(13703724-13703815)
chr6 (118-206)||(18683810-18683897)
chr6 (118-206)||(13839743-13839830)
chr6 (118-206)||(14527393-14527480)
chr6 (125-206)||(22498477-22498557)
chr6 (168-206)||(34751572-34751610)
[»] scaffold0006 (1 HSPs)
scaffold0006 (118-202)||(83110-83193)
[»] scaffold0027 (2 HSPs)
scaffold0027 (118-206)||(125312-125399)
scaffold0027 (118-206)||(40478-40564)
[»] scaffold0018 (1 HSPs)
scaffold0018 (118-206)||(133450-133537)
[»] scaffold0009 (1 HSPs)
scaffold0009 (118-206)||(242036-242123)
[»] scaffold0014 (1 HSPs)
scaffold0014 (118-206)||(231130-231219)
[»] scaffold0482 (1 HSPs)
scaffold0482 (121-206)||(79-164)
[»] scaffold0043 (1 HSPs)
scaffold0043 (157-211)||(60124-60178)


Alignment Details
Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 48497886 - 48497979
Alignment:
Q  117 aagtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  48497886 aagtctcgttttggtcccttctgttagatttc-cgttaggtttaataaaaaatgtttagtgtgggcacgtgtcaccttgtcattggctctaagaa 48497979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 31488122 - 31488213
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  31488122 agtctcgttttggtcacttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctctaaga 31488213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 7334889 - 7334802
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  7334889 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 7334802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 24370449 - 24370362
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  24370449 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 24370362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 38980015 - 38979928
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  38980015 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 38979928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 46448314 - 46448401
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| ||||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  46448314 agtctcattttggtctcttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 46448401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 5598615 - 5598700
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5598615 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 5598700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 37708540 - 37708455
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37708540 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 37708455  T

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Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 1039798 - 1039886
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||    
T  1039798 tcgttttggtctcttctgttagatttc-cgttaagtttaataaaaaacgttatgtgtggacacgtgtcaccttgtcattggctctgagaa 1039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 1046704 - 1046792
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||    
T  1046704 tcgttttggtctcttctgttagatttc-cgttaagtttaataaaaaacgttatgtgtggacacgtgtcaccttgtcattggctctgagaa 1046792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 27526928 - 27527012
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggc 203  Q
    |||||||||||||||  ||||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  27526928 agtctcgttttggtccattctgttaggtttc-cgttaggtttaataaaaaacgtttagtgtggacacgtgtcaccttgtcattggc 27527012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 32322643 - 32322551
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||| ||||| |||| |||||||||||||||||||||| ||||    
T  32322643 agtctcgctttggtcccttctgttagattt-tcgttaggtttaataaaaaacgttaagtgtagacacgtgtcaccttgtcattggctctgagaa 32322551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 20258235 - 20258148
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  20258235 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcgccttgtcattggctct 20258148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 37483151 - 37483238
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  37483151 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgttaccttgtcattggctct 37483238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 44114479 - 44114392
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  44114479 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacatgtcaccttgtcattggctct 44114392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 50138590 - 50138677
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  50138590 agtctcgttttggtcccttctgttaggtttc-cgttagttttgataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 50138677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 50227874 - 50227787
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  50227874 agtctcgttttggtcccttctgttagatttc-cgttagttttaataaaaaacattaagtgtggacacatgtcaccttgtcattggctct 50227787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 14244521 - 14244433
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||| |||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  14244521 agtctcgttttggtcccttctgttaggttt-tcgttagagttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 14244433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 6137330 - 6137417
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||| || |||||||||| |||| |||||  |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  6137330 agtctcgttttgatcccttctgttaggtttc-cgttaattttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 6137417  T

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Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 7049537 - 7049454
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||| ||||||||| ||||| |||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  7049537 tcgttttggtcccttctgttaaatttc-cgttaggtttaataaaaaacgttatgtgtggacacgtgtcaccttgtcattggctct 7049454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 12501726 - 12501643
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||||||||| || |||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  12501726 tctcgttttgatcccttctgttaggtttc-cgttagatttaataaaaaacgttaagtgtggacacgtgtcaccttgtgattggct 12501643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 52179333 - 52179246
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||||||||| || ||||| |||| ||||||||||||||||||||||    
T  52179333 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaactttaagtgttgacacgtgtcaccttgtcattggctct 52179246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 15073889 - 15073801
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| ||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  15073889 agtcttgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 15073801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 33145912 - 33145824
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| ||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  33145912 agtcttgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 33145824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 38902530 - 38902614
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||    
T  38902530 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattgg 38902614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 6714303 - 6714386
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||| |||||||||  |||| |||||| |||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  6714303 tcgttttggtcccttctgttaagtttc-cgttagttttaataaaaaacgttaagtgtggacacgggtcaccttgtcattggctct 6714386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 9478581 - 9478498
Alignment:
Q  125 ttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaag 209  Q
    |||| ||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  9478581 ttttagtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggttctaag 9478498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 24231447 - 24231360
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| |||||| ||| ||||||||||||||||| ||||    
T  24231447 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaagttaagtgtgaacacgtgtcaccttgtcattgactct 24231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 44114109 - 44114198
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||| || ||||||||||||||| |||||| ||||||||||||  |||| |||||| ||| ||||||||||||||||||||||    
T  44114109 agtctcgttttgatcccttctgttagatttc-cgttagttttaataaaaaaaacgttaagtgtgaacacgtgtcaccttgtcattggctct 44114198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 49548220 - 49548302
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattg 201  Q
    |||||||||||| || |||||||||| |||| |||||| |||||||||||||||| |||| ||||| |||||||||||||||||    
T  49548220 agtctcgttttgatcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgcggacacgtgtcaccttgtcattg 49548302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 28049972 - 28049883
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaac-gtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||| |||||||||| |||| |||||| ||||||||||||  ||| ||||||||||  ||||||||||||||||||||||||||    
T  28049972 tcgttttggtcgcttctgttaggtttc-cgttaggtttaataaaaaaatgttaagtgtggacacatgtcaccttgtcattggctctaagaa 28049883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 7121430 - 7121518
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| ||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| |||||||||||| |||||||||    
T  7121430 agtcttgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtaattggctct 7121518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 36985942 - 36985862
Alignment:
Q  125 ttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||| ||| |||||| |||| |||||| ||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  36985942 ttttggtcccttatgttaggtttc-cgttaggtttaataaaaaacattaagtgtggacacgtgtcaccttgtcattggctct 36985862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 8678459 - 8678369
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgttta-gtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||| ||||||| ||||||||||||  |||||| ||||||||| ||| ||||||||||||||||||    
T  8678459 agtctcgttttggtcccttctgttaggttt-tcgttagttttaataaaaaaaacgtttaagtgtggacacgtgccaccttgtcattggctct 8678369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 32319981 - 32320036
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  32319981 gttaggtttaataaaaaacattaagtgtggacatgtgtcaccttgtcattggctct 32320036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 3322805 - 3322886
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||| |||||||||| |||| |||||| | |||||||||| ||| |||||||||| |||||||||| |||||||||    
T  3322805 tcgttttggtcccttctgttaggtttc-cgttaggtctaataaaaaatgttaagtgtggacaagtgtcaccttatcattggct 3322886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 48499733 - 48499795
Alignment:
Q  222 atacattgtccctgccagctgagttaagctaacaacactgattctaatttaaaactgcatatt 284  Q
    ||||||||| |||  |||||||| ||||||||||||||||||||| |||||||||||||||||    
T  48499733 atacattgttcctatcagctgagctaagctaacaacactgattctgatttaaaactgcatatt 48499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 36966897 - 36966985
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaac-gtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||||||||| |||| |||||| ||||||||||||  ||| ||||||| || ||||||||||||||||||||||    
T  36966897 agtctcgttttggtcctttctgttaggtttc-cgttagttttaataaaaaaatgttaagtgtgggcacgtgtcaccttgtcattggctct 36966985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 32193957 - 32193871
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||| |||| ||||| ||||| |||||||||||| ||| ||||||| || |||||||||| |||||||||||    
T  32193957 agtctcgttttggtcccttctattaggtttct-gttagttttaataaaaaa-gttaagtgtgggcacgtgtcaccttatcattggctct 32193871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 33171777 - 33171728
Alignment:
Q  157 tttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  33171777 tttaataaaaaactttaagtgtggacacgtgtcaccttgtcattggctct 33171728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 34022566 - 34022653
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| ||| || | |||||||||| |||| |||||||||| |||||||||||| |||||||||    
T  34022566 agtctcgttttggtcccttctgttaggtttc-cgtcagttctaataaaaaaacgttaagtgtggacacgtgtcaccttgt-attggctct 34022653  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 33784555 - 33784504
Alignment:
Q  158 ttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaag 209  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||| ||||||    
T  33784555 ttaataaaaaacgttaagtgtggacacgtgtcaccttatcattggttctaag 33784504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 36214221 - 36214166
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||   |||||| |||||||||| ||||||||||||||||||||||    
T  36214221 gttagatttaatattcaacgttaagtgtggacacgtgtcaccttgtcattggctct 36214166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 42617157 - 42617070
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataa---aaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||||||||||||| ||||||||||  |||| |||||| ||||||||   |||||||| ||||||||||  |||||||||||||||||||    
T  42617157 agtctcgttttggt-tcttctgttatgtttc-cgttaggtttaataataaaaaacgttaagtgtggacacatgtcaccttgtcattggct 42617070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 49148325 - 49148384
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    ||||| |||||||||||||||| |||| ||||| ||| ||||||| ||||||||||||||    
T  49148325 gttaggtttaataaaaaacgttaagtgcggacacgtgccaccttgccattggctctaaga 49148384  T

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Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 35368982 - 35369027
Alignment:
Q  161 ataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||    
T  35368982 ataaaaaacgttaagtgtggacacgtgtcactttgtcattggctct 35369027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 45679218 - 45679131
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||  |||| ||| ||  ||   |||||| ||| |||||||||| ||||||||||||||||||||||    
T  45679218 agtctcgttttggtcccttctgttaagtttc-cgtcagggttttaaaaaaaagttaagtgtggacacgtgtcaccttgtcattggctct 45679131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 3798672 - 3798627
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataa 164  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  3798672 agtctcgttttggtcccttctgttagatttc-cgttagttttaataa 3798627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 32193616 - 32193705
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagattta-ataaaaaacgtttagtg-tggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||  | |||||| ||| | |  |||||||||||||||||||||||||||||    
T  32193616 agtctcgttttggtcccttctgttaggtttc-cgttaggtttttaaaaaaaaagttaacttctggacatgtgtcaccttgtcattggctct 32193705  T

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Target: scaffold0005 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 1571 - 1658
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  1571 agtctcgttttggtcccttctgttagatttc-cgttagttttaataaaaaatgttaagtgtggacatgtgtcaccttgtcattggctct 1658  T

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Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 40448823 - 40448910
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  40448823 agtctcgttttggtctcttctgttaggttt-tcgttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 40448910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 41154975 - 41154888
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  41154975 agtctcgttttggtcccttctgttagatttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 41154888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 13089535 - 13089626
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  13089535 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacatgtcaccttgtcattggctctaaga 13089626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 26060593 - 26060506
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  26060593 agtctcgttttggtcccttctgttagatttct-gttagttttaataaaaaacgttaggtgtggacacgtgtcaccttgtcattggctct 26060506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 45123318 - 45123405
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  45123318 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 45123405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 11713297 - 11713382
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  11713297 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 11713382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 25825263 - 25825178
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  25825263 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 25825178  T

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Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 45465852 - 45465937
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  45465852 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 45465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 9739372 - 9739460
Alignment:
Q  117 aagtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||| ||| |||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  9739372 aagtctcgttttggtcccttatgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 9739460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 762133 - 762039
Alignment:
Q  117 aagtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    |||||||||||||||| |||||||||| ||| ||||||| ||||||||||||  |||| |||||||||| ||||||||||||||||||||||||||    
T  762133 aagtctcgttttggtcccttctgttaggttt-tcgttagttttaataaaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctctaaga 762039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 40229600 - 40229513
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  40229600 agtctcgttttggtctcttctgttaggtttc-cgttggttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattgactct 40229513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 42193876 - 42193963
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  42193876 agtctcgttttggtcccttctgttaggtttct-gttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgacattggctct 42193963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 43979004 - 43978917
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||| ||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  43979004 agtctcgttttagtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 43978917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 44978300 - 44978217
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||||||||||||| |||||||||| ||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  44978300 agtctcgttttggtcccttctgttaggttt-tcgttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattgg 44978217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 41836590 - 41836676
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctc 205  Q
    |||||| ||||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  41836590 agtctcattttggtctcttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttctcattggctc 41836676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 33098931 - 33098846
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||| |||||||||||||    
T  33098931 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcatcttgtcattggct 33098846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 3292114 - 3292202
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  3292114 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 3292202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 31445770 - 31445858
Alignment:
Q  121 ctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtca-ttggctctaag 209  Q
    |||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||| |||||||||||    
T  31445770 ctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcatttggctctaag 31445858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 22013913 - 22013826
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||  |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  22013913 agtctcgttttggtcccttctgttaggtttc-cgttaattttaataaaaaatgttaagtgtggacacgtgtcaccttgtcattggctct 22013826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 41658498 - 41658585
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||| |||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  41658498 agtctcgttttggtcccttatgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttatcattggctct 41658585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 14897357 - 14897268
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  14897357 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 14897268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 4413258 - 4413343
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||| ||| |||||| ||| ||||||| |||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  4413258 tctcgttttggtcccttatgttaggttt-tcgttagttttaataaaaaacgttgagtgtggacacgcgtcaccttgtcattggctct 4413343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 7116570 - 7116654
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggc 203  Q
    ||||||||||||||  |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  7116570 agtctcgttttggtgccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcacattgtcattggc 7116654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 9807058 - 9807138
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcat 199  Q
    |||||||||||||||  ||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  9807058 agtctcgttttggtccattctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcat 9807138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 9115701 - 9115784
Alignment:
Q  119 gtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggc 203  Q
    ||||||||||| |  |||||||||| |||| |||||| |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  9115701 gtctcgttttgattccttctgttaggtttc-cgttaggtttaataaaaaatgttaagtgtggacatgtgtcaccttgtcattggc 9115784  T

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Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 11760536 - 11760623
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||||||||  || |||||||||| ||||||||||||| ||||||||    
T  11760536 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaatattaagtgtggacacgtgtcaccttgtcgttggctct 11760623  T

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Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 27786446 - 27786359
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| ||| |||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  27786446 agtctcatttcggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcgttggctct 27786359  T

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Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 31988861 - 31988772
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||  |||||||||| |||| |||||| ||||||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  31988861 agtctcgttttggtgccttctgttaggtttc-cgttagttttaataaaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 31988772  T

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Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 37035488 - 37035574
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||| |||||||||  |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  37035488 tctcgttttggtcccttctgttaagtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 37035574  T

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Target: chr8; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 2620338 - 2620423
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||||||||||| || |||||||||| |||| |||||| |||| ||||||||||| |||||||||| ||||||| ||||||||||||    
T  2620338 agtctcgttttgttcccttctgttaggtttc-cgttagttttactaaaaaacgttaagtgtggacacgtgtcacattgtcattggct 2620423  T

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Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 45433852 - 45433937
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||| || |||||||||| |||| |||||| |||||||||||||||| |||||| ||| ||||||||||||||||| ||||    
T  45433852 tctcgttttgatcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtgaacacgtgtcaccttgtcattgactct 45433937  T

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Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 14724200 - 14724287
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| ||| || |||| ||||||||||| |||||||||| ||||||| || |||||||||||    
T  14724200 agtctcgttttggtcccttctgttaggtttc-cgtcagttttattaaaaaacgttaagtgtggacacgtgtcacattttcattggctct 14724287  T

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Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 42193979 - 42194050
Alignment:
Q  134 cttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||| ||||| ||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  42193979 cttctgttaggtttct-gttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgacattggctct 42194050  T

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Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 43633220 - 43633309
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||||||||| |||| |||||| ||||||||||||  |||| |||||||||| |||||||||||| |||||||||    
T  43633220 agtctcgttttggtccattctgttaggtttc-cgttagttttaataaaaaaaacgttaagtgtggacacgtgtcaccttgttattggctct 43633309  T

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Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 30864257 - 30864342
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||| ||||| |||| | |||| |||||||||||||||| ||||| |||| ||||||| ||||||||||||    
T  30864257 agtctcgttttggtcccttcagttaggtttc-cattaggtttaataaaaaacgttaagtgtagacacgtgtcactttgtcattggct 30864342  T

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Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 2221691 - 2221778
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||||  |   | |||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  2221691 agtctcgttttggtcccttctgttaggtttcggggg-gttttaataaaaaacgttaagtgcggacacgtgtcaccttgtcattggctct 2221778  T

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Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 43086483 - 43086568
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaat--aaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||||||||||||| |||||||||| ||| ||||||| ||||||  |||||||||| | |||||||| |||||||||| |||||||    
T  43086483 agtctcgttttggtcccttctgttaggttt-tcgttagttttaataaaaaaaacgttaaatgtggacacgtgtcaccttatcattgg 43086568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 8272427 - 8272359
Alignment:
Q  125 ttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcacctt 194  Q
    ||||||||| |||| |||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||    
T  8272427 ttttggtctattctattaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcacctt 8272359  T

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Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 7775099 - 7775182
Alignment:
Q  121 ctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||||||||||| ||||| |||| |||| |||||| |||||||||||| |||| || ||||||| ||||||| ||||||||||||    
T  7775099 ctcgttttggtcccttctattaggtttc-cgttagttttaataaaaaaacgttaagggtggacacgtgtcacattgtcattggct 7775182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 3443166 - 3443213
Alignment:
Q  157 tttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  3443166 tttaataaaaaatgttaagtgtggacacgtgtcaccttgtcattggct 3443213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 8000731 - 8000678
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||| |||||||||||||||| ||||| || | ||||||||||||||||||||    
T  8000731 gttaggtttaataaaaaacgttaagtgttgaaacgtgtcaccttgtcattggct 8000678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 18475687 - 18475732
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgt 196  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||    
T  18475687 gttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgt 18475732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 32809991 - 32810057
Alignment:
Q  125 ttttggtctcttctgttagatttctcgttagatttaat-aaaaaacgtttagtgtggacatgtgtcac 191  Q
    |||||||| |||||||||| ||| ||||||| |||||| |||||||||| |||||||||| |||||||    
T  32809991 ttttggtcccttctgttaggttt-tcgttagttttaataaaaaaacgttaagtgtggacacgtgtcac 32810057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 7791749 - 7791834
Alignment:
Q  121 ctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||| ||||| |||| |||| |||||| |||| ||||||| |||| || ||||||| || ||||| |||||||||||||    
T  7791749 ctcgttttggtcccttctattaggtttc-cgttagttttattaaaaaaacgttaagggtggacacgtctcaccgtgtcattggctct 7791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 15271254 - 15271296
Alignment:
Q  164 aaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| || |||||||||| ||||||||||||||||||||||    
T  15271254 aaaaacattaagtgtggacacgtgtcaccttgtcattggctct 15271296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 2088153 - 2088094
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgt 178  Q
    |||||||||||||||  ||||||||  |||| |||||| |||||||||||||||| |||||    
T  2088153 agtctcgttttggtcctttctgttaagtttc-cgttaggtttaataaaaaacgttaagtgt 2088094  T

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Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 7265345 - 7265432
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  7265345 agtctcgttttggtcccttctgttagatttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 7265432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 11079591 - 11079504
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  11079591 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 11079504  T

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Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 17339891 - 17339978
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  17339891 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttcagtgtggacacgtgtcaccttgtcattggctct 17339978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 35001416 - 35001329
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  35001416 agtctcgttttggtctcttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttctcattggctct 35001329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 6157458 - 6157373
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  6157458 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 6157373  T

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Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 35774143 - 35774055
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  35774143 agtctcgttttggtcccttctgttagatttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 35774055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 1031262 - 1031175
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||||||||||||| |||| |||||| |||||| ||||||||| ||||||||||  |||||||||||||||||||||    
T  1031262 agtctcgttttggtctcttctgttaggtttc-cgttagttttaattaaaaacgttaagtgtggacacatgtcaccttgtcattggctct 1031175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 26888896 - 26888809
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| ||||||||  ||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  26888896 agtctcattttggtccattctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 26888809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 9050399 - 9050307
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| || || |||| |||||||||||||||||||||| ||||    
T  9050399 agtctcgttttggtcccttctgttaggtttc-cgttaggtttaataaaaaatgttaagcgttgacacgtgtcaccttgtcattggctctgagaa 9050307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 25586744 - 25586668
Alignment:
Q  134 cttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||| |||| |||||| |||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  25586744 cttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtggacacatgtcaccttgtcattggctctaagaa 25586668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 29961906 - 29961990
Alignment:
Q  117 aagtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    |||||||||||||||| |||| ||||| |||| |||||| |||||||||||||||| ||||||||||  |||||||||||||||||    
T  29961906 aagtctcgttttggtcccttcggttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacatgtcaccttgtcattgg 29961990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 27851004 - 27850913
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    |||||||| |||||| |||||||||| ||| ||||||| |||||||||||| |||| |||||||||| |||||||||||||||||| |||||||    
T  27851004 agtctcgtgttggtc-cttctgttaggttt-tcgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattgggtctaaga 27850913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 21591963 - 21592050
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||  |||||||||| | || |||||| |||||||| ||||||| |||||||||| ||||||||| ||||||||||||    
T  21591963 agtctcgttttggtgccttctgttaggtctc-cgttagttttaataataaacgttaagtgtggacacgtgtcacctcgtcattggctct 21592050  T

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Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 21596080 - 21596167
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||  |||||||||| | || |||||| |||||||| ||||||| |||||||||| ||||||||| ||||||||||||    
T  21596080 agtctcgttttggtgccttctgttaggtctc-cgttagttttaataataaacgttaagtgtggacacgtgtcacctcgtcattggctct 21596167  T

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Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 27098952 - 27098873
Alignment:
Q  126 tttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||| ||||||||||||||| |||||| |||||||||||| ||| |||| ||| ||||||||||||||||||| ||||    
T  27098952 tttggtcccttctgttagatttc-cgttagttttaataaaaaaagttaagtgcggatatgtgtcaccttgtcattgactct 27098873  T

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Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 16669988 - 16669899
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| ||||||||| |||||||||| |||| |||||| ||||||||||||  |||| | |||||||| ||||||||||||||||||||||    
T  16669988 agtcttgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaaacgttaaatgtggacacgtgtcaccttgtcattggctct 16669899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 30112671 - 30112582
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||| || |||||||||| |||| |||||| ||||||||||||  |||| ||||||||||  |||||||||||||||||||||    
T  30112671 agtctcgttttgatcccttctgttaggtttc-cgttagttttaataaaaaaaacgttaagtgtggacacatgtcaccttgtcattggctct 30112582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 27122101 - 27122009
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||| |||  ||||||||| |||| |||||  |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||    
T  27122101 agtctcgttttagtccattctgttaggtttc-cgttaagtttaataaaaaacgttaagtgtggacacgtgtcaccttgacattgactctgagaa 27122009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 4077374 - 4077295
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcatt 200  Q
    |||| ||||| || |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||| |||||||    
T  4077374 tctcattttgatcccttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtggacacgtgtcaccatgtcatt 4077295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 39023550 - 39023633
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    |||||| |||| ||| |||||||||| ||||  ||||| |||||||||||| ||| |||||||||||||||||||||| ||||||    
T  39023550 agtctcattttagtcccttctgttaggtttca-gttaggtttaataaaaaatgttaagtgtggacatgtgtcaccttgccattgg 39023633  T

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Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 3721703 - 3721754
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  3721703 gttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattgg 3721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 14349055 - 14349104
Alignment:
Q  152 ttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattg 201  Q
    |||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  14349055 ttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattg 14349104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 4821727 - 4821783
Alignment:
Q  151 gttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  4821727 gttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 4821783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 4960064 - 4959977
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| || |||  ||   |||||| ||| |||||||||| ||||||||||||||||||||||    
T  4960064 agtctcgttttggtcccttctgttaggtttc-cgatagggttttaaaaaaaagttaagtgtggacacgtgtcaccttgtcattggctct 4959977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 5595765 - 5595705
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||| |||||||||||| ||||    
T  5595765 gttaggtttaataaaaaaagttaagtgtggacacgtgtcacctcgtcattggctctgagaa 5595705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 1095592 - 1095654
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtgga 181  Q
    ||||||||||| ||| |||||||||| |||| |||||| |||||||||||||||| ||||||||    
T  1095592 agtctcgttttagtcccttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtgga 1095654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 24100327 - 24100373
Alignment:
Q  160 aataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||    
T  24100327 aataaaaaacgttaagtgtggacacgtgtcaccttatcattggctct 24100373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 39010277 - 39010323
Alignment:
Q  157 tttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggc 203  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||    
T  39010277 tttaaaaaaaaacgttaagtgtggacacgtgtcaccttgtcattggc 39010323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 35810239 - 35810300
Alignment:
Q  151 gttagatttaataaaaaac-gtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||| ||||||||||||  ||| |||||||||| |||||||||||||||||||||| ||||    
T  35810239 gttaggtttaataaaaaaatgttaagtgtggacacgtgtcaccttgtcattggctctgagaa 35810300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 13668146 - 13668206
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||| |||||||||||||||| || ||| ||| |||||||||||||||| ||||| ||||    
T  13668146 gttaggtttaataaaaaacgttaagcgtgaacacgtgtcaccttgtcattagctctgagaa 13668206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 5187047 - 5187004
Alignment:
Q  163 aaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||    
T  5187047 aaaaaacgttaagtgtggacacgtgtcaccttgtcattgactct 5187004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 14233054 - 14232993
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggac 182  Q
    |||||||||| || ||||||||||||||| |||||| ||||||| |||||| | |||||||||    
T  14233054 tctcgttttgatcccttctgttagatttc-cgttaggtttaatataaaacgctaagtgtggac 14232993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 24099836 - 24099891
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgttta 174  Q
    ||||||||||||||| ||||||||||  ||| |||||| |||||||||||| |||||    
T  24099836 agtctcgttttggtcccttctgttaggattc-cgttagttttaataaaaaaggttta 24099891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 1098150 - 1098237
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1098150 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacatgtgtcaccttgtcattggctct 1098237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 17475494 - 17475584
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaag 209  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  17475494 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctctaag 17475584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 42369224 - 42369311
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  42369224 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 42369311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 40256194 - 40256286
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||    
T  40256194 agtctcgttttggtcccttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttatcattggctctgagaa 40256286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 17258962 - 17259049
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||  |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  17258962 agtctcgttttggtcccttctgttacgtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 17259049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 25618537 - 25618619
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25618537 tcgttttggtc-cttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacatgtgtcaccttgtcattggctct 25618619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 46307652 - 46307739
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  46307652 agtctcgttttggtcctttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 46307739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 11649601 - 11649687
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctc 205  Q
    |||||| ||||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  11649601 agtctcattttggtctcttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttctcattggctc 11649687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 46849542 - 46849460
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattg 201  Q
    |||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| |||||||||| |||||||||||||||||    
T  46849542 agtctcgttttggtctcttctgttaggtttc-cgttgaatttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattg 46849460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 46059083 - 46058998
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||| |||||||||| ||| | ||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  46059083 tctcgttttggtcccttctgttaggttttt-gttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 46058998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 46580130 - 46580045
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||| |||||||||    
T  46580130 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttatcattggct 46580045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 39321158 - 39321246
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  39321158 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 39321246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 14947282 - 14947369
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||||| |||| ||||||||||||||||||||||    
T  14947282 agtctcgttttggtcccttctgttaggtttc-cgttaggtttaataaaaaatgttaagtgtagacacgtgtcaccttgtcattggctct 14947369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 31488075 - 31488162
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  31488075 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgttaccttatcattggctct 31488162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 44303612 - 44303699
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||  |||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  44303612 agtctcgttttggtcccttctgttaggtttc-cgttatttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattgactct 44303699  T

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Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 48453963 - 48453880
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||| ||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  48453963 tcgtttttgtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 48453880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 3503930 - 3503844
Alignment:
Q  119 gtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||||| |  || ||||||||||||||||||    
T  3503930 gtctcgttttggtcccttctgttagattt-tcgttagttttaataaaaaacgttaagtgtggatacatggcaccttgtcattggctct 3503844  T

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Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 24045808 - 24045718
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaag 209  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||||||||| || | |||||||| |||||||||||||||| ||||||||    
T  24045808 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacattaaatgtggacacgtgtcaccttgtcattagctctaag 24045718  T

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Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 20614576 - 20614491
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||  |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||| |||||||||||||||    
T  20614576 agtctcgttttggtgccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgttaccttgtcattggct 20614491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 22680064 - 22679972
Alignment:
Q  119 gtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||||||| |||||||||| ||| ||||||  |||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||    
T  22680064 gtctcgttttggtcccttctgttaggttt-tcgttaagtttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctctgagaa 22679972  T

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Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 28504675 - 28504762
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  28504675 agtctcgttttggtc-cttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 28504762  T

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Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 56271174 - 56271086
Alignment:
Q  121 ctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    |||||||||||| |||||||||| |||| |||| | |||||||||||||||| ||| |||||| |||||||||||||||||| |||||||    
T  56271174 ctcgttttggtcccttctgttaggtttc-cgttggttttaataaaaaacgttaagtatggacacgtgtcaccttgtcattggttctaaga 56271086  T

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Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 5904602 - 5904688
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||  |||| ||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5904602 agtctcgttttggtaccttcggttag-tttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 5904688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 14525898 - 14525811
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||| |||||| | |||||||||    
T  14525898 agtctcgttttggtcccttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtggacacgtgccaccttattattggctct 14525811  T

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Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 41610224 - 41610307
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||||||||||||| |||||||||  |||| |||||| |||||||||||||||| |||||||| | ||||||||||||||||||    
T  41610224 agtctcgttttggtcccttctgttaagtttc-cgttagttttaataaaaaacgttaagtgtggatacgtgtcaccttgtcattgg 41610307  T

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Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 42018848 - 42018761
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| ||||||||||  |||||| || |||||||||||    
T  42018848 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacatgtcactttatcattggctct 42018761  T

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Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 9181490 - 9181566
Alignment:
Q  134 cttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||| |||| |||||| ||||||||||||| || |||||||||| |||||||||||||||||||||| ||||    
T  9181490 cttctgttaggtttc-cgttaggtttaataaaaaactttaagtgtggacacgtgtcaccttgtcattggctctgagaa 9181566  T

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Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 22309427 - 22309337
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa---cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||||| ||||| ||||||||||||   |||| |||||||||| |||||| |||||||||||||||    
T  22309427 agtctcgttttggtcccttctgttaggtttct-gttagttttaataaaaaaaaacgttgagtgtggacacgtgtcatcttgtcattggctct 22309337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 31262185 - 31262097
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaac-gtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||| ||||| |||| |||||| ||||||||||||  ||| |||||||||| ||||||||||||||||||||||    
T  31262185 agtctcgttttggtcccttcggttaggtttc-cgttagttttaataaaaaaatgttaagtgtggacacgtgtcaccttgtcattggctct 31262097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 37208411 - 37208495
Alignment:
Q  117 aagtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    |||||||||||||||| |||||||||| |||| |||||  |||||||||||||||| ||||||||||  ||||||||||| |||||    
T  37208411 aagtctcgttttggtcccttctgttaggtttc-cgttaattttaataaaaaacgttaagtgtggacacttgtcaccttgttattgg 37208495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 39829637 - 39829545
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||||| || |||||||||  |||| |||||| |||||||||||||||| ||||  |||| |||||||||||||||||||||| ||||    
T  39829637 agtctcgttttgatcccttctgttaagtttc-cgttaggtttaataaaaaacgttaagtgcagacacgtgtcaccttgtcattggctctgagaa 39829545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 52574773 - 52574858
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||| |||||| |||| |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  52574773 agtctcgttttggtc-cttgtgttaggtttc-cgttagttttaataaaaaa-gttaagtgtggacacgtgtcaccttgtcattggctct 52574858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 53652960 - 53652901
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    ||||| |||||||||||||||| || ||||||| ||||||||||||||||||| ||||||    
T  53652960 gttaggtttaataaaaaacgttaagcgtggacacgtgtcaccttgtcattggcactaaga 53652901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 54037548 - 54037640
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||||| || |||| ||||| ||| ||||||| |||||||||||| ||| ||||||||||  ||||||||| |||||| |||| ||||    
T  54037548 agtctcgttttgatcccttccgttaggttt-tcgttaggtttaataaaaaatgttaagtgtggacacatgtcaccttatcattgactctgagaa 54037640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 41845619 - 41845674
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| |||||||||||| ||| | | |||||||||||||||||||||||||||||    
T  41845619 gttagttttaataaaaaatgttaaatatggacatgtgtcaccttgtcattggctct 41845674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 48091936 - 48091845
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||||||||  ||||||||| |||| |||||| ||||||||| | |||| | ||||||||  ||||||||| ||||||||||| ||||    
T  48091936 agtctcgttttggtccattctgttaggtttc-cgttagttttaataaata-cgttaaatgtggacacatgtcaccttttcattggctctgagaa 48091845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 51624438 - 51624386
Alignment:
Q  152 ttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||| |||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  51624438 ttaggtttaataaaaaatgttaaatgtggacacgtgtcaccttgtcattggct 51624386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 34237909 - 34237860
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa 168  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||||||||    
T  34237909 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaa 34237860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 2814598 - 2814685
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  2814598 agtctcgttttggtcccttctgttagatttc-cgttaggtttaataaaaaatgttaagtgtggacatgtgtcaccttgtcattggctct 2814685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 6098726 - 6098818
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  6098726 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctctgagaa 6098818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 11218806 - 11218714
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  11218806 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctctgagaa 11218714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 31048659 - 31048746
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||  |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  31048659 agtctcgttttggtcccttctgttaggtttc-cgttaattttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 31048746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 51676098 - 51676011
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||| || |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  51676098 agtctcgttttgatcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 51676011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 53246193 - 53246280
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||| |||||| |||||  |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  53246193 agtctcgttttggtcccttctgttcgatttc-cgttaattttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 53246280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 32309230 - 32309316
Alignment:
Q  119 gtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  32309230 gtctcgttttggtcccttctgttaggtttc-cgttagttttaatataaaacgttaagtgtggacacgtgtcaccttgtcattggctct 32309316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 13355688 - 13355600
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| |||||||||||||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  13355688 agtcttgttttggtctcttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 13355600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 39198514 - 39198597
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||||||||| || |||||||||| ||||||||||||||||||    
T  39198514 agtctcgttttggtcacttctgttaggtttc-cgttagttttaataaaaaacattaagtgtggacacgtgtcaccttgtcattgg 39198597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 45940641 - 45940554
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||||| ||||| ||||||||||||  || |||||||||| ||||||||||||||||||||||    
T  45940641 agtctcgttttggtcccttctgttaggtttct-gttagttttaataaaaaatattaagtgtggacacgtgtcaccttgtcattggctct 45940554  T

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Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 48946273 - 48946359
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||| | |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  48946273 agtctcgttttggtcccttctgttaggtttc-cgtt-gttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 48946359  T

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Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 12740308 - 12740228
Alignment:
Q  124 gttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  12740308 gttttggtc-cttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 12740228  T

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Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 29191762 - 29191670
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctctaag 209  Q
    ||||||||||||||| |||| ||||| |||| |||||| ||||| ||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  29191762 agtctcgttttggtcccttcggttaggtttc-cgttagttttaaaaaaaaaaacgttaagtgtggacatgtgtcaccttgtcattggctctaag 29191670  T

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Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 24242958 - 24242875
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattg 201  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| |||||||||||||||||    
T  24242958 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattg 24242875  T

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Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 40503336 - 40503423
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||| | |||||||||||||||| |||||| ||| |||||||||||||||| |||||    
T  40503336 agtctcgttttggtcccttctgttaggtttc-cgtttgttttaataaaaaacgttaagtgtgaacacgtgtcaccttgtcattcgctct 40503423  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 44711657 - 44711740
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||||||||||||| |||||||||| ||| ||||||  ||||||||||| |||| |||||||||| ||||||||||||||||||    
T  44711657 agtctcgttttggtcccttctgttaggttt-tcgttacttttaataaaaatcgttaagtgtggacacgtgtcaccttgtcattgg 44711740  T

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Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 36174609 - 36174695
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  36174609 tctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtttggacacgtgtcaccttgtcattggctct 36174695  T

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Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 15986718 - 15986809
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| |||||||||| |||||||||||| |||| |||| ||||    
T  15986718 agtctcgttttggtc-cttctgttaggtttc-cgttaggtttaataaaaaatgttaagtgtggacacgtgtcaccttgtaattgtctctgagaa 15986809  T

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Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 41263123 - 41263211
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |  ||||||| ||||||||||||||||||||||    
T  41263123 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaaaggtggacacgtgtcaccttgtcattggctct 41263211  T

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Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 47872613 - 47872701
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaa-acgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||||||| || || |||||||||| ||||||||||||||||| ||||    
T  47872613 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaatacattaagtgtggacacgtgtcaccttgtcattgactct 47872701  T

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Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 876065 - 876152
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||   ||||||||| |||| |||||| |||||||||||||||| | |||||||| ||||||||| ||||||||||||    
T  876065 agtctcgttttggttatttctgttaggtttc-cgttagttttaataaaaaacgttaaatgtggacacgtgtcacctcgtcattggctct 876152  T

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Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 45533699 - 45533774
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcacctt 194  Q
    ||||||||||||||| |||||||||  ||||| |||||||||||||||||||||| ||||||||||  |||||||||    
T  45533699 agtctcgttttggtcccttctgttaagtttct-gttagatttaataaaaaacgttaagtgtggacacatgtcacctt 45533774  T

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Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 36876951 - 36877036
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctc 205  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| ||||| |||| |||||||||||||| ||||||    
T  36876951 agtctcgttttggtc-cttctgttaggtttc-cgttagttttaataaaaaaagttaagtgtagacacgtgtcaccttgtcaatggctc 36877036  T

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Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 967438 - 967353
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||| |||  ||||||||  |||| |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  967438 tctcgttttagtcctttctgttaagtttc-cgttagttttaataaaaaatgttaagtgtggacacgtgtcaccttgtcattggctct 967353  T

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Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 27989898 - 27989986
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctc 205  Q
    ||||||||||||||| |||||||||| |||| |||| | ||||||||||||  |||| |||||||||| ||||||||||||| |||||||    
T  27989898 agtctcgttttggtcccttctgttaggtttc-cgtttgttttaataaaaaaaacgttaagtgtggacacgtgtcaccttgtcgttggctc 27989986  T

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Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 29587438 - 29587492
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctc 205  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  29587438 gttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctc 29587492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 744417 - 744364
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  744417 gttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 744364  T

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Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 755818 - 755730
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||| || ||| |||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||| ||||    
T  755818 agtctcgttttgatcccttttgttaggtttc-cgttaggtttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattgactct 755730  T

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Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 44475406 - 44475497
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaac-gtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||||||  ||||||||||||| | ||||| ||||||||||||  ||| |||||||||| ||| |||||||||||||||||| ||||    
T  44475406 tctcgttttggtccattctgttagattttt-gttaggtttaataaaaaaatgttaagtgtggacacgtgacaccttgtcattggctctgagaa 44475497  T

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Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 5408353 - 5408293
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggaca 183  Q
    ||||||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||||||    
T  5408353 tcgttttggtcccttctgttaggtttc-cgttatatttaataaaaaacgttaagtgtggaca 5408293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 38731578 - 38731654
Alignment:
Q  134 cttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||| |||| |||||  |||||||||||||||| ||||||| || |||||||| ||||||||||||| ||||    
T  38731578 cttctgttaggtttc-cgttaagtttaataaaaaacgttaagtgtgggcacgtgtcaccctgtcattggctctgagaa 38731654  T

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Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 28919534 - 28919451
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||||||||| || |||||||| | |||| |||||| || ||||||||||||  ||||||||||  | |||||||||||||||||    
T  28919534 tctcgttttgatcccttctgttcggtttc-cgttaggttaaataaaaaacgtcaagtgtggacacatatcaccttgtcattggct 28919451  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 9242211 - 9242253
Alignment:
Q  164 aaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| || |||||||||| ||||||||||||||||||||||    
T  9242211 aaaaacattaagtgtggacacgtgtcaccttgtcattggctct 9242253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 8e-27; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 2970432 - 2970520
Alignment:
Q  117 aagtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  2970432 aagtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 2970520  T

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Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 38807147 - 38807055
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  38807147 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctctgagaa 38807055  T

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Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 5381632 - 5381719
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5381632 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 5381719  T

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Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 25478919 - 25479006
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  25478919 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 25479006  T

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Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 31557187 - 31557274
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  31557187 agtctcgttttggtcccttctgttaggtttct-gttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 31557274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 18470030 - 18469945
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  18470030 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 18469945  T

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Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 25334254 - 25334343
Alignment:
Q  117 aagtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctcta 207  Q
    |||||||||||||||||||| |||||| |||| |||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  25334254 aagtctcgttttggtctcttttgttaggtttc-cgttagttttaataaaaatcgttaagtgtggacacgtgtcaccttgtcattggctcta 25334343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 13479393 - 13479306
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  13479393 agtctcgttttggtcccttctgttaggtttct-gttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgttattggctct 13479306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 14288281 - 14288194
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||||||||||||| ||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  14288281 agtctcgttttggtccattctgttagattt-tcgttaggtttaataaaaaacgttatgtgtggacacgtgtcaccttgtcattggctct 14288194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 26424787 - 26424700
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  26424787 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattagctct 26424700  T

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Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 33200486 - 33200399
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  33200486 agtctcgttttggtccattctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 33200399  T

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Target: chr2; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 34618483 - 34618396
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  34618483 agtctcgttttggtcccttctgttaggtttc-cgttagttttagtaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 34618396  T

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Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 43819918 - 43820005
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  43819918 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtagacacgtgtcaccttgtcattggctct 43820005  T

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Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 18064390 - 18064305
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||| |||||||||    
T  18064390 agtctcgttttggtcccttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttatcattggct 18064305  T

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Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 677881 - 677793
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  677881 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 677793  T

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Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 16712806 - 16712714
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||| ||  |||||| |||| |||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  16712806 agtctcgttttggtccctcatgttaggtttc-cgttaggtttaataaaaaactttaagtgtggacacgtgtcaccttgtcattggctctaagaa 16712714  T

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Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 20558855 - 20558763
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||| ||||||||||||||||||| |||| |||||| |||||||||||||||| |||||| |||  ||||||||||||||||||||| ||||    
T  20558855 agtctcattttggtctcttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtgaacacatgtcaccttgtcattggctctgagaa 20558763  T

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Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 4979810 - 4979897
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| |||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  4979810 agtctccttttggtcccttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcataggctct 4979897  T

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Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 4997721 - 4997808
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| |||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  4997721 agtctccttttggtcccttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcataggctct 4997808  T

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Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 17978059 - 17977972
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||||| ||||| ||||||||||||| || || ||||||| ||||||||||||||||||||||    
T  17978059 agtctcgttttggtcccttctgttaggtttct-gttagttttaataaaaaacattaagggtggacacgtgtcaccttgtcattggctct 17977972  T

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Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 32194539 - 32194622
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||| ||||||    
T  32194539 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgccattgg 32194622  T

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Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 2822642 - 2822554
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||| ||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  2822642 agtctcgttttggtcccttcggttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 2822554  T

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Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 14848160 - 14848077
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||| | || ||| |||||| ||||||||||||||||||||||    
T  14848160 tcgttttggtcccttctgttagatttc-cgttaggtttaataaaaagcattaagtatggacacgtgtcaccttgtcattggctct 14848077  T

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Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 15136447 - 15136534
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||||||||| |||| |||||| |||||||||| ||||| |||||||||| ||||||| ||||||||||||||    
T  15136447 agtctcgttttggtcctttctgttaggtttc-cgttagttttaataaaagacgttaagtgtggacacgtgtcactttgtcattggctct 15136534  T

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Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 21532619 - 21532706
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||||||||| |||| |||||| |||||||||||||||| ||||||||||  |||||| ||||||||||||||    
T  21532619 agtctcgttttggtcctttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacatgtcacattgtcattggctct 21532706  T

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Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 25882481 - 25882394
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||| ||  |||||||||| |||| |||||| |||||||||||||||| ||| |||||| ||||||| ||||||||||||||    
T  25882481 agtctcgttttagttccttctgttaggtttc-cgttagttttaataaaaaacgttaagtatggacacgtgtcactttgtcattggctct 25882394  T

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Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 38536581 - 38536499
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattg 201  Q
    ||||||||||||||| |||||||||| ||| ||||||| |||||||||||||||| ||||| |||| ||||||| || ||||||    
T  38536581 agtctcgttttggtcccttctgttaggttt-tcgttagttttaataaaaaacgttaagtgttgacacgtgtcactttatcattg 38536499  T

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Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 39107352 - 39107405
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  39107352 gttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggct 39107405  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 39109465 - 39109377
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| | ||| ||||  |||||||||||| |||| |||||||||| |||||||||||||| |||||||    
T  39109465 agtctcgttttggtcccttctgttaggtatct-gttaagtttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcactggctct 39109377  T

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Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 7674601 - 7674520
Alignment:
Q  124 gttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| || |||||||||| |||| | |||  |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  7674601 gttttgatcccttctgttaggtttc-cattacgtttaataaaaaatgttaagtgtggacacgtgtcaccttgtcattggctct 7674520  T

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Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 4602572 - 4602658
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||| | |||||| |||||| |||||||||||||||| ||||| ||||  |||||  ||||||||||||||    
T  4602572 agtctcgttttggtc-cttctgcttgatttc-cgttagttttaataaaaaacgttaagtgttgacacatgtcattttgtcattggctct 4602658  T

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Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 12466173 - 12466236
Alignment:
Q  140 ttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||| |||||| ||||||||||||| || |||||||||| ||||||| ||||||||||||    
T  12466173 ttagatttc-cgttaggtttaataaaaaactttaagtgtggacacgtgtcacattgtcattggct 12466236  T

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Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 36313308 - 36313395
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||| ||||| ||| || |||| ||||||||||||| || |||||||||| ||||||| || |||||||||||    
T  36313308 agtctcgttttggtcctttcggttaggttt-tcattagttttaataaaaaacattaagtgtggacacgtgtcactttatcattggctct 36313395  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 11713408 - 11713488
Alignment:
Q  125 ttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||||||| |||||||||| |||| |||||| ||||||||||||  |||| ||| ||| || ||||||||||||||||||||    
T  11713408 ttttggtcccttctgttaggtttc-cgttagttttaataaaaaaaacgttaagtatgggcacgtgtcaccttgtcattggct 11713488  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 5381979 - 5381890
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagt-gtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||||||||||||| |||| ||||||  ||   |||||| ||| | |  |||||| ||||||||||||||||||||||    
T  5381979 agtctcgttttggtctcttctgttaggtttcccgttagggttttaaaaaaaggttaactcctggacacgtgtcaccttgtcattggctct 5381890  T

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Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 12966170 - 12966114
Alignment:
Q  151 gttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| |||||||||||| |||| |||||||||| ||||||||||||||||| ||||    
T  12966170 gttaggtttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattgactct 12966114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 4844145 - 4844195
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaac 169  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||    
T  4844145 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaac 4844195  T

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Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 20237299 - 20237334
Alignment:
Q  171 tttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||| ||||||||||||||||||||||    
T  20237299 tttagtgtggacacgtgtcaccttgtcattggctct 20237334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 35668544 - 35668600
Alignment:
Q  151 gttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| |||||||||||| |||| |||||||| | ||||||||||||||||| ||||    
T  35668544 gttaggtttaataaaaaaacgttaagtgtggatacgtgtcaccttgtcattgactct 35668600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 57520 - 57433
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  57520 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 57433  T

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Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 23140213 - 23140126
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  23140213 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 23140126  T

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Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 31852044 - 31851957
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  31852044 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 31851957  T

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Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 18458374 - 18458461
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| |||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  18458374 agtctcattttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 18458461  T

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Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 22569680 - 22569767
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  22569680 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtgaacacgtgtcaccttgtcattggctct 22569767  T

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Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 27284338 - 27284425
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  27284338 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaatgttaagtgtggacacgtgtcaccttgtcattggctct 27284425  T

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Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 29414203 - 29414290
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  29414203 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgttattggctct 29414290  T

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Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 36951537 - 36951450
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  36951537 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaatgttaagtgtggacacgtgtcaccttgtcattggctct 36951450  T

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Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 37374064 - 37374151
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  37374064 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttatcattggctct 37374151  T

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Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 39143473 - 39143386
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  39143473 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattgactct 39143386  T

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Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 48095324 - 48095237
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  48095324 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaagttaagtgtggacacgtgtcaccttgtcattggctct 48095237  T

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Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 36720953 - 36720868
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    ||||||||||||||| |||||||||| |||| ||| || |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  36720953 agtctcgttttggtcccttctgttaggtttc-cgtcaggtttaataaaaaatgttaagtgtggacatgtgtcaccttgtcattggct 36720868  T

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Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 23911040 - 23910952
Alignment:
Q  121 ctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    |||||||||||| |||||||||| ||| ||||||| |||||||||||||||| |||||||||| ||||||| |||||||||| |||||||    
T  23911040 ctcgttttggtcccttctgttaggttt-tcgttagttttaataaaaaacgttaagtgtggacacgtgtcacattgtcattggttctaaga 23910952  T

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Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 41692362 - 41692274
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| ||||| ||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  41692362 agtctcgttttggtcccttctgttaggtttct-gttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 41692274  T

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Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 43705353 - 43705265
Alignment:
Q  117 aagtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||| ||| |||||| |||| |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  43705353 aagtctcgttttggtcccttatgttaggtttc-cgttagttttaataaaaaatgttaagtgtggacacgtgtcaccttgtcattggctct 43705265  T

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Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 5905493 - 5905406
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| |||||||  |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5905493 agtctcattttggttccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 5905406  T

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Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 5905665 - 5905578
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| |||||||  |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5905665 agtctcattttggttccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 5905578  T

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Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 7776554 - 7776641
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||  || ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  7776554 agtctcgttttggtcccttctgttagttttc-cgttaatttaaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 7776641  T

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Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 20493842 - 20493929
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||| |||||| ||||||||||    
T  20493842 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgttaccttgacattggctct 20493929  T

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Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 24733729 - 24733812
Alignment:
Q  122 tcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  24733729 tcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggatacgtgtcaccttgtcattggctct 24733812  T

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Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 32072394 - 32072477
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||| ||| |||||| ||| ||||||||||||||||||    
T  32072394 agtctcgttttggtctcttctgttaggtttc-cgttaggtttaataaaaaatgttaagtgtgaacacgtgtcaccttgtcattgg 32072477  T

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Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 40852121 - 40852034
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  |||||||||||||| |||||| |||||| ||||||||| ||||||||||  |||||||||||||||||||||    
T  40852121 agtctcgttttggtccattctgttagatttc-cgttagttttaattaaaaacgttaagtgtggacacatgtcaccttgtcattggctct 40852034  T

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Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 45456831 - 45456918
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||  |||||||||| |||| |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  45456831 agtctcgttttggttccttctgttaggtttc-cgttagttttaataaaaaatgttaagtgtggacacgtgtcaccttgtcattggctct 45456918  T

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Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 45995745 - 45995654
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    ||||||||||||||| |||||||||| |||| | |||  |||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  45995745 agtctcgttttggtcccttctgttaggtttc-cattatttttaataaaaaacgttaagtgtagacacgtgtcaccttgtcattggctctaaga 45995654  T

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Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 35918700 - 35918615
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggct 204  Q
    |||||||||||||||  ||||||||| ||| ||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||    
T  35918700 agtctcgttttggtccattctgttaggttt-tcgttagttttaataaaaaacgtcaagtgtggacacgtgtcaccttgtcattggct 35918615  T

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Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 47987751 - 47987661
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||||||| |||  ||||| |||| |||||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||    
T  47987751 agtctcgttttggtccctt--gttagctttc-cgttagatttaataaaaaactttaagtgtggacacgtgtcaccttgtcattggctctgagaa 47987661  T

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Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 3217327 - 3217415
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||| |||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  3217327 agtctcgttttggtcccttctattaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 3217415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 23440557 - 23440645
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| |||||||||| |||||||||||    
T  23440557 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttctcattggctct 23440645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 713023 - 712936
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||| |||||| |||||||||| ||||  ||||| |||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  713023 agtctcgtattggtcccttctgttaggtttca-gttagttttaataaaaaacgttaaatgtggacacgtgtcaccttgtcattggctct 712936  T

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Target: chr7; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 5869846 - 5869931
Alignment:
Q  120 tctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||| ||||| |||||||||| || |||| |||||| |||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  5869846 tctcattttgatctcttctgtcaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgttaccttgtcattggctct 5869931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 14708316 - 14708398
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgttta-gtgtggacatgtgtcaccttgtcatt 200  Q
    ||||||||||||||| ||| |||||| |||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||    
T  14708316 agtctcgttttggtcccttttgttaggtttc-cgttagttttaataaaaaacttttaagtgtggacacgtgtcaccttgtcatt 14708398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 17489614 - 17489696
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcatt 200  Q
    ||||||||||||||| |||||||||| |||| ||| || |||||||||||| |||| |||||||||| ||||||||||||||||    
T  17489614 agtctcgttttggtcccttctgttaggtttc-cgtcagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcatt 17489696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 17563600 - 17563518
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcatt 200  Q
    ||||||||||||||| |||||||||| |||| ||| || |||||||||||| |||| |||||||||| ||||||||||||||||    
T  17563600 agtctcgttttggtcccttctgttaggtttc-cgtcagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcatt 17563518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 34621746 - 34621659
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||||| || |||| |||||  |||||||||||| ||| ||| ||||||||| ||||||||||||| |||||    
T  34621746 agtctcgttttggtcccttctgtaaggtttc-cgttaagtttaataaaaaatgttaagtatggacatgtatcaccttgtcattagctct 34621659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 15573263 - 15573318
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| |||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  15573263 gttagttttaataaaaaacgttaagtgtggacacgtgtcaccatgtcattggctct 15573318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 41911371 - 41911464
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgttta-gtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    |||||||||||||||  ||||||||| ||| ||||||| ||||||||||||  |||| ||||| ||| ||||||| |||||||||||||| ||||    
T  41911371 agtctcgttttggtccattctgttaggttt-tcgttaggtttaataaaaaaactttaagtgtgaacacgtgtcacattgtcattggctctgagaa 41911464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 28460682 - 28460731
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcatt 200  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  28460682 gttaggtttaataaaaaacgttaagtgtggacacgtgtcaccttgtcatt 28460731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 42287772 - 42287688
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaac-gtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    |||||||||||| || |||||||||| |||| |||||| ||||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  42287772 agtctcgttttgctcccttctgttaggtttc-cgttagttttaataaaaagccgttaagtgtggacacgtgtcaccttgccattgg 42287688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 21432990 - 21432930
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||| |||||||||||| ||| ||||| |||| ||||||||||| |||||||||||||||    
T  21432990 gttaggtttaataaaaaatgttaagtgtagacacgtgtcaccttgccattggctctaagaa 21432930  T

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Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 751707 - 751747
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcac 191  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  751707 gttagatttaataaaaaacgttaagtgtggacacgtgtcac 751747  T

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Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 29771138 - 29771193
Alignment:
Q  151 gttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| |||||||||||| ||| ||||||||||  ||||||||||||||| |||||    
T  29771138 gttaggtttaataaaaaatgttaagtgtggacacatgtcaccttgtcattagctct 29771193  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 38444799 - 38444739
Alignment:
Q  151 gttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||| |||||||||||| |||| ||||||| || |||||||||||||||||||||| ||||    
T  38444799 gttaggtttaataaaaaaacgttaagtgtgg-cacgtgtcaccttgtcattggctctgagaa 38444739  T

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Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 715011 - 714924
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  715011 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 714924  T

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Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 3366959 - 3366872
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3366959 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 3366872  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 10915125 - 10915038
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  10915125 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 10915038  T

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Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 3618878 - 3618965
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||| |||||||    
T  3618878 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcaatggctct 3618965  T

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Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 9424869 - 9424782
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| | |||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  9424869 agtctcgttttggtcccttctgttaggtttc-cattagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 9424782  T

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Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 21271583 - 21271670
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||  |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  21271583 agtctcgttttggtcccttctgttatgtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 21271670  T

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Target: chr6; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 29175485 - 29175398
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||||||||||||| |||||  ||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  29175485 agtctcgttttggtcccttctgttagatttc-cgttaattttaacaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 29175398  T

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Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 31739877 - 31739790
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  31739877 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattagctct 31739790  T

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Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 26392806 - 26392718
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  26392806 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 26392718  T

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Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 13703815 - 13703724
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaaga 210  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| ||||||||||  | |||| ||||||||||||||||||    
T  13703815 agtctcgttttggtcccttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgtggacacatatcacgttgtcattggctctaaga 13703724  T

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Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 18683897 - 18683810
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||| |||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  18683897 agtctcattttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtctttggctct 18683810  T

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Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 13839830 - 13839743
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| || ||| |||||||||||||| | |||||||||| |||||||||||| |||||||||    
T  13839830 agtctcgttttggtcccttctgttaggtttc-cgatagttttaataaaaaacgctaagtgtggacacgtgtcaccttgtgattggctct 13839743  T

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Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 14527480 - 14527393
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||| |||| |||||  || ||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  14527480 agtctcgttttggtcccttctgttaggtttc-cgttaatttaaataaaaaacgttcagtgtggacacgtgtcactttgtcattggctct 14527393  T

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Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 22498477 - 22498557
Alignment:
Q  125 ttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||| ||| |||||||||| |||| |||||| |||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  22498477 ttttagtcccttctgttaggtttc-cgttagttttaataaaaaacgttaaatgtggacacgtgtcaccttgtcattggctct 22498557  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 34751572 - 34751610
Alignment:
Q  168 acgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  34751572 acgttaagtgtggacacgtgtcaccttgtcattggctct 34751610  T

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Target: scaffold0006 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 83110 - 83193
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattgg 202  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  83110 agtctcgttttggtcccttctgttaggtttc-cgttagttttaataaaaaacgttaagtgtggacacgtgtcaccttgtcattgg 83193  T

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Target: scaffold0027 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 125399 - 125312
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| |||||||||  |||| |||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  125399 agtctcgttttggtcccttctgttaagtttc-cgttagttttaaaaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 125312  T

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Target: scaffold0027; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 40564 - 40478
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||||||  ||||||||| |||| |||||| |||||||||||||||| ||||| ||||  |||||||||||||||||||||    
T  40564 agtctcgttttggtcctttctgttaggtttc-cgttaggtttaataaaaaacgttaagtgt-gacacttgtcaccttgtcattggctct 40478  T

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Target: scaffold0018 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 133537 - 133450
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||| ||||| |||| |||| | |||| |||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  133537 agtctcgttttggtcccttctattaggtttc-cattaggtttaataaaaaacgttaagtgtagacacgtgtcaccttgtcattggctct 133450  T

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Target: scaffold0009 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 242123 - 242036
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||| ||| ||||| |||| ||||| ||||| || ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  242123 agtctcgttttcgtcccttctattaggtttct-gttagtttcaataaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 242036  T

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Target: scaffold0014 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 231219 - 231130
Alignment:
Q  118 agtctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa--cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    ||||||||||||||  |||||||||| |||| |||||| ||||||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  231219 agtctcgttttggtgccttctgttaggtttc-cgttagttttaataaaaaaaacgttaagtgtggacacgtgtcaccttgtcattggctct 231130  T

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Target: scaffold0482 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 164 - 79
Alignment:
Q  121 ctcgttttggtctcttctgttagatttctcgttagatttaataaaaaa-cgtttagtgtggacatgtgtcaccttgtcattggctct 206  Q
    |||||||||||| ||||| |||| |||| |||||| |||| ||||||| |||| || ||||||| || ||||| |||||||||||||    
T  164 ctcgttttggtcccttctattaggtttc-cgttagttttattaaaaaaacgttaagggtggacacgtctcaccgtgtcattggctct 79  T

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Target: scaffold0043 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 60178 - 60124
Alignment:
Q  157 tttaataaaaaacgtttagtgtggacatgtgtcaccttgtcattggctctaagaa 211  Q
    ||||||||||| |||| | |||||||| ||||||||||||||||| |||| ||||    
T  60178 tttaataaaaagcgttaaatgtggacacgtgtcaccttgtcattgactctgagaa 60124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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