View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19918_high_7 (Length: 404)

Name: NF19918_high_7
Description: NF19918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19918_high_7
NF19918_high_7
[»] chr2 (50 HSPs)
chr2 (253-387)||(13802147-13802287)
chr2 (1-93)||(17444150-17444242)
chr2 (2-92)||(31580852-31580942)
chr2 (1-93)||(6402918-6403010)
chr2 (1-93)||(16406089-16406181)
chr2 (1-93)||(32126303-32126395)
chr2 (2-93)||(35963651-35963742)
chr2 (1-90)||(41250750-41250839)
chr2 (4-93)||(42442948-42443037)
chr2 (163-252)||(42443099-42443188)
chr2 (1-93)||(18982504-18982596)
chr2 (1-92)||(771694-771785)
chr2 (163-253)||(6402767-6402857)
chr2 (163-253)||(17443986-17444076)
chr2 (166-252)||(16406240-16406326)
chr2 (166-252)||(41250588-41250674)
chr2 (4-93)||(8058458-8058547)
chr2 (163-251)||(32126182-32126270)
chr2 (165-251)||(2287028-2287114)
chr2 (1-93)||(26238574-26238667)
chr2 (163-252)||(31580687-31580776)
chr2 (4-92)||(45419545-45419633)
chr2 (165-252)||(26161698-26161785)
chr2 (1-93)||(7071644-7071736)
chr2 (163-244)||(17090231-17090312)
chr2 (163-252)||(26238700-26238789)
chr2 (163-252)||(35963799-35963888)
chr2 (168-252)||(7071522-7071606)
chr2 (166-246)||(18982657-18982737)
chr2 (1-90)||(2286867-2286949)
chr2 (163-251)||(4554296-4554384)
chr2 (163-239)||(8058317-8058393)
chr2 (163-240)||(17035724-17035801)
chr2 (166-218)||(45122224-45122276)
chr2 (181-246)||(772269-772334)
chr2 (179-218)||(26655720-26655759)
chr2 (163-206)||(31393022-31393065)
chr2 (179-246)||(35649540-35649607)
chr2 (179-246)||(42477583-42477650)
chr2 (179-216)||(40653800-40653837)
chr2 (48-92)||(4554419-4554463)
chr2 (179-251)||(18425814-18425886)
chr2 (163-203)||(19951740-19951780)
chr2 (61-93)||(26161848-26161880)
chr2 (210-252)||(12755831-12755873)
chr2 (165-203)||(45261753-45261791)
chr2 (4-53)||(12755993-12756042)
chr2 (1-34)||(26161876-26161909)
chr2 (165-205)||(33453094-33453134)
chr2 (179-251)||(42755571-42755643)
[»] chr5 (46 HSPs)
chr5 (163-252)||(1775331-1775420)
chr5 (2-92)||(39656643-39656733)
chr5 (1-93)||(16155851-16155943)
chr5 (4-92)||(16333016-16333104)
chr5 (1-93)||(19986404-19986496)
chr5 (1-93)||(26282432-26282524)
chr5 (1-93)||(36292735-36292827)
chr5 (165-254)||(39435828-39435917)
chr5 (1-93)||(10036867-10036959)
chr5 (2-93)||(13818938-13819029)
chr5 (163-246)||(13819090-13819173)
chr5 (10-93)||(39435669-39435752)
chr5 (163-252)||(26282281-26282370)
chr5 (163-252)||(36292573-36292662)
chr5 (163-246)||(16332874-16332957)
chr5 (163-246)||(39656489-39656572)
chr5 (4-93)||(28801837-28801927)
chr5 (4-93)||(17331111-17331200)
chr5 (166-246)||(10037029-10037109)
chr5 (1-93)||(31500832-31500924)
chr5 (163-252)||(16156021-16156113)
chr5 (1-93)||(36292314-36292408)
chr5 (4-93)||(12277970-12278059)
chr5 (163-252)||(19986571-19986660)
chr5 (11-90)||(1775496-1775575)
chr5 (4-89)||(31681329-31681414)
chr5 (4-89)||(33431283-33431368)
chr5 (164-252)||(31500675-31500763)
chr5 (166-245)||(28801963-28802042)
chr5 (1-93)||(43069802-43069898)
chr5 (163-251)||(43069977-43070063)
chr5 (1-72)||(15959080-15959152)
chr5 (10-81)||(192764-192835)
chr5 (34-92)||(37255625-37255683)
chr5 (165-246)||(36292492-36292571)
chr5 (165-217)||(192858-192910)
chr5 (163-203)||(1280808-1280848)
chr5 (163-246)||(3055709-3055792)
chr5 (179-246)||(14317129-14317196)
chr5 (178-216)||(204094-204132)
chr5 (179-252)||(2985846-2985919)
chr5 (163-203)||(27168711-27168751)
chr5 (179-216)||(4306709-4306746)
chr5 (179-216)||(15497483-15497520)
chr5 (179-211)||(12098059-12098091)
chr5 (210-254)||(17330968-17331012)
[»] chr7 (37 HSPs)
chr7 (1-93)||(5556422-5556514)
chr7 (1-90)||(36631776-36631865)
chr7 (1-93)||(34468449-34468541)
chr7 (163-252)||(36631941-36632030)
chr7 (4-93)||(3113237-3113326)
chr7 (1-93)||(14775710-14775802)
chr7 (1-93)||(15226163-15226255)
chr7 (1-90)||(8395084-8395173)
chr7 (1-93)||(7003586-7003678)
chr7 (1-93)||(7049457-7049549)
chr7 (163-246)||(8395290-8395373)
chr7 (166-246)||(34468333-34468413)
chr7 (163-253)||(3113088-3113178)
chr7 (163-252)||(14775547-14775636)
chr7 (163-252)||(15226000-15226089)
chr7 (4-93)||(26625707-26625796)
chr7 (4-93)||(38637497-38637586)
chr7 (4-92)||(43183585-43183673)
chr7 (4-93)||(8866846-8866935)
chr7 (4-93)||(37001354-37001443)
chr7 (165-246)||(11019574-11019655)
chr7 (165-252)||(33686646-33686733)
chr7 (163-252)||(36659284-36659374)
chr7 (163-252)||(7003747-7003836)
chr7 (163-252)||(7049618-7049707)
chr7 (1-54)||(36659128-36659181)
chr7 (179-252)||(26493570-26493643)
chr7 (165-203)||(9230628-9230666)
chr7 (59-93)||(11019704-11019738)
chr7 (163-199)||(18375630-18375666)
chr7 (163-206)||(47729950-47729993)
chr7 (165-252)||(19400209-19400298)
chr7 (179-216)||(22937737-22937774)
chr7 (166-203)||(25491542-25491579)
chr7 (179-216)||(37966175-37966212)
chr7 (179-216)||(38826059-38826096)
chr7 (181-218)||(45197886-45197923)
[»] chr6 (21 HSPs)
chr6 (1-93)||(34947941-34948033)
chr6 (2-92)||(13838760-13838850)
chr6 (1-93)||(399578-399670)
chr6 (1-93)||(33228466-33228559)
chr6 (164-252)||(399731-399819)
chr6 (1-93)||(29744229-29744322)
chr6 (163-246)||(34947799-34947882)
chr6 (4-89)||(28997692-28997777)
chr6 (1-93)||(31028069-31028162)
chr6 (1-93)||(34253092-34253182)
chr6 (165-252)||(29744393-29744478)
chr6 (168-251)||(34253232-34253314)
chr6 (163-252)||(33228298-33228385)
chr6 (178-233)||(24074656-24074711)
chr6 (165-203)||(11971188-11971226)
chr6 (163-203)||(32441882-32441922)
chr6 (165-208)||(30621394-30621437)
chr6 (163-201)||(12180430-12180468)
chr6 (179-216)||(3051108-3051145)
chr6 (179-216)||(34385040-34385077)
chr6 (163-203)||(25599382-25599422)
[»] chr1 (37 HSPs)
chr1 (1-93)||(23313954-23314046)
chr1 (1-93)||(15209403-15209496)
chr1 (166-251)||(42309899-42309984)
chr1 (1-90)||(17446253-17446342)
chr1 (1-93)||(11957473-11957565)
chr1 (1-93)||(32981173-32981265)
chr1 (163-253)||(7434532-7434622)
chr1 (9-90)||(7434390-7434471)
chr1 (1-93)||(41971370-41971463)
chr1 (2-93)||(33490340-33490432)
chr1 (1-93)||(42310053-42310148)
chr1 (163-246)||(32981010-32981093)
chr1 (168-246)||(41971254-41971332)
chr1 (163-252)||(320668-320757)
chr1 (163-252)||(17446416-17446505)
chr1 (163-240)||(23314121-23314197)
chr1 (190-253)||(26159361-26159424)
chr1 (163-246)||(33490464-33490547)
chr1 (165-246)||(3830068-3830147)
chr1 (166-252)||(11957304-11957390)
chr1 (163-252)||(15209283-15209370)
chr1 (163-221)||(52753705-52753763)
chr1 (165-205)||(30558911-30558951)
chr1 (59-93)||(3829970-3830004)
chr1 (34-92)||(35908549-35908607)
chr1 (178-216)||(35948872-35948910)
chr1 (1-34)||(3829943-3829976)
chr1 (163-203)||(25017613-25017653)
chr1 (179-218)||(17875557-17875596)
chr1 (165-203)||(30055050-30055088)
chr1 (179-221)||(32885857-32885899)
chr1 (163-217)||(170346-170402)
chr1 (179-216)||(31867477-31867514)
chr1 (166-203)||(48606520-48606557)
chr1 (163-203)||(26272837-26272877)
chr1 (167-203)||(40864626-40864662)
chr1 (167-203)||(49465418-49465454)
[»] chr3 (35 HSPs)
chr3 (1-92)||(35514956-35515047)
chr3 (1-93)||(6268536-6268628)
chr3 (1-93)||(22967558-22967650)
chr3 (1-91)||(39772751-39772841)
chr3 (1-90)||(34083239-34083328)
chr3 (1-93)||(19391107-19391198)
chr3 (165-257)||(34083070-34083162)
chr3 (1-93)||(40080856-40080948)
chr3 (4-92)||(45183943-45184031)
chr3 (4-93)||(11017385-11017474)
chr3 (163-252)||(39772906-39772995)
chr3 (163-252)||(40080710-40080798)
chr3 (4-92)||(6930010-6930098)
chr3 (2-93)||(45336818-45336910)
chr3 (166-253)||(22967394-22967481)
chr3 (4-93)||(19564631-19564721)
chr3 (20-89)||(1185628-1185698)
chr3 (4-89)||(33041913-33041998)
chr3 (165-252)||(1185501-1185589)
chr3 (1-92)||(5136253-5136344)
chr3 (165-245)||(27936266-27936346)
chr3 (163-246)||(19564481-19564562)
chr3 (4-53)||(6502723-6502772)
chr3 (166-240)||(5136380-5136454)
chr3 (20-80)||(16094278-16094338)
chr3 (179-246)||(51817861-51817928)
chr3 (169-206)||(15668178-15668215)
chr3 (163-220)||(43137353-43137410)
chr3 (168-211)||(42964798-42964841)
chr3 (165-203)||(3856775-3856813)
chr3 (179-253)||(48757333-48757407)
chr3 (163-192)||(6268434-6268463)
chr3 (179-216)||(6891489-6891526)
chr3 (179-216)||(19269198-19269235)
chr3 (163-203)||(17073900-17073940)
[»] chr4 (77 HSPs)
chr4 (4-90)||(40530048-40530134)
chr4 (1-90)||(25931714-25931803)
chr4 (1-93)||(13013149-13013241)
chr4 (1-93)||(44157584-44157676)
chr4 (1-93)||(47501734-47501826)
chr4 (165-252)||(17510209-17510296)
chr4 (1-91)||(26438395-26438485)
chr4 (163-252)||(26438240-26438329)
chr4 (1-93)||(13390562-13390654)
chr4 (1-93)||(17510354-17510446)
chr4 (163-254)||(43357022-43357113)
chr4 (163-253)||(20130356-20130446)
chr4 (1-91)||(34406400-34406490)
chr4 (1-91)||(43356865-43356955)
chr4 (4-93)||(28876429-28876518)
chr4 (163-252)||(34406245-34406334)
chr4 (163-252)||(36381302-36381391)
chr4 (163-252)||(40530200-40530289)
chr4 (1-93)||(50204202-50204294)
chr4 (165-260)||(13390403-13390498)
chr4 (3-93)||(13398675-13398765)
chr4 (163-252)||(13013306-13013395)
chr4 (163-236)||(25931868-25931941)
chr4 (1-93)||(30076766-30076859)
chr4 (1-90)||(36381467-36381555)
chr4 (4-93)||(42332888-42332977)
chr4 (4-93)||(43142700-43142789)
chr4 (4-92)||(3292013-3292101)
chr4 (165-256)||(29319317-29319408)
chr4 (163-245)||(13398527-13398609)
chr4 (2-92)||(37577711-37577801)
chr4 (1-93)||(10352011-10352104)
chr4 (4-93)||(33135559-33135648)
chr4 (163-252)||(47501890-47501979)
chr4 (4-92)||(6689353-6689441)
chr4 (165-245)||(33135403-33135483)
chr4 (4-92)||(35546914-35547002)
chr4 (165-251)||(29994961-29995047)
chr4 (12-93)||(30110931-30111013)
chr4 (5-89)||(29995121-29995206)
chr4 (4-93)||(30215861-30215950)
chr4 (163-252)||(50204046-50204135)
chr4 (9-93)||(20130197-20130281)
chr4 (1-93)||(1818615-1818707)
chr4 (166-245)||(26449810-26449889)
chr4 (166-253)||(37577885-37577972)
chr4 (163-215)||(6236583-6236635)
chr4 (166-246)||(44157751-44157830)
chr4 (163-251)||(48131096-48131184)
chr4 (165-251)||(10351871-10351955)
chr4 (30-93)||(29319468-29319531)
chr4 (163-252)||(1818790-1818877)
chr4 (165-246)||(30076612-30076691)
chr4 (19-88)||(48130989-48131059)
chr4 (163-252)||(12211085-12211174)
chr4 (1-65)||(48130939-48131004)
chr4 (20-84)||(29132134-29132198)
chr4 (163-246)||(53692899-53692982)
chr4 (4-93)||(7769525-7769608)
chr4 (165-203)||(31002635-31002673)
chr4 (179-252)||(3239623-3239696)
chr4 (1-34)||(26449684-26449717)
chr4 (1-34)||(48990262-48990295)
chr4 (163-203)||(17359359-17359399)
chr4 (169-201)||(24104514-24104546)
chr4 (179-254)||(5516931-5517006)
chr4 (199-254)||(6689214-6689269)
chr4 (163-246)||(28876277-28876360)
chr4 (163-205)||(3074596-3074638)
chr4 (1-31)||(25931670-25931700)
chr4 (59-93)||(48990289-48990323)
chr4 (179-216)||(6211566-6211603)
chr4 (179-216)||(12679747-12679784)
chr4 (179-216)||(37236153-37236190)
chr4 (179-216)||(49908252-49908289)
chr4 (199-251)||(7769695-7769747)
chr4 (178-238)||(48991424-48991483)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1-93)||(479571-479663)
scaffold0002 (164-253)||(479417-479506)
scaffold0002 (163-203)||(435257-435297)
[»] chr8 (42 HSPs)
chr8 (1-93)||(24019505-24019597)
chr8 (1-93)||(28524159-28524251)
chr8 (1-93)||(39915475-39915567)
chr8 (1-93)||(40469982-40470075)
chr8 (163-246)||(29727351-29727434)
chr8 (4-93)||(3647906-3647995)
chr8 (163-252)||(28524312-28524401)
chr8 (4-93)||(29727499-29727588)
chr8 (4-93)||(34135920-34136009)
chr8 (2-93)||(7278987-7279078)
chr8 (163-254)||(29632502-29632593)
chr8 (163-254)||(39915628-39915719)
chr8 (163-253)||(27046930-27047020)
chr8 (163-252)||(24019355-24019444)
chr8 (1-93)||(36409444-36409536)
chr8 (1-72)||(9878180-9878251)
chr8 (4-93)||(4404971-4405060)
chr8 (4-93)||(16787140-16787229)
chr8 (4-93)||(3436196-3436286)
chr8 (4-93)||(23403031-23403120)
chr8 (165-241)||(3647754-3647829)
chr8 (1-90)||(15839233-15839326)
chr8 (163-246)||(40469866-40469949)
chr8 (163-251)||(3436320-3436408)
chr8 (165-252)||(23403188-23403275)
chr8 (163-253)||(36409616-36409704)
chr8 (166-252)||(7279154-7279240)
chr8 (163-216)||(15839401-15839454)
chr8 (163-208)||(42447151-42447196)
chr8 (163-252)||(24592196-24592285)
chr8 (163-252)||(21958739-21958830)
chr8 (165-252)||(42232021-42232108)
chr8 (179-252)||(5637567-5637640)
chr8 (163-204)||(28846832-28846873)
chr8 (163-203)||(24333944-24333984)
chr8 (59-93)||(2727965-2727999)
chr8 (4-34)||(2727993-2728023)
chr8 (4-34)||(42231900-42231930)
chr8 (59-93)||(42231924-42231958)
chr8 (179-216)||(17839572-17839609)
chr8 (166-203)||(27191001-27191038)
chr8 (163-203)||(10467978-10468018)
[»] scaffold0069 (2 HSPs)
scaffold0069 (163-252)||(18684-18773)
scaffold0069 (3-93)||(18522-18611)
[»] scaffold0154 (2 HSPs)
scaffold0154 (1-92)||(32175-32266)
scaffold0154 (163-252)||(32300-32388)
[»] scaffold0178 (2 HSPs)
scaffold0178 (185-251)||(21945-22011)
scaffold0178 (185-251)||(27447-27513)
[»] scaffold0015 (1 HSPs)
scaffold0015 (163-252)||(214018-214109)
[»] scaffold0019 (1 HSPs)
scaffold0019 (179-216)||(134747-134784)


Alignment Details
Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 253 - 387
Target Start/End: Complemental strand, 13802287 - 13802147
Alignment:
Q  253 ctcacagtaactgatatcataacaaaagaaaagaaatacatac------gaacaagaggaggaagaaactcttccttaaagctctggatgcatgaacgtg 346  Q
    |||| ||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13802287 ctcatagtaactgatatcataacaaaagaaaagaaatacatactctggagaacaagaggaggaagaaactcttccttaaagctctggatgcatgaacgtg 13802188  T
Q  347 gtcttgtaccgccaannnnnnnaatgaataaaagtctgtac 387  Q
    |||||||||||||||       |||||||||||||||||||    
T  13802187 gtcttgtaccgccaattttctgaatgaataaaagtctgtac 13802147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17444242 - 17444150
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  17444242 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtac 17444150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 31580942 - 31580852
Alignment:
Q  2 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  31580942 agaatacatgttatttaattacagggacaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgta 31580852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6403010 - 6402918
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  6403010 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 6402918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16406089 - 16406181
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  16406089 cagaatacatgttatttaattacatggtgaattttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtac 16406181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32126395 - 32126303
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  32126395 cagaatacatgttatttaattacggggtcaattttcagacttcacgtatattacgtgatcaatttcaattaataaccctattttaaactgtac 32126303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 35963651 - 35963742
Alignment:
Q  2 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||    
T  35963651 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgttgtcaatttcaattaataaccctattttaagttgtac 35963742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 41250839 - 41250750
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  41250839 cagaatacatgttatttaattacatggtcaattttcagacttcacgtatattacgtggttaatttcaattaataaccctattttaaattg 41250750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 42442948 - 42443037
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  42442948 aatacatgttatttaattacatggtccattttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtac 42443037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 42443099 - 42443188
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  42443099 tcgatttatgactgtttatatattatatcacatgtgaatttacgattaattttttgtccgaactccataaatttcctgactccgccactg 42443188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18982504 - 18982596
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||    
T  18982504 cagaatacatgttatttaattacagggtaaattttcagacttcacgtatattacgtggtaaatttcaattaataaccatattttaaattgtac 18982596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 771694 - 771785
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  771694 cagaatacatgttatttaattacatggtcaattttccgacttcacttatattacatggtcaatttcaattaataaccctattttaaattgta 771785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 6402857 - 6402767
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| ||||||    
T  6402857 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactgc 6402767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 17444076 - 17443986
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||| ||||||||| ||||||    
T  17444076 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccagactccataaatttgctggctccgccactgc 17443986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 16406240 - 16406326
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||| |||||    
T  16406240 atttatgactgtttatatattatatcacatgtgaatttacgattaattttttgtccggactccataaattttctgactccgccactg 16406326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 41250674 - 41250588
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||| ||||||||| |||||    
T  41250674 atttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaattttctggctccgccactg 41250588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 8058547 - 8058458
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||| |  ||||||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||    
T  8058547 aatacatgttatttaattacaagaccaattttcagacttcacatatattacatgatcaatttcaattaataatcctattttaaattgtac 8058458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 32126270 - 32126182
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||||| |||| |||||||||||||||  |||||||||||| ||||||||||||||||| ||||||||| ||||    
T  32126270 tcgatttatgactgtttatattttatatcacatgtgaatttagaattaattttttgcccgagctccataaattttctggctccgccact 32126182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 2287028 - 2287114
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| ||||| ||||    
T  2287028 gatttataactgtttatatagtatgtcacatgtgaatttatgattaattttttgcccgaactccataaatttcctgactccgccact 2287114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26238574 - 26238667
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaa-ttttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||| | |||||| |||||| |||||  ||||||||| || |||||||||||||||||||||||||||||||||||    
T  26238574 cagaatacatgttatttaattatatggtcaaattttcaaacttcgtgtatattacatggtcaatttcaattaataaccctattttaaattgtac 26238667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 31580776 - 31580687
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||| ||| ||||||||||||| ||||||||| |||||    
T  31580776 tcgatttatgattgtttatatattatgtcacatatgagtttatgattaattttttgcccgggctccataaattttctggctccgccactg 31580687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 45419545 - 45419633
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||| || ||||||| ||||||||| |||||||| || ||||||| ||||||||| ||||||||||||||||    
T  45419545 aatacatgttatttaattacatggccaatttttagacttcacatatattacatggtcaattttaattaataatcctattttaaattgta 45419633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 26161785 - 26161698
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||| | |||||||||||||| |||||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||| |||||    
T  26161785 gatttataattgtttatatattatctcacatgtgaatttgcgataaattttttgcccgggctccataaatttcctggctccgccactg 26161698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7071736 - 7071644
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaa-ttttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||  || |||||||||||||||||   |||||||||||||||    
T  7071736 cagaatacatgttatttaattatagggtcaatttttcagacttcacgtatatta-atggtcaatttcaattaataaatttattttaaattgtac 7071644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 17090312 - 17090231
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctc 244  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||| ||||||||| |||  ||||||||||||||||||||    
T  17090312 tcgatttatgactattgatatattatgtcatatgtgaatttacgataaattttttgcccggactccataaatttcctggctc 17090231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 26238700 - 26238789
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| |  ||||||| ||| ||||||||||||| ||||||||| |||||    
T  26238700 tcgatttatgactgtttatatattatgtcgcatgtgaatttgcgaatttttttttgcccgggctccataaattttctggctccgccactg 26238789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 35963799 - 35963888
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||| |  || ||||||||||||||||| ||||| |||||    
T  35963799 tcgatttatgattgtttatatattatatcgcatgtgaatttacgattaatttttcgctcgggctccataaatttcctgactccgccactg 35963888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 7071606 - 7071522
Alignment:
Q  168 ttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||| ||||||||||||||||||||| |||| || |||||| ||| ||||||||||||  |||||||||||||||    
T  7071606 ttatgactgtttatgtattatgtcacatgtgaatttgcgataaaatttttggccgggctccataaattctctggctccgacactg 7071522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 18982657 - 18982737
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||  ||||||||||||| ||| |||||    
T  18982657 atttatgactgtttatatattatgtcgcatgtgaatttacgatttattttttgcccaggctccataaattttctgactccg 18982737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2286867 - 2286949
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    ||||||||||||||||||||||||||||||||||||| |||||||       || || ||||||||||||||||||||||||||||||||    
T  2286867 cagaatacatgttatttaattacagggtcaattttcatacttcac-------acgtggtcaatttcaattaataaccctattttaaattg 2286949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 4554384 - 4554296
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||| ||   ||||||||||||||| |||||| ||||    
T  4554384 tcgatttatgactatttatatattatgtcacatctaaatttacgataaattttttgcccagactccataaatttcctagctccgccact 4554296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 8058393 - 8058317
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcct 239  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||| ||||||||| ||  ||||||||||||||||    
T  8058393 tcgatttatgactgttgatatattatgtaacatgtgaatttgcgataaattttttgcccaggctccataaatttcct 8058317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 17035801 - 17035724
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctg 240  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||| || |||||| |||  ||||||||||||||||    
T  17035801 tcgatttatgactattgatatattatgtcatatgtgaatttacgataaactttttgcccggactccataaatttcctg 17035724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 45122224 - 45122276
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttg 218  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  45122224 atttatgactgtttatatattatatcacatgtgaatttgcgataaattttttg 45122276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 772269 - 772334
Alignment:
Q  181 tatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||| ||| |||||||||| |||| | ||||||| ||| |||||||||||||||||||||||    
T  772269 tatattatttcatatgtgaatttgcgataatttttttgcccgggctccataaatttcctggctccg 772334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 26655759 - 26655720
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttg 218  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  26655759 tatatattatgtcacatgtgaatttacgataaattttttg 26655720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 31393022 - 31393065
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacg 206  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  31393022 tcgatttatgactatttatatattatgtcacatgtaaatttacg 31393065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 35649607 - 35649540
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||||||||||||||| ||||||| |||||| || | ||| ||||| || |||||||||    
T  35649607 tatatattatgtcacatgtgaatttgcgattaaatttttgcccaaactctataaaatttctggctccg 35649540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 42477583 - 42477650
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||||||||||||||| | || | |||||||||| | ||| ||||| ||||||||||||    
T  42477583 tatatattatgtcacatgtgaatttgcaataatttttttgtccaaactctataaaattcctggctccg 42477650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 40653837 - 40653800
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40653837 tatatattatgtcacatgtgaatttacgataaattttt 40653800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 4554463 - 4554419
Alignment:
Q  48 atattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||| || ||||||||||||||||||| ||||||||||||||    
T  4554463 atattacatggtcaatttcaattaataaccatattttaaattgta 4554419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 18425886 - 18425814
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||||||||| |||| | ||||||| || || || ||||| |||||| ||||| ||||    
T  18425886 tatatattatgtcacatgtgaatttgcgataatttttttgcccaagttctataaaattcctgactccgccact 18425814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 19951780 - 19951740
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  19951780 tcgatttatgactatttatatattatgttacatgtgaattt 19951740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 26161880 - 26161848
Alignment:
Q  61 aatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||    
T  26161880 aatttcaattaataaccctattttaaattgtac 26161848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 12755873 - 12755831
Alignment:
Q  210 aattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||| | ||||||||||||||||||||||||||| |||||    
T  12755873 aatttttcgcccgagctccataaatttcctggctccgccactg 12755831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 45261791 - 45261753
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  45261791 gatttatgactatttatatattatatcacatgtgaattt 45261753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 12756042 - 12755993
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatatta 53  Q
    ||||||||||||||||||||| ||  |||||||||||||| | |||||||    
T  12756042 aatacatgttatttaattacatggctaattttcagacttcgcatatatta 12755993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26161909 - 26161876
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattt 34  Q
    |||||||||||||||||||||||||||| |||||    
T  26161909 cagaatacatgttatttaattacagggtgaattt 26161876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 33453134 - 33453094
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttac 205  Q
    ||||||||| | |||||||||||| ||||||||||||||||    
T  33453134 gatttatgattatttatatattatctcacatgtgaatttac 33453094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 42755643 - 42755571
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    |||||||||| |||||||||||||| |||| ||||||| | ||  |||| ||| | |||||||||||| ||||    
T  42755643 tatatattatatcacatgtgaatttgcgataaatttttcgcccaggctctatataattcctggctccgccact 42755571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 5e-41; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 1775420 - 1775331
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1775420 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgggctccataaatttcctggctccgacactg 1775331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 39656733 - 39656643
Alignment:
Q  2 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  39656733 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgta 39656643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16155851 - 16155943
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  16155851 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattatgtggtcaatttcaattaataaccctattttaaattgtac 16155943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 16333104 - 16333016
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  16333104 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgta 16333016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19986404 - 19986496
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  19986404 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataatcctattttaaattgtac 19986496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26282524 - 26282432
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  26282524 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 26282432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36292827 - 36292735
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||||||||    
T  36292827 cagaatacatgttatttaattacagggtcaattttcagacttcaagtatattacgtggttaatttcaattaataaccctattttaaattgtac 36292735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 39435828 - 39435917
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgct 254  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  39435828 gatttatgactgtttatatattatttcacatgtgaatttacgattaattttttgcccgggctccataaatttcctggctccgccactgct 39435917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10036867 - 10036959
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||    
T  10036867 cagaatacatgttatttaattacagggtgaattttcagacttcacatgtattacgtggtcaatttcaattaataaccctattttaaattgtac 10036959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 13818938 - 13819029
Alignment:
Q  2 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  13818938 agaatacatgttatttaattacatggtcaatttttagacttcacgtatattacgtagtcaatttcaattaataaccctattttaaattgtac 13819029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 13819090 - 13819173
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  13819090 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgggctccataaatttcctgactccg 13819173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 39435669 - 39435752
Alignment:
Q  10 tgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  39435669 tgttatttaattacagggacaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtac 39435752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 26282370 - 26282281
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  26282370 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactg 26282281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 36292662 - 36292573
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  36292662 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgccccggctccataaatttcctggctccgccactg 36292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 16332957 - 16332874
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  16332957 tcgatttatgactgtttatatattatattacatgtgaatttacgattaattttttgcccgggctccataaatttcctggctccg 16332874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 39656572 - 39656489
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  39656572 tcgatttatgactgtttatatattatatcacatgtgaatttaagattaattttttgcccgagctccataaattttctggctccg 39656489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 28801837 - 28801927
Alignment:
Q  4 aatacatgttatttaattacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||    
T  28801837 aatacatgttatttaattacaaggtcaatttttcagacttcacgtatattacgtgatcaatttcaattaaaaaccctattttaaattgtac 28801927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 17331200 - 17331111
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  17331200 aatacatgttatttaattacagagtcaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtac 17331111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 10037029 - 10037109
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  10037029 atttatgactgtttatatattatatcacatgtgaatttatgattaattttttgcccgggctccataaatttcctggctccg 10037109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31500924 - 31500832
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||| | |||||||||||||||||    
T  31500924 cagagtacatgttatttaattacagggccaattttcagacttcacgtatattacatggtcaacttcaattaattatcctattttaaattgtac 31500832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 16156021 - 16156113
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttt---gtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||| |||||    
T  16156021 tcgatttgtgattgtttatatattatgtcacatgtgaatttacgattaattttttaccgtccgggctccataaatttcctggctccgccactg 16156113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36292314 - 36292408
Alignment:
Q  1 cagaatacatgttatttaatt-acagggtcaattttcagacttcacgtatattac-ttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  36292314 cagaatacatgtgatttaatttacagggtcaattttcaaacttcacgtatattacattggtcaatttcaattaataaccttattttaaattgtac 36292408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 12278059 - 12277970
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  12278059 aatacatgttatttaattacaaggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtac 12277970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 19986571 - 19986660
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||  |||||||||||||||||||||| |||||    
T  19986571 tcgatttatgactgtttatatattatgtcaagtgtgaatttaagattaattttttgcccggactccataaatttcctggctccgccactg 19986660  T

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Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 1775575 - 1775496
Alignment:
Q  11 gttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||    
T  1775575 gttatttaattacaggttcaattttcagacttcacgtatattacgtggtcaatttcaatcaataaccatattttaaattg 1775496  T

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Target: chr5; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 31681329 - 31681414
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaatt 89  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||    
T  31681329 aatacatgttatttaattacaaggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaatt 31681414  T

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Target: chr5; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 33431283 - 33431368
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaatt 89  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||    
T  33431283 aatacatgttatttaattacaaggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaatt 33431368  T

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Target: chr5; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 31500763 - 31500675
Alignment:
Q  164 cgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||| ||  |||||||||||||||||||||| |||||    
T  31500763 cgatttatgactgttgatatactatgtcacatgtgaatttgcgataaattttttgttcggactccataaatttcctggctccggcactg 31500675  T

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Target: chr5; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 28801963 - 28802042
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctcc 245  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||||| |||||||    
T  28801963 atttatgactgtttatatattatgtcgcatgtgaatttgcgattaattttttgcccggactccataaatttcttggctcc 28802042  T

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Target: chr5; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43069802 - 43069898
Alignment:
Q  1 cagaatacatgttatttaatt-acagggtcaattttcagac---ttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||| |||| |||||||| ||| |||||||||||||||   |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  43069802 cagaatatatgtgatttaatttacaaggtcaattttcagacgacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtac 43069898  T

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Target: chr5; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 43069977 - 43070063
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||| ||||||| | ||| ||||||||||||||||||||||| ||||    
T  43069977 tcgatttatgactgtttatatatt--gtcacgtgtgaatttacgataaatttttcgcccgggctccataaatttcctggctccgccact 43070063  T

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Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15959152 - 15959080
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaa 72  Q
    |||||||||| ||||||||||||||||| |||||| |||||||| |||||||||| || ||||||||||||||    
T  15959152 cagaatacatattatttaattacagggttaatttttcagacttcgcgtatattacatggtcaatttcaattaa 15959080  T

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Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 192764 - 192835
Alignment:
Q  10 tgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctat 81  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||  | ||||||||||| | |||||||||    
T  192764 tgttatttaattacagggttaattttcagactttacgtatattacaaggtcaatttcaataagtaaccctat 192835  T

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Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 37255625 - 37255683
Alignment:
Q  34 ttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||| || ||||||| ||||||||| ||||||||||||||||    
T  37255625 ttcagacttcacgtatattacatggtcaattttaattaataatcctattttaaattgta 37255683  T

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Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 36292492 - 36292571
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||||||||||||  |||| ||||||||||  ||| ||||||| | |||  ||||||||||||||||||||||    
T  36292492 gatttatgactgtttatatatt--gtcaaatgtgaatttgggataaatttttcgcccggactccataaatttcctggctccg 36292571  T

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Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 192858 - 192910
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttt 217  Q
    ||||||||| |||||||||||||||| |||||||||||| |||| ||||||||    
T  192858 gatttatgattgtttatatattatgttacatgtgaatttgcgataaatttttt 192910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 1280808 - 1280848
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  1280808 tcgatttatgactatttatatattatgtcacatgtgaattt 1280848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 3055709 - 3055792
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||| |||||||||||| |  ||||||||||| |||| ||  |||||||| ||||| ||||| ||||| ||||||    
T  3055709 tcgatttatgactatttatatattatatagcatgtgaatttgcgatcaaaattttgtccaagctcgataaaattcctagctccg 3055792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 14317129 - 14317196
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||  |||| ||| | ||||||||||||    
T  14317129 tatatattatgtcacatgtgaatttgcgataaatttttcgtccaggctctatataattcctggctccg 14317196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 204094 - 204132
Alignment:
Q  178 ttatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  204094 ttatatattatgtcacatgtgaatttacgataaattttt 204132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 2985846 - 2985919
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||| ||||||||||||||||||| ||||||| | ||  |||| ||| | |||||||||||| |||||    
T  2985846 tatatattatttcacatgtgaatttacgataaatttttcgcccaggctctatataattcctggctccgccactg 2985919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 27168751 - 27168711
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  27168751 tcgatttatgactatttatatattatgtcaaatgtgaattt 27168711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 4306746 - 4306709
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  4306746 tatatattatgtcacatgtgaatttgcgataaattttt 4306709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 15497520 - 15497483
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  15497520 tatatattatgtcacatgtgaatttgcgataaattttt 15497483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 12098091 - 12098059
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaa 211  Q
    |||||||||||||||||||||||||||| ||||    
T  12098091 tatatattatgtcacatgtgaatttacggttaa 12098059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 17331012 - 17330968
Alignment:
Q  210 aattttttgtccgagctccataaatttcctggctccgacactgct 254  Q
    ||||||| | ||| ||||||||||||||||||||||| |||||||    
T  17331012 aatttttcgcccgggctccataaatttcctggctccgccactgct 17330968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5556422 - 5556514
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  5556422 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtac 5556514  T

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Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 36631776 - 36631865
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  36631776 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattg 36631865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34468541 - 34468449
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  34468541 cagaatacatgttatttaattacaaggtcaattttcagacttcacgtatattacgtgatcaatttcaattaataaccctattttaaattgtac 34468449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 36631941 - 36632030
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  36631941 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgggctccataaatttcctggctccgccactg 36632030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 3113326 - 3113237
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  3113326 aatacatgttatttgattacagggtcaattttcagacttcacgtatattacgttgtcaatttcaattaataaccctattttaaattgtac 3113237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 14775802 - 14775710
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  14775802 cagaatgcatgttatttaattacaggatcaattttcagacttcacgtatattacgtgattaatttcaattaataaccctattttaaattgtac 14775710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15226255 - 15226163
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  15226255 cagaatgcatgttatttaattacaggatcaattttcagacttcacgtatattacgtgattaatttcaattaataaccctattttaaattgtac 15226163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8395084 - 8395173
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||    
T  8395084 cagaatacatgttatttaattacatggtcaattttcagacttcacgtatattgcgtggtcaatttcaattaataaacctattttaaattg 8395173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7003586 - 7003678
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||||    
T  7003586 cagaatatatgttatttaattatagggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcatattttaaattgtac 7003678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7049457 - 7049549
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||||    
T  7049457 cagaatatatgttatttaattatagggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcatattttaaattgtac 7049549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 8395290 - 8395373
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||||||||    
T  8395290 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccggcctccataaattttctggctccg 8395373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 34468413 - 34468333
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  34468413 atttatgactgtttatatattatatcacatgtgaatttaggattaattttttgcccgggctccataaatttcctggctccg 34468333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 3113178 - 3113088
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||||| ||||||||| ||||||    
T  3113178 tcgatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccgaactccataaattttctggctccgccactgc 3113088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 14775636 - 14775547
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  14775636 tcgatttatgactatttatatattatgtcatatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactg 14775547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 15226089 - 15226000
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  15226089 tcgatttatgactatttatatattatgtcatatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactg 15226000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 26625707 - 26625796
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||| ||||||||| ||||||| |||||||||    
T  26625707 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctatttgaaattgtac 26625796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 38637586 - 38637497
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||| | ||||||| |||||||||||||||||    
T  38637586 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttatttaataatcctattttaaattgtac 38637497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 43183673 - 43183585
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| ||||||||| ||||||||||||||||    
T  43183673 aatacatgttatttaattacatggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgta 43183585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 8866935 - 8866846
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||| || ||||||| ||||||||| | |||||||||||||||    
T  8866935 aatacatgttatttaattacagagccaattttcagacttcacatatattacgtggtcaattttaattaataatcttattttaaattgtac 8866846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 37001443 - 37001354
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||  |  ||||||| ||||||||| |||||||||||||||||    
T  37001443 aatacatgttatttaattacagggccaattttcagacttcacatatattatattgtcaattttaattaataatcctattttaaattgtac 37001354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 11019655 - 11019574
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||||||||||||||||  ||| | | ||||| ||| ||||||||||||| |||||||||    
T  11019655 gatttatgactgtttatatattatgtcacatgtgaatttgtgataattgttttgcccgggctccataaattttctggctccg 11019574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 33686646 - 33686733
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||| ||||||||| |||| ||| |||||||||| |||| |||||||||||||| |||||||||||| || |||||| |||||    
T  33686646 gatttatgattgtttatatgttatctcatatgtgaatttgcgataaattttttgtccgaactccataaattttctagctccgtcactg 33686733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 36659284 - 36659374
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgat-taattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||  ||||||||| |||  || ||| ||||||||||||||| |||||    
T  36659284 tcgatttatgaccgttgatatattatgtcacatgtgaattttcgataaaattttttgcccggactacatcaatttcctggctccgccactg 36659374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 7003747 - 7003836
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| |||| ||||||||| ||||||||||||||  || |  ||||||| ||| ||||||||||||||||| ||||| |||||    
T  7003747 tcgatttatgaatgttgatatattatatcacatgtgaatttgagaatttttttttgcccgggctccataaatttcctgactccgccactg 7003836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 7049618 - 7049707
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| |||| ||||||||| ||||||||||||||  || |  ||||||| ||| ||||||||||||||||| ||||| |||||    
T  7049618 tcgatttatgaatgttgatatattatatcacatgtgaatttgagaatttttttttgcccgggctccataaatttcctgactccgccactg 7049707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36659128 - 36659181
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattac 54  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  36659128 cagaatacatgttatttaattacagggccaattgtgagacttcacgtatattac 36659181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 26493643 - 26493570
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||| ||||||| | || | ||| |||||||| ||| ||||| |||||    
T  26493643 tatatattatgtcacatgtgaatttacgataaatttttcgcccaaactctataaatttactgactccgccactg 26493570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 9230628 - 9230666
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  9230628 gatttatgactatttatatattatgtcacatgtgaattt 9230666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 11019738 - 11019704
Alignment:
Q  59 tcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||    
T  11019738 tcaatttcaattaataaccctattttaaattgtac 11019704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 18375630 - 18375666
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtga 199  Q
    ||||||||||||| |||||||||||||||||||||||    
T  18375630 tcgatttatgactatttatatattatgtcacatgtga 18375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 47729950 - 47729993
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacg 206  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||    
T  47729950 tcgatttatgattatttatatattatgtcacatttgaatttacg 47729993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 19400209 - 19400298
Alignment:
Q  165 gatttatgactgtttata--tattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| ||||||  ||||||||||||| ||||||| |||| || |||||| ||  |||| ||||| || ||||||||| |||||    
T  19400209 gatttatgactatttatatatattatgtcacatatgaatttgcgataaactttttgcccaggctctataaaatttctggctccgccactg 19400298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22937774 - 22937737
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  22937774 tatatattatgtcacatgtgaatttgcgataaattttt 22937737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 25491579 - 25491542
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaattt 203  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  25491579 atttatgactatttatatattatgtcacatgtaaattt 25491542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 37966212 - 37966175
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  37966212 tatatattatgtcacatgtgaatttgcgataaattttt 37966175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 38826096 - 38826059
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  38826096 tatatattatgtcacatgtgaatttgcgataaattttt 38826059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 45197886 - 45197923
Alignment:
Q  181 tatattatgtcacatgtgaatttacgattaattttttg 218  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  45197886 tatattatgtcacatgtgaatttgcgataaattttttg 45197923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34948033 - 34947941
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  34948033 cagaatacatgttatttaattacatggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtac 34947941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 13838760 - 13838850
Alignment:
Q  2 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  13838760 agaatacatgttatttaattacatggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgta 13838850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 399578 - 399670
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  399578 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 399670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33228559 - 33228466
Alignment:
Q  1 cagaatacatgttatttaatt-acagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  33228559 cagaatacatgtgatttaatttacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtac 33228466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 399731 - 399819
Alignment:
Q  164 cgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | || |||||||||||||||||||||||| |||||    
T  399731 cgatttatgactgtttatatattatatcacatgtgaatttacgattaatttttcgcccaagctccataaatttcctggctccgccactg 399819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29744229 - 29744322
Alignment:
Q  1 cagaatacatgttatttaatt-acagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  29744229 cagaatacatgtgatttaatttacaaggtcaattttcagacttcacgtatattacatggtcaatctcaattaataaccctattttaaattgtac 29744322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 34947882 - 34947799
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  34947882 tcgatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccgggctccataaatttcctggctccg 34947799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 28997692 - 28997777
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaatt 89  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||    
T  28997692 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaatt 28997777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31028162 - 31028069
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||| || |||||||||||||||| || |||||||||||||||    
T  31028162 cagaatacatattatttaattacagcgtcgatttttcagacttcacgtatattacatggtcaatttcaattaatagccatattttaaattgtac 31028069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34253092 - 34253182
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||  ||| ||| | ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  34253092 cagaatacatgtt--ttatttaaatggtcaattttcagacttcacgtatattacgtgattaatttcaattaataaccctattttaaattgtac 34253182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 29744393 - 29744478
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||  |||||||||||| || | || ||||||| | ||| ||||||||||||||||||||||| |||||    
T  29744393 gatttatgactgtttatatatt--gtcacatgtgaagttgcaataaatttttcgcccgggctccataaatttcctggctccgccactg 29744478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 34253232 - 34253314
Alignment:
Q  168 ttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||  | ||  |||| |||||||||||||||| ||||    
T  34253232 ttataactatttatatattatgtcacatgtgaatttacaattaattttttacctga-atccacaaatttcctggctccgccact 34253314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 33228385 - 33228298
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||  |||||| |||||||||| ||| |||| || | | | | ||||||||||||||||||||| |||||    
T  33228385 tcgatttatgactgtttatatat--tgtcacgtgtgaatttatgataaattgttcgcctgggatccataaatttcctggctccgccactg 33228298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 24074656 - 24074711
Alignment:
Q  178 ttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaa 233  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||    
T  24074656 ttatatattatgtcacatgtgaatttacgataaatttttcgcccgggctctataaa 24074711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 11971188 - 11971226
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  11971188 gatttatgactatttatatattatgtcacatgtgaattt 11971226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 32441922 - 32441882
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  32441922 tcgatttatgactatttatatattatgtcgcatgtgaattt 32441882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 30621394 - 30621437
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgat 208  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  30621394 gatttatgactatttatatattatgtcgcatgtgaatttgcgat 30621437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 12180468 - 12180430
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaat 201  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  12180468 tcgatttatgactatttatatattatgtcgcatgtgaat 12180430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 3051108 - 3051145
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  3051108 tatatattatgtcacatgtgaatttgcgataaattttt 3051145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 34385077 - 34385040
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  34385077 tatatattatgtcacatgtgaatttgcgataaattttt 34385040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 25599382 - 25599422
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| ||||||||| ||||| |||||||||||    
T  25599382 tcgatttatgactatttatatatcatgtcgcatgtgaattt 25599422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23313954 - 23314046
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  23313954 cagaatacatgttatttaattacatggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattgtac 23314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15209496 - 15209403
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  15209496 cagaatacatgttatttaattacagggtcaatttttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtac 15209403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 42309984 - 42309899
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  42309984 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccaagctccataaatttcctggctccgccact 42309899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 17446253 - 17446342
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||    
T  17446253 cagaatacatgttatttaattacatggccaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattg 17446342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11957565 - 11957473
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||    
T  11957565 cagaatacatgttatttaattgcagggttaattttcagacttcacatatattacatggtcaatttcaattaataatcctattttaaattgtac 11957473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32981265 - 32981173
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||   | |||||||||||||||||||||||||||||||||||    
T  32981265 cagaatacatgttatttaattacatggtcaattttcagacatcacgtatattaggcggtcaatttcaattaataaccctattttaaattgtac 32981173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 7434532 - 7434622
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||    
T  7434532 tcgatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccgggctccataaatttcctggctccgccactgc 7434622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 7434390 - 7434471
Alignment:
Q  9 atgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  7434390 atgttatttaattacatggtcaattttcagacttcacgtatattacgttgtcaatttcaattaataaccctattttaaattg 7434471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41971463 - 41971370
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  || |||||||||||||| ||||||||||||||||||||    
T  41971463 cagaatacatgttatttaattacagggtcaatttttcaggcttcacgtatattatatggtcaatttcaattaacaaccctattttaaattgtac 41971370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 33490340 - 33490432
Alignment:
Q  2 agaatacatgttatttaattacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||| || ||||||| || |||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  33490340 agaatacatgttatttaattacatgggcaatttttcatacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtac 33490432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 42310148 - 42310053
Alignment:
Q  1 cagaatacatgttatttaattacag---ggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||||||||| || ||||||||||||||||| | |||||||||||||||    
T  42310148 cagaatacatgttatttaattacagcagggtcaattttcagacttcatgtatattacgtggtcaatttcaattaataatcatattttaaattgtac 42310053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 32981093 - 32981010
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||| ||||    
T  32981093 tcgatttatgactatttatatattatgtcacatgtgaatttacgattaattttttgctcggactccataaatttcctggttccg 32981010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 41971332 - 41971254
Alignment:
Q  168 ttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |  ||||||||||||||||||||||    
T  41971332 ttatgactgtttatatattatgtcacatgtgaatttgcgataaattttttgtctggactccataaatttcctggctccg 41971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 320757 - 320668
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||  | |||||| ||| ||||||||||||||||||||||| |||||    
T  320757 tcgatttatgactgattatatattatgtcacatgtgaatttgcgatacaatttttgcccgggctccataaatttcctggctccgccactg 320668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 17446416 - 17446505
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||  || ||||||||||||||||| ||||| |||||    
T  17446416 tcgatttatgactgttgatatattatgtcacatgtgaatttgcgataaattatttgctcgggctccataaatttcctgactccgccactg 17446505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 23314121 - 23314197
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctg 240  Q
    ||||||||||||||||||||||| || | |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23314121 tcgatttatgactgtttatatataatattacatgtgaatttacgattaattatttgtccg-gctccataaatttcctg 23314197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 26159361 - 26159424
Alignment:
Q  190 tcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    ||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| ||||||    
T  26159361 tcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactgc 26159424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 33490464 - 33490547
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||| ||||||||||||||| ||||||||||| | || |||| |||| |||| | ||||||||||||| ||||||    
T  33490464 tcgatttatgactatttatatattatgtcgcatgtgaatttgctataaattatttgcccgaacaccataaatttcctagctccg 33490547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 3830068 - 3830147
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||  ||||||||||||| | |  ||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  3830068 gatttatgatcgtttatatattatctga--tgtgaatttgcgataaattttttgcccgagctccataaatttcctggctccg 3830147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 11957390 - 11957304
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||| |||||||||||||| ||| ||||| |||| ||||||||| || | || ||||||||| ||||||||| |||||    
T  11957390 atttatgactgttgatatattatgtcacgtgttaatttgcgataaattttttgcccaaacttcataaattttctggctccgccactg 11957304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 15209370 - 15209283
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||  |||||||||||||||||||||||||| || | || ||||||  || |||||||||||||| |||||||| |||||    
T  15209370 tcgatttatgact--ttatatattatgtcacatgtgaatttgcgttaaaatttttgctcgggctccataaatttcttggctccgccactg 15209283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 52753763 - 52753705
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtcc 221  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||  ||||||||    
T  52753763 tcgatttatgactatttatatattatgtcgcatgtgaatttacgatcaaaattttgtcc 52753705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 30558951 - 30558911
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttac 205  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  30558951 gatttatgactatttatatattatgtcacatgtgaatttac 30558911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 3829970 - 3830004
Alignment:
Q  59 tcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||    
T  3829970 tcaatttcaattaataaccctattttaaattgtac 3830004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 35908549 - 35908607
Alignment:
Q  34 ttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    |||||||||||| |||||||| |  ||||||| ||||||||| ||||||||||||||||    
T  35908549 ttcagacttcacatatattacattgtcaattttaattaataatcctattttaaattgta 35908607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 35948910 - 35948872
Alignment:
Q  178 ttatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  35948910 ttatatattatgtcacatgtgaatttacgataaattttt 35948872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3829943 - 3829976
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  3829943 cagaatacatgttatttaattacagggtcaattt 3829976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 25017613 - 25017653
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  25017613 tcgatttatgactatttatatattatgtcacatgtaaattt 25017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 17875557 - 17875596
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttg 218  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  17875557 tatatattatgtcacatgtgaatttgcgataaattttttg 17875596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 30055050 - 30055088
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  30055050 gatttatgactatttatatattatgtcatatgtgaattt 30055088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 32885899 - 32885857
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtcc 221  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||    
T  32885899 tatatattatgtcacatgtgaatttgcgataaatttttcgtcc 32885857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 170402 - 170346
Alignment:
Q  163 tcgatttatgactgtttatatat--tatgtcacatgtgaatttacgattaatttttt 217  Q
    ||||||||||||| |||||||||  |||||||||||| ||||| |||| ||||||||    
T  170402 tcgatttatgactatttatatatattatgtcacatgtaaatttgcgataaatttttt 170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 31867477 - 31867514
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  31867477 tatatattatgtcacatgtgaatttgcgataaattttt 31867514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 48606557 - 48606520
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaattt 203  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  48606557 atttatgactatttatatattatgttacatgtgaattt 48606520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 26272877 - 26272837
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| ||||||||| ||||||||||| |||||    
T  26272877 tcgatttatgactatttatatatcatgtcacatgtaaattt 26272837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 40864662 - 40864626
Alignment:
Q  167 tttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  40864662 tttatgactatttatatattatgtcacatgtaaattt 40864626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 49465454 - 49465418
Alignment:
Q  167 tttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  49465454 tttatgactatttatatattatgtcgcatgtgaattt 49465418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35514956 - 35515047
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  35514956 cagaatacatgttatttaattacagggtaaattttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgta 35515047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6268628 - 6268536
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  6268628 cagaatacatgttatttaattacaaggtcaattttcagacttcacgtatattacgtggttaatttcaattaataaccctattttaaattgtac 6268536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22967650 - 22967558
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  22967650 cagaatacatgttatttaattacagggtcaattttcaaacttcacgtatattacgtggttaatttcaattaataaccctattttaaattgtac 22967558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 39772751 - 39772841
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgt 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||    
T  39772751 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgt 39772841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34083328 - 34083239
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||||||||||||||||||    
T  34083328 cagaatacatgttatttaattacagggtcaattttcagagttcaagtatattacgtggtcaatttcaattaataaccctattttaaattg 34083239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19391107 - 19391198
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||||||    
T  19391107 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcagttaataa-cctattttaaattgtac 19391198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 34083162 - 34083070
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgctcac 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||| |||||| ||||||||||    
T  34083162 gatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttttcccggactccataaatttcctagctccgccactgctcac 34083070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 40080948 - 40080856
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  40080948 cagaatatatgttatttaattatatggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccttattttaaattgtac 40080856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 45183943 - 45184031
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||| ||||||||| ||||||||||||||||    
T  45183943 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgta 45184031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 11017474 - 11017385
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || || |||| ||||||||| |||||||||||||||||    
T  11017474 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcgattttaattaataatcctattttaaattgtac 11017385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 39772906 - 39772995
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||| |||||| |||||    
T  39772906 tcgatttatgattgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctagctccgccactg 39772995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 40080798 - 40080710
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||    
T  40080798 tcgatttatgattatttatatattatgtcacatgtgaatttacgtttaattttttgcccg-gctccataaatttcctggctccgccactg 40080710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 6930098 - 6930010
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||| || | ||||| ||||||||| ||||||||||||||||    
T  6930098 aatacatgttatttaattacagggtcaattttcagacttcacacatattacatggtaaattttaattaataatcctattttaaattgta 6930010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 45336818 - 45336910
Alignment:
Q  2 agaatacatgttatttaatt-acagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||| |||||||| ||| ||| | ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  45336818 agaatacatgtgatttaatttacaaggttacttttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtac 45336910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 166 - 253
Target Start/End: Complemental strand, 22967481 - 22967394
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||  ||||||||||||||||||||||| ||||||    
T  22967481 atttacgactgtttatatattatgtcacatgtgagtttacgattaatttttcgcccaggctccataaatttcctggctccgccactgc 22967394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 19564721 - 19564631
Alignment:
Q  4 aatacatgttatttaatt-acagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||    
T  19564721 aatacatgtgatttaattcacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataaccatattttacattgtac 19564631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 1185698 - 1185628
Alignment:
Q  20 ttacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaatt 89  Q
    |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  1185698 ttacagggtcaatttttcagacttcacgtatattacatggtcaatttcaattaataaccctattttaaatt 1185628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 33041913 - 33041998
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaatt 89  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| |  ||||||| ||||||||| ||||||| |||||    
T  33041913 aatacatgttatttaattacagggccaattttcagacttcacatatattacatagtcaattttaattaataatcctatttaaaatt 33041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 1185589 - 1185501
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtg-aatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||  || ||||||||| ||||||||| |||||    
T  1185589 gatttatgactgtttatatattatgtcacatgtgaaatttacgataaattttttgcccggacttcataaattttctggctccgccactg 1185501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5136253 - 5136344
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||| | | |||||||||||||||| ||||||||||||||||    
T  5136253 cagaagacacgttatttaattacagggtcaatttttcagatttcacgtatattacatat-caatttcaattaataatcctattttaaattgta 5136344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 27936266 - 27936346
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctcc 245  Q
    ||||||||| |||||||||||||| |||||||||||||| |||| ||||||||| |||| ||||||||||||||| |||||    
T  27936266 gatttatgattgtttatatattatctcacatgtgaatttgcgataaattttttgcccgaactccataaatttccttgctcc 27936346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 19564562 - 19564481
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||||||||||||||  ||||||| |||| || |||| ||||||| | ||||||||||||||||||||| |||||    
T  19564562 tcgatttatgactgtttatatatt--gtcacatttgaagttgcgataaatttttcgcccgagctccataaatttcctgactccg 19564481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 6502772 - 6502723
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatatta 53  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  6502772 aatacatgtaatttaattacagggccaattttcagacttcacgtatatta 6502723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 5136380 - 5136454
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctg 240  Q
    |||||||||||||||||||||| ||||||||||||||| | || | |||||||||  ||||  ||||||||||||    
T  5136380 atttatgactgtttatatattacgtcacatgtgaatttgcaataatttttttgtctaagctatataaatttcctg 5136454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 16094338 - 16094278
Alignment:
Q  20 ttacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataacccta 80  Q
    |||||||||||||||||||||||| | ||||||||| | ||||||||||| | ||||||||    
T  16094338 ttacagggtcaattttcagacttcgcatatattactgggtcaatttcaataattaacccta 16094278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 51817928 - 51817861
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||||||||||||||| |||||||||||| ||||  |||| ||  | ||||||||||||    
T  51817928 tatatattatgtcacatgtgaatttgcgattaatttttcgtccaggctctatgtaattcctggctccg 51817861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 15668178 - 15668215
Alignment:
Q  169 tatgactgtttatatattatgtcacatgtgaatttacg 206  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  15668178 tatgactatttatatattatgtcacatgtgaatttacg 15668215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 43137353 - 43137410
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtc 220  Q
    ||||||||||||| || |||||||||||||||||||||||| || ||||  |||||||    
T  43137353 tcgatttatgactattcatatattatgtcacatgtgaatttgcggttaaaattttgtc 43137410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 42964841 - 42964798
Alignment:
Q  168 ttatgactgtttatatattatgtcacatgtgaatttacgattaa 211  Q
    |||||||  |||||||||||||||||||||||||||||| ||||    
T  42964841 ttatgacaatttatatattatgtcacatgtgaatttacggttaa 42964798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 3856813 - 3856775
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  3856813 gatttataactatttatatattatgtcacatgtgaattt 3856775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 48757407 - 48757333
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    ||||||||||||||||||||||||| |||| ||||||| | ||  |||| ||  | |||||||||||| ||||||    
T  48757407 tatatattatgtcacatgtgaatttgcgataaatttttcgcccaggctctatgtaattcctggctccgccactgc 48757333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 192
Target Start/End: Complemental strand, 6268463 - 6268434
Alignment:
Q  163 tcgatttatgactgtttatatattatgtca 192  Q
    ||||||||||||||||||||||||||||||    
T  6268463 tcgatttatgactgtttatatattatgtca 6268434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 6891489 - 6891526
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  6891489 tatatattatgtcacatgtgaatttgcgataaattttt 6891526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 19269235 - 19269198
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  19269235 tatatattatgtcacatgtgaatttgcgataaattttt 19269198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 17073940 - 17073900
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||| ||||| ||||||||||||||||||| |||||||    
T  17073940 tcgatttttgactatttatatattatgtcacatatgaattt 17073900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 40530048 - 40530134
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  40530048 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctattttaaattg 40530134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25931714 - 25931803
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||    
T  25931714 cagaatacatgttatttaattacagggtcaattttcagacttcatgtatattacgtggtcaatttcaattaataaccctattttaaattg 25931803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13013149 - 13013241
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  13013149 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 13013241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44157584 - 44157676
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||||    
T  44157584 cagaatacatgttatttaattacagggtcaattttcagacttcacgcatattacatgatcaatttcaattaataatcctattttaaattgtac 44157676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 47501734 - 47501826
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  47501734 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 47501826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 17510296 - 17510209
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  17510296 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgtgctccataaatttcctggctccgccactg 17510209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26438485 - 26438395
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgt 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||    
T  26438485 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgt 26438395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 26438329 - 26438240
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||    
T  26438329 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccaggctccataaatttcctggctccgccactg 26438240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13390654 - 13390562
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  13390654 cagaatacatgttatttaattacagggccaattttcaaacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgtac 13390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17510446 - 17510354
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  17510446 cagaatacatattatttaattacaaggtcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccttattttaaattgtac 17510354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 43357022 - 43357113
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgct 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||||    
T  43357022 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactgct 43357113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 20130356 - 20130446
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| ||||||    
T  20130356 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactgc 20130446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34406490 - 34406400
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgt 91  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||    
T  34406490 cagaatacatattatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgt 34406400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43356865 - 43356955
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgt 91  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||    
T  43356865 cagaatacatattatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgt 43356955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 28876518 - 28876429
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  28876518 aatatatgttatttaattacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgtac 28876429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 34406334 - 34406245
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  34406334 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactg 34406245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 36381391 - 36381302
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||||||| |||||    
T  36381391 tcgatttatgactgtttatatattatgtcacatgtgaatttacaattaattttttgtctggtctccataaatttcctggctccgccactg 36381302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 40530200 - 40530289
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||| |||||    
T  40530200 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgctagggctccataaatttcctggctccgccactg 40530289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 50204294 - 50204202
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  50204294 cagaaaacctgttatttaattacagggccaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgtac 50204202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 13390498 - 13390403
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgctcacagt 260  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| |||| || |||||    
T  13390498 gatttatgactgttgatatattatgtcacatgtgaatttacgattaattttttgccagagcttcataaatttcctggctccgccactacttacagt 13390403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 13398765 - 13398675
Alignment:
Q  3 gaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||    
T  13398765 gaatacatgttatttaattacagagccaattttcagacttcacgtatattacatggtcaatttcaattgataatcctattttaaattgtac 13398675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 13013306 - 13013395
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  13013306 tcgatttatgactgtttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactg 13013395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 25931868 - 25931941
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaattt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  25931868 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgggctccataaattt 25931941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30076859 - 30076766
Alignment:
Q  1 cagaatacatgttatttaatt-acagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  30076859 cagaatacatgtgatttaatttacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaattgtac 30076766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36381555 - 36381467
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  36381555 cagaatacatgttatttaattacaag-tcaattttcagacttcacgtatattacgtggtcaattttaattaataaccctattttaaattg 36381467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 42332977 - 42332888
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  42332977 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtac 42332888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 43142789 - 43142700
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  43142789 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtac 43142700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 3292101 - 3292013
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||| ||||||||| ||||||||||||||||    
T  3292101 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgta 3292013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 29319408 - 29319317
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgctca 256  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||  ||||||||    
T  29319408 gatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccgggctccataaatttcctggctccgcaactgctca 29319317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 13398609 - 13398527
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctcc 245  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||    
T  13398609 tcgatttatgactgttgatatattatgtcacatgtgaatttacgataaattttttgcccgaacttcataaatttcctggctcc 13398527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 37577711 - 37577801
Alignment:
Q  2 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| || ||||||||||||||||| |||| |||||||||||    
T  37577711 agaatacatgttatttaattacaaggttaattttcagacttcatgtatattacatgatcaatttcaattaataatcctaatttaaattgta 37577801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 10352104 - 10352011
Alignment:
Q  1 cagaatacatgttatttaatt-acagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||  |||||||| ||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  10352104 cagaatacatgcgatttaatttacaaggtcaattttcagacttcatgtatattacatggtcaatttcaattaataaccctattttaaattgtac 10352011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 33135648 - 33135559
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||| |  ||||||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||    
T  33135648 aatacatgttatttaattacatgaccaattttcagacttcacatatattacatggtcaatttcaattaataatcctattttaaattgtac 33135559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 47501890 - 47501979
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  47501890 tcgatttatgattgtttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactg 47501979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 6689441 - 6689353
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||| || ||||||| ||||||||| ||||||||||||||||    
T  6689441 aatacatgttatttaattacagggccaattttcagactttacatatattacatggtcaattttaattaataatcctattttaaattgta 6689353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 33135483 - 33135403
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctcc 245  Q
    |||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||    
T  33135483 gatttatgactgttgatatattatgtcacatgtgaatttgtgataaattttttgtccgagctccataaattttctggctcc 33135403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 35546914 - 35547002
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| ||||||||| ||||||||||||||||    
T  35546914 aatacatgttatttaattacatggccaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgta 35547002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 29995047 - 29994961
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||||||||||||||| | |||||||||| |||||||| |||| ||||||||||||||||| ||||| ||||    
T  29995047 gatttatgactgtttatatattatgtcacatataaatttacgatcaattttttatccgggctccataaatttcctgactccgccact 29994961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 30110931 - 30111013
Alignment:
Q  12 ttatttaattacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| ||||||| |||||||||||||||    
T  30110931 ttatttaattacagggtcaatttttcagacttcacgtatattacatggtcaatttcaatcaataaccatattttaaattgtac 30111013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 29995206 - 29995121
Alignment:
Q  5 atacatgttatttaatt-acagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaatt 89  Q
    |||||||| |||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  29995206 atacatgtgatttaatttacggggtcaattttcagacttcacgtatattacatggtcaatttcaattaataatcctattttaaatt 29995121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 30215950 - 30215861
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| ||||||||| ||||||| |||||||||    
T  30215950 aatacatgttatttaattacaaggccaattttcagacttcacatatattacatggtcaattttaattaataatcctatttgaaattgtac 30215861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 50204135 - 50204046
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||  | ||||||||||||||||||||||||| |||||    
T  50204135 tcgatttatgactgttgatatattatgtcacatgtaaatttgcgataaatttttttcctgagctccataaatttcctggctccgccactg 50204046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 20130197 - 20130281
Alignment:
Q  9 atgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| |  | ||||| |||||||||||||||||||||||||||    
T  20130197 atgtcatttaactacagggtcaattttcagacttcacgtatattacgtagttaatttaaattaataaccctattttaaattgtac 20130281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1818615 - 1818707
Alignment:
Q  1 cagaatacatgttatttaat-tacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||| |||| || |||| ||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  1818615 cagaatacatgtgattttatatacaaggttaattttcagacttcacgtatattacatggtcaatttcaattaataa-cctattttaaattgtac 1818707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 26449810 - 26449889
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctcc 245  Q
    |||||| | |||||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||||||||| |||||    
T  26449810 atttataattgtttatatattatctcacatgtgaatttgcgataaattttttgcccgagctccataaatttcctagctcc 26449889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 37577885 - 37577972
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    |||||||| |||||||||||||||||| |||||||||| |||| ||||||||| |||| ||||||||||||| |||| ||| ||||||    
T  37577885 atttatgattgtttatatattatgtcatatgtgaatttgcgataaattttttgcccgaactccataaatttcatggccccgtcactgc 37577972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 6236583 - 6236635
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttt 215  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6236583 tcgatttatgactgtttatatattatgtcacatatgaatttacgattaatttt 6236635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 44157751 - 44157830
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||| |||||| |||||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||||||| |||||    
T  44157751 atttataactgttgatatattatgtcacatgtgaatttgcgataaattttttgcccg-gctccataaatttcctgactccg 44157830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 48131096 - 48131184
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |||| | ||||||| ||   |||||||||||||||||||||| ||||    
T  48131096 tcgatttatgaatgtttatatattatgtcacatgttaatttgcgataatttttttgcccagactccataaatttcctggctccgccact 48131184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 10351955 - 10351871
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||||||||  |||||||||| || |||| ||||||| | ||| ||||||||||||||||||||||| ||||    
T  10351955 gatttatgactgtttatatattat--cacatgtgaagttgcgataaatttttcgcccgggctccataaatttcctggctccgccact 10351871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 29319531 - 29319468
Alignment:
Q  30 aattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||    
T  29319531 aattttcagacttcaggtatattacgttgtcaatttcaattaataaccctattttaaattgtac 29319468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 1818790 - 1818877
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||| |  |||||||||||||  ||| ||||||| | ||| |||| |||||||||||||||||| |||||    
T  1818790 tcgatttatgactgtttatatatttt--cacatgtgaatttgtgataaatttttcgcccgtgctctataaatttcctggctccgccactg 1818877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 30076691 - 30076612
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||| ||||||||||||||  |||||||||||| || |||| |||||||  ||||||||||||||||||| ||||||||    
T  30076691 gatttataactgtttatatatt--gtcacatgtgaagttgcgataaatttttcatccgagctccataaatttcttggctccg 30076612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 48130989 - 48131059
Alignment:
Q  19 attacagggtcaatttt-cagacttcacgtatattacttgttcaatttcaattaataaccctattttaaat 88  Q
    |||||| |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||||    
T  48130989 attacatggtcaatttttcagacttaacgtatattacatggtcaatttcaattaataaccctatttaaaat 48131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 12211174 - 12211085
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||| ||||||||| || | |||  |||| ||| |||||||| |||||    
T  12211174 tcgatttatgattatttatatattatgtcacatgtgaatttgcgataaattttttgcccaaactctgtaaaattcatggctccgccactg 12211085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48130939 - 48131004
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaa-ttttcagacttcacgtatattacttgttcaattt 65  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||||||| || |||||||    
T  48130939 cagaatacatgttatttaattacatggtcaatttttcagacttcgcgtatattacatggtcaattt 48131004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 29132198 - 29132134
Alignment:
Q  20 ttacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctatttt 84  Q
    |||||| |||| |||||||||||| |||||||||| || ||||||||||| | ||||||||||||    
T  29132198 ttacagtgtcatttttcagacttcgcgtatattacatgatcaatttcaataattaaccctatttt 29132134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 53692982 - 53692899
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    ||||||||||||| ||||||||||||||| ||||||||||| | |||||  |||||||| | ||| ||||| ||| | ||||||    
T  53692982 tcgatttatgactatttatatattatgtcgcatgtgaatttgcaattaaaattttgtccaaactcgataaaattcttagctccg 53692899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 7769525 - 7769608
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||| || |||||||      |||| |||||||| || ||||||| |||||||||  ||||||||||||||||    
T  7769525 aatacatgttatttaattacatggccaatttt------tcacatatattacatggtcaattttaattaataattctattttaaattgtac 7769608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 31002673 - 31002635
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  31002673 gatttatgactatttatatattatgtcacatgtgaattt 31002635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 3239696 - 3239623
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||||||| || |||||||||| |  |||| ||||| |||  ||||||| |||||    
T  3239696 tatatattatgtcacatgtgaatttacaataaattttttgtgcaggctctataaaattctaggctccgccactg 3239623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26449684 - 26449717
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  26449684 cagaatacatgttatttaattacagggtcaattt 26449717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48990262 - 48990295
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  48990262 cagaatacatgttatttaattacagggtcaattt 48990295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 17359359 - 17359399
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  17359359 tcgatttatgattatttatatattatgtcacatgtgaattt 17359399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 24104546 - 24104514
Alignment:
Q  169 tatgactgtttatatattatgtcacatgtgaat 201  Q
    |||||||||||||||||||||||||||||||||    
T  24104546 tatgactgtttatatattatgtcacatgtgaat 24104514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 5517006 - 5516931
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgct 254  Q
    ||||||||||||||||||||||||| |||| ||||||| | ||  |||| ||  | |||||||||||| |||||||    
T  5517006 tatatattatgtcacatgtgaatttgcgataaatttttcgcccaggctctatgtagttcctggctccgccactgct 5516931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 6689269 - 6689214
Alignment:
Q  199 aatttacgattaattttttgtccgagctccataaatttcctggctccgacactgct 254  Q
    |||||| ||| ||||||| | ||| ||||||||||||||||||||||| |||||||    
T  6689269 aatttaggataaatttttcgcccgggctccataaatttcctggctccgccactgct 6689214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 28876360 - 28876277
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||| ||| ||| |||||||||||||| | ||| | || ||||||||| ||||  | |||||||||||| ||||||    
T  28876360 tcgatttatgaccgttgatacattatgtcacatgtaattttgcaataaattttttgcccgaatttcataaatttcctcgctccg 28876277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 3074596 - 3074638
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttac 205  Q
    ||||||||||||| |||||||||||||||  ||||||||||||    
T  3074596 tcgatttatgactatttatatattatgtcgtatgtgaatttac 3074638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 25931670 - 25931700
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaa 31  Q
    |||||||||||||||||||||||||||||||    
T  25931670 cagaatacatgttatttaattacagggtcaa 25931700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 48990289 - 48990323
Alignment:
Q  59 tcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||| ||||||||||||||||    
T  48990289 tcaatttcaattaataactctattttaaattgtac 48990323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 6211603 - 6211566
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  6211603 tatatattatgtcacatgtgaatttgcgataaattttt 6211566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 12679784 - 12679747
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  12679784 tatatattatgtcacatgtgaatttgcgataaattttt 12679747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 37236190 - 37236153
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  37236190 tatatattatgtcacatgtgaatttgcgataaattttt 37236153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 49908289 - 49908252
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  49908289 tatatattatgtcacatgtgaatttgcgataaattttt 49908252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 7769695 - 7769747
Alignment:
Q  199 aatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    |||||| ||| ||||||| | ||| ||||||||||||||||||||||| ||||    
T  7769695 aatttaggataaatttttcgcccgggctccataaatttcctggctccgccact 7769747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 48991424 - 48991483
Alignment:
Q  178 ttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcc 238  Q
    ||||||||||| ||||||||||||||   || ||||||||||| | |||||||||||||||    
T  48991424 ttatatattatctcacatgtgaatttgtaataaattttttgtcag-gctccataaatttcc 48991483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 479663 - 479571
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  479663 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 479571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 479506 - 479417
Alignment:
Q  164 cgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| ||||||    
T  479506 cgatttatgactgtttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactgc 479417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 435297 - 435257
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  435297 tcgatttataactatttatatattatgtcacatgtgaattt 435257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24019597 - 24019505
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  24019597 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 24019505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28524159 - 28524251
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  28524159 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 28524251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 39915475 - 39915567
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||    
T  39915475 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacgtggttaatttaaattaataaccctattttaaattgtac 39915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 40470075 - 40469982
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttc-agacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  40470075 cagaatacatgttatttaattacagggtcaattttttagacttcacgtatattacatggtcaatttcaattaataaccctattttaaattgtac 40469982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 29727434 - 29727351
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  29727434 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccggactccataaatttcctggctccg 29727351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 3647995 - 3647906
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||  || |||||||||||||||||||||||||||||||||||    
T  3647995 aatacatgttatttaattacagggtaaattttcagacttcatgtatattatgtggtcaatttcaattaataaccctattttaaattgtac 3647906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 28524312 - 28524401
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  28524312 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactg 28524401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 29727588 - 29727499
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  29727588 aatacatgttatttaattacaatgtcaattttcagacttcacatatattacgtggtcaatttcaattaataaccctattttaaattgtac 29727499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 34136009 - 34135920
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  34136009 aatacatgttatttaattacagggtcaattttcagacttcacatatattacatggtcaattttaattaataatcctattttaaattgtac 34135920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 7278987 - 7279078
Alignment:
Q  2 agaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||  || ||||||||||||||||| | |||||||||||||||    
T  7278987 agaatacatgttatttaattacagggccaattttcagacttcacgtatattatatgatcaatttcaattaataatcttattttaaattgtac 7279078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 29632502 - 29632593
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgct 254  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||||    
T  29632502 tcgatttatgactgtttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactgct 29632593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 39915628 - 39915719
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgct 254  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||||    
T  39915628 tcgatttatgactatttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactgct 39915719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 27046930 - 27047020
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||| |||||||| |||||||||||||| ||||||    
T  27046930 tcgatttatgactgtttatatattatgtcacatgtaaatttgcgataaattttttgcccgggctccatatatttcctggctccgccactgc 27047020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 24019444 - 24019355
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||| |||||    
T  24019444 tcgatttatgactatttatatattatatcacatgtgaatttacgattaatttttcgcccaggctccataaatttcctggctccgccactg 24019355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36409444 - 36409536
Alignment:
Q  1 cagaatacatgttatttaatt-acagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  36409444 cagaatacatgtgatttaatttacaaggtcaattttcagacttcacgtatattacatggtcaatttcaattaataa-cctattttaaattgtac 36409536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9878180 - 9878251
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  9878180 cagaatacatgttatttaattacagggtcaattttcagacttcatgtatattacatggtcaatttcaattaa 9878251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 4404971 - 4405060
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || | ||||| ||||||||| | |||||||||||||||    
T  4404971 aatacatgttatttaattacagggccaattttcagacttcacatatattacatggttaattttaattaataatcttattttaaattgtac 4405060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 16787229 - 16787140
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||  ||||||| ||||||||| |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  16787229 aatacatgttatttaattacaggaccaatttttagacttcacatatattacatggtcaattttaattaataagcctattttaaattgtac 16787140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 3436196 - 3436286
Alignment:
Q  4 aatacatgttatttaattacagggtcaat-tttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||| | |||| ||||||| ||||||||||||||||| |||  || |||||||||||||||||||||||||||||||||||    
T  3436196 aatacatgttattttactacatggtcaatgtttcagacttcacgtatcttatatggtcaatttcaattaataaccctattttaaattgtac 3436286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 23403031 - 23403120
Alignment:
Q  4 aatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||| ||||||||||||||||||  ||||||||||||||||| |||| ||| || ||||||| ||||||||| |||||||||||||||||    
T  23403031 aataaatgttatttaattacaggaccaattttcagacttcacatataatacatggtcaattttaattaataatcctattttaaattgtac 23403120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 3647829 - 3647754
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctgg 241  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  3647829 gatttataactgtttatatattatg-cacatgtgaatttacgattaattttttgcccggactccataaatttcctgg 3647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15839233 - 15839326
Alignment:
Q  1 cagaatacatgttatttaa----ttacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattg 90  Q
    |||||||||||||||||||    ||||||||||||||||||||||| | ||||||||| || ||||||| ||||||||| ||||||||||||||    
T  15839233 cagaatacatgttatttaattaattacagggtcaattttcagactttaagtatattacgtggtcaattttaattaataatcctattttaaattg 15839326  T

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Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 40469949 - 40469866
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccg 246  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||| ||||| |||  |||||||||||| |||||||||    
T  40469949 tcgatttatgactgtttatatattatatcgcatgtgaatttacgataaatattttgcccggactccataaattttctggctccg 40469866  T

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Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 3436320 - 3436408
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||  |||| ||   ||||||||||||| |||||||| ||||    
T  3436320 tcgatttatgactgtttatatattatgtcacatgtgaatttgcgataaatgatttgccctgactccataaatttcttggctccggcact 3436408  T

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Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 23403188 - 23403275
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| || ||||||||||||||||||||||||  ||  ||  ||| | ||||||||||||||||||||||||||| |||||    
T  23403188 gatttatgactattgatatattatgtcacatgtgaatttgggaaaaaaatttcgcccgagctccataaatttcctggctccgccactg 23403275  T

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Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 36409616 - 36409704
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactgc 253  Q
    |||||||||||||||||||||||| |  ||||||||||||| |||| ||||||| | ||| |||| ||||||||||| |||||| ||||||    
T  36409616 tcgatttatgactgtttatatatttt--cacatgtgaatttgcgataaatttttcgcccgggctctataaatttcctagctccgccactgc 36409704  T

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Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 7279154 - 7279240
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||| |||| |||||||||||| ||||||||||| |||| ||||||||| || | |||||||||||||| | ||||| |||||    
T  7279154 atttatgattgttgatatattatgtcgcatgtgaatttgcgataaattttttgcccaatctccataaatttccagactccgccactg 7279240  T

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Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 15839401 - 15839454
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttt 216  Q
    |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  15839401 tcgattcatgactgtttatatattatgtcacatttgaatttactattaattttt 15839454  T

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Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 42447151 - 42447196
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  42447151 tcgatttatgactgtttatatattatgtcacatgtgaatttgcgat 42447196  T

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Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 24592285 - 24592196
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||  |||||| |||||||||||||||||||||| ||||  |||||  |  |||| ||||| |||||||||||| |||||    
T  24592285 tcgatttatgactaattatatgttatgtcacatgtgaatttacggttaaaattttgctcaggctctataaaattcctggctccgccactg 24592196  T

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Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 21958739 - 21958830
Alignment:
Q  163 tcgatttatgactgtttata--tattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||| ||||||  ||||||||||||| ||||||| |||| || |||||| || ||||| ||||| ||||| |||||| |||||    
T  21958739 tcgatttatgactatttatatatattatgtcacatatgaatttgcgataaactttttgcccaagctctataaaattcctagctccgccactg 21958830  T

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Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 42232021 - 42232108
Alignment:
Q  165 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||| |||||||||||||| | |||| | |||||||||| ||||||||| ||   |||||||||||  ||||||||| |||||    
T  42232021 gatttatgattgtttatatattatcttacatataaatttacgataaattttttgcccagactccataaattatctggctccgccactg 42232108  T

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Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 5637640 - 5637567
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||||||||||||||| |||| ||||||| | || ||||| ||  | |||||||||||| |||||    
T  5637640 tatatattatgtcacatgtgaatttgcgataaatttttcgcccaagctctatgtaattcctggctccgccactg 5637567  T

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Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 28846832 - 28846873
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattta 204  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  28846832 tcgatttatgactatttatatattatatcacatgtgaattta 28846873  T

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Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 24333944 - 24333984
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  24333944 tcgatttatgactatttatatattatatcacatgtgaattt 24333984  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 2727999 - 2727965
Alignment:
Q  59 tcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||||| |||||||||||||||    
T  2727999 tcaatttcaattaataaccgtattttaaattgtac 2727965  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 34
Target Start/End: Complemental strand, 2728023 - 2727993
Alignment:
Q  4 aatacatgttatttaattacagggtcaattt 34  Q
    |||||||||||||||||||||||||||||||    
T  2728023 aatacatgttatttaattacagggtcaattt 2727993  T

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Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 34
Target Start/End: Original strand, 42231900 - 42231930
Alignment:
Q  4 aatacatgttatttaattacagggtcaattt 34  Q
    |||||||||||||||||||||||||||||||    
T  42231900 aatacatgttatttaattacagggtcaattt 42231930  T

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Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 42231924 - 42231958
Alignment:
Q  59 tcaatttcaattaataaccctattttaaattgtac 93  Q
    ||||||||||||||||| |||||||||||||||||    
T  42231924 tcaatttcaattaataatcctattttaaattgtac 42231958  T

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Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 17839572 - 17839609
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  17839572 tatatattatgtcacatgtgaatttgcgataaattttt 17839609  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 27191001 - 27191038
Alignment:
Q  166 atttatgactgtttatatattatgtcacatgtgaattt 203  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  27191001 atttatgactatttatatattatgtcatatgtgaattt 27191038  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 10467978 - 10468018
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaattt 203  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  10467978 tcgatttatgactatttatatattatttcgcatgtgaattt 10468018  T

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Target: scaffold0069 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 18684 - 18773
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||    
T  18684 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccgggctccataaatttcatggctccgccactg 18773  T

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Target: scaffold0069; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 18522 - 18611
Alignment:
Q  3 gaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgtac 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  18522 gaatacatgttatttaattacagg-tcaattttcagacttcacgtatattacgtggtcaatttcaattaataaccctatattaaattgtac 18611  T

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Target: scaffold0154 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 32175 - 32266
Alignment:
Q  1 cagaatacatgttatttaattacagggtcaattttcagacttcacgtatattacttgttcaatttcaattaataaccctattttaaattgta 92  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  32175 cagaatacatgttatttaattatagggtaaattttcaggcttcacgtatattacatggtcaatttcaattaataaccctattttaaattgta 32266  T

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Target: scaffold0154; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 32300 - 32388
Alignment:
Q  163 tcgatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||| |||||||||||||||||| | |||||||| ||| ||| |||||  ||| ||||||||||||||||||||||| |||||    
T  32300 tcgatttatgattgtttatatattatgtcataagtgaatttgcga-taaatttttacccgggctccataaatttcctggctccgccactg 32388  T

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Target: scaffold0178 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 22011 - 21945
Alignment:
Q  185 ttatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||| |||| ||||||||| | | ||||||||||||||||||||||| ||||    
T  22011 ttatgtcacatgtgaatttgcgataaattttttgcctgggctccataaatttcctggctccgccact 21945  T

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Target: scaffold0178; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 27513 - 27447
Alignment:
Q  185 ttatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacact 251  Q
    ||||||||||||||||||| |||| ||||||||| | | ||||||||||||||||||||||| ||||    
T  27513 ttatgtcacatgtgaatttgcgataaattttttgcctgggctccataaatttcctggctccgccact 27447  T

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Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 214109 - 214018
Alignment:
Q  163 tcgatttatgactgtttatatat--tatgtcacatgtgaatttacgattaattttttgtccgagctccataaatttcctggctccgacactg 252  Q
    ||||||||||||| |||||||||  |||||||||| ||||||| |||| || |||||| || ||||| ||||| ||||| |||||| |||||    
T  214109 tcgatttatgactatttatatatattatgtcacatatgaatttgcgataaactttttgcccaagctctataaaattcctagctccgccactg 214018  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 134784 - 134747
Alignment:
Q  179 tatatattatgtcacatgtgaatttacgattaattttt 216  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  134784 tatatattatgtcacatgtgaatttgcgataaattttt 134747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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