View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19918_low_13 (Length: 255)
Name: NF19918_low_13
Description: NF19918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19918_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 25994348 - 25994591
Alignment:
| Q |
1 |
ccaccattctccacactctctgcaactccaaccgtttcgaagaagcccatcaacgtttctctctcttcctctcctccggttcaatccccgatcaccgaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
25994348 |
ccaccattctccacactctctgcaactccaaccgtttcgaagaagcccatcaacgtttctctctcttcctctcctccggttcaatccctgatcaccgaac |
25994447 |
T |
|
| Q |
101 |
atgcaaccttctcctcgcaaagttactccattccaaaaccccatttcaaacatggtctctcgttaaatcattgatccaaatcaaagctggttttgttcct |
200 |
Q |
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||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25994448 |
ctgcaaccttctcctcgctaagctactccgttccaaaaccccatttcaaacatggtctctcgttaaatcattgatccaaatcaaagctggttttgttcct |
25994547 |
T |
|
| Q |
201 |
tctttggttaactacaatcgtttgatggaccatttttgcttcat |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25994548 |
tctttggttaactacaatcgtttgatggaccatttttgcttcat |
25994591 |
T |
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