View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19918_high_3 (Length: 498)

Name: NF19918_high_3
Description: NF19918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19918_high_3
NF19918_high_3
[»] chr5 (39 HSPs)
chr5 (199-457)||(6768435-6768691)
chr5 (11-139)||(21371066-21371194)
chr5 (11-161)||(28290014-28290164)
chr5 (11-184)||(15029679-15029852)
chr5 (13-134)||(28289737-28289858)
chr5 (11-183)||(38900648-38900818)
chr5 (11-139)||(18150093-18150222)
chr5 (11-184)||(19291359-19291533)
chr5 (11-184)||(4967139-4967314)
chr5 (11-184)||(32697593-32697769)
chr5 (11-184)||(4966819-4966991)
chr5 (11-161)||(8418991-8419140)
chr5 (11-184)||(22651348-22651521)
chr5 (11-161)||(15115465-15115612)
chr5 (19-146)||(38901020-38901145)
chr5 (53-146)||(18149774-18149867)
chr5 (11-161)||(39083384-39083536)
chr5 (19-184)||(14340785-14340953)
chr5 (13-184)||(21370689-21370870)
chr5 (27-175)||(32305830-32305977)
chr5 (11-128)||(5161641-5161759)
chr5 (49-134)||(5161976-5162062)
chr5 (27-184)||(10721789-10721945)
chr5 (27-184)||(16752955-16753113)
chr5 (11-130)||(16752639-16752757)
chr5 (13-88)||(14340479-14340554)
chr5 (27-184)||(41834445-41834602)
chr5 (27-184)||(27307064-27307220)
chr5 (45-145)||(28494886-28494985)
chr5 (73-184)||(20266346-20266458)
chr5 (27-146)||(27307444-27307565)
chr5 (107-184)||(14340401-14340478)
chr5 (11-56)||(22651715-22651760)
chr5 (11-64)||(32697458-32697511)
chr5 (27-95)||(28495227-28495294)
chr5 (73-146)||(13557033-13557106)
chr5 (79-124)||(14464954-14465000)
chr5 (73-130)||(17260383-17260441)
chr5 (88-132)||(21769597-21769641)
[»] chr7 (52 HSPs)
chr7 (11-184)||(7732491-7732664)
chr7 (11-161)||(9181558-9181708)
chr7 (11-161)||(25637568-25637718)
chr7 (13-137)||(16081671-16081795)
chr7 (11-134)||(28687869-28687992)
chr7 (11-134)||(9181779-9181905)
chr7 (10-184)||(2758067-2758241)
chr7 (11-184)||(27245206-27245380)
chr7 (11-139)||(25637245-25637374)
chr7 (11-161)||(48247961-48248112)
chr7 (11-161)||(15712391-15712541)
chr7 (11-184)||(11973772-11973945)
chr7 (11-184)||(48247590-48247767)
chr7 (11-184)||(39388636-39388811)
chr7 (11-161)||(5745665-5745815)
chr7 (11-184)||(24929673-24929851)
chr7 (11-184)||(26026320-26026494)
chr7 (11-161)||(27245574-27245724)
chr7 (11-134)||(14311368-14311492)
chr7 (13-144)||(14311659-14311790)
chr7 (11-184)||(16081302-16081475)
chr7 (11-139)||(35161171-35161300)
chr7 (11-184)||(787152-787329)
chr7 (13-160)||(26048319-26048465)
chr7 (13-161)||(786808-786957)
chr7 (11-146)||(26026688-26026823)
chr7 (11-161)||(7732857-7733007)
chr7 (11-146)||(11971375-11971514)
chr7 (11-184)||(34595142-34595315)
chr7 (49-161)||(5333906-5334018)
chr7 (11-132)||(5746009-5746132)
chr7 (30-184)||(28687596-28687750)
chr7 (75-184)||(5334253-5334362)
chr7 (27-144)||(9394117-9394233)
chr7 (11-146)||(26047998-26048124)
chr7 (45-146)||(4477743-4477844)
chr7 (67-161)||(16917739-16917833)
chr7 (12-97)||(35160892-35160976)
chr7 (11-130)||(34594640-34594758)
chr7 (25-93)||(33880969-33881036)
chr7 (48-184)||(9393739-9393874)
chr7 (13-184)||(33880623-33880794)
chr7 (27-184)||(35578902-35579058)
chr7 (27-131)||(39136742-39136845)
chr7 (45-132)||(45815470-45815557)
chr7 (197-265)||(8140001-8140069)
chr7 (49-184)||(49064037-49064171)
chr7 (99-184)||(39136991-39137076)
chr7 (37-93)||(5184488-5184544)
chr7 (76-145)||(45815383-45815454)
chr7 (11-132)||(35579256-35579376)
chr7 (80-135)||(18535321-18535377)
[»] chr2 (51 HSPs)
chr2 (11-184)||(11540008-11540181)
chr2 (11-184)||(42192243-42192416)
chr2 (11-184)||(42192612-42192786)
chr2 (11-184)||(20128107-20128280)
chr2 (13-184)||(4355758-4355929)
chr2 (11-161)||(62983-63133)
chr2 (11-184)||(4808882-4809055)
chr2 (11-161)||(38008321-38008471)
chr2 (11-184)||(649530-649702)
chr2 (11-139)||(16175719-16175848)
chr2 (11-184)||(33920615-33920788)
chr2 (11-160)||(43216079-43216228)
chr2 (13-184)||(43160012-43160184)
chr2 (11-161)||(11539663-11539814)
chr2 (11-184)||(38007953-38008127)
chr2 (11-184)||(16953304-16953477)
chr2 (19-139)||(13399470-13399590)
chr2 (11-184)||(44220013-44220188)
chr2 (11-114)||(5560920-5561023)
chr2 (11-161)||(44219670-44219820)
chr2 (14-146)||(20127777-20127910)
chr2 (11-184)||(63328-63507)
chr2 (14-184)||(6949454-6949625)
chr2 (11-161)||(32418185-32418333)
chr2 (11-161)||(33920981-33921132)
chr2 (11-161)||(4356126-4356276)
chr2 (19-139)||(15550721-15550842)
chr2 (11-146)||(4809249-4809384)
chr2 (13-146)||(43160382-43160516)
chr2 (11-184)||(13315496-13315673)
chr2 (11-130)||(13399790-13399909)
chr2 (11-184)||(9330164-9330338)
chr2 (11-161)||(16952961-16953113)
chr2 (11-161)||(17060932-17061084)
chr2 (11-128)||(15551044-15551162)
chr2 (45-135)||(32418550-32418640)
chr2 (29-184)||(31797166-31797320)
chr2 (49-184)||(6949850-6949987)
chr2 (26-184)||(24140064-24140217)
chr2 (11-184)||(28143400-28143572)
chr2 (11-93)||(22445734-22445816)
chr2 (13-91)||(43215805-43215883)
chr2 (11-184)||(25335977-25336143)
chr2 (11-88)||(9329980-9330056)
chr2 (77-161)||(5560077-5560161)
chr2 (27-184)||(14942230-14942389)
chr2 (79-146)||(5035904-5035972)
chr2 (73-174)||(2190506-2190609)
chr2 (76-145)||(5037132-5037202)
chr2 (27-93)||(18450925-18450991)
chr2 (80-161)||(20495219-20495301)
[»] chr3 (69 HSPs)
chr3 (11-184)||(25534893-25535067)
chr3 (9-183)||(55389609-55389783)
chr3 (11-184)||(40275464-40275636)
chr3 (11-184)||(51827960-51828133)
chr3 (11-184)||(51828542-51828716)
chr3 (11-184)||(330206-330379)
chr3 (11-184)||(40839022-40839195)
chr3 (11-184)||(52236819-52236992)
chr3 (11-184)||(52375701-52375874)
chr3 (13-161)||(38535667-38535815)
chr3 (13-184)||(52237189-52237360)
chr3 (14-184)||(40838655-40838825)
chr3 (11-161)||(49720397-49720547)
chr3 (11-184)||(49951916-49952089)
chr3 (11-184)||(51828910-51829083)
chr3 (11-161)||(47431722-47431873)
chr3 (11-161)||(51473225-51473376)
chr3 (11-161)||(46013448-46013598)
chr3 (11-184)||(32730392-32730565)
chr3 (11-184)||(55389967-55390140)
chr3 (11-184)||(40275096-40275271)
chr3 (13-137)||(51472905-51473029)
chr3 (11-161)||(46013792-46013943)
chr3 (11-145)||(32730759-32730893)
chr3 (11-161)||(43678321-43678471)
chr3 (11-161)||(49951572-49951722)
chr3 (11-161)||(34105018-34105170)
chr3 (11-128)||(50662782-50662899)
chr3 (11-161)||(41998255-41998406)
chr3 (11-146)||(52375368-52375503)
chr3 (14-184)||(43678657-43678827)
chr3 (11-161)||(44676842-44676992)
chr3 (13-145)||(2044313-2044445)
chr3 (23-134)||(44676525-44676636)
chr3 (11-184)||(14654561-14654732)
chr3 (19-145)||(38535351-38535477)
chr3 (11-161)||(2051321-2051475)
chr3 (26-184)||(22370599-22370758)
chr3 (11-184)||(30513725-30513898)
chr3 (11-161)||(34104664-34104813)
chr3 (11-128)||(51828327-51828445)
chr3 (11-184)||(43222393-43222566)
chr3 (49-184)||(16689361-16689496)
chr3 (49-184)||(49720769-49720904)
chr3 (53-161)||(329872-329980)
chr3 (17-146)||(43222765-43222895)
chr3 (11-184)||(41998600-41998771)
chr3 (20-184)||(16701168-16701335)
chr3 (11-184)||(39010078-39010250)
chr3 (17-161)||(14654225-14654361)
chr3 (27-184)||(36701482-36701639)
chr3 (27-184)||(50900914-50901070)
chr3 (11-132)||(55192173-55192293)
chr3 (11-184)||(27199705-27199878)
chr3 (11-184)||(37075689-37075864)
chr3 (10-184)||(49407799-49407972)
chr3 (27-146)||(8874072-8874191)
chr3 (27-184)||(27200078-27200234)
chr3 (27-184)||(37076060-37076217)
chr3 (27-184)||(36701109-36701268)
chr3 (27-145)||(37847206-37847323)
chr3 (27-93)||(49408169-49408232)
chr3 (27-161)||(50900558-50900692)
chr3 (27-184)||(8873694-8873850)
chr3 (27-132)||(2323434-2323538)
chr3 (43-146)||(12140978-12141081)
chr3 (79-139)||(12141128-12141189)
chr3 (96-184)||(33412609-33412697)
chr3 (27-89)||(5137365-5137427)
[»] chr8 (37 HSPs)
chr8 (11-184)||(28254796-28254969)
chr8 (11-184)||(41260631-41260804)
chr8 (11-184)||(35427182-35427355)
chr8 (15-184)||(599535-599704)
chr8 (11-184)||(9796729-9796902)
chr8 (11-184)||(18049961-18050134)
chr8 (11-161)||(18428131-18428282)
chr8 (11-184)||(5731182-5731355)
chr8 (11-184)||(7910986-7911159)
chr8 (11-184)||(42035775-42035948)
chr8 (11-139)||(34799453-34799581)
chr8 (11-161)||(18049616-18049767)
chr8 (11-161)||(28254451-28254602)
chr8 (11-184)||(16578111-16578285)
chr8 (14-131)||(26252865-26252982)
chr8 (11-161)||(35693894-35694046)
chr8 (12-184)||(6115481-6115654)
chr8 (14-161)||(42036144-42036292)
chr8 (53-184)||(15255856-15255987)
chr8 (11-184)||(34799082-34799256)
chr8 (10-161)||(599867-600018)
chr8 (11-161)||(9797096-9797247)
chr8 (11-124)||(16578466-16578579)
chr8 (16-145)||(15256203-15256335)
chr8 (13-184)||(7910619-7910791)
chr8 (13-144)||(35694242-35694381)
chr8 (25-161)||(5730843-5730979)
chr8 (11-115)||(35426885-35426989)
chr8 (49-145)||(41260313-41260409)
chr8 (11-161)||(2208740-2208891)
chr8 (11-70)||(35163815-35163874)
chr8 (79-129)||(18674206-18674256)
chr8 (11-184)||(28877260-28877432)
chr8 (27-131)||(18805219-18805322)
chr8 (234-265)||(4799320-4799351)
chr8 (71-130)||(10047066-10047125)
chr8 (89-132)||(28876958-28877002)
[»] chr4 (55 HSPs)
chr4 (10-184)||(46737024-46737198)
chr4 (11-184)||(14439831-14440004)
chr4 (12-184)||(56077695-56077867)
chr4 (11-161)||(28465107-28465257)
chr4 (11-184)||(34789752-34789926)
chr4 (11-184)||(34807119-34807293)
chr4 (11-161)||(14440198-14440348)
chr4 (11-161)||(28465451-28465601)
chr4 (11-161)||(34789408-34789558)
chr4 (11-161)||(54440939-54441089)
chr4 (11-184)||(21034606-21034780)
chr4 (11-184)||(54440574-54440745)
chr4 (11-184)||(55677327-55677501)
chr4 (24-184)||(19528872-19529033)
chr4 (11-180)||(45838554-45838723)
chr4 (11-184)||(12593393-12593566)
chr4 (11-137)||(24851835-24851962)
chr4 (13-159)||(12593052-12593198)
chr4 (14-184)||(33689832-33690001)
chr4 (15-161)||(21034261-21034408)
chr4 (11-161)||(35193334-35193483)
chr4 (11-184)||(45838917-45839092)
chr4 (11-184)||(34807509-34807682)
chr4 (11-161)||(41114183-41114335)
chr4 (11-146)||(26974324-26974460)
chr4 (11-161)||(6616698-6616849)
chr4 (11-184)||(41608377-41608551)
chr4 (49-139)||(6617070-6617160)
chr4 (11-161)||(16214865-16215015)
chr4 (11-184)||(28166007-28166180)
chr4 (13-162)||(46736680-46736829)
chr4 (13-139)||(36168377-36168506)
chr4 (13-93)||(24851559-24851639)
chr4 (11-161)||(35643581-35643743)
chr4 (11-184)||(229164-229337)
chr4 (11-131)||(19529063-19529184)
chr4 (11-184)||(229529-229702)
chr4 (53-135)||(33778024-33778106)
chr4 (11-161)||(36168701-36168851)
chr4 (11-146)||(17504329-17504464)
chr4 (21-146)||(18965181-18965306)
chr4 (59-184)||(26974662-26974788)
chr4 (55-132)||(40160149-40160225)
chr4 (11-146)||(17504015-17504149)
chr4 (11-146)||(24336133-24336268)
chr4 (28-146)||(24335802-24335920)
chr4 (53-124)||(33777695-33777766)
chr4 (18-115)||(18965513-18965610)
chr4 (51-97)||(35643968-35644014)
chr4 (47-184)||(40160497-40160633)
chr4 (28-184)||(35193691-35193845)
chr4 (73-131)||(23986576-23986635)
chr4 (73-131)||(30597951-30598009)
chr4 (27-64)||(18751723-18751760)
chr4 (96-161)||(41608870-41608935)
[»] chr6 (22 HSPs)
chr6 (11-161)||(5114494-5114644)
chr6 (11-184)||(31073512-31073685)
chr6 (11-184)||(31574095-31574268)
chr6 (11-161)||(24640555-24640705)
chr6 (20-137)||(5120848-5120965)
chr6 (11-161)||(25472382-25472533)
chr6 (14-127)||(29891453-29891566)
chr6 (11-114)||(28636566-28636669)
chr6 (11-134)||(29891133-29891256)
chr6 (11-161)||(25468875-25469027)
chr6 (11-128)||(31573780-31573901)
chr6 (43-184)||(28636295-28636435)
chr6 (14-128)||(30251064-30251179)
chr6 (11-106)||(30250772-30250867)
chr6 (12-184)||(35163557-35163730)
chr6 (18-130)||(11523741-11523854)
chr6 (43-184)||(33095717-33095858)
chr6 (47-145)||(31073185-31073290)
chr6 (47-184)||(32836403-32836539)
chr6 (42-146)||(835435-835538)
chr6 (68-184)||(35163187-35163303)
chr6 (45-93)||(22534164-22534211)
[»] chr1 (57 HSPs)
chr1 (11-139)||(30786820-30786948)
chr1 (11-139)||(52335880-52336008)
chr1 (13-184)||(8230013-8230184)
chr1 (11-161)||(21938589-21938739)
chr1 (11-184)||(1837508-1837681)
chr1 (11-184)||(10278551-10278725)
chr1 (11-184)||(17641734-17641912)
chr1 (13-146)||(2868080-2868213)
chr1 (11-184)||(16298685-16298858)
chr1 (11-161)||(34555750-34555902)
chr1 (11-184)||(44954596-44954769)
chr1 (11-134)||(443921-444044)
chr1 (13-134)||(4080074-4080195)
chr1 (11-160)||(9992182-9992331)
chr1 (11-161)||(8229663-8229816)
chr1 (11-161)||(44582083-44582233)
chr1 (11-184)||(44954229-44954402)
chr1 (11-184)||(34555382-34555557)
chr1 (11-184)||(37421163-37421338)
chr1 (11-184)||(29438933-29439107)
chr1 (11-184)||(37505438-37505610)
chr1 (14-184)||(1744331-1744500)
chr1 (14-161)||(16299055-16299201)
chr1 (13-146)||(17641406-17641539)
chr1 (11-184)||(23340186-23340359)
chr1 (21-184)||(2867914-2868077)
chr1 (11-145)||(9992525-9992659)
chr1 (13-160)||(10278922-10279066)
chr1 (27-184)||(39485068-39485224)
chr1 (27-184)||(45048158-45048314)
chr1 (11-184)||(50926611-50926784)
chr1 (11-128)||(6224756-6224875)
chr1 (23-161)||(37505093-37505232)
chr1 (11-132)||(9833522-9833643)
chr1 (11-134)||(50926283-50926408)
chr1 (11-161)||(44582427-44582579)
chr1 (11-145)||(50305152-50305289)
chr1 (11-132)||(29021234-29021356)
chr1 (11-93)||(50304876-50304958)
chr1 (11-146)||(23526699-23526833)
chr1 (49-161)||(29439329-29439442)
chr1 (31-184)||(44291701-44291854)
chr1 (27-184)||(17088526-17088682)
chr1 (45-184)||(45048540-45048678)
chr1 (27-132)||(44802557-44802662)
chr1 (94-184)||(50304442-50304532)
chr1 (11-131)||(29020936-29021056)
chr1 (11-93)||(30787142-30787224)
chr1 (343-411)||(10915644-10915713)
chr1 (12-132)||(44291356-44291477)
chr1 (39-165)||(48174113-48174246)
chr1 (83-184)||(37421386-37421488)
chr1 (11-184)||(17088149-17088326)
chr1 (74-183)||(25274760-25274869)
chr1 (88-161)||(30787245-30787318)
chr1 (25-132)||(48173803-48173911)
chr1 (53-145)||(23526942-23527034)
[»] scaffold0097 (2 HSPs)
scaffold0097 (11-184)||(46269-46443)
scaffold0097 (11-161)||(46637-46788)
[»] scaffold0712 (2 HSPs)
scaffold0712 (11-161)||(6418-6568)
scaffold0712 (11-161)||(6761-6916)
[»] scaffold0709 (2 HSPs)
scaffold0709 (11-161)||(6436-6586)
scaffold0709 (11-161)||(6779-6934)
[»] scaffold0025 (1 HSPs)
scaffold0025 (11-109)||(78395-78493)
[»] scaffold0007 (3 HSPs)
scaffold0007 (11-184)||(205738-205910)
scaffold0007 (27-109)||(205028-205110)
scaffold0007 (97-184)||(210793-210880)
[»] scaffold0108 (1 HSPs)
scaffold0108 (39-184)||(15497-15641)
[»] scaffold1432 (1 HSPs)
scaffold1432 (74-146)||(498-570)
[»] scaffold0021 (1 HSPs)
scaffold0021 (43-131)||(159283-159371)


Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 199 - 457
Target Start/End: Original strand, 6768435 - 6768691
Alignment:
Q  199 ttattatttgaggggtttacgcatagatatgatgcgttcaatttctcttttctcatctcttattttaattttggatatattttgttacttttgaaactca 298  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||    
T  6768435 ttattatttgaggggtttacgcatagatattgtgcgttcaatttctcttttcccgtctcttattttaattttggatatattttgttacttt-gaaactca 6768533  T
Q  299 acaaaaattaggttttaactgcgttataataaatccgtcccttttcaatttgctttgatgacaaacactaatttttc-atcaaaatctttgtattatact 397  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  6768534 acaaa--ttaggttttaactgcgttataataaatccgtcccttttcaatttgctttgatggcaaacactaatttttttatcaaaatctttgtattatact 6768631  T
Q  398 actatttttccttgtgttactactaatcattttgaatatttgtttttgttttaccataaa 457  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6768632 actatttttccttgtgttactactaatcactttgaatatttgtttttgttttaccataaa 6768691  T

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Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 21371066 - 21371194
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21371066 agcataggtggttgaactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttagggacg 21371165  T
Q  111 attttattcgatttaaaagaggtaggacc 139  Q
    ||||| || ||||||||||||||||||||    
T  21371166 attttgtttgatttaaaagaggtaggacc 21371194  T

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Target: chr5; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 28290014 - 28290164
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28290014 agcatagatggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 28290113  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| ||||||||||||  | ||||||| ||||||  ||||| |||||||    
T  28290114 attttgttcgatttaaaaatgataggaccattttcgtgagttggtcaaaat 28290164  T

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Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 15029679 - 15029852
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| |||||    
T  15029679 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaacatatagtttaaggacg 15029778  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||| ||||| |||| ||||||  ||||| |||||||  || ||| |||| |||||||||    
T  15029779 attttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaa 15029852  T

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Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 28289858 - 28289737
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  28289858 cataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaacatataatttagggacgat 28289759  T
Q  113 tttattcgatttaaaagaggta 134  Q
    ||| ||||||||||||||||||    
T  28289758 tttgttcgatttaaaagaggta 28289737  T

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Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 38900818 - 38900648
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38900818 agcataggtggttggactaa--ctgtcatttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatataatttagggacg 38900721  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaatta 183  Q
    ||||| ||||||||||||||||||||| | ||||||  ||||| ||||||| ||| ||| |||| ||||||||    
T  38900720 attttgttcgatttaaaagaggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 18150093 - 18150222
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    |||||||||||||| |||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  18150093 agcataggtggttgaactaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggat 18150192  T
Q  110 gattttattcgatttaaaagaggtaggacc 139  Q
    |||||| |||||||||||||||||||||||    
T  18150193 gattttgttcgatttaaaagaggtaggacc 18150222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 19291533 - 19291359
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||    
T  19291533 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggac 19291434  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||| || ||||||| |||| |  ||||| ||||||||  | ||| |||| |||||||||    
T  19291433 gattttgttcgatttaaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaa 19291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 4967139 - 4967314
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaacatatagtttaggga 108  Q
    |||||| |||||||||||||||||  ||||| ||||||||||| ||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  4967139 agcatatgtggttggactaaaactatcatttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaacatatagtttaggga 4967238  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||| |||||||||||||||||| |||| |||| |  ||||| |||||||  || ||| |||| |||||||||    
T  4967239 cgattttgttcgatttaaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 4967314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 32697593 - 32697769
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaa---aacatatagtttaggg 107  Q
    |||||||||||||||||||||  || ||||| |||| |||||||||||||||||||||||| ||  |||||||||||||||   ||||||||||||||||    
T  32697593 agcataggtggttggactaaatttgtcatttctgtgtgtttctggagttggaaatagggaggtatcactaaaactgcaaaataaaacatatagtttaggg 32697692  T
Q  108 acgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| | |||||||||||||||||||||||  |||||  ||||| ||||||| | ||||| |||| |||||||||    
T  32697693 acgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaa 32697769  T

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Target: chr5; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 4966991 - 4966819
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||| | ||||||| ||||| ||||| ||||| ||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  4966991 agcataggtggttggcccaaaactgtcatttctgtgcatttctagagttggaaataggg-gatatgactaaaactgctaaaaacatatagtttagggacg 4966893  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||| || ||  ||||||  ||||| ||||||| ||| ||| |||| |||||||||    
T  4966892 attttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 8418991 - 8419140
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  8418991 agcataggtgtttggattaaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-atatagtttaaggacg 8419089  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| ||| |||||||| || ||||||| | ||||  ||||| |||||||    
T  8419090 attttgttcaatttaaaaaagataggaccatattcgtgagttggtcaaaat 8419140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 22651521 - 22651348
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||||| |||||||| |||     
T  22651521 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgca-aaaacatgatagtttaaggat 22651423  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | |||| || ||||||||||||| | |||| ||| ||  || || |||||||||||  || ||||||||||||||    
T  22651422 ggttttgtttgatttaaaagaggcatgaccatttccgtgagctggtcaaaatacgagaaccaaaaatgtaattaa 22651348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 15115465 - 15115612
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| ||||||| |||||||||| ||||| ||||||||| | ||||||||||||||| |||| ||||||||||||||||   |||||||||| |||||    
T  15115465 agcatatgtggttgaactaaaactgtcatttatgtgcgttttttgagttggaaatagggcgatatgactaaaactgcaaaa---atatagtttaaggacg 15115561  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| ||||||||||||||||||||||| ||||||  ||||| |||||||    
T  15115562 attttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaat 15115612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 38901020 - 38901145
Alignment:
Q  19 tggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttatt 118  Q
    ||||||||||||||||| ||||| |||||||||||||  ||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||| ||    
T  38901020 tggttggactaaaactgtcatttatgtgcgtttctgg--ttggaaataaggagatataactaaaactgcaaaaaacatatagtttaaggacgattttgtt 38901117  T
Q  119 cgatttaaaagaggtaggaccgttttcg 146  Q
    ||||||||||  ||||||||| ||||||    
T  38901118 cgatttaaaaagggtaggaccattttcg 38901145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 18149867 - 18149774
Alignment:
Q  53 tggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||| ||||||    
T  18149867 tggagttggaaatagggaaataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcg 18149774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 39083536 - 39083384
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa--acatatagtttaggga 108  Q
    |||||| ||| |||||||||||||| ||||| |||| ||||||||||||||||||| ||||||| |||||||||||||||||  | |||||||||| | |    
T  39083536 agcatatgtgattggactaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaaatatatatagtttaagaa 39083437  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    | ||||| |||||||||||| |  ||||||| ||||||  ||||| |||||||    
T  39083436 caattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaat 39083384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 14340785 - 14340953
Alignment:
Q  19 tggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttagggacgatttt 115  Q
    ||||| ||||||||||| ||||| | | ||||| |||||||||||||| |||||||||||||||||| |   |||||| |||||||||| ||||||||||    
T  14340785 tggtttgactaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaactacaaaaaaaaatatatagtttatggacgatttt 14340884  T
Q  116 attcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
     |||||||||||||| ||| ||||  |||||  ||||| ||||||| | |  || ||||||||||||||    
T  14340885 gttcgatttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 21370870 - 21370689
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgt--gcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat--------atagtt 102  Q
    |||||||||| |||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||| ||        ||||||    
T  21370870 cataggtggtcggactaaaactgacatttttttttgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaaaataaaaaataatagtt 21370771  T
Q  103 tagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||  ||||||||| |||||||||||| || ||  ||| ||||||  ||||| ||||||||  | |||||||||| |||||||    
T  21370770 taaagacgattttgttcgatttaaaaaagatataaccattttcgtcagttggtcaaaatagtaggacaaaaaatataattaa 21370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 175
Target Start/End: Complemental strand, 32305977 - 32305830
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    ||||||||| ||||| | || ||||||||||||| ||||| | || |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  32305977 ctaaaactgtcatttctctgtgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaa-catgatagtttagggacgattttgttcgattta 32305880  T
Q  126 aaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaa 175  Q
    |||||||||| ||  ||||||  || |||||||||| ||||||| |||||    
T  32305879 aaagaggtagaacaattttcgtgagctgatcaaaatgcgatgaccaaaaa 32305830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 5161759 - 5161641
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    |||||||||||||| |||||||||| ||||| | ||||||| || ||||||||||||| ||||| |||||||||||||| |||||||||| ||||  |||    
T  5161759 agcataggtggttgaactaaaactgtcatttctatgcgtttttgaagttggaaataggaagataagactaaaactgcaaaaaaacatataatttaaagac 5161660  T
Q  110 gattttattcgatttaaaa 128  Q
     ||||| ||||||||||||    
T  5161659 aattttgttcgatttaaaa 5161641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 5161976 - 5162062
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaa-aacatatagtttagggacgattttattcgatttaaaagaggta 134  Q
    |||||| ||||| |||| ||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  5161976 tttctgaagttgtaaattgggagataggactaaaattgcaaaaaaacatataatttagggacgattttgttcgatttaaaagaggta 5162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 10721945 - 10721789
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    ||||||||| ||||| | | |||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||| |||||||||| ||||||||     
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacgattttgttcgatttg 10721848  T
Q  126 aaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||  | |||| ||||||  || || |||||||  || ||| ||||||||||||||    
T  10721847 aaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaa 10721789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 16752955 - 16753113
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa--cat-atagtttagggacgattttattcgatt 123  Q
    ||||||||||||||||| |||||||||||||||| ||||||| || |||| ||||||||||||||||  ||| ||| |||||| | | |||  |||||||    
T  16752955 ctaaaactgccatttttctgcgtttctggagttgaaaatagg-agttaggtctaaaactgcaaaaaaaacatgataatttagg-atggtttcgttcgatt 16753052  T
Q  124 taaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | ||||||| || ||| ||||||  ||||| ||||||| ||||||| ||||||||||||||    
T  16753053 tgaaagaggcagaaccattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaa 16753113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 16752757 - 16752639
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||| ||| || ||||||||  ||||| | ||||||| |||||||| ||||||| || || ||| ||||||||||||||||||||||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggagttgaaaatagg-aggtatgacaaaaactgcaaaaaacatatagtttatggacg 16752659  T
Q  111 attttattcgatttaaaaga 130  Q
    ||||| |||||||| |||||    
T  16752658 attttgttcgatttgaaaga 16752639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 14340554 - 14340479
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgca 88  Q
    |||| |||||||||||||||||| ||||| |||  |||||| ||||||||||||| ||||||||| ||||||||||    
T  14340554 cataagtggttggactaaaactgtcatttctgtaggtttctagagttggaaatagagagataggattaaaactgca 14340479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 41834445 - 41834602
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacat-atagtttagggacgattttattcgattt 124  Q
    ||||||||| ||||| | ||||||||  |||||| ||||||| || ||||||||||||||| ||||||||| |||||||| ||||| |||| |||||| |    
T  41834445 ctaaaactgtcatttctctgcgtttcaagagttgaaaatagg-aggtaggactaaaactgcaaaaaaacatgatagttta-ggacggttttgttcgatct 41834542  T
Q  125 aaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
     ||||||| |||||| ||||||  || || ||||||| ||| ||| |||| |||||||||    
T  41834543 gaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 41834602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 27307220 - 27307064
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    ||||||||| ||||| | |||||||||||||||| ||||| |||| || ||||||||||||||||||||| |||||||| ||| |||||| ||| ||||     
T  27307220 ctaaaactgtcatttctatgcgtttctggagttgaaaata-ggaggtaagactaaaactgcaaaaaacatgatagttta-ggatgattttgttcaatttg 27307123  T
Q  126 aaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||   | |||| |||||  |||||| ||||||| |||  || |||| |||||||||    
T  27307122 aaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaa 27307064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 145
Target Start/End: Complemental strand, 28494985 - 28494886
Alignment:
Q  45 tgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttt 143  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||| ||||  |||| |||||||| ||||||| || ||| |||    
T  28494985 tgcgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacagttttgttcgatttgaaagaggcagaaccattt 28494888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 20266346 - 20266458
Alignment:
Q  73 taggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaa 171  Q
    ||||||||||||| ||| || ||| ||||||||||||||||||| |||||||| ||||||  | |||| |||||| ||| || ||||||||||| ||| |    
T  20266346 taggactaaaactacaacaaccatgatagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaatacgaggacca 20266445  T
Q  172 aaaatgtaattaa 184  Q
    ||| || ||||||    
T  20266446 aaagtgcaattaa 20266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 27307444 - 27307565
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaa---aacatatagtttagggacgattttattcgatt 123  Q
    |||||| || ||||| | ||| |||||||||||| ||||||| || ||||||||||||| |||||   ||||||||||||| ||||| |||| |||||||    
T  27307444 ctaaaaatgtcatttctctgcatttctggagttgaaaatagg-aggtaggactaaaactacaaaaaaaaacatatagtttatggacggttttgttcgatt 27307542  T
Q  124 taaaagaggtaggaccgttttcg 146  Q
    | ||||||| || ||| ||||||    
T  27307543 tgaaagagggagaaccattttcg 27307565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 14340478 - 14340401
Alignment:
Q  107 gacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||| |||||||||||| || ||||||| ||||||  |||||||||||||   | ||| ||||||||||||||    
T  14340478 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 22651715 - 22651760
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctgga 56  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  22651715 agcataggtggttggactaaaactgtcatttatgtgcgtttatgga 22651760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 32697511 - 32697458
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaa 64  Q
    |||||||||||||||||||||  || ||||| |||| |||||||||||||||||    
T  32697511 agcataggtggttggactaaatttgtcatttctgtgtgtttctggagttggaaa 32697458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 28495227 - 28495294
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaca 95  Q
    ||||||||  ||||| | |||| ||||||||||| ||||||| || |||||||||||||||||||||||    
T  28495227 ctaaaactatcatttctctgcggttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaaca 28495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 13557106 - 13557033
Alignment:
Q  73 taggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| || ||||| ||||||| | |||| ||||||    
T  13557106 taggactaaaactgcaaaaaacatgatagttta-agacgattttgtttgatttgaaagaggcatgaccattttcg 13557033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 14464954 - 14465000
Alignment:
Q  79 taaaactgcaaaaaacat-atagtttagggacgattttattcgattt 124  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||    
T  14464954 taaaactgcaaaaaatatgataatttagggacgattttattcgattt 14465000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 17260441 - 17260383
Alignment:
Q  73 taggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaaga 130  Q
    |||||||||||||||||||||||| ||| |||| |||| ||||| |||||||| |||||    
T  17260441 taggactaaaactgcaaaaaacatgataatttatggacaattttgttcgatttgaaaga 17260383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 21769641 - 21769597
Alignment:
Q  88 aaaaaacatatagtttagggacgattttattcgatttaaaagagg 132  Q
    |||||| |||||||||||||||| |||| |||||||| |||||||    
T  21769641 aaaaaatatatagtttagggacggttttgttcgatttgaaagagg 21769597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 5e-60; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 7732664 - 7732491
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7732664 agcataggtggttggactaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 7732565  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||||||||  |||||  ||||||||||||| | | ||| ||||||||||||||    
T  7732564 attttgttcgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 7732491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 9181708 - 9181558
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  9181708 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacg 9181609  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  9181608 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 9181558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 25637568 - 25637718
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25637568 agcataggtggttggactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 25637667  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  25637668 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 25637718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 16081671 - 16081795
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16081671 cataagtggttggactaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggatgat 16081770  T
Q  113 tttattcgatttaaaagaggtagga 137  Q
    ||| |||||||||||||||||||||    
T  16081771 tttgttcgatttaaaagaggtagga 16081795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 28687869 - 28687992
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  28687869 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgcaaaaaacatatagtttagggacg 28687968  T
Q  111 attttattcgatttaaaagaggta 134  Q
    ||||| ||||||||||||||||||    
T  28687969 attttgttcgatttaaaagaggta 28687992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 9181779 - 9181905
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactg---caaaaaacatatagtttaggg 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||    
T  9181779 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacatatagtttaggg 9181878  T
Q  108 acgattttattcgatttaaaagaggta 134  Q
    |||||||| ||||||||||||||||||    
T  9181879 acgattttgttcgatttaaaagaggta 9181905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 2758067 - 2758241
Alignment:
Q  10 tagcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggac 109  Q
    ||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||| ||||    
T  2758067 tagcataagtggttggactaaaactgtcatttatatgcgtttctggagttagaaatagggggatatgactaaacctgcaaaaaacatatagtttatggac 2758166  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| ||||||||||||||||||| ||| ||||||  |||||| |||||| ||| ||| |||| |||||||||    
T  2758167 gattttgttcgatttaaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaa 2758241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 27245380 - 27245206
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||| |||||    
T  27245380 agcataggtggttggactaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggac 27245281  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  27245280 gattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 27245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 25637374 - 25637245
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    |||||||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  25637374 agcataggtggttggcttaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacatatagtttagggac 25637275  T
Q  110 gattttattcgatttaaaagaggtaggacc 139  Q
    |||||| |||||||||||||||||||||||    
T  25637274 gattttgttcgatttaaaagaggtaggacc 25637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 48247961 - 48248112
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  48247961 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggac 48248060  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || ||||||| |||| |  ||||| |||||||    
T  48248061 gattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaaat 48248112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 15712541 - 15712391
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  15712541 agcatatgtggttggactaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaaatatatagtttaaggacg 15712442  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  15712441 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 15712391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 11973772 - 11973945
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||| ||| || ||||||||||    
T  11973772 agcataggtggttggactaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgcaaaaaccatttaatttagggacg 11973871  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||| ||||||||||||||| |||  ||||| | |||| ||||||| | | ||| ||||||||||||||    
T  11973872 attttgttcaatttaaaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 48247767 - 48247590
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa----aaaacatatagtttagg 106  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||||||||    |||| ||||| ||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaaaaatatatactttagg 48247668  T
Q  107 gacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||| || ||||||||||||||||||||  |||||  ||||||||||||| | | ||| |||| |||||||||    
T  48247667 gacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 48247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 39388636 - 39388811
Alignment:
Q  11 agcataggtggttggactaaaactgccatttt-tgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttaggga 108  Q
    |||||| |||||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||    
T  39388636 agcatatgtggttggactaaaactgtcattttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaacatatagtttagaga 39388735  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||| ||||||||||||||||||||||   |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  39388736 cgattttgttcgatttaaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 39388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 5745815 - 5745665
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | | |    
T  5745815 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgcaaaaaacatatagtttaagaaag 5745716  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || || |||| ||||||  ||||| |||||||    
T  5745715 attttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaat 5745665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 24929673 - 24929851
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa-----acatatagtttag 105  Q
    ||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||     | |||||||||||    
T  24929673 agcataggtcgttggactaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaaatatatatagtttag 24929772  T
Q  106 ggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||||| || ||||||||||||||| ||||  |||||  ||||| ||||||| | | ||| ||||||||||||||    
T  24929773 ggacgattttgtttgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 24929851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 26026494 - 26026320
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    |||||| ||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  26026494 agcatatgtggttgaactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggac 26026395  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||| ||||  |||||  || || ||||||||| | ||| |||| |||||||||    
T  26026394 gattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 27245574 - 27245724
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||| |||||    
T  27245574 agcataggtggttggactaaaactatgatttctgtgcgtttctggagttggaaatagggagatatgactaaaattgcaaaatacatataatttaaggacg 27245673  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  |||||||||||||    
T  27245674 attttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaat 27245724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 14311492 - 14311368
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactg-caaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  14311492 agcataggtggttggactaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactgtaaaaaaacatatagtttagggac 14311393  T
Q  110 gattttattcgatttaaaagaggta 134  Q
    |||||||||| ||||||||||||||    
T  14311392 gattttattcaatttaaaagaggta 14311368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 14311659 - 14311790
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||    
T  14311659 cataggtggttggactaaaattgtcatttctgtgcgtttctagagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaagacgat 14311758  T
Q  113 tttattcgatttaaaagaggtaggaccgtttt 144  Q
    ||| |||||||||||| || ||||||| ||||    
T  14311759 tttgttcgatttaaaaaagataggaccatttt 14311790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 16081475 - 16081302
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  16081475 agcatatgtggttggactaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaaacaaatagtttaaggacg 16081376  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||| || ||||||| ||| |   ||||| ||||||||  | ||| |||| |||||||||    
T  16081375 attttgttcgatttaaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaa 16081302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 35161171 - 35161300
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    |||||||||||| || | ||||||  ||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  35161171 agcataggtggtcggcccaaaactatcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggac 35161270  T
Q  110 gattttattcgatttaaaagaggtaggacc 139  Q
    |||||| |||||||||||||||||||||||    
T  35161271 gattttgttcgatttaaaagaggtaggacc 35161300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 787152 - 787329
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaa----aaacatatagtttagg 106  Q
    |||||| |||||||||||||||||  ||||| |||||||||||||||||| ||||| | ||||| |||||||||| ||||    ||||| ||||||||||    
T  787152 agcatatgtggttggactaaaactatcatttatgtgcgtttctggagttgaaaatatgaagataagactaaaactacaaattaaaaacaaatagtttagg 787251  T
Q  107 gacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||| ||||||||||||||||||||||| ||||||  ||||| |||||||||||  || |||| |||||||||    
T  787252 gacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 26048319 - 26048465
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    ||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| ||    
T  26048319 cataggtggttggactaaaactgtcatttatgtgcatttttggagttggaaatagggagatatgactaaaactgc-aaaaacatatagtttaaggacaat 26048417  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaa 160  Q
    ||| || ||||||||||||||||||||  |||||  ||||| ||||||    
T  26048418 tttgtttgatttaaaagaggtaggaccaatttcgtgagttggtcaaaa 26048465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 786957 - 786808
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggacga 111  Q
    |||||||||||| |||||||||| || || ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||  |    
T  786957 cataggtggttgaactaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggaaaa 786858  T
Q  112 ttttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||| |||||||||||| ||||| |||| ||||||  ||||| |||||||    
T  786857 ttttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaaat 786808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 26026688 - 26026823
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| |    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgcaaaaaacatatagtttaaggatg 26026787  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcg 146  Q
     |||| ||||||||| || || ||||||| ||||||    
T  26026788 gttttgttcgatttataaaagataggaccattttcg 26026823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 7732857 - 7733007
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||| || ||  |||| ||||| ||| |||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7732857 agcataggtggttggactagaattgttatttctgtgcatttatggagttgaaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacg 7732956  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||| | ||||||  ||||| |||||||    
T  7732957 attttgttcgatttaaaaaagataggatcattttcgtgagttggtcaaaat 7733007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 11971514 - 11971375
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactg----caaaaaacatatagtttagg 106  Q
    ||||||||||||||||||||||||| ||||| |||| |||||| || |||||||||||||||||||||||||||||     ||||||||||||||||| |    
T  11971514 agcataggtggttggactaaaactgtcatttatgtgtgtttctagaattggaaatagggagataggactaaaactgtaaaaaaaaaacatatagtttaag 11971415  T
Q  107 gacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||||||||| |||||||||||| || ||||||| ||||||    
T  11971414 gacgattttgttcgatttaaaaaagataggaccattttcg 11971375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 34595142 - 34595315
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||||| || | ||| ||||||||||| |||||||| |||||||||||||    
T  34595142 agcatgggtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgc-aaaaacatgatagtttagggac 34595240  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||| | |||||| ||||||  ||||| |||||||  || ||| |||| |||||||||    
T  34595241 gattttgttcgatttaaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 34595315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 5334018 - 5333906
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaa 148  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||      
T  5334018 tttctggagtaggaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtacgaccattttcgtg 5333919  T
Q  149 agttgatcaaaat 161  Q
    ||||| |||||||    
T  5333918 agttggtcaaaat 5333906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 5746009 - 5746132
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaacatatagtttaggga 108  Q
    |||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||| |||  ||||||||||||||||| |||    
T  5746009 agcataggtgattggactaaaactgtcatttatgtgcgtttatggagttggaaatagggagataagactaaaattgcaaaaaaaacatatagtttatgga 5746108  T
Q  109 cgattttattcgatttaaaagagg 132  Q
    || |||| ||||||||||||||||    
T  5746109 cggttttgttcgatttaaaagagg 5746132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 184
Target Start/End: Complemental strand, 28687750 - 28687596
Alignment:
Q  30 aaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaag 129  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||| ||||||||| ||     
T  28687750 aaactgtcatttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaaatatagtttaaggacgattttgttcgatttataaa 28687651  T
Q  130 aggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    || ||| ||| ||||||  ||||| |||||||   ||||| |||| |||||||||    
T  28687650 agatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaa 28687596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 5334253 - 5334362
Alignment:
Q  75 ggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaa 174  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  ||||||  ||||| |||||||  || ||| ||||    
T  5334253 ggactaaaactgcaaaaaatatatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaa 5334352  T
Q  175 atgtaattaa 184  Q
     |||||||||    
T  5334353 gtgtaattaa 5334362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 9394117 - 9394233
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaa 126  Q
    ||||||||| ||||| | || |||| || ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||||| |    
T  9394117 ctaaaactgtcatttctttgtgtttttgaagttggaaatagg-agataggactaaaactgcaaaaaatatatagtttagggacggttttgttcgatttga 9394215  T
Q  127 aagaggtaggaccgtttt 144  Q
    || |||||||||| ||||    
T  9394216 aaaaggtaggaccatttt 9394233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 26048124 - 26047998
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||     |||     ||||||||||||||| ||||     
T  26048124 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggacatagg----caac-----aaaacatatagtttaaggaca 26048034  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcg 146  Q
    |||||||||||||||||| || || |||| ||||||    
T  26048033 attttattcgatttaaaaaagatatgaccattttcg 26047998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 4477844 - 4477743
Alignment:
Q  45 tgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttt 143  Q
    ||||||||||||||| ||||   |||| |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||  ||||| |||    
T  4477844 tgcgtttctggagtttgaaaataggaggtaggactaaaactgcaaaaa-catgatagtttagggacgattttattcaatttaaaagaggcgggaccattt 4477746  T
Q  144 tcg 146  Q
    |||    
T  4477745 tcg 4477743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 16917833 - 16917739
Alignment:
Q  67 gggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||| || || |||| ||||||  ||||| |||||||    
T  16917833 gggagatatgactaaaactgcaaaaaacatatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaat 16917739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 35160976 - 35160892
Alignment:
Q  12 gcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacata 97  Q
    |||||||||||||||||||||||  ||||| |||||| | ||||||||| |||||||||||||||||||||| | |||||||||||    
T  35160976 gcataggtggttggactaaaactatcatttctgtgcgct-ctggagttgaaaatagggagataggactaaaattacaaaaaacata 35160892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 34594758 - 34594640
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    ||||||||||||||||||||||||  ||||| |||  |||||| |||||| |||||||| | ||||||||||||||| |||||||| ||||||||||||     
T  34594758 agcataggtggttggactaaaactatcatttatgtttgtttctcgagttgaaaataggg-ggtaggactaaaactgc-aaaaacatgatagtttagggat 34594661  T
Q  110 gattttattcgatttaaaaga 130  Q
    |||||| || |||| ||||||    
T  34594660 gattttgtttgattgaaaaga 34594640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 33880969 - 33881036
Alignment:
Q  25 gactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  33880969 gactaaaactgtcatttatgtgcgtttctggagttgaaaataggg-gataagactaaaactgcaaaaaa 33881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 9393874 - 9393739
Alignment:
Q  48 gtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||||||||||||| ||||||| || |||||||||||| ||||||||||| |||||||| ||||| |||| |||||||| ||||||| | |||  ||||||    
T  9393874 gtttctggagttgaaaatagg-aggtaggactaaaacagcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagaggcaagacaattttcg 9393777  T
Q  147 aaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
      || |||||||||| ||| ||  |||| |||||||||    
T  9393776 tgagctgatcaaaatgcgaggatcaaaagtgtaattaa 9393739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 33880794 - 33880623
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacga 111  Q
    |||||| ||| ||||||||||  | |||| |||||||||||| || || ||||| || | ||||||||||| ||||||||| || ||| ||||||||||     
T  33880794 cataggcggtaggactaaaacaacaatttatgtgcgtttctgaaggtgaaaataagggg-taggactaaaagtgcaaaaaatatgataatttagggacgg 33880696  T
Q  112 ttttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||| |||||||| ||||||| || ||  |||| |  || || ||||||||||| ||| ||||||| ||||||    
T  33880695 ttttgttcgatttgaaagaggcagaacaatttttgtgagctggtcaaaatacgaggaccaaaaatgcaattaa 33880623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 35579058 - 35578902
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    |||||| || ||||| | |||||||||||||||| ||||| |||  ||||| |||||||||||||||||| ||||||||  |||| |||| ||||||||     
T  35579058 ctaaaaatgtcatttctctgcgtttctggagttgaaaata-ggatgtaggattaaaactgcaaaaaacatgatagttta-tgacggttttgttcgatttg 35578961  T
Q  126 aaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||| || |||||| |||| |  || || ||||||| | ||||| |||| |||||||||    
T  35578960 aaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 39136845 - 39136742
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||  | || ||||||||||| |||| ||| ||| ||||||||||||||||||| ||||||||     
T  39136845 ctaaaactgtcatttttgttagtttctggagttgaaaattag-agttaggactaaaagtgcataaa-catgatagtttagggacgattttgttcgatttg 39136748  T
Q  126 aaagag 131  Q
    ||||||    
T  39136747 aaagag 39136742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 45815470 - 45815557
Alignment:
Q  45 tgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-cat-atagtttagggacgattttattcgatttaaaagagg 132  Q
    |||||||||||||||| ||||| | || ||| ||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||    
T  45815470 tgcgtttctggagttgaaaataag-aggtagaactaaaactgcaaaaaaacatgatagtttagg-acgattttgttcgatttaaaagagg 45815557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 8140069 - 8140001
Alignment:
Q  197 ccttattatttgaggggtttacgcatagatatgatgcgttcaatttctcttttctcatctcttatttta 265  Q
    |||||||  ||||||||||| | |||| ||||  |||||||| ||||||||||||||||||||||||||    
T  8140069 ccttatttgttgaggggtttccacataaatattgtgcgttcagtttctcttttctcatctcttatttta 8140001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 184
Target Start/End: Complemental strand, 49064171 - 49064037
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcga 147  Q
    |||||||||||| ||||||| || ||||||||||| |||||||| ||| |||||||| ||| |||||| ||| |||| ||||||| |  ||| ||||||     
T  49064171 tttctggagttgaaaatagg-agttaggactaaaagtgcaaaaa-catgatagtttatggaagattttgttctatttgaaagaggcaataccattttcgt 49064074  T
Q  148 aagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
     || || ||||||||||| ||| |||| |||||||||    
T  49064073 gagctggtcaaaatacgaggaccaaaagtgtaattaa 49064037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 39136991 - 39137076
Alignment:
Q  99 agtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||| |||||||||||||||| |||||| ||||||  ||  | ||||||||||| ||  |||| |||||||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaa 39137076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 5184544 - 5184488
Alignment:
Q  37 catttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    ||||| ||||| ||| |||||||||||||||||||||| |||||||| || ||||||    
T  5184544 catttctgtgcatttttggagttggaaatagggagataagactaaaattgtaaaaaa 5184488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 45815454 - 45815383
Alignment:
Q  76 gactaaaactgcaaaaaa-cat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttc 145  Q
    |||||||||||||||||| ||| |||||||||||||| |||| |||||||| ||||||| | |||| |||||    
T  45815454 gactaaaactgcaaaaaaacatgatagtttagggacggttttgttcgatttgaaagaggcatgaccattttc 45815383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 35579256 - 35579376
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||| ||| || |||||||||  ||||   ||||||| | |||||| ||||||| || || ||||||||||||||||||||| |||||||| ||||    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagttta-ggac 35579353  T
Q  110 gattttattcgatttaaaagagg 132  Q
    | |||| || ||||| |||||||    
T  35579354 ggttttgtttgatttgaaagagg 35579376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 18535321 - 18535377
Alignment:
Q  80 aaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtag 135  Q
    |||| ||||||||| || |||||||||||||| |||| |||||||| ||||||||||    
T  18535321 aaaagtgcaaaaaatattatagtttagggacggttttgttcgatttgaaagaggtag 18535377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 5e-60; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 11540008 - 11540181
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  11540008 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaacatatagtttatggacg 11540107  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||||||||||| ||||||  ||||| ||||||| ||||||| |||| | |||||||    
T  11540108 attttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaa 11540181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 42192416 - 42192243
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42192416 agcatatgtggttggactaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 42192317  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||||||||||| ||||||  ||||| |||||||  || ||| |||| |||||||||    
T  42192316 attttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42192243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 42192612 - 42192786
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||||||||    
T  42192612 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatctagtttagggac 42192711  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| ||||||||||||||||||||||| ||||||  ||||| ||||||| ||| ||| |||| |||||||||    
T  42192712 gattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 42192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 20128107 - 20128280
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  20128107 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacg 20128206  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| || ||||||||||||||||||||  |||||  ||||| | ||||| | | ||| |||| |||||||||    
T  20128207 attttgtttgatttaaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaa 20128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 4355929 - 4355758
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4355929 cataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 4355830  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||| |||||||||||||||||| ||||  |||||  ||| | ||||||| | | ||| |||| |||||||||    
T  4355829 tttgttcgatttaaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaa 4355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 63133 - 62983
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  63133 agcataggtggttggactaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 63034  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||| ||| |||||||||| ||||||  ||||| |||||||    
T  63033 attttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaat 62983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 4809055 - 4808882
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  4809055 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactacaaaaaacatatagtttatggacg 4808956  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||||||||| |  |||||  ||||| ||||||| | |  || ||||||||||||||    
T  4808955 attttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaactaaaaatgtaattaa 4808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 38008321 - 38008471
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38008321 agcataggtggttggactaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 38008420  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  38008421 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 38008471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 649702 - 649530
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  649702 agcataggtggctggactaaaac-gtcatttatgtgcgtttctggagttggaaatagggagacagaactaaaactgcaaaaaacatatagtttagggacg 649604  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||||||||  ||||| |||||| |||| || | | ||| |||| |||||||||    
T  649603 attttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaa 649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 16175719 - 16175848
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  16175719 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 16175818  T
Q  110 gattttattcgatttaaaagaggtaggacc 139  Q
    |||||| |||||||||||||||||| ||||    
T  16175819 gattttgttcgatttaaaagaggtatgacc 16175848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 33920788 - 33920615
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||| ||||||||||||| ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33920788 agcataggtggctggactaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaatcatatagtttagggacg 33920689  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| || |  |||||  ||||| ||||||| | | ||| ||||||||||||||    
T  33920688 attttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 43216079 - 43216228
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  43216079 agcataggtggttggactaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaatatatagtttagggacg 43216178  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaa 160  Q
    ||||| |||||||||||||||||||||||  |||||  ||||| ||||||    
T  43216179 attttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaa 43216228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 43160184 - 43160012
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggacga 111  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  43160184 cataggtggttagactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacga 43160085  T
Q  112 ttttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||| |||||||||||||||||| ||||  |||||  ||||||||||||| | | ||| ||||||||||||||    
T  43160084 ttttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 11539814 - 11539663
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  11539814 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 11539715  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| |  ||||||| ||||||  ||||| |||||||    
T  11539714 gattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaat 11539663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 38008127 - 38007953
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    |||||||| ||||||| |||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  38008127 agcataggcggttggattaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggac 38008028  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  38008027 gattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 38007953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 16953304 - 16953477
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  16953304 agcatagttggttggactaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacatatactttagggaca 16953403  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
     |||| |||||||||||||||||||||||  ||||   ||||| ||||||| | | ||| |||| |||||||||    
T  16953404 tttttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaa 16953477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 13399590 - 13399470
Alignment:
Q  19 tggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttatt 118  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13399590 tggttagactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgtt 13399491  T
Q  119 cgatttaaaagaggtaggacc 139  Q
    | |||||||||||||| ||||    
T  13399490 ccatttaaaagaggtatgacc 13399470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 44220013 - 44220188
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaataggg--agataggactaaaactgcaaaaaacatatagtttaggga 108  Q
    |||||||||||||||||||||| |  ||||||||| |||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||    
T  44220013 agcataggtggttggactaaaattatcatttttgtacgtttctggagttggaaatagggggagatatgactaaaactacaaaaaacatatagtttaggga 44220112  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||| || ||||||||| ||||| |||| ||||||  ||||| ||||||| ||| |||||||| |||||||||    
T  44220113 cgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaa 44220188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 5560920 - 5561023
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5560920 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 5561019  T
Q  111 attt 114  Q
    ||||    
T  5561020 attt 5561023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 44219820 - 44219670
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||     
T  44219820 agcataggtgattggactaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacatataatttaaggaca 44219721  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| |||||||| | |||| |  |||||||||||||    
T  44219720 attttgttcgatttaaaaaaggtaggatcatttttgtgagttgatcaaaat 44219670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 20127910 - 20127777
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggacgat 112  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  20127910 ataggtggttggactaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgat 20127811  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||| |||||||||||| || ||||||| ||||||    
T  20127810 tttgttcgatttaaaaaagataggaccattttcg 20127777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 63328 - 63507
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc------aaaaaacatatagttta 104  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||      |||||||||||||||||    
T  63328 agcataggtggttggactaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaaaaaaaaacatatagttta 63427  T
Q  105 gggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||||| || |||||||||||| || |||| ||||||  ||||| ||||||||| | ||| |||||| |||||||    
T  63428 gggacgattttgtttgatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaa 63507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 6949625 - 6949454
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggacgat 112  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||    
T  6949625 ataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgat 6949526  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||| |||||||||||| || ||||||| ||||||  ||||  |||||||   | ||| ||||||||||||||    
T  6949525 tttgttcgatttaaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaa 6949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 32418333 - 32418185
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  32418333 agcataggtggttggactaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttagggacg 32418234  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||  ||||||||||||||  |||||  ||||| |||||||    
T  32418233 attttgttcgatt--aaagaggtaggaccaatttcgtgagttggtcaaaat 32418185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 33920981 - 33921132
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||  |||    
T  33920981 agcataggtggttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaaacatttagtttaaagac 33921080  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  33921081 gattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 33921132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 4356126 - 4356276
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||    
T  4356126 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgcaaaaaacatatagtttaaggacg 4356225  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || || |||| || |||  ||||| |||||||    
T  4356226 attttgttcgatttaaaaaagatatgaccattatcgtgagttggtcaaaat 4356276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 15550842 - 15550721
Alignment:
Q  19 tggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggacgattttat 117  Q
    |||||| |||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |    
T  15550842 tggttgaactaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgt 15550743  T
Q  118 tcgatttaaaagaggtaggacc 139  Q
    ||||||||||||||||||||||    
T  15550742 tcgatttaaaagaggtaggacc 15550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 4809249 - 4809384
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4809249 agcataggtggttggactaaaactgtcatttttgtgcttttttgtagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 4809348  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcg 146  Q
    | ||| ||| |||||||| |  ||||||| ||||||    
T  4809349 actttgttcaatttaaaaaacataggaccattttcg 4809384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 43160382 - 43160516
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggacga 111  Q
    ||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  43160382 catagatggttggattaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacga 43160481  T
Q  112 ttttattcgatttaaaagaggtaggaccgttttcg 146  Q
    |||  |||||||||||| || ||||||| ||||||    
T  43160482 tttagttcgatttaaaaaagataggaccattttcg 43160516  T

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Target: chr2; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 13315673 - 13315496
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgttt-ctggagttggaaatagggagataggactaaaactgcaa---aaaacatatagtttagg 106  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |    
T  13315673 agcataggtggttggactaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaaaaaacatatagtttaag 13315574  T
Q  107 gacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||| |||||||||||| || || |||| |||||   ||||| |||||||   | |||||||| |||||||||    
T  13315573 gacgattttgttcgatttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaa 13315496  T

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Target: chr2; HSP #31
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 13399790 - 13399909
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||| |||||||| ||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||     
T  13399790 agcataggtggttggattaaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaatatatagtttaaggaca 13399889  T
Q  111 attttattcgatttaaaaga 130  Q
    ||||| ||||||||||||||    
T  13399890 attttgttcgatttaaaaga 13399909  T

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Target: chr2; HSP #32
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 9330164 - 9330338
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| | || ||||||  ||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  9330164 agcataggtggttggactaaaactgtcatttctatgtgtttctatagttgaaaataggtagataggactaaaactgcaaaaaaacatatagtttggggac 9330263  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||| |||   |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  9330264 gattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 16953113 - 16952961
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaacatatagtttaggga 108  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||| ||  ||||||||||||||||| |||    
T  16953113 agcataggtagttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaagga 16953014  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||| |||||||||||| || || |||  ||||||  ||||| |||||||    
T  16953013 cgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaat 16952961  T

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Target: chr2; HSP #34
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 17061084 - 17060932
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaacatatagtttaggga 108  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||| ||  ||||||||||||||||| |||    
T  17061084 agcataggtagttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaagga 17060985  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||| |||||||||||| || || |||  ||||||  ||||| |||||||    
T  17060984 cgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaat 17060932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 15551044 - 15551162
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    |||||| |||||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| ||||    
T  15551044 agcatatgtggttggactaaaactattatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatataacttaaggac 15551143  T
Q  110 gattttattcgatttaaaa 128  Q
    |||||| ||||||||||||    
T  15551144 gattttgttcgatttaaaa 15551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 32418550 - 32418640
Alignment:
Q  45 tgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtag 135  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  32418550 tgcgtttctagagttggaaatagggagataagattaaaactgcaaaaaatatatagtttaaggacgattttgttcgatttaaaagaggtag 32418640  T

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Target: chr2; HSP #37
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 31797166 - 31797320
Alignment:
Q  29 aaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaa 128  Q
    ||||||| ||||| | ||||||||| |||||| ||||||| || |||||||||||||||||||||||||||||||||||||| |||| |||||||| |||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaatagg-aggtaggactaaaactgcaaaaaacatatagtttagggacggttttgttcgatttgaaa 31797264  T
Q  129 gaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||| | |||| ||||||  || || |||||||  || ||| |||| |||||||||    
T  31797265 gaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaa 31797320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 49 - 184
Target Start/End: Original strand, 6949850 - 6949987
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaaaaca--tatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |  |||||||||||||||||||| ||| |||||||||| ||||||||  |||||    
T  6949850 tttctggagtttgaaatatggagataggactaaaactgcaaaaaaaaaatatagtttagggacgattttgttctatttaaaagatgtaggaccaatttcg 6949949  T
Q  147 aaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
      ||||| ||||||| | | ||| |||| |||||||||    
T  6949950 tgagttggtcaaaatgcaaggaccaaaagtgtaattaa 6949987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 24140064 - 24140217
Alignment:
Q  26 actaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgattta 125  Q
    ||||||| || ||||| |||||||||||||||||||||||||||| |||| |||||||||||||     |||||||||| |||||||||| || ||||||    
T  24140064 actaaaaatgtcatttctgtgcgtttctggagttggaaatagggatatagaactaaaactgcaa-----atatagtttatggacgattttgtttgattta 24140158  T
Q  126 aaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||| |||||||||| ||||||  ||||| |||| || ||| ||  |||| |||||||||    
T  24140159 aaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaa 24140217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 28143400 - 28143572
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||| ||| || ||||||||| ||||| | |||||||||||||||| |||||||  | |||||||||||||||||||| ||| |||||||||||||    
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacg-taggactaaaactgcaaaaa-catgatagtttagggac 28143497  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||| ||||||| |||||| ||||||  || || ||||||| ||| ||| |||| || ||||||    
T  28143498 gattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaa 28143572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 22445816 - 22445734
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    ||||||||||||| ||||||||||| ||||| |||| ||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  22445816 agcataggtggtttgactaaaactgtcatttatgtgtgtttctgaagttgaaaatagggagatagtactaaaactgtaaaaaa 22445734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 43215883 - 43215805
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaa 91  Q
    ||||||||||||||||||||||| ||||| | | ||||| |||||||| ||||||||||||| ||||||||||||||||    
T  43215883 cataggtggttggactaaaactgtcatttctattcgtttttggagttgaaaatagggagatatgactaaaactgcaaaa 43215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 25335977 - 25336143
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaac-atatagtttagggac 109  Q
    |||||||||||||||||||||| || ||||| ||||  ||| || ||||||||||| |        |||||||||||||||||  ||||| |||||||||    
T  25335977 agcataggtggttggactaaaagtgtcatttatgtgaatttttgtagttggaaatatg--------actaaaactgcaaaaaaatatataatttagggac 25336068  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||| ||||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  25336069 gattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 25336143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 9330056 - 9329980
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgca 88  Q
    |||||| ||||||| ||| |||||| ||||| ||||||||||| |||||||||||| |||||||||||||||| ||||    
T  9330056 agcataagtggttg-actgaaactgtcatttctgtgcgtttctagagttggaaataaggagataggactaaaagtgca 9329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 5560161 - 5560077
Alignment:
Q  77 actaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||||||||||||| |||||||||| |||||||||| ||| |||||||| || || |||| ||||||  ||||| |||||||    
T  5560161 actaaaactgcaaaaaatatatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaat 5560077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 14942230 - 14942389
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaacat-atagtttagggacgattttattcgatt 123  Q
    |||||||||| |||| | ||| |||||||||||| ||||| |||  |||||||||||||||  ||||||||| ||| |||| |||| ||||| |||||||    
T  14942230 ctaaaactgcgatttctctgcatttctggagttgaaaata-ggatgtaggactaaaactgcaaaaaaaacatgataatttatggacaattttgttcgatt 14942328  T
Q  124 taaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | ||||||  | |||| ||||||  || || ||||||| ||| ||| |||| |||||||||    
T  14942329 tgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 14942389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 5035972 - 5035904
Alignment:
Q  79 taaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||||||||||||||| || |||||||||||||| |||| |||||||||||| ||  |||||| ||||||    
T  5035972 taaaactgcaaaaaatatgatagtttagggacggttttgttcgatttaaaaaagacaggaccattttcg 5035904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 174
Target Start/End: Original strand, 2190506 - 2190609
Alignment:
Q  73 taggactaaaactgcaaaaaa-cat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgaca 170  Q
    ||||||||||||||||||||| | | ||| ||||||||||||||| |||||||| ||| ||| ||||||  |||||  || || ||||||| |||||||     
T  2190506 taggactaaaactgcaaaaaagcgtgataatttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgacc 2190605  T
Q  171 aaaa 174  Q
    ||||    
T  2190606 aaaa 2190609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 5037132 - 5037202
Alignment:
Q  76 gactaaaactgcaaaaaacatat-agtttagggacgattttattcgatttaaaagaggtaggaccgttttc 145  Q
    ||||||||| |||||| |||| | ||||||||||||||||| ||| |||||||||||| | |||| |||||    
T  5037132 gactaaaacagcaaaagacatgttagtttagggacgattttgttcaatttaaaagaggcatgaccattttc 5037202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 18450991 - 18450925
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| ||||||||||| |||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaa 18450925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 20495301 - 20495219
Alignment:
Q  80 aaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||| ||||||||| || ||||||||||||||||||| || ||||||||||||| | || | ||||||  ||||| |||||||    
T  20495301 aaaagtgcaaaaaatatgatagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaat 20495219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 3e-58; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 25535067 - 25534893
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagttta-gggac 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  25535067 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatataatttaggggac 25534968  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| ||||||||||||||||||||||| |||||   | ||| ||||||| ||| ||| |||| |||||||||    
T  25534967 gattttgttcgatttaaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaa 25534893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 55389783 - 55389609
Alignment:
Q  9 gtagcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaggga 108  Q
    |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  55389783 gtagcataggtggttgaactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaagga 55389684  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaatta 183  Q
    ||||||| |||||||||||| |||||||||| ||||||  ||||| || ||||  || ||| |||| ||||||||    
T  55389683 cgattttgttcgatttaaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 40275464 - 40275636
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  40275464 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttagagacg 40275563  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||||||||  |||||  ||||| |||||||  || ||| |||| |||||||||    
T  40275564 attttgttcgatttaaaagaggtaggacc-atttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 51828133 - 51827960
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51828133 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaacatatagtttagggacg 51828034  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||| |||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  51828033 attttgttcgatttaaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 51827960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 51828716 - 51828542
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  51828716 agcatagatggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttacggac 51828617  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||| ||||  ||||| || ||| ||||||| | | ||| |||| |||||||||    
T  51828616 gattttgttcgatttaaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaa 51828542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 330206 - 330379
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  330206 agcataggtggttggattaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacg 330305  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| || ||||||||| |||||||||| ||||||  ||||| ||||||| ||| ||| |||  |||||||||    
T  330306 attttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaa 330379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 40839022 - 40839195
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| || ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40839022 agcatatgtagttggactaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 40839121  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| |||| ||||||  ||||  |||||||  || ||| |||| |||||||||    
T  40839122 attttgttcgatttaaaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 52236992 - 52236819
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  52236992 agcataggtgattggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacg 52236893  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| |||| ||||||  | ||| ||||||| ||| ||| |||| |||||||||    
T  52236892 attttgttcgatttaaaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaa 52236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 52375701 - 52375874
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| |||||    
T  52375701 agcataagtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaacatatagtttatggacg 52375800  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||| ||||||||||||||||||| ||||||  ||||| ||||||| ||| ||| |||| |||||||||    
T  52375801 attttgttcaatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 52375874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 38535667 - 38535815
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38535667 catatgtggttggactaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 38535766  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||||||||||||||| | ||||   ||||| |||||| |||||||    
T  38535767 tttattcgatttaaaagagatcggactaatttcgtaagttggtcaaaat 38535815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 52237189 - 52237360
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||| |||||| ||||||||||| ||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52237189 catatgtggtttgactaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacatataatttagggacgat 52237288  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||| ||||||||||||||||||||||| ||||||  ||||| |||||||  || ||| |||| |||||||||    
T  52237289 tttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 52237360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 40838825 - 40838655
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgatt 113  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  40838825 ataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttatggacgatt 40838726  T
Q  114 ttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    || || ||||||||||||||| |||| ||||||  ||||| ||||||| ||| ||  |||| |||||||||    
T  40838725 ttgtttgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaa 40838655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 49720547 - 49720397
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  49720547 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaacgtatactttagggacg 49720448  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||||||||||||||  |||||  ||||| |||||||    
T  49720447 attttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaat 49720397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 49951916 - 49952089
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||  ||||    
T  49951916 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatgtagtttaatgacg 49952015  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| ||||  |||||  ||||| ||||||| | | ||| ||||||||||||||    
T  49952016 attttgttcgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 49952089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 51828910 - 51829083
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51828910 agcataggtggttggactaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 51829009  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| || || |||||| || || |||| ||||||  ||||||||||||||  ||||| |||| |||||||||    
T  51829010 attttgtttgaattaaaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaa 51829083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 47431873 - 47431722
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||  |||    
T  47431873 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaacatatagtttaaagac 47431774  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||||||||| |||| ||||||  ||||| |||||||    
T  47431773 gattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaat 47431722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 51473225 - 51473376
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  51473225 agcataggtggttggactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 51473324  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  51473325 gattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 51473376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 46013598 - 46013448
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  46013598 agcataggtggttggactaaaaccgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatactttagggacg 46013499  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||||||||| ||||  |||||  ||||| |||||||    
T  46013498 attttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaat 46013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 32730565 - 32730392
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  32730565 agcataggtgattgaactaaaactgtcatttatgtgcgtttctagagttggaaatagggagatacgattaaaactgcaaaaaacatatagtttagggacg 32730466  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||| |||||||||||||||||||  |||| | ||||| ||||||| | | ||| |||| |||||||||    
T  32730465 attttgttcaatttaaaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaa 32730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 55389967 - 55390140
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  55389967 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaaacatatagtttagtgacg 55390066  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| || ||||||||| |||||||||| ||||||  | ||| | ||||| ||| ||| |||| |||||||||    
T  55390067 attttgtttgatttaaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaa 55390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 40275271 - 40275096
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa--aaaacatatagtttaggga 108  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||  |||||||| ||||||||||    
T  40275271 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttaggga 40275172  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | ||||| ||||||||||||||||||||||| ||||||  ||||| |||||||  || ||| |||| |||||||||    
T  40275171 caattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 51473029 - 51472905
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  51473029 cataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatactttagggacaat 51472930  T
Q  113 tttattcgatttaaaagaggtagga 137  Q
    ||| || ||||||||||||||||||    
T  51472929 tttgtttgatttaaaagaggtagga 51472905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 46013792 - 46013943
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  46013792 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 46013891  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || ||| ||| |||| |  ||||| |||||||    
T  46013892 gattttgttcgatttaaaaaagatagaaccatttttgggagttggtcaaaat 46013943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 32730759 - 32730893
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  32730759 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaaacatatagtttaaggacg 32730858  T
Q  111 attttattcgatttaaaagaggtaggaccgttttc 145  Q
    ||||| ||| |||||||| || ||||||| |||||    
T  32730859 attttgttcaatttaaaaaagataggaccattttc 32730893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 43678471 - 43678321
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  43678471 agcataggtggttggactaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacg 43678372  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || || |||| | ||||  ||||| |||||||    
T  43678371 attttgttcgatttaaaaaagatatgaccatgttcgtgagttggtcaaaat 43678321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 49951722 - 49951572
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| ||||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  49951722 agcatatgtggttggactaaaactgttatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacg 49951623  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  49951622 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 49951572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 34105018 - 34105170
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaacatatagtttaggga 108  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| |||||| |||||||||||||  |||||||||||||||||||||    
T  34105018 agcataggtggttggactaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacatatagtttaggga 34105117  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||| |||||||||||||||| ||||||   |||| |||||| |||||||    
T  34105118 cgattttgttcgatttaaaagagggaggaccaacttcgtaagttggtcaaaat 34105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 50662782 - 50662899
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  50662782 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgcaaaaaacatatagtttaaggacg 50662881  T
Q  111 attttattcgatttaaaa 128  Q
    ||||| ||||||||||||    
T  50662882 attttgttcgatttaaaa 50662899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 41998406 - 41998255
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  41998406 agcataggtggttggactaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttaaggac 41998307  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  41998306 gattttgttcgatttaaaaaagataggaccattttcgcgagttggtcaaaat 41998255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 52375503 - 52375368
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||| ||||||||||| ||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52375503 agcatatgtggttagactaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaacatatagtttagggacg 52375404  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||||| ||| |||||||||||||| |||| ||||||    
T  52375403 attttgttcaatttaaaagaggtatgaccattttcg 52375368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 43678657 - 43678827
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgatt 113  Q
    ||||||||||| |||||||||| ||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||    
T  43678657 ataggtggttgaactaaaactgtcatttatgtgcgtttctagagttggaaataggaagatatgactgaaactgcaaaaaacatatagtttatggacgatt 43678756  T
Q  114 ttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    || ||||||||||||||||| |||||   ||||  ||||||||||||| | | ||| |||| |||||||||    
T  43678757 ttgttcgatttaaaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 43678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 44676842 - 44676992
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  44676842 agcataggtggttagactaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaacatatagtttaaggacg 44676941  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || || |||| ||||||  ||||| |||||||    
T  44676942 attttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaat 44676992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 2044445 - 2044313
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||||||||||||||||||||||  |||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||    
T  2044445 cataggtggttggactaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaactccaaaaaacatataatttatggacgat 2044346  T
Q  113 tttattcgatttaaaagaggtaggaccgttttc 145  Q
    ||| |||||||||||||||||| |||| |||||    
T  2044345 tttgttcgatttaaaagaggtatgaccattttc 2044313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 44676636 - 44676525
Alignment:
Q  23 tggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgat 122  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44676636 tggactaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaacatatagtttagggacggttttgttcgat 44676537  T
Q  123 ttaaaagaggta 134  Q
    ||||||||||||    
T  44676536 ttaaaagaggta 44676525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 14654561 - 14654732
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||    
T  14654561 agcatagatggttgaactaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaac--atagtttacggacg 14654658  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||||  ||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  14654659 attttgttcgatttaaaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 14654732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 38535477 - 38535351
Alignment:
Q  19 tggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttatt 118  Q
    |||||| |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||    
T  38535477 tggttgaactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaacatatagtttaaggacgattttgtt 38535378  T
Q  119 cgatttaaaagaggtaggaccgttttc 145  Q
    |||||||||| || ||||||| |||||    
T  38535377 cgatttaaaaaagataggaccattttc 38535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 2051475 - 2051321
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa----aaaacatatagtttagg 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||    ||||||||||||||| |    
T  2051475 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaaaaaaacatatagtttaag 2051376  T
Q  107 gacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
     |||||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  2051375 aacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 2051321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 22370758 - 22370599
Alignment:
Q  26 actaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggacgattttattcgattt 124  Q
    ||||||||||  |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||| || | |||    
T  22370758 actaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttt 22370659  T
Q  125 aaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||| |||||||||| ||||||  ||||| ||||||| ||| ||| |||| |||||||||    
T  22370658 aaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 30513898 - 30513725
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgca-aaaaacatatagtttagggac 109  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||| |||| |||||| ||||||| ||||||||||||| ||||||||||||||||  |||    
T  30513898 agcataggtggctggactaaaactgtcatttctgtgcgtttctgaagttcgaaatatggagatatgactaaaactgcagaaaaacatatagttta-agac 30513800  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||||||||||||| || ||||||| ||||||  ||||  ||||||| | | ||| ||||||||||||||    
T  30513799 gattttattcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaa 30513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 34104813 - 34104664
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||  ||||    
T  34104813 agcataggtggttggactaaaaatgtcatttttgtgcgtttctggagctggaaatagg-agatatgactaaaactgcaaaaaacatatagtttaatgacg 34104715  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| ||| |||||||| || ||| ||| ||||||  ||||| |||||||    
T  34104714 attttgttcaatttaaaaaagatagaaccattttcgtgagttggtcaaaat 34104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 51828327 - 51828445
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  51828327 agcataggtagttggactaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 51828426  T
Q  110 gattttattcgatttaaaa 128  Q
     ||||| ||||||||||||    
T  51828427 aattttgttcgatttaaaa 51828445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 43222566 - 43222393
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaa-tagggagataggactaaaactgcaaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| ||||| | ||||| ||||| |||||||||||||||||||||||||    
T  43222566 agcataggtggttggactaaaactgtcatttttgtacgtttctggagttgaaaaataggggg-taggattaaaaatgcaaaaaacatatagtttagggac 43222468  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||  |  ||  ||||||  ||||| |||||||  |||||| ||||| ||||||||    
T  43222467 gattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaa 43222393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 49 - 184
Target Start/End: Complemental strand, 16689496 - 16689361
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaa 148  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||  |||||      
T  16689496 tttctggagtcggaaatagggtgataggactaaaactgcaaaaaacatatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtg 16689397  T
Q  149 agttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||| | | ||| |||| |||||||||    
T  16689396 agttggtcaaaatgctaggaccaaaactgtaattaa 16689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 49 - 184
Target Start/End: Original strand, 49720769 - 49720904
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaa 148  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| || || |||| ||||||      
T  49720769 tttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtg 49720868  T
Q  149 agttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||  | ||| |||| |||||||||    
T  49720869 agttggtcaaaatagtaggaccaaaagtgtaattaa 49720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 329980 - 329872
Alignment:
Q  53 tggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagtt 152  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||| ||||||  ||||    
T  329980 tggagttggaaacagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtgagtt 329881  T
Q  153 gatcaaaat 161  Q
    | |||||||    
T  329880 ggtcaaaat 329872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 43222765 - 43222895
Alignment:
Q  17 ggtggttggactaaaactgccatttttgtgcgtttctggagttg-gaaatagggagataggactaaaactgc-aaaaaacatatagtttagggacgattt 114  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |||||||| | | ||||||||||||| |||||||||| ||||||||||||||||    
T  43222765 ggtggttggactaaaactgtcatttttgtgcgtttctggagttgaaaaataggg-ggtgggactaaaactgcaaaaaaacataaagtttagggacgattt 43222863  T
Q  115 tattcgatttaaaagaggtaggaccgttttcg 146  Q
    | |||||||||||||||| | |||| ||||||    
T  43222864 tgttcgatttaaaagaggcatgaccattttcg 43222895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 41998600 - 41998771
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggac 109  Q
    |||||||||||||| |||||| ||  |||| | || ||||||| |||||| |||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  41998600 agcataggtggttgaactaaatctatcattat-gtacgtttctagagttgaaaatagggag-taggactaaaactgcaaaaaaacatatagtt-agggac 41998696  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||||||||  ||||| |||||| ||||||| | | ||| |||| |||||||||    
T  41998697 gattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 41998771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 16701168 - 16701335
Alignment:
Q  20 ggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttagggacgatttta 116  Q
    ||||||||||||||||  ||||   ||||||| |||||||||||||||||||||| ||||||||||||   ||||||||||||||||| ||||||||||     
T  16701168 ggttggactaaaactgtaatttcgatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaaaacatatagtttaaggacgattttg 16701267  T
Q  117 ttcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||| || || |||| ||||||  ||||| |||||||   | ||| ||||||||||||||    
T  16701268 ttcgaattaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 16701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 39010250 - 39010078
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||  ||||| ||||| ||| |||||||| ||||||||||||  |||||||||||||||||||||| |||||| | ||     
T  39010250 agcatatgtggttggactaaaactatcatttatgtgc-tttatggagttgaaaatagggagatgtgactaaaactgcaaaaaacatacagtttaagaaca 39010152  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| || |  ||| |  ||||| ||||||| | | ||| ||||||||||||||    
T  39010151 attttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 39010078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 14654361 - 14654225
Alignment:
Q  17 ggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgatttta 116  Q
    ||||||||||||||||||| ||||| |||||||||  |||||||||||||||        ||||||| ||||||||||||||||||||  |||||||||     
T  14654361 ggtggttggactaaaactgtcatttctgtgcgtttacggagttggaaatagg--------actaaaaatgcaaaaaacatatagtttaaagacgattttg 14654270  T
Q  117 ttcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  14654269 ttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 14654225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 36701482 - 36701639
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    ||||||||||||||| | || ||||||||||||| ||||||| || || ||||||||||||||||||||| |||||||||||| |||||| ||||||||     
T  36701482 ctaaaactgccatttctatgtgtttctggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagtttagggatgattttgttcgatttg 36701580  T
Q  126 aaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||  | |||| ||||||  || || ||||||| ||| ||| |||| |||||||||    
T  36701581 aaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 36701639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 50900914 - 50901070
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaa 126  Q
    |||||||||| |||| | ||||||| |||||||| ||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||||||      
T  50900914 ctaaaactgcaatttctttgcgtttatggagttgaaaatagg-aggtaggacaaaaactgcaaaaaacatatagtttagggacggttttgttcgatttgt 50901012  T
Q  127 aagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| ||| || |||| |  || || ||||||| ||| ||| |||| |||||||||    
T  50901013 aagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 50901070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 55192293 - 55192173
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||| ||| || ||||||||| ||||| | |||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||| |||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactacaaaaaacatatagtttatggacg 55192195  T
Q  111 attttattcgatttaaaagagg 132  Q
     |||| || ||||| |||||||    
T  55192194 gttttgtttgatttgaaagagg 55192173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 27199878 - 27199705
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttagggac 109  Q
    |||||||| ||| || |||||||||  |||| | ||||||||| |||||| |||||||  | ||| ||||||||||||||||| |||||||||||| |||    
T  27199878 agcatagggggtaggtctaaaactgatatttatctgcgtttctagagttgaaaataggatg-tagcactaaaactgcaaaaaaacatatagtttagtgac 27199780  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | |||| |||||||| ||||||| | |||| ||||||  || || ||||||| ||| ||| ||||||||||||||    
T  27199779 ggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaa 27199705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 37075864 - 37075689
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa---catatagtttaggg 107  Q
    |||||||| ||| || ||||||| | ||||| | |||||||||||||||| ||||| | || |||||||||||||||||||||   ||||||||||||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaaaaaacatatagtttaggg 37075766  T
Q  108 acgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||  ||| || ||||| ||||||| |||||| ||||||  ||||| ||||||| ||  ||| |||| |||||||||    
T  37075765 acgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaa 37075689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 49407972 - 49407799
Alignment:
Q  10 tagcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggac 109  Q
    ||||||||| ||| || |||||| || ||||| | ||||||| |||||||| ||||||| || || ||||||||||| | |||||||| |||||||||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggagttgaaaatagg-aggtatgactaaaactgtacaaaacataaagtttagggac 49407874  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | |||| ||| |||| ||||||| | |||| ||||||  || || ||||||| ||| ||| |||| |||||||||    
T  49407873 ggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 49407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 8874072 - 8874191
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaa--aacatatagtttagggacgattttattcgattt 124  Q
    ||||||||| ||||| | |||||||||||||||| ||||||  || ||| |||||||||||||||  ||||||||||||||||| | |||| ||||||||    
T  8874072 ctaaaactgtcatttct-tgcgtttctggagttgaaaataga-aggtagaactaaaactgcaaaaaaaacatatagtttagggaaggttttgttcgattt 8874169  T
Q  125 aaaagaggtaggaccgttttcg 146  Q
    |||||| | |||||| ||||||    
T  8874170 aaaagaagcaggaccattttcg 8874191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 27200078 - 27200234
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    ||||| ||| ||||| | |||||||||||||||| ||||| |||| || ||||||||||||||||||||| |||||||| ||||| | || ||||||||     
T  27200078 ctaaacctgtcatttctctgcgtttctggagttgaaaata-ggaggtatgactaaaactgcaaaaaacatgatagttta-ggacggtattgttcgatttg 27200175  T
Q  126 aaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||| || ||| ||||||  || || ||||||| | | ||| |||| |||||||||    
T  27200176 aaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 27200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 37076060 - 37076217
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    ||||||||||||||| | | ||||||| |||||  |||   | || || |||||||| || ||||||||| |||||||||| |||||||| ||||||||     
T  37076060 ctaaaactgccatttctctacgtttctagagttaaaaaatagaaggtaagactaaaaatgtaaaaaacatgatagtttagg-acgattttgttcgatttg 37076158  T
Q  126 aaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||  ||||| ||||||  || |||||||||| ||| ||| ||||||||||||||    
T  37076159 aaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaa 37076217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 36701268 - 36701109
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagg-gagataggactaaaactgcaaaaaa--cat-atagtttagggacgattttattcgat 122  Q
    |||||| || ||||| | |||||||||||||||| ||||||| | ||||  |||||||| | ||||||  ||| |||||||| |||||||||| ||||||    
T  36701268 ctaaaattgtcatttatctgcgtttctggagttgaaaataggagggata--actaaaaccgtaaaaaaaacatgatagtttatggacgattttgttcgat 36701171  T
Q  123 ttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    || ||||||| | || | ||||||  ||||||||||||| ||| ||| |||| |||||||||    
T  36701170 ttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaa 36701109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 37847206 - 37847323
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    |||||| || ||||| | ||| |||||| ||||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||  ||| ||||||||     
T  37847206 ctaaaattgtcatttctctgcatttctgaagttgaaaatagg-agataggactaaaactgc-aaaaacatgatagtttagggacggctttgttcgatttg 37847303  T
Q  126 aaagaggtaggaccgttttc 145  Q
    ||||||| | |||| |||||    
T  37847304 aaagaggcaagaccattttc 37847323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 49408169 - 49408232
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    ||||||||||||||| | |||||||||||||||| ||||   ||| |||||||||||||||||||||    
T  49408169 ctaaaactgccatttctttgcgtttctggagttgaaaat---gaggtaggactaaaactgcaaaaaa 49408232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 50900692 - 50900558
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacat-atagtttagggacgattttattcgattt 124  Q
    ||||||||| ||||| | |  |||||| |||||| ||||||  || ||||||||||||||| ||||||||| |||||||| ||||| |||| ||||||||    
T  50900692 ctaaaactgtcatttctctatgtttctagagttgaaaataga-aggtaggactaaaactgcgaaaaaacatgatagttta-ggacggttttgttcgattt 50900595  T
Q  125 aaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
     |||||| ||||||| ||||||  || ||||||||||    
T  50900594 gaaagagttaggaccattttcgtgagctgatcaaaat 50900558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 8873850 - 8873694
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-cat-atagtttagggacgattttattcgattt 124  Q
    ||||||||| ||||| | |||||||||| ||||| ||||||| || || |||||||||||||||||| ||| |||| ||| | ||| |||| ||||||||    
T  8873850 ctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-aggtaagactaaaactgcaaaaaaacatgataggttatg-acggttttgttcgattt 8873753  T
Q  125 aaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||  | |||| |||||| ||  |||||||||| ||| |||  |||||||||||||    
T  8873752 aaaagagacatgaccattttcgtaaactgatcaaaatgcgaggac-caaaatgtaattaa 8873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 2323538 - 2323434
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    ||||||||| ||||| |  | ||||||||||||| ||||||| || ||||||||||| |||||||||||| |||||||| ||| | |||| ||||||||     
T  2323538 ctaaaactgtcatttatccgtgtttctggagttgaaaatagg-aggtaggactaaaattgcaaaaaacatgatagttta-ggatggttttgttcgatttg 2323441  T
Q  126 aaagagg 132  Q
    |||||||    
T  2323440 aaagagg 2323434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 12141081 - 12140978
Alignment:
Q  43 tgtgcgtttctggagttggaaatagggagataggactaaaactg-caaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccg 140  Q
    ||||||||| ||||| || |||||||| | ||||||||||||||  ||||||||| |||||||||||||| |||| |||||||| ||||||| | ||||     
T  12141081 tgtgcgtttttggaggtgaaaataggggg-taggactaaaactgaaaaaaaacatgatagtttagggacg-ttttcttcgatttgaaagaggcatgacca 12140984  T
Q  141 ttttcg 146  Q
    ||||||    
T  12140983 ttttcg 12140978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 12141128 - 12141189
Alignment:
Q  79 taaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggacc 139  Q
    |||||||||||||||||| ||||||||| || | |||| |||||||| ||||||||||||||    
T  12141128 taaaactgcaaaaaacatgatagtttagagatggttttgttcgatttgaaagaggtaggacc 12141189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 33412609 - 33412697
Alignment:
Q  96 tatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||||||||||||||| |||||||  ||||||  || ||| ||||||  || |||||||||| ||| ||| |||| |||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaa 33412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 5137365 - 5137427
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa 89  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||||||||||||||| |||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaa 5137427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 28254796 - 28254969
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  28254796 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaattatatagtttagggacg 28254895  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  28254896 attttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 28254969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 41260631 - 41260804
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41260631 agcataagtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 41260730  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| || |  |||||  ||||||||||||| | ||||| |||| | |||||||    
T  41260731 attttgttcgatttaaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaa 41260804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 35427182 - 35427355
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  35427182 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaatatataatttagggacg 35427281  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||| |||||||||||||| ||| ||||||  ||||| ||||||| ||| ||| |||| |||||||||    
T  35427282 attttgttcggtttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 35427355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 599704 - 599535
Alignment:
Q  15 taggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattt 114  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  599704 taggtggctggactaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaacatataatttagggatgattt 599605  T
Q  115 tattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | |||||||||||||||||| ||||  |||||  ||||| ||||||| | | ||| ||||||||||||||    
T  599604 tgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 599535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 9796902 - 9796729
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |    
T  9796902 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttatggatg 9796803  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||||||||  ||| |  ||||| ||||||| | | ||| |||| |||||||||    
T  9796802 attttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9796729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 18049961 - 18050134
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||| ||||||||  |||| |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  18049961 agcataggtggttggagtaaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaacatatagtttagggacg 18050060  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| ||||  |||||  ||||| ||||||| | | ||| ||||||||||||||    
T  18050061 attttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 18428131 - 18428282
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  18428131 agcatagatggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaaaacatatagtttaaggac 18428230  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  18428231 gattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 18428282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 5731182 - 5731355
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||    
T  5731182 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgcaaaaaacatatagtttatggacg 5731281  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||| || |||||| |||  ||||   ||||| ||||||| | |||||||||| | |||||||    
T  5731282 attttgttcgatttataaaaggtagaaccaatttcctgagttggtcaaaatgcaatgacaaaaagtataattaa 5731355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 7910986 - 7911159
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||| |||||| | |||| |||||||||||||||||| ||||||||||||||||    
T  7910986 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaatatatagtttagggacg 7911085  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||||||| ||| ||||||  ||||| ||||||| ||| ||  |||| |||||||||    
T  7911086 attttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaa 7911159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 42035948 - 42035775
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| | |||||||||| |||||    
T  42035948 agcatatgtggttggactaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatatatatagtttatggacg 42035849  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||||||| ||| ||||||  ||||| |||||||  || ||| |||| |||||||||    
T  42035848 attttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42035775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 34799453 - 34799581
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||| |||||||||  ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  34799453 agcataggtggttgaactaaaactatcatttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaacatatagtttagggaca 34799552  T
Q  111 attttattcgatttaaaagaggtaggacc 139  Q
    ||||| |||||||||||||||||||||||    
T  34799553 attttgttcgatttaaaagaggtaggacc 34799581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 18049767 - 18049616
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  18049767 agcataggtggttggattaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 18049668  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || ||| ||| ||||||  ||||| |||||||    
T  18049667 gattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaat 18049616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 28254602 - 28254451
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    |||||||||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  28254602 agcataggtggttggactaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 28254503  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| ||| |||||||| || ||||||| ||||||  |||||||||||||    
T  28254502 gattttgttcaatttaaaatagataggaccattttcgtgagttgatcaaaat 28254451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 16578285 - 16578111
Alignment:
Q  11 agcataggtggttggactaaaactg-ccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggac 109  Q
    ||||||| |||||||||||||||||    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  16578285 agcatagatggttggactaaaactgtttttttttttgcgtttctggagttggaaatagggagataggaccaaaactgcaaaaaacatataatttagggac 16578186  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||||||||  |||||  ||||| ||||||| | |  || ||||||||||||||    
T  16578185 gattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaa 16578111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 26252982 - 26252865
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgatt 113  Q
    |||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26252982 ataggtggttggactaaatctgtcatttctgagcgtttctggagttggaaatagggagataggactaaaactgcacaaaacatatagtttagggacgatt 26252883  T
Q  114 ttattcgatttaaaagag 131  Q
    || |||||||||||||||    
T  26252882 ttgttcgatttaaaagag 26252865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 35694046 - 35693894
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa--acatatagtttaggga 108  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||| |||    
T  35694046 agcaaaggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaaatatatatagtttatgga 35693947  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||||||||||||||||||||||| | | |||||| || ||| |||||||    
T  35693946 cgattttattcgatttaaaagaggtagaatcattttcgtaaattggtcaaaat 35693894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 12 - 184
Target Start/End: Original strand, 6115481 - 6115654
Alignment:
Q  12 gcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaa-aacatatagtttagggacg 110  Q
    ||||| |||||||||||||||||| ||||| ||||||||||| |||||| ||||| |||||||| ||||||||| ||||| |||||||||||||||||||    
T  6115481 gcataagtggttggactaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaacatatagtttagggacg 6115580  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||||||||  |||||  ||||| ||||||||| | ||| |||| | |||||||    
T  6115581 attttgttcgatttaaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaa 6115654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 42036144 - 42036292
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggacgat 112  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |   ||| |||||||||||| |||||||||||||||||||||||||    
T  42036144 ataggtggttggactaaaactgtcatttttgtgcatttctggagttggaaatatgagaatacgactaaaactgcaaaaaaacatatagtttagggacgat 42036243  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||| |||||||||||||||||| || | |||||| |||||| |||||||    
T  42036244 tttgttcgatttaaaagaggtaagatcattttcgtaagttggtcaaaat 42036292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 15255987 - 15255856
Alignment:
Q  53 tggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagtt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||  ||||    
T  15255987 tggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagtt 15255888  T
Q  153 gatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | ||||||| | | ||| |||| |||||||||    
T  15255887 ggtcaaaatgcaaggaccaaaagtgtaattaa 15255856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 34799256 - 34799082
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    |||||||||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  34799256 agcataggtggttggactaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 34799157  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    || ||| |||||||||||| |  ||||||| |||||   ||||| |||||||   ||||| |||| |||||||||    
T  34799156 gactttgttcgatttaaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaa 34799082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 599867 - 600018
Alignment:
Q  10 tagcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggac 109  Q
    ||||||| |||||||||||||||||| ||||| | |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  599867 tagcataagtggttggactaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaaacatatagtttaaggac 599966  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| ||| |||||||| || || |||| ||||||  ||||| |||||||    
T  599967 gattttgttccatttaaaaaagatatgaccattttcgttagttggtcaaaat 600018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 9797096 - 9797247
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||| ||||    
T  9797096 agcataggtggttagactaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaaaacatatagtttaaggac 9797195  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||||| ||||||||| || ||| ||| ||||||  ||||| |||||||    
T  9797196 gattttatttgatttaaaaaagatagaaccattttcgtgagttggtcaaaat 9797247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 16578466 - 16578579
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||  || |    
T  16578466 agcataggtggttggactaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgcaaaaaacatatagtttaatgatg 16578565  T
Q  111 attttattcgattt 124  Q
    ||||| ||||||||    
T  16578566 attttgttcgattt 16578579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 15256203 - 15256335
Alignment:
Q  16 aggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttagggacgat 112  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||| ||||||   ||||||||||||||||| |||||||    
T  15256203 aggtggttggactaaaattgtcatttctgtgcgtttctggagttggaaatagggagatatgactagaactgcaaaaaaaaacatatagtttaaggacgat 15256302  T
Q  113 tttattcgatttaaaagaggtaggaccgttttc 145  Q
    ||| |||||||||||| || ||||||| |||||    
T  15256303 tttgttcgatttaaaaaagataggaccattttc 15256335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 7910791 - 7910619
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagata--ggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||| |||||| ||||||||||| ||||| ||||| ||||| ||||| ||||||  ||||||  |||||||| |||||||||||||||| ||||||||||    
T  7910791 catatgtggtttgactaaaactgtcatttctgtgcatttcttgagttagaaataaagagatataggactaaa-ctgcaaaaaacatataatttagggacg 7910693  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||||||  ||| ||||||  |||||||||||||  || ||| ||||||||||||||    
T  7910692 attttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaa 7910619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 35694242 - 35694381
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--------aaaaaacatatagttta 104  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| ||        |||||| ||||||||||    
T  35694242 cataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataagactaaaacagcaaaaaaaaaaaaaaaatatagttta 35694341  T
Q  105 gggacgattttattcgatttaaaagaggtaggaccgtttt 144  Q
     |||||||||| |||||||||||| | |||||||| ||||    
T  35694342 aggacgattttgttcgatttaaaaaatgtaggaccatttt 35694381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 5730979 - 5730843
Alignment:
Q  25 gactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgattt 124  Q
    ||||||||||| ||||| ||| |||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||| |||||||||| || |||||    
T  5730979 gactaaaactgtcatttctgtacgtttctggagttaaaaatagggaggtaggactaaaacagcaaaaaacatatagtttaaggacgattttgtttgattt 5730880  T
Q  125 aaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||| || ||||||  ||||||  ||||| |||||||    
T  5730879 aaaaaagataggactattttcgtgagttggtcaaaat 5730843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 35426989 - 35426885
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||     
T  35426989 agcatatgtggttagactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggagtaaaattgcaaaaaacatatagtttaaggacc 35426890  T
Q  111 atttt 115  Q
    |||||    
T  35426889 atttt 35426885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 41260409 - 41260313
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttc 145  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||| |||||    
T  41260409 tttctagagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttc 41260313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 2208891 - 2208740
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactg-caaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||   |||| ||| |||||||||| ||| ||||||||||||| |||||||| ||  |||||| |||||||||| ||||    
T  2208891 agcataggtggttggactaaaactattatttctgtacgtttctggaattgaaaatagggagatatgactaaaattgtaaaaaaatatatagtttaaggac 2208792  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || ||||||  ||||||  ||||| |||||||    
T  2208791 gattttgttcgatttaaaaaagataggacaattttcgtgagttggtcaaaat 2208740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 35163874 - 35163815
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaataggga 70  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  35163874 agcataggtggttggactaaaactgtcatttctgtgcgtttctcgagttggaaataggga 35163815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 18674256 - 18674206
Alignment:
Q  79 taaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaag 129  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18674256 taaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaag 18674206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 28877260 - 28877432
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||| ||| || |||||| || ||||| | | |||||||||||||  ||||||  || |||||||||||| ||||||||||| |||| ||||||||    
T  28877260 agcataggaggtaggtctaaaattgtcatttatatacgtttctggagttaaaaataga-aggtaggactaaaacagcaaaaaacatgatag-ttagggac 28877357  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
     ||||| ||| |||| |||||||||  ||| ||||||  ||||| ||||||| ||| ||| |||| |||||||||    
T  28877358 aattttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 18805322 - 18805219
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaa 126  Q
    ||||||||| ||||| | || ||||||||||||| | ||||| || |||||||||||| | |||||||||||||||  |||||  |||| ||||||||||    
T  18805322 ctaaaactgtcatttctctgtgtttctggagttgaagatagg-aggtaggactaaaacaggaaaaaacatatagttctgggacagttttgttcgatttaa 18805224  T
Q  127 aagag 131  Q
    |||||    
T  18805223 aagag 18805219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 265
Target Start/End: Original strand, 4799320 - 4799351
Alignment:
Q  234 gttcaatttctcttttctcatctcttatttta 265  Q
    ||||||||||||||||||||||||||||||||    
T  4799320 gttcaatttctcttttctcatctcttatttta 4799351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 10047066 - 10047125
Alignment:
Q  71 gataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaaga 130  Q
    ||||||| |||||||||||||| ||| ||||||||| ||| ||||| ||||||||||||||    
T  10047066 gataggattaaaactgcaaaaa-catgatagtttagagaccattttgttcgatttaaaaga 10047125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 28877002 - 28876958
Alignment:
Q  89 aaaaacat-atagtttagggacgattttattcgatttaaaagagg 132  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||    
T  28877002 aaaaacatgatagtttagggacgattttgttcgatttgaaagagg 28876958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 8e-56; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 46737024 - 46737198
Alignment:
Q  10 tagcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggac 109  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  46737024 tagcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaacatatagtttagggac 46737123  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  46737124 gattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 46737198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 14440004 - 14439831
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14440004 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 14439905  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||  |||||||| ||||| ||||  |||||  ||||| ||||||| | | ||| ||||||||||||||    
T  14439904 attttgtttaatttaaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 12 - 184
Target Start/End: Original strand, 56077695 - 56077867
Alignment:
Q  12 gcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacga 111  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  56077695 gcataggtggttggactaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacga 56077794  T
Q  112 ttttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||| |||||||||||| || || |||| ||||||  ||||| |||||||   | ||| ||||||||||||||    
T  56077795 ttttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 56077867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 28465257 - 28465107
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  28465257 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttaaggacg 28465158  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| ||||||||||||||||||||| |  ||||| |||||| |||||||    
T  28465157 attttgttcgatttaaaagaggtaggatcaatttcgtaagttggtcaaaat 28465107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 34789752 - 34789926
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34789752 agcataggtggttggactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggac 34789851  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
     ||||| |||||||||||||||||||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  34789852 aattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 34789926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 34807293 - 34807119
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  34807293 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggac 34807194  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||| ||||  |||||  ||||||||||||| | | ||| |||| |||||||||    
T  34807193 gattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 34807119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 14440198 - 14440348
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |    
T  14440198 agcataggtggttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttaaggatg 14440297  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| |||||| |||||| |||||||    
T  14440298 attttgttcgatttaaaaaagataggaccattttcgtaagttggtcaaaat 14440348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 28465451 - 28465601
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  28465451 agcataggtggttggactaaaactgctatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacg 28465550  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  28465551 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 28465601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 34789558 - 34789408
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34789558 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 34789459  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  34789458 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 34789408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 54440939 - 54441089
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54440939 agcataggtggttggactaaaactgtcattgacgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 54441038  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  || ||||||||||    
T  54441039 attttgttcgatttaaaaaagataggaccattttcgtgagctgatcaaaat 54441089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 21034606 - 21034780
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||    
T  21034606 agcataggtggttggactaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaaaaaatatagttcagggac 21034705  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| ||||||||||||||| |||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  21034706 gattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 21034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 54440745 - 54440574
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  54440745 agcataggtggttggactaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaaaac--atagtttagggacg 54440648  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  54440647 attttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 54440574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 55677327 - 55677501
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactg-caaaaaacatatagtttagggac 109  Q
    |||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||| |||    
T  55677327 agcataggtgattggactaaaactgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaattgtaaaaaaacatatagtttagagac 55677426  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||||||||  |||||  ||||| ||||||||| | ||| |||| |||||||||    
T  55677427 gattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaa 55677501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 24 - 184
Target Start/End: Complemental strand, 19529033 - 19528872
Alignment:
Q  24 ggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggacgattttattcgat 122  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19529033 ggactaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattcgat 19528934  T
Q  123 ttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||||||||||||  |||||  | ||| ||||||| | | ||| |||| |||||||||    
T  19528933 ttaaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaa 19528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 180
Target Start/End: Complemental strand, 45838723 - 45838554
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||| ||||||  ||||| ||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45838723 agcataggtggttggacaaaaactatcatttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 45838624  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaa 180  Q
    ||||| |||||||||||||||||||||||  || ||  ||||| ||||||||| | ||| |||| |||||    
T  45838623 attttgttcgatttaaaagaggtaggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaa 45838554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 12593393 - 12593566
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  ||||    
T  12593393 agcatatgtggttggactaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaatatatagtttacagacg 12593492  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| ||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  12593493 attttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 12593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 24851835 - 24851962
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    |||||||||||||| |||||||||  ||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  24851835 agcataggtggttgtactaaaactttcatttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaacatatagtttagggac 24851934  T
Q  110 gattttattcgatttaaaagaggtagga 137  Q
    |||||| |||||||||||||||||||||    
T  24851935 gattttgttcgatttaaaagaggtagga 24851962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 12593198 - 12593052
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    ||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  12593198 cataggttgttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaacatatagtttaaggacgat 12593099  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaa 159  Q
    ||| |||||||||||| ||||| |||| ||||||  ||||| |||||    
T  12593098 tttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaa 12593052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 33690001 - 33689832
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgatt 113  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  33690001 ataggtggttggactaacactgtcatttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgca-aaaacatatagtttaaggacgatt 33689903  T
Q  114 ttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    || |||||||||||||||||||||||  ||| |  ||||| ||||||| | | ||| |||| |||||||||    
T  33689902 ttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 33689832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 21034408 - 21034261
Alignment:
Q  15 taggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactg-caaaaaacatatagtttagggacgatt 113  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||    
T  21034408 taggtggttggactaaaactgtcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgtaaaaaaacatatagtttaaggacgatt 21034309  T
Q  114 ttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    || |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  21034308 ttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 21034261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 35193483 - 35193334
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||| ||| || ||||||||| ||||| | |||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaacatatagtttagggacg 35193385  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||| |||||||||||||| ||||||  || ||||||||||    
T  35193384 attttgttcgatttgaaagaggtaggaccattttcgtgagctgatcaaaat 35193334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 45838917 - 45839092
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaggg 107  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||| ||    
T  45838917 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaagg 45839016  T
Q  108 acgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||| |||||||||||| || |||||||  |||||  ||||| ||||||||  | ||| |||| |||||||||    
T  45839017 acgattttgttcgatttaaaaaagataggacc-atttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 34807509 - 34807682
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  34807509 agcatatgtggttggactaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgccaaaaacatatagtttaaggacg 34807608  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||| |||||| || ||| |   ||||||  ||||||||||||||  | ||| |||||| |||||||    
T  34807609 attttgttcgaattaaaaaagatagaataattttcgtgagttgatcaaaataataagaccaaaaatataattaa 34807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 41114335 - 41114183
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa--aaaacatatagtttaggga 108  Q
    |||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||| |||    
T  41114335 agcataggtggttggactaaaattgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaagga 41114236  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    || |||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  41114235 cgtttttgttcgatttaaaaaagataggacccttttcgtgagttggtcaaaat 41114183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 26974460 - 26974324
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactg-caaaaaacatatagtttagggac 109  Q
    ||||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  26974460 agcatagttggttgaactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaacatatagtttaaggac 26974361  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    |||||| |||||||||||| || || |||| ||||||    
T  26974360 gattttgttcgatttaaaaaagatatgaccattttcg 26974324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 6616849 - 6616698
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||| || || ||||||||||||||||| ||||    
T  6616849 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagcaaaaaaacatatagtttaaggac 6616750  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| |  || |||| ||||||  |||||||||||||    
T  6616749 gattttgttcgatttaaaaaaaataagaccattttcgtgagttgatcaaaat 6616698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 41608551 - 41608377
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa---aaaacatatagtttaggg 107  Q
    ||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||| ||||||||||||||||||||||   ||||||||||||||  ||    
T  41608551 agcataggtggttggactaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaaaaaacatatagttt--gg 41608454  T
Q  108 acgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||| |||||||||||||||||| ||||  ||||   ||||||||||||| | | ||| |||| |||||||||    
T  41608453 acgattttgttcgatttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaa 41608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 6617070 - 6617160
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggacc 139  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6617070 tttctggagttggagatagggagataggactaaaactgcaaaaaaaatatagtttagggacgattttattcgatttaaaagaggtaggacc 6617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 16214865 - 16215015
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||||||||| ||||||| |||||| | ||||||||||||||| |||||||||| |||||    
T  16214865 agcataggtggttggactaaaactatcatttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaaatatatagtttaaggacg 16214964  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||||| |||||||| || || || | |||||| ||||||||||||||    
T  16214965 attttattcaatttaaaaaagatatgatcattttcgtaagttgatcaaaat 16215015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 28166180 - 28166007
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||| | |||||||  ||||| ||||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||     
T  28166180 agcataggtggttgaattaaaactatcatttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggaca 28166081  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||| || ||||||| ||||||  ||||| ||||||||  | ||| |||||| |||||||    
T  28166080 attttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 46736829 - 46736680
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||| ||||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||| |||| ||    
T  46736829 cataagtggttgaactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgcaaaaaacatatagtttaaggacaat 46736730  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaata 162  Q
    ||| |||||||||||| |  || |||| ||||||  ||||| ||||||||    
T  46736729 tttgttcgatttaaaaaaaataagaccattttcgtgagttggtcaaaata 46736680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 36168506 - 36168377
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa---aaaacatatagtttagggac 109  Q
    ||||||||||||||||| ||||| ||||| | ||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||| |||| ||||    
T  36168506 cataggtggttggactataactgtcatttatatgcgtttctggagttagaaatagggagataagactaaaactgcaaaaaaaaacatataatttaaggac 36168407  T
Q  110 gattttattcgatttaaaagaggtaggacc 139  Q
    |||||| |||||||||||||||||| ||||    
T  36168406 gattttgttcgatttaaaagaggtaagacc 36168377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 24851639 - 24851559
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24851639 cataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaaa 24851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 35643743 - 35643581
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa------------aaaacatat 98  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||            |||||||||    
T  35643743 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgcaaaaaaaaaaaaaaaaaacatat 35643644  T
Q  99 agtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||||| |||| ||| || ||||||| ||||||  ||||| |||||||    
T  35643643 agtttaaggacgattttattcaattttaaaaagataggaccattttcgtgagttggtcaaaat 35643581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 229337 - 229164
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaata-gggagataggactaaaactgcaaaaaacat-atagtttaggga 108  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||| ||||| ||||| ||| |||||||||||| ||||||| |||||||| |||    
T  229337 agcataggtggttggactaaaactgtcacttttgtgcgtttatggagttgaaaataagggag-tagaactaaaactgca-aaaacatgatagtttaagga 229240  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||| ||| |||| ||||||| | |||| ||||||  || || ||||||||||| ||| |||| |||||||||    
T  229239 cgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaa 229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 19529063 - 19529184
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| |  ||||||||||| |||||||| ||||||||||| |||||||||||||||||  |||    
T  19529063 agcatagatggttggactaaaactgtcatttctgtgcgttttttaagttggaaatatggagatagaactaaaactgcaaaaaaacatatagtttaaagac 19529162  T
Q  110 gattttattcgatttaaaagag 131  Q
    |||||| ||| |||||||||||    
T  19529163 gattttgttcaatttaaaagag 19529184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 229529 - 229702
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||||||||| ||||||| || || || |||||||||||||||||| ||||| |||| ||||| ||||||||| |||||||| |||||||| ||||    
T  229529 agcataggtggttgtactaaaattgtcacttctgtgcgtttctggagttgaaaataaggaggtaggattaaaactgc-aaaaacatgatagtttaaggac 229627  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| || ||||| ||||||| | |||| ||||||  || || ||||||| ||| ||| |||| |||||||||    
T  229628 gattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 33778024 - 33778106
Alignment:
Q  53 tggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtag 135  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||    
T  33778024 tggagttggaaatagggagatagaactaaaactgcaaaaaacatataatttaggaacgattttgtttgatttaaaagaggtag 33778106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 36168701 - 36168851
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||||||  |||| ||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| | |      
T  36168701 agcataggtggttggactaaaactgtgatttatgtgcatttatggagttgaaaatagggagataggactaaaaccgcaaaaaacatataatttaagaata 36168800  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| ||| |||||||| |  ||||| | ||||||  ||||| |||||||    
T  36168801 attttgttctatttaaaaaaaataggatcattttcgtgagttggtcaaaat 36168851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 17504329 - 17504464
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||| ||| || ||||||||| ||||| | ||||||||| |||||| |||   |||| ||| ||||||| |||||||||||||||||||| |||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaaaaaacatatagtttaaggacg 17504428  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcg 146  Q
     |||| ||||||||||||||| ||||||| ||||||    
T  17504429 gttttgttcgatttaaaagagataggaccattttcg 17504464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 18965306 - 18965181
Alignment:
Q  21 gttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattc 119  Q
    ||||||||||||||| ||||| | ||||||||| |||||| ||||| |||| ||| |||||||||||| ||||||| |||||||| |||||||||| |||    
T  18965306 gttggactaaaactgtcatttatatgcgtttctagagttgaaaataaggaggtagaactaaaactgca-aaaacatgatagtttaaggacgattttgttc 18965208  T
Q  120 gatttaaaagaggtaggaccgttttcg 146  Q
    ||||| ||||||| | |||||||||||    
T  18965207 gatttgaaagaggcaagaccgttttcg 18965181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 26974662 - 26974788
Alignment:
Q  59 tggaaatagggagataggactaaaactgcaaaa-aacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatca 157  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||  |||||  | ||  |||    
T  26974662 tggaaataggaagatatgactaaaactgcaaaaaaacatatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattca 26974761  T
Q  158 aaatacgatgacaaaaaatgtaattaa 184  Q
    |||| | | ||| ||||||||||||||    
T  26974762 aaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 40160225 - 40160149
Alignment:
Q  55 gagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagagg 132  Q
    |||||| ||||||| || |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  40160225 gagttgaaaatagg-aggtaggactaaaactgcaaaaaacatatagtttagggacggttttgttcgatttaaaagagg 40160149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 17504149 - 17504015
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||| ||| || ||||||||| ||||| | | |||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||| ||||    
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaata-ggaggtaggactaaaactgcaaaaaacatgatagttta-ggac 17504052  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    | || | ||| |||| ||||||| |||||| ||||||    
T  17504051 ggttatgttccatttgaaagaggcaggaccattttcg 17504015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 24336133 - 24336268
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||| ||| | |||||||| ||||||||| | | |||||||||||||| ||||| || | |||||||||||  ||||||||||| ||| |||||| ||    
T  24336133 agcatatgtgataggactaaagctgccatttctatacgtttctggagttgaaaatatgg-ggtaggactaaaagagcaaaaaacatgataatttaggaac 24336231  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    | |||| |||||||| ||||||| |||||| ||||||    
T  24336232 ggttttgttcgatttgaaagaggcaggaccattttcg 24336268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 24335920 - 24335802
Alignment:
Q  28 taaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaa 126  Q
    |||||||| ||||| ||||||||| |||||||| |||||||| | ||||||||||||| |||||||||| |||||| ||  ||| |||| |||||||| |    
T  24335920 taaaactgtcatttatgtgcgtttttggagttgaaaatagggtg-taggactaaaactccaaaaaacatgatagttcagatacggttttgttcgatttga 24335822  T
Q  127 aagaggtaggaccgttttcg 146  Q
    |||||| | |||| ||||||    
T  24335821 aagaggcatgaccattttcg 24335802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 33777766 - 33777695
Alignment:
Q  53 tggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgattt 124  Q
    |||||||| |||| | ||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||    
T  33777766 tggagttgaaaatggagagataggattaaaattgcaaaaaacatatagtttaaggacgattttgttcgattt 33777695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 18965513 - 18965610
Alignment:
Q  18 gtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgatttt 115  Q
    |||||||||||||||||| ||||| ||||||||| |||||||| ||||||||   || |||||||||| | |||||||| |||||||||| ||||||||    
T  18965513 gtggttggactaaaactgtcatttatgtgcgtttatggagttgaaaataggggagtatgactaaaactac-aaaaacatgatagtttaggaacgatttt 18965610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 35643968 - 35644014
Alignment:
Q  51 tctggagttggaaatagggagataggactaaaactgcaaaaaacata 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  35643968 tctggagttggaaatagggagataagactaaaactgcaaaaaacata 35644014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 184
Target Start/End: Original strand, 40160497 - 40160633
Alignment:
Q  47 cgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttc 145  Q
    |||||||||||||| ||||||| || || ||||||||||||||||||||| |||||||| ||||| |||| ||| |||| ||||||| | |||  |||||    
T  40160497 cgtttctggagttgaaaatagg-aggtaagactaaaactgcaaaaaacatgatagttta-ggacggttttgttcaatttgaaagaggcatgactattttc 40160594  T
Q  146 gaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |  ||||| ||||||| | | ||| ||||||||||||||    
T  40160595 gtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 40160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 35193691 - 35193845
Alignment:
Q  28 taaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaa 126  Q
    ||||||||||||| |  |||||||||||||||| ||||| |||| || |||||||||  |||||||||| |||||||| ||||| |||| || ||||| |    
T  35193691 taaaactgccattctc-tgcgtttctggagttgaaaata-ggaggtatgactaaaacatcaaaaaacatgatagttta-ggacggttttgttagatttga 35193787  T
Q  127 aagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||| ||||||  || | |||||||| | | ||| |||| |||||||||    
T  35193788 aagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaa 35193845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 23986635 - 23986576
Alignment:
Q  73 taggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagag 131  Q
    |||||||||||||||||||||||| |||||||||||||  |||| |||||||| ||||||    
T  23986635 taggactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagag 23986576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 30597951 - 30598009
Alignment:
Q  73 taggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagag 131  Q
    |||||| |||| ||||| ||| ||||| ||||||||||||||| |||||||||||||||    
T  30597951 taggaccaaaagtgcaacaaaaatataatttagggacgattttgttcgatttaaaagag 30598009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 18751760 - 18751723
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaa 64  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaa 18751723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 41608870 - 41608935
Alignment:
Q  96 tatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||||| | |||||||| || ||||||||||||||||||||  |||||  ||||| |||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaat 41608935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 5114644 - 5114494
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5114644 agcataggtggttgaactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacg 5114545  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  |||||||||||||    
T  5114544 attttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaat 5114494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 31073512 - 31073685
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  31073512 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcacaaaacatatagtttagggaca 31073611  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| ||||  |||||  || || ||||||| | | ||| |||| |||||||||    
T  31073612 attttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 31073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 31574095 - 31574268
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31574095 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacg 31574194  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| |||   |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  31574195 attttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 31574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 24640555 - 24640705
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||| ||||| ||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  24640555 agcataggtggttggactagaactgtcatttctgtgcgttttcggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacg 24640654  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||||||| ||||||  |||||||||||||    
T  24640655 attttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaat 24640705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 5120848 - 5120965
Alignment:
Q  20 ggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattc 119  Q
    ||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5120848 ggttggattaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttc 5120947  T
Q  120 gatttaaaagaggtagga 137  Q
    ||||||||||||||||||    
T  5120948 gatttaaaagaggtagga 5120965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 25472382 - 25472533
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  25472382 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggac 25472481  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| || || |||| ||||||  ||||| |||||||    
T  25472482 gattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaat 25472533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 29891453 - 29891566
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgatt 113  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29891453 ataggtggttggactaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgatt 29891552  T
Q  114 ttattcgatttaaa 127  Q
    || ||| |||||||    
T  29891553 ttgttcaatttaaa 29891566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 28636566 - 28636669
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  28636566 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacg 28636665  T
Q  111 attt 114  Q
    ||||    
T  28636666 attt 28636669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 29891256 - 29891133
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||    
T  29891256 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaattaaaattgtaaaaaacatatagtttagggacg 29891157  T
Q  111 attttattcgatttaaaagaggta 134  Q
     |||| |||| |||||||||||||    
T  29891156 cttttgttcggtttaaaagaggta 29891133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 25469027 - 25468875
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgca--aaaaacatatagtttaggga 108  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||| ||  |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25469027 agcataggtggttggaataaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaacatatagtttaggga 25468928  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||| ||||||||||||||| || ||||  |||||  ||||| |||||||    
T  25468927 cgattttgttcgatttaaaagagatatgaccaatttcgtgagttggtcaaaat 25468875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 31573901 - 31573780
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa----aaaacatatagtttagg 106  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||| |    
T  31573901 agcataggtggttggactaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaaacatatagtttaag 31573802  T
Q  107 gacgattttattcgatttaaaa 128  Q
     |||||||| ||||||||||||    
T  31573801 aacgattttgttcgatttaaaa 31573780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 43 - 184
Target Start/End: Complemental strand, 28636435 - 28636295
Alignment:
Q  43 tgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgtt 142  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| ||| ||||  |    
T  28636435 tgtgcatttatggagttggaaatagggagatatgactaaaactgcaaaaa-catatagtttaggaacgattttgttcgatttaaaagaagtaagaccaat 28636337  T
Q  143 ttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||  ||||| ||||||||| ||||| ||||||||||||||    
T  28636336 ttcgtgagttggtcaaaatacaatgaccaaaaatgtaattaa 28636295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 30251064 - 30251179
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa-acatatagtttagggacgat 112  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||||| |||||||    
T  30251064 ataggtggttggactaaatctgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactacaaaaatacaaatagtttaaggacgat 30251163  T
Q  113 tttattcgatttaaaa 128  Q
    ||| ||||||||||||    
T  30251164 tttgttcgatttaaaa 30251179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 30250867 - 30250772
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagg 106  Q
    |||||| ||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||  |||||||| ||||||||||| |||||||||||    
T  30250867 agcataagtgattggactaaaactgtcatttctgtgcgtttctgtagttggaaatagggagaatggactaaagctgcaaaaaacttatagtttagg 30250772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 184
Target Start/End: Original strand, 35163557 - 35163730
Alignment:
Q  12 gcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaa--aacatatagtttagggac 109  Q
    ||||||| ||| || ||||||||| ||||| | || |||| |||||||| ||||||| || |||||||||||||||||||  ||||||||||||||||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaatagg-aggtaggactaaaactgcaaaaaaaacatatagtttagggac 35163655  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| || ||||| ||||||| || ||| ||||||  || || ||||||| ||  ||| |||| |||||||||    
T  35163656 gattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaa 35163730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 11523854 - 11523741
Alignment:
Q  18 gtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacat-atagtttagggacgatttt 115  Q
    |||||||||||| |||||| |||||||||||||| |||||||| |||||  ||| ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  11523854 gtggttggactagaactgcaatttttgtgcgtttatggagttgaaaata-tgaggtaggactaaaactgcaaaaaaacatgatagtttagggacggtttt 11523756  T
Q  116 attcgatttaaaaga 130  Q
     || ||||| |||||    
T  11523755 gtttgatttgaaaga 11523741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 184
Target Start/End: Complemental strand, 33095858 - 33095717
Alignment:
Q  43 tgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgt 141  Q
    ||||||||| ||||| || ||||||| || |||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||  |||| |    
T  33095858 tgtgcgtttttggaggtgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagtttagggacggttttgttcgatttgaaagaggtgagaccat 33095760  T
Q  142 tttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||  || |||| ||||| ||| ||| |||| || ||||||    
T  33095759 tttcgcgagctgataaaaatgcgaggaccaaaagtgcaattaa 33095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 31073290 - 31073185
Alignment:
Q  47 cgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-catatagtttaggg------acgattttattcgatttaaaagaggtaggacc 139  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||  |||||||||| ||      |||||||| |||||||||||| || |||||||    
T  31073290 cgtttctggagttggaaataggaagatatgactaaaactgcaaaaaataatatagtttaaggacttaaacgattttgttcgatttaaaaaagataggacc 31073191  T
Q  140 gttttc 145  Q
     |||||    
T  31073190 attttc 31073185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 184
Target Start/End: Original strand, 32836403 - 32836539
Alignment:
Q  47 cgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    |||||||| ||||| ||||||  || ||||||||||||||||||||||||| |||||| | ||| |||| |||||||| ||||||| | |||| ||||||    
T  32836403 cgtttctgaagttgaaaataga-aggtaggactaaaactgcaaaaaacatacagtttaagaacggttttgttcgatttgaaagaggcatgaccattttcg 32836501  T
Q  147 aaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
      || || ||||||| | | ||| |||| |||||||||    
T  32836502 tgagctggtcaaaatgcaaggactaaaagtgtaattaa 32836539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 835538 - 835435
Alignment:
Q  42 ttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgt 141  Q
    |||||||||| ||||| || |||||||| | |||||||||| ||||||||||   |||||||||||||  |||| |||||||| ||||||| | |||| |    
T  835538 ttgtgcgtttttggaggtgaaaataggggg-taggactaaagctgcaaaaaaatgatagtttagggacagttttgttcgatttgaaagaggcaagaccat 835440  T
Q  142 tttcg 146  Q
    |||||    
T  835439 tttcg 835435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 35163303 - 35163187
Alignment:
Q  68 ggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgat 166  Q
    |||| |||||||||||||||||||||||| |||||||| ||||| |||| |||||||| ||||||  | |||| |||| |  || || ||||||| |||     
T  35163303 ggaggtaggactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgag 35163205  T
Q  167 gacaaaaaatgtaattaa 184  Q
    ||| |||| |||||||||    
T  35163204 gactaaaagtgtaattaa 35163187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 22534211 - 22534164
Alignment:
Q  45 tgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    ||||||| |||||||| ||||||| || |||||||||||||||||||||    
T  22534211 tgcgtttttggagttgaaaatagg-aggtaggactaaaactgcaaaaaa 22534164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 30786948 - 30786820
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30786948 agcataagtggttggactaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 30786849  T
Q  111 attttattcgatttaaaagaggtaggacc 139  Q
    ||||| |||||||||||||||||||||||    
T  30786848 attttgttcgatttaaaagaggtaggacc 30786820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 52335880 - 52336008
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  52335880 agcatatgtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaatatagtttagggacg 52335979  T
Q  111 attttattcgatttaaaagaggtaggacc 139  Q
    ||||| |||||||||||||||||||||||    
T  52335980 attttgttcgatttaaaagaggtaggacc 52336008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 8230013 - 8230184
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  8230013 cataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgat 8230112  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||| ||||||||||||||||||  ||| ||||||  | | | ||||||| |||  || ||||||||||||||    
T  8230113 tttgttcgatttaaaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaa 8230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 21938739 - 21938589
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21938739 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttatggacg 21938640  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || || || | ||||||  |||||||||||||    
T  21938639 attttgttcgatttaaaaaagataagatcattttcgtgagttgatcaaaat 21938589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 1837681 - 1837508
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||     
T  1837681 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttagggaca 1837582  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||| || || |  |||||  ||||||||||||| | | ||| |||| |||||||||    
T  1837581 attttgttcgatttaaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 1837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 10278725 - 10278551
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  10278725 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacatatagtttagggac 10278626  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| ||||||||||||||||||||| |  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  10278625 gattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 10278551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 17641734 - 17641912
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-----atagtttag 105  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |      |||||||||    
T  17641734 agcataggtggttgaactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttag 17641833  T
Q  106 ggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||||| |||||||||||||||||| |||| ||||||  ||||| ||||||| ||| ||| |||| |||||||||    
T  17641834 ggacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 2868080 - 2868213
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||| |||||||||||||||||| || || ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  2868080 catatgtggttggactaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtgtagggacgat 2868179  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||| ||||||||||||||||||||||| ||||||    
T  2868180 tttgttcgatttaaaagaggtaggaccattttcg 2868213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 16298858 - 16298685
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||  ||||| | ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16298858 agcataggtggttggactaaaactatcatttatttgcgtttccagagttggaaataggtagataggactaaaactgcaaaaaacatatagtttagggacg 16298759  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| |||||||||||||||||| ||||  |||||  ||||| ||||||| | | | | ||||||||||||||    
T  16298758 attttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaagggccaaaaatgtaattaa 16298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 34555750 - 34555902
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaacatatagtttaggga 108  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||    
T  34555750 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaagga 34555849  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||| |||||||||||| || ||||||| ||||||  ||||| |||||||    
T  34555850 cgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaat 34555902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 44954596 - 44954769
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  44954596 agcataggtggtttgactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttatggatg 44954695  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| || ||||||||| ||||| || | |||||   ||||| ||||||| ||| ||| |||| |||||||||    
T  44954696 attttgtttgatttaaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaa 44954769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 443921 - 444044
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  443921 agcataggtggttggactaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaacatatagtttaggaacg 444020  T
Q  111 attttattcgatttaaaagaggta 134  Q
    ||||| ||||||||||||||||||    
T  444021 attttgttcgatttaaaagaggta 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 4080195 - 4080074
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  4080195 catagatggttggactaaaactgtcatttttgtgcgtttctagagttggaaatagggagatatgactaaaactgtaaaaaacatatagtttagggacgat 4080096  T
Q  113 tttattcgatttaaaagaggta 134  Q
    ||| |||||||||||| |||||    
T  4080095 tttgttcgatttaaaataggta 4080074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 9992331 - 9992182
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  9992331 agcataggtggtcggactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacc 9992232  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaa 160  Q
    ||||| |||||||||||| || ||||||| ||| ||  ||||| ||||||    
T  9992231 attttgttcgatttaaaaaagataggaccatttccgtgagttggtcaaaa 9992182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 8229816 - 8229663
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa---aaaacatatagtttaggg 107  Q
    |||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| |    
T  8229816 agcatatgtagttggactaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaaacatatagtttagag 8229717  T
Q  108 acgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||||||||||||||||||| |||| | | ||||||  |||||||||||||    
T  8229716 acgattttattcgatttaaaagatgtagaatcattttcgtgagttgatcaaaat 8229663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 44582233 - 44582083
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||| || ||||| ||||||||| |||||||||||| |  ||||||||||||||||||||||||||||||| ||||| ||||    
T  44582233 agcataggtggttggactaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaacatataatttagagacg 44582134  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||||||||||||||  |||||  ||||| |||||||    
T  44582133 attttgttcgatttaaaagaggtaggaccaatttcgttagttggtcaaaat 44582083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 44954402 - 44954229
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||| ||||  ||||    
T  44954402 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgcaaaaaacatataatttaaagacg 44954303  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| || ||||||||| ||||| |||| ||||||  ||||| |||||||  |  ||||||||||||||||||    
T  44954302 attttgttggatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 34555557 - 34555382
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactg--caaaaaacatatagtttaggga 108  Q
    |||||| ||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  34555557 agcatatgtggttgaactaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaaacatatagtttaggga 34555458  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||| ||||||||||||||||||| |||  |||||  ||||  ||||||| | | ||| |||| |||||||||    
T  34555457 cgattttgttcgatttaaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaa 34555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 37421338 - 37421163
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa--aaaacatatagtttaggga 108  Q
    ||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||    
T  37421338 agcataggtggttagactaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgcaaaaaaaacatatagtttaggga 37421239  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||| |||||||||||||||||| ||||  |||||  | ||| ||||||| | | ||| |||| |||||||||    
T  37421238 cgattttgttcgatttaaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaa 37421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 29439107 - 29438933
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    |||||||||||||||||||||||||  ||||||||| |||| | || ||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  29439107 agcataggtggttggactaaaactgttatttttgtgtgttttttgaattgaaaatagagagataggactaaaactgcaaaaaaacatttagtttagggac 29439008  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| |||||||||||||||||||||||  |||||  ||||| ||||||| | | ||| |||| |||||||||    
T  29439007 gattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 29438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 37505438 - 37505610
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  37505438 agcataggtggttggactaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgc-aaaaacatatagtttatggacg 37505536  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| || | |||||||||| || || |  |||||  ||||| ||||||||  | ||| |||||| |||||||    
T  37505537 attttgtttgttttaaaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaa 37505610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 1744500 - 1744331
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggacgat 112  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  1744500 ataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaatatatagtttagggacgat 1744401  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| || |  ||| |||||||| | ||| ||  ||||  ||||||||||| ||| |||| |||||||||    
T  1744400 tttatttgact--aaaaaggtaggatcatttacgtgagtttgtcaaaatacgaagaccaaaagtgtaattaa 1744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 16299055 - 16299201
Alignment:
Q  14 ataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgatt 113  Q
    ||||||||||| ||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  16299055 ataggtggttgaactaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaacatatagtttaaggacgatt 16299154  T
Q  114 ttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    || ||| | |||||| |  ||||||| ||||||  |||||||||||||    
T  16299155 ttgttc-aattaaaaaaaataggaccattttcgcgagttgatcaaaat 16299201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 17641539 - 17641406
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| | || ||    
T  17641539 cataggtggttgaactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaactaaaactacaaaaaacgtatagtttaagaacaat 17641440  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||| |||||||||||| ||||| |||| ||||||    
T  17641439 tttgttcgatttaaaaaaggtatgaccattttcg 17641406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 23340359 - 23340186
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| ||||||| |||||||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| |  ||    
T  23340359 agcatatgtggttgaactaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttatgagcg 23340260  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||| ||||||||||||||| |||||||  |||||  ||||| ||||||| | ||||  |||| |||||||||    
T  23340259 attttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaa 23340186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 2868077 - 2867914
Alignment:
Q  21 gttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcg 120  Q
    ||||||||||||||| ||||| ||||||||| ||||||| || ||||||| ||| |||||||||||||||||||||||||||||  ||| ||||| ||||    
T  2868077 gttggactaaaactgtcatttatgtgcgtttttggagttagagatagggaaatatgactaaaactgcaaaaaacatatagtttaacgacaattttgttcg 2867978  T
Q  121 atttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||||| || || | ||||||  ||||| ||||||| ||||||| |||| |||||||||    
T  2867977 atttaaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaa 2867914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 9992525 - 9992659
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||| |||||||| |||||||| ||||| |  ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| | |||    
T  9992525 agcatagatggttggattaaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaacatatagtttaagcacg 9992624  T
Q  111 attttattcgatttaaaagaggtaggaccgttttc 145  Q
    ||||| |||||||||||| || ||||||| |||||    
T  9992625 attttgttcgatttaaaaaagataggaccattttc 9992659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 10278922 - 10279066
Alignment:
Q  13 cataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgat 112  Q
    |||| |||||||||||||||||| ||||| |||| ||||||||||||||| ||| |||||||||||||||||||   ||||||||||||||| |||||||    
T  10278922 catatgtggttggactaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg---aaaacatatagtttaaggacgat 10279018  T
Q  113 tttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaa 160  Q
    ||| |||||||||||| || ||||||| ||||||  ||||| ||||||    
T  10279019 tttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaa 10279066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 39485224 - 39485068
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaa 126  Q
    ||||||||| ||| | | || ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  39485224 ctaaaactgtcatctctctgtgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttga 39485126  T
Q  127 aagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||||||| ||||||  || |  ||||||| ||| ||| |||| |||||||||    
T  39485125 aagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaa 39485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 45048314 - 45048158
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaa 126  Q
    |||||||||  |||| | |||||||||||||||| ||||| | || |||||||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  45048314 ctaaaactgttatttctatgcgtttctggagttgaaaatatg-aggtaggactaaaactgcaaaaaacatatagtttatggacgattttgttcaatttaa 45048216  T
Q  127 aagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||||||||| ||| |||||| |||||| ||||||| | | ||| |||| |||||||||    
T  45048215 aagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 50926611 - 50926784
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||||||||||||||||||||| |||||| |||| |||| |||||||| |||||||| |  ||||||||||||||||||||   ||||||||||||||    
T  50926611 agcataggtggttggactaaaactaccatttatgtgtgtttatggagttgaaaatagggggtaaggactaaaactgcaaaaaaatgatagtttagggacg 50926710  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
     |||| |||||||| ||||||   ||||| ||||||  || || ||||||| ||||||| |||| |||||||||    
T  50926711 gttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaa 50926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 6224875 - 6224756
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa--acatatagtttaggga 108  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||  | ||||| |||| |||    
T  6224875 agcataggtggtttgactaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactgtaaaaaatatatataatttaagga 6224776  T
Q  109 cgattttattcgatttaaaa 128  Q
    ||||||| ||||||||||||    
T  6224775 cgattttgttcgatttaaaa 6224756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 37505232 - 37505093
Alignment:
Q  23 tggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggacgattttattcga 121  Q
    ||||||||||||| ||||| ||| | ||| |||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  37505232 tggactaaaactgtcatttctgttcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcga 37505133  T
Q  122 tttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||| || ||| ||| ||||||  ||||| |||||||    
T  37505132 tttaaaaaagatagaaccattttcgtgagttggtcaaaat 37505093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 9833522 - 9833643
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||||||| ||||||||| ||  |||| |||||||||||||||||| |||||||| | |||||||||||||||||||||||| ||| |||||||||    
T  9833522 agcataggtggtaggactaaaaatgttatttctgtgcgtttctggagttgaaaataggg-ggtaggactaaaactgcaaaaaacataatattttagggac 9833620  T
Q  110 gattttattcgatttaaaagagg 132  Q
    |||||| |||||||| |||||||    
T  9833621 gattttgttcgatttgaaagagg 9833643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 50926408 - 50926283
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaca--tatagtttaggga 108  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||  |  |||||||||||||||||||| |   ||||||||||||    
T  50926408 agcataggtggttggactaaaactaccatttatgtgtgtttctggagttgaaaataggaggtaaggactaaaactgcaaaaaaaaatgatagtttaggga 50926309  T
Q  109 cgattttattcgatttaaaagaggta 134  Q
    ||||||| |||||||| |||||||||    
T  50926308 cgattttgttcgatttgaaagaggta 50926283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 44582427 - 44582579
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcg-tttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttaggga 108  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||| || ||||||||||| | |||||||||||| |||||||||||||||||  ||    
T  44582427 agcataggtggttggactaaaactgtcatttctgtgcgttttttggagctgaaaatagggagacaagactaaaactgcaaaaaaacatatagtttaaaga 44582526  T
Q  109 cgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||| |||||||| |||  | || |||| ||||||  |||||||||||||    
T  44582527 cgattttgttcgatttgaaaatgatatgaccattttcgtgagttgatcaaaat 44582579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 50305152 - 50305289
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc---aaaaaacatatagtttaggg 107  Q
    |||||| || |||||| |||||||| ||||| |||| |||| |||||||| ||||||||||||| ||||||||||||   |||||| |||||||||| ||    
T  50305152 agcataagtagttggattaaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaaaaaatatatagtttaagg 50305251  T
Q  108 acgattttattcgatttaaaagaggtaggaccgttttc 145  Q
    |||||||| |||||||||||| || ||||||| |||||    
T  50305252 acgattttgttcgatttaaaaaagataggaccattttc 50305289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 29021234 - 29021356
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaac--atatagtttaggga 108  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||| | || |||||||||||||||||||    ||| ||||||||    
T  29021234 agcataggtggttggacaaaaactgtcatttatgtgcgtttctggagttgaaaataggg-ggtaagactaaaactgcaaaaaaccgtgataatttaggga 29021332  T
Q  109 cgattttattcgatttaaaagagg 132  Q
    ||||||| |||||||| |||||||    
T  29021333 cgattttgttcgatttgaaagagg 29021356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 50304958 - 50304876
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    |||||||||||||||| ||||| ||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  50304958 agcataggtggttggattaaaattgccatttttgtgtgtttatggagtttgaaatagggagatatgactaaaactgcaaaaaa 50304876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 23526833 - 23526699
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    ||||||| |||||| |||||| ||| ||||| ||||||||| |||||||| |||||||| |   |||||||||||||||||||   ||||| |||||| |    
T  23526833 agcatagatggttgtactaaa-ctgtcatttctgtgcgtttttggagttgaaaatagggggcagggactaaaactgcaaaaaaatgatagtctagggatg 23526735  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||||| |||||||||||||||| |||||| ||||||    
T  23526734 attttgttcgatttaaaagaggcaggaccattttcg 23526699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 29439329 - 29439442
Alignment:
Q  49 tttctggagttggaaatagggagataggactaaaactgcaaaa--aacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||  ||||||||||||| |||||||||| |||||||||||| || ||||| | ||||||    
T  29439329 tttctggagtttgaaatagg-agataggactaaatctgcaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcg 29439427  T
Q  147 aaagttgatcaaaat 161  Q
      |||||||||||||    
T  29439428 tgagttgatcaaaat 29439442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 44291701 - 44291854
Alignment:
Q  31 aactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaag 129  Q
    ||||||||||| | || ||||||||||||| |||||||| | |||||||||||||||||||||||| ||||||  | |||||||||||||||||||||||    
T  44291701 aactgccatttctatgtgtttctggagttgaaaataggggg-taggactaaaactgcaaaaaacatgatagttaggtgacgattttattcgatttaaaag 44291799  T
Q  130 aggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    ||  | |||| |||||   || || ||||||||| | ||| ||||||| ||||||    
T  44291800 agacatgaccattttcatgagctggtcaaaatacaaggactaaaaatgcaattaa 44291854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 17088526 - 17088682
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaa 126  Q
    ||||||||| ||||| | ||||||||| || ||| ||||||| || ||| ||||||||||||||||| |||||||||||||||| |||| || ||||| |    
T  17088526 ctaaaactgtcatttctctgcgtttctagatttgaaaatagg-aggtagaactaaaactgcaaaaaatatatagtttagggacggttttgtttgatttga 17088624  T
Q  127 aagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| | |||| ||||||  || || |||||||  || ||| |||| |||||||||    
T  17088625 aagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaa 17088682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 45048540 - 45048678
Alignment:
Q  45 tgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtaggaccgttt 143  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||| ||||| |||| |||||||  ||||||||| |||| |||    
T  45048540 tgcgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgattggaaagaggtatgaccattt 45048637  T
Q  144 tcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||  |  || ||||||| ||| ||| |||| |||||||||    
T  45048638 tcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaa 45048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 44802557 - 44802662
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 125  Q
    |||||| || ||||||| || ||||||||||||| ||||| |||| ||| |||||||||||||||||||| ||||||||||||||||||| |||  |||     
T  44802557 ctaaaattgtcatttttctgtgtttctggagttgaaaata-ggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttg 44802655  T
Q  126 aaagagg 132  Q
    |||||||    
T  44802656 aaagagg 44802662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 50304532 - 50304442
Alignment:
Q  94 catatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||||||| ||||||||| |||||||||||||||||| |||| ||||||  ||||| ||||||| ||| ||| |||| |||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 50304442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 29021056 - 29020936
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||  ||| |||||||||||| ||||| ||||||||| ||||| || |||||||||| ||  ||||||| |||||||||||| ||| |||| |||     
T  29021056 agcatagcgggtaggactaaaactgacatttatgtgcgtttttggaggtgaaaatagggag-taacactaaaattgcaaaaaacatgataatttaaggat 29020958  T
Q  110 gattttattcgatttaaaagag 131  Q
    |||||| |||||||||||||||    
T  29020957 gattttgttcgatttaaaagag 29020936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 30787142 - 30787224
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa 93  Q
    ||||||||| ||||||||||||||| ||||| | ||| ||| |||||||| ||||||||| |||||||||||| || ||||||    
T  30787142 agcataggtagttggactaaaactgtcatttctctgcatttatggagttgaaaatagggaaataggactaaaattgaaaaaaa 30787224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 411
Target Start/End: Original strand, 10915644 - 10915713
Alignment:
Q  343 tcaatttgctttgatgacaaacactaattttt-catcaaaatctttgtattatactactatttttccttg 411  Q
    ||||||||||||||||| ||||||| |||||| ||| |||||||||||||| |||| |||||||||||||    
T  10915644 tcaatttgctttgatgaaaaacactcattttttcataaaaatctttgtattttactgctatttttccttg 10915713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 44291477 - 44291356
Alignment:
Q  12 gcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc--aaaaaacat-atagtttaggga 108  Q
    |||||||||||  |||||||||||| | ||||||||||||||||| ||| ||| | |||| || ||||||||||||  ||||||||| |||||||| |||    
T  44291477 gcataggtggtacgactaaaactgcta-ttttgtgcgtttctggatttgaaaaca-ggaggtatgactaaaactgcaaaaaaaacatgatagtttatgga 44291380  T
Q  109 cgattttattcgatttaaaagagg 132  Q
    ||||||| ||| |||| |||||||    
T  44291379 cgattttgttcaatttgaaagagg 44291356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 165
Target Start/End: Original strand, 48174113 - 48174246
Alignment:
Q  39 tttttgtgcgtttctggagttggaaatagggagataggactaaaactgca-------aaaaacat-atagtttagggacgattttattcgatttaaaaga 130  Q
    ||||| |||||||||||||||| |||||||| | | ||||||||||||||       |||||||| |||||||||||||| |||| || |||||||||||    
T  48174113 tttttttgcgtttctggagttgaaaataggggg-tgggactaaaactgcacaaaaaaaaaaacatgatagtttagggacggttttgtttgatttaaaaga 48174211  T
Q  131 ggtaggaccgttttcgaaagttgatcaaaatacga 165  Q
    |  || ||||||||||  || ||||||||||||||    
T  48174212 gacagaaccgttttcgtgagctgatcaaaatacga 48174246  T

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Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 37421386 - 37421488
Alignment:
Q  83 actgcaaaaaacatatagtttagggacgattttattcgattt-aaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaat 181  Q
    |||||||||| ||||||||||| |||||||||| |||||||| |||| || ||||||| ||||||  ||||| |||||||   ||||| |||| ||||||    
T  37421386 actgcaaaaatcatatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaat 37421485  T
Q  182 taa 184  Q
    |||    
T  37421486 taa 37421488  T

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Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 17088326 - 17088149
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-----aaaaaacat-atagttta 104  Q
    |||||||| ||| || ||||||||||||||| | ||| |||||| ||||| ||||| |||| ||||||||||| |||     ||||||||| ||||||||    
T  17088326 agcataggaggtaggtctaaaactgccatttctctgcatttctgaagttgaaaata-ggaggtaggactaaaattgcaaaaaaaaaaacatgatagttta 17088228  T
Q  105 gggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
     ||||| |||| |||||||| ||||||| |  ||| ||||||  || || ||||||| ||||||| || | |||||||||    
T  17088227 -ggacggttttgttcgatttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaacagtgtaattaa 17088149  T

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Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 183
Target Start/End: Complemental strand, 25274869 - 25274760
Alignment:
Q  74 aggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaa 173  Q
    ||||| |||| |||||||||||| ||||||||| ||| |||| |||||||| ||||||| | |||| ||||||  || || ||||||| ||| ||| |||    
T  25274869 aggaccaaaaatgcaaaaaacatgtagtttaggaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaa 25274770  T
Q  174 aatgtaatta 183  Q
    | || |||||    
T  25274769 agtgcaatta 25274760  T

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Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 30787245 - 30787318
Alignment:
Q  88 aaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||||||||||||||| |||||||||| |||||||| ||| || || |||| ||||||  |||||||| ||||    
T  30787245 aaaaaacatatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaat 30787318  T

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Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 48173911 - 48173803
Alignment:
Q  25 gactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacat-atagtttagggacgattttattcgat 122  Q
    ||||||||||| ||||| || | |||| |||||||| |||||||| | || |||||||| ||| ||||||||| ||| ||||||| ||||||| ||||||    
T  48173911 gactaaaactgtcatttatgagagtttttggagttgaaaataggg-ggtatgactaaaagtgcaaaaaaacatgataatttagggtcgattttgttcgat 48173813  T
Q  123 ttaaaagagg 132  Q
    || |||||||    
T  48173812 ttgaaagagg 48173803  T

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Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 145
Target Start/End: Original strand, 23526942 - 23527034
Alignment:
Q  53 tggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttc 145  Q
    |||||||| |||||||| |   |||||||||||||||||||   ||||||||| |||| |||| |||||||||||| ||| | |||| |||||    
T  23526942 tggagttgaaaatagggggcacggactaaaactgcaaaaaaatgatagtttagagacggttttgttcgatttaaaaaaggcatgaccattttc 23527034  T

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Target: scaffold0097 (Bit Score: 103; Significance: 5e-51; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 46443 - 46269
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaacatatagtttagggac 109  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||     
T  46443 agcataggtggttggactaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggat 46344  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||| ||||||||||||||||||| ||| |||||| |||||| ||||||| ||| ||| |||| || ||||||    
T  46343 gattttgttcgatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaa 46269  T

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Target: scaffold0097; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 46637 - 46788
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgc-aaaaaacatatagtttagggac 109  Q
    ||||||||||||||||| |||| || ||||| ||||||||| ||||||||||||||||| ||||| ||||||||| | |||||||||||||||||  |||    
T  46637 agcataggtggttggaccaaaattgtcatttatgtgcgtttttggagttggaaatagggtgatagaactaaaactacaaaaaaacatatagtttaaagac 46736  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    |||||| |||||||||||| |  ||||||| ||||||  ||||| |||||||    
T  46737 gattttgttcgatttaaaatatataggaccattttcgtgagttggtcaaaat 46788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 6568 - 6418
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| ||||||||| |||||||| ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  6568 agcatatgtggttggaataaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacatataatttaaggacg 6469  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||| ||| |||||   |||||||||||||    
T  6468 attttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaat 6418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 6761 - 6916
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggaga----taggactaaaactgc-aaaaaacatatagtttag 105  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||| |||||||||||    ||||||||||||||| ||||||||| ||||||||    
T  6761 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttag 6860  T
Q  106 ggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    | |||||||| |||||||||||||| ||| ||||  ||||| || ||| |||||||    
T  6861 gtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaat 6916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 6586 - 6436
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacg 110  Q
    |||||| ||||||||| |||||||| ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  6586 agcatatgtggttggaataaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacatataatttaaggacg 6487  T
Q  111 attttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    ||||| |||||||||||| || ||| ||| |||||   |||||||||||||    
T  6486 attttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaat 6436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 6779 - 6934
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggaga----taggactaaaactgc-aaaaaacatatagtttag 105  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||| |||||||||||    ||||||||||||||| ||||||||| ||||||||    
T  6779 agcatatgtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttag 6878  T
Q  106 ggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaat 161  Q
    | |||||||| |||||||||||||| ||| ||||  ||||| || ||| |||||||    
T  6879 gtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 78493 - 78395
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggac 109  Q
    |||||||||||||||||||||| || ||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  78493 agcataggtggttggactaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgcaaaaaacatatagtttagggac 78395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 4e-27; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 205738 - 205910
Alignment:
Q  11 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||| ||| || ||||||||||||||| | ||||||| |||||||| |||||||  | |||||||||||||||||||| ||| |||||||||||||    
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacg-taggactaaaactgcaaaaa-catgatagtttagggac 205835  T
Q  110 gattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    | |||| |||||||| ||||||| |||||| ||||||  ||||| |||||||  || ||| |||| |||||||||    
T  205836 ggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaa 205910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 205110 - 205028
Alignment:
Q  27 ctaaaactgccatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 109  Q
    |||||||| |||||| | || |||||| |||||| ||||||| || |||||||||||||||||||||||| |||||||||||||    
T  205110 ctaaaacttccatttctctgtgtttctagagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagtttagggac 205028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 210793 - 210880
Alignment:
Q  97 atagtttagggacgattttattcgatttaaaagaggtaggaccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    |||||||||||||| |||| |||||||| ||||||| |||||| |||||   ||||| |||||||  || ||| |||| |||||||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaa 210880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 184
Target Start/End: Original strand, 15497 - 15641
Alignment:
Q  39 tttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagaggtagga 137  Q
    ||||| |||||||||||||||| ||||||| || || |||||||||| |||||| ||| |||||||||||||  |||| |||||||| ||||||  ||||    
T  15497 tttttttgcgtttctggagttgaaaatagg-aggtatgactaaaactacaaaaa-catgatagtttagggacagttttgttcgatttgaaagagtcagga 15594  T
Q  138 ccgttttcgaaagttgatcaaaatacgatgacaaaaaatgtaattaa 184  Q
    || ||||||  || |||||||||| |||  || |||||| |||||||    
T  15595 ccattttcgtgagctgatcaaaatgcgagaaccaaaaatctaattaa 15641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 498 - 570
Alignment:
Q  74 aggactaaaactgcaaaaaacatatagtttagggacgattttattcgatttaaaagaggtaggaccgttttcg 146  Q
    ||||| |||||||||||||||||||||||||| |||  |||| |||||||| ||||||| | |||| ||||||    
T  498 aggaccaaaactgcaaaaaacatatagtttagagactgttttgttcgatttgaaagaggcaagaccattttcg 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 159283 - 159371
Alignment:
Q  43 tgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgatttaaaagag 131  Q
    ||||||||| ||||| || |||||||| | || |||||||||||||||||| || |||||||| | |||||||| |||||||| ||||||    
T  159283 tgtgcgtttttggaggtgaaaataggggg-tatgactaaaactgcaaaaaatatgatagtttatgaacgattttgttcgatttgaaagag 159371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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